Citrus Sinensis ID: 036266
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 312 | 2.2.26 [Sep-21-2011] | |||||||
| C0LGP4 | 1010 | Probable LRR receptor-lik | no | no | 0.955 | 0.295 | 0.301 | 3e-30 | |
| Q9ZUI0 | 980 | Putative leucine-rich rep | no | no | 0.923 | 0.293 | 0.303 | 4e-30 | |
| Q9SGP2 | 996 | Receptor-like protein kin | no | no | 0.907 | 0.284 | 0.282 | 1e-29 | |
| P47735 | 999 | Receptor-like protein kin | no | no | 0.919 | 0.287 | 0.310 | 4e-27 | |
| C0LGT6 | 1031 | LRR receptor-like serine/ | no | no | 0.913 | 0.276 | 0.301 | 4e-27 | |
| C0LGX1 | 607 | Probable LRR receptor-lik | no | no | 0.951 | 0.489 | 0.304 | 3e-26 | |
| C0LGX3 | 993 | LRR receptor-like serine/ | no | no | 0.903 | 0.283 | 0.292 | 6e-26 | |
| Q8LPS5 | 601 | Somatic embryogenesis rec | no | no | 0.910 | 0.472 | 0.287 | 5e-24 | |
| Q9SD62 | 1025 | Putative receptor-like pr | no | no | 0.483 | 0.147 | 0.382 | 2e-23 | |
| Q9FL28 | 1173 | LRR receptor-like serine/ | no | no | 0.544 | 0.144 | 0.349 | 2e-23 |
| >sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 174/371 (46%), Gaps = 73/371 (19%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQN--------------------LKVLIGL---DLSINR 37
L+ + ++L N LSG LP + N LK L+G+ DLS N
Sbjct: 504 LQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDIPDLKGLVGVKEVDLSNND 563
Query: 38 LYGDIPITISGLKDLTTLFLAGNRSQGSIPKS--FESLASLEFLDLSSNNLSGKI----- 90
L G IP + L L L+ N +G +P FE+ ++ + +N+L G I
Sbjct: 564 LSGSIPEYFASFSKLEYLNLSFNNLEGKVPVKGIFENATTVSIV--GNNDLCGGIMGFQL 621
Query: 91 -PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQDSKRT------ 143
P +A S +K+ + ++ + + + ++ L + +K T
Sbjct: 622 KPCLSQAPSVVKKHSSRLKKVVIGVSVGITLLLLLFMASVTLIWLRKRKKNKETNNPTPS 681
Query: 144 ---------SYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNV-AIKVFNLQLERAF 193
SY D+ AT+ F+ +++G+ S G+VYK + L E V A+KV N+Q A
Sbjct: 682 TLEVLHEKISYGDLRNATNGFSSSNMVGSGSFGTVYKALLLTEKKVVAVKVLNMQRRGAM 741
Query: 194 RSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV---MPNGDFP----------- 239
+SF ++CE K++RHRNL+K+LT + + + + + MPNG
Sbjct: 742 KSFMAECESLKDIRHRNLVKLLTACSSIDFQGNEFRALIYEFMPNGSLDMWLHPEEVEEI 801
Query: 240 ----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
ERLNI ID+A +YLH P+ HCDLKPSN LLD+D+ AHVSDF ++
Sbjct: 802 HRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLA 861
Query: 290 KLLGVLLPETF 300
+LL E+F
Sbjct: 862 RLLLKFDEESF 872
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 164/352 (46%), Gaps = 64/352 (18%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
++ +L ++L SN LSG +P + + L L+LS N +P ++ L L L ++ N
Sbjct: 466 MDMVLSVDLSSNELSGKIPPQLGSCIALEHLNLSRNGFSSTLPSSLGQLPYLKELDVSFN 525
Query: 61 RSQGSIPKSFESLASLEFLDLS----SNNLSGKIPKSLEALSNLKELNVSYNRLEG---- 112
R G+IP SF+ ++L+ L+ S S N+S K S + + ++ ++G
Sbjct: 526 RLTGAIPPSFQQSSTLKHLNFSFNLLSGNVSDKGSFSKLTIESFLGDSLLCGSIKGMQAC 585
Query: 113 ------------------EIPTNVPFGN--FSSQSFISNYALCAHQDSK----------- 141
P FG F N + A ++ +
Sbjct: 586 KKKHKYPSVLLPVLLSLIATPVLCVFGYPLVQRSRFGKNLTVYAKEEVEDEEKQNQNDPK 645
Query: 142 --RTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR-SFDS 198
R SY ++ AT FN L+G+ G VYK + + T VA+KV + + F SF
Sbjct: 646 YPRISYQQLIAATGGFNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKR 705
Query: 199 KCEVHKNVRHRNLIKILTTIAILILKPWY--LSSCVMPNG----------------DFPE 240
+C++ K RHRNLI+I+TT + KP + L +MPNG D +
Sbjct: 706 ECQILKRTRHRNLIRIITTCS----KPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQ 761
Query: 241 RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+NI D+A YLHH +VHCDLKPSN LLD++M A V+DF IS+L+
Sbjct: 762 LVNICSDVAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLV 813
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 166/379 (43%), Gaps = 96/379 (25%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ + Q++ N SGSLP ++ +L L LDL N+ G++ I K L L LA N
Sbjct: 467 LDNLNQLSASGNKFSGSLPDSLMSLGELGTLDLHGNQFSGELTSGIKSWKKLNELNLADN 526
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
G IP SL+ L +LDLS N SGKIP SL++L L +LN+SYNRL G++P ++
Sbjct: 527 EFTGKIPDEIGSLSVLNYLDLSGNMFSGKIPVSLQSL-KLNQLNLSYNRLSGDLPPSLA- 584
Query: 121 GNFSSQSFISNYALC--------AHQDSKRTSYL-------------------------- 146
+ SFI N LC + ++K+ Y+
Sbjct: 585 KDMYKNSFIGNPGLCGDIKGLCGSENEAKKRGYVWLLRSIFVLAAMVLLAGVAWFYFKYR 644
Query: 147 --------------------------DILQATDEFNEWHLLGTESLGSVYKWIFLDETNV 180
+IL++ DE N ++G + G VYK + + V
Sbjct: 645 TFKKARAMERSKWTLMSFHKLGFSEHEILESLDEDN---VIGAGASGKVYKVVLTNGETV 701
Query: 181 AIKVF---------NLQLERAFR------SFDSKCEVHKNVRHRNLIKILTTIAILILKP 225
A+K + E+ ++ +F+++ E +RH+N++K+ + K
Sbjct: 702 AVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCK- 760
Query: 226 WYLSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271
L MPNG + R I++D A YLHH P+VH D+K +
Sbjct: 761 -LLVYEYMPNGSLGDLLHSSKGGMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSN 819
Query: 272 NNLLDEDMVAHVSDFNISK 290
N L+D D A V+DF ++K
Sbjct: 820 NILIDGDYGARVADFGVAK 838
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P47735|RLK5_ARATH Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 160/374 (42%), Gaps = 87/374 (23%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L I++I+ N SG +P ++ LK L LDLS N+L G+IP + G K+L L LA N
Sbjct: 474 LNGIIEISGAENDFSGEIPESLVKLKQLSRLDLSKNQLSGEIPRELRGWKNLNELNLANN 533
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
G IPK L L +LDLSSN SG+IP L+ L L LN+SYN L G+IP +
Sbjct: 534 HLSGEIPKEVGILPVLNYLDLSSNQFSGEIPLELQNL-KLNVLNLSYNHLSGKIPP-LYA 591
Query: 121 GNFSSQSFISNYALCAHQD--------SKRTSYLDIL----------------------- 149
+ FI N LC D SK Y+ IL
Sbjct: 592 NKIYAHDFIGNPGLCVDLDGLCRKITRSKNIGYVWILLTIFLLAGLVFVVGIVMFIAKCR 651
Query: 150 --------------------------QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIK 183
+ D +E +++G S G VYK VA+K
Sbjct: 652 KLRALKSSTLAASKWRSFHKLHFSEHEIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVK 711
Query: 184 VFNLQLERA---FRS-------FDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233
N ++ + S F ++ E +RH++++++ + K L M
Sbjct: 712 KLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCK--LLVYEYM 769
Query: 234 PNGD----------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277
PNG +PERL I +D A YLHH P+VH D+K SN LLD
Sbjct: 770 PNGSLADVLHGDRKGGVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDS 829
Query: 278 DMVAHVSDFNISKL 291
D A V+DF I+K+
Sbjct: 830 DYGAKVADFGIAKV 843
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Receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates that controls floral organ abscission. May interact with the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) ligands family. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1 | Back alignment and function description |
|---|
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 57/342 (16%)
Query: 11 SNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF 70
NS G++P +I L L +D S N L G IP ++ L L L L+ N+ +G +P +
Sbjct: 546 GNSFDGAIP-DISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTG 604
Query: 71 ESLASLEFLDLSSNNLSGKI------PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ + N+ G + P ++A S K +S + ++ + + G S
Sbjct: 605 VFRNATAVSVFGNTNICGGVREMQLKPCIVQA-SPRKRKPLSVRK---KVVSGICIGIAS 660
Query: 125 SQSFISNYALCAHQDSKR---------------------TSYLDILQATDEFNEWHLLGT 163
I +LC K+ SY ++ AT F+ +L+G+
Sbjct: 661 LLLIIIVASLCWFMKRKKKNNASDGNPSDSTTLGMFHEKVSYEELHSATSRFSSTNLIGS 720
Query: 164 ESLGSVYKWIFLDETN-VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222
+ G+V+K + E VA+KV NL A +SF ++CE K +RHRNL+K++T + L
Sbjct: 721 GNFGNVFKGLLGPENKLVAVKVLNLLKHGATKSFMAECETFKGIRHRNLVKLITVCSSLD 780
Query: 223 LKPWYLSSCV---MPNGDF---------------------PERLNIMIDMALAFEYLHHG 258
+ + V MP G E+LNI ID+A A EYLH
Sbjct: 781 SEGNDFRALVYEFMPKGSLDMWLQLEDLERVNDHSRSLTPAEKLNIAIDVASALEYLHVH 840
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETF 300
P+ HCD+KPSN LLD+D+ AHVSDF +++LL E+F
Sbjct: 841 CHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLYKYDRESF 882
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Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGX1|Y5524_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g65240 OS=Arabidopsis thaliana GN=At5g65240 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 164/361 (45%), Gaps = 64/361 (17%)
Query: 11 SNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF 70
N + G +P +I NL L LDL N L IP T+ LK+L L L+ N GSIP S
Sbjct: 97 GNGIMGGIPESIGNLSSLTSLDLEDNHLTDRIPSTLGNLKNLQFLTLSRNNLNGSIPDSL 156
Query: 71 ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE--GEIP------------- 115
L+ L + L SNNLSG+IP+S L + + N + N L G P
Sbjct: 157 TGLSKLINILLDSNNLSGEIPQS---LFKIPKYNFTANNLSCGGTFPQPCVTESSPSGDS 213
Query: 116 ----TNVPFGNFSSQSFI----SNYALC--AHQDSKRTSYLDI----------------- 148
T + G S + I + C H+ KR ++D+
Sbjct: 214 SSRKTGIIAGVVSGIAVILLGFFFFFFCKDKHKGYKRDVFVDVAGEVDRRIAFGQLRRFA 273
Query: 149 ---LQ-ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIK-VFNLQLERAFRSFDSKCEVH 203
LQ ATDEF+E ++LG G VYK + D T VA+K + + + +F + E+
Sbjct: 274 WRELQLATDEFSEKNVLGQGGFGKVYKGLLSDGTKVAVKRLTDFERPGGDEAFQREVEMI 333
Query: 204 KNVRHRNLIKIL----TTIAILILKPWY----LSSCVM------PNGDFPERLNIMIDMA 249
HRNL++++ T L++ P+ ++ C+ P D+ R I + A
Sbjct: 334 SVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYCLREIKPGDPVLDWFRRKQIALGAA 393
Query: 250 LAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPTIEM 309
EYLH + ++H D+K +N LLDED A V DF ++KL+ V T+ + T+
Sbjct: 394 RGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGH 453
Query: 310 I 310
I
Sbjct: 454 I 454
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGX3|HSL2_ARATH LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 154/359 (42%), Gaps = 77/359 (21%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I+L NS GS+PS I LK L +++ N L G+IP ++S +LT L L+ NR +G I
Sbjct: 488 IDLSRNSFLGSIPSCINKLKNLERVEMQENMLDGEIPSSVSSCTELTELNLSNNRLRGGI 547
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P L L +LDLS+N L+G+IP L L L + NVS N+L G+IP+ F
Sbjct: 548 PPELGDLPVLNYLDLSNNQLTGEIPAELLRLK-LNQFNVSDNKLYGKIPSGFQQDIFRP- 605
Query: 127 SFISNYALCA--------------------------------------------HQDSKR 142
SF+ N LCA + KR
Sbjct: 606 SFLGNPNLCAPNLDPIRPCRSKRETRYILPISILCIVALTGALVWLFIKTKPLFKRKPKR 665
Query: 143 TSYLDILQATD--------EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR 194
T+ + I Q + E +++G+ G VY+ +A+K + +
Sbjct: 666 TNKITIFQRVGFTEEDIYPQLTEDNIIGSGGSGLVYRVKLKSGQTLAVKKLWGETGQKTE 725
Query: 195 S---FDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG--------------- 236
S F S+ E VRH N++K+L + +L M NG
Sbjct: 726 SESVFRSEVETLGRVRHGNIVKLLMCCNGEEFR--FLVYEFMENGSLGDVLHSEKEHRAV 783
Query: 237 ---DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
D+ R +I + A YLHH P+VH D+K +N LLD +M V+DF ++K L
Sbjct: 784 SPLDWTTRFSIAVGAAQGLSYLHHDSVPPIVHRDVKSNNILLDHEMKPRVADFGLAKPL 842
|
Receptor-like serine/threonine-kinase acting on substrates that controls floral organ abscission. Regulated by the 'INFLORESCENCE DEFICIENT IN ABSCISSION' (IDA) family of ligands. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8LPS5|SERK5_ARATH Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 163/331 (49%), Gaps = 47/331 (14%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ LF+N+++G +P + +L L+ LDL N + G IP ++ L L L L N G I
Sbjct: 99 LELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEI 158
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P+S +L L+ LD+S+N LSG IP + + S ++ + N+L + P + +S
Sbjct: 159 PRSLTALP-LDVLDISNNRLSGDIPVN-GSFSQFTSMSFANNKLRPRPASPSPSPSGTSA 216
Query: 127 SFISNYA-----------------------LCAHQDS-------KRTSYLDILQATDEFN 156
+ + A + A +D KR S ++L AT++F+
Sbjct: 217 AIVVGVAAGAALLFALAWWLRRKLQGHFLDVPAEEDPEVYLGQFKRFSLRELLVATEKFS 276
Query: 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR-SFDSKCEVHKNVRHRNLIKI- 214
+ ++LG G +YK D+T VA+K N + + F ++ E+ HRNL+++
Sbjct: 277 KRNVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLR 336
Query: 215 ---LTTIAILILKPWY----LSSCVM--PNG----DFPERLNIMIDMALAFEYLHHGRST 261
+T L++ P+ ++SC+ P G D+P+R +I + A YLH
Sbjct: 337 GFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQ 396
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H D+K +N LLDE+ A V DF ++KL+
Sbjct: 397 KIIHLDVKAANILLDEEFEAVVGDFGLAKLM 427
|
Serine/threonine-kinase of unknown function. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 27/178 (15%)
Query: 141 KRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDS 198
++ SY ++ + T F+ +L+G+ + G+V+K FL N VAIKV NL A +SF +
Sbjct: 705 EKISYDELYKTTGGFSSSNLIGSGNFGAVFKG-FLGSKNKAVAIKVLNLCKRGAAKSFIA 763
Query: 199 KCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV---MPNGDF-----PE---------- 240
+CE +RHRNL+K++T + + + V MPNG+ P+
Sbjct: 764 ECEALGGIRHRNLVKLVTICSSSDFEGNDFRALVYEFMPNGNLDMWLHPDEIEETGNPSR 823
Query: 241 ------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
RLNI ID+A A YLH P+ HCD+KPSN LLD+D+ AHVSDF +++LL
Sbjct: 824 TLGLFARLNIAIDVASALVYLHTYCHNPIAHCDIKPSNILLDKDLTAHVSDFGLAQLL 881
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 102/189 (53%), Gaps = 19/189 (10%)
Query: 141 KRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQ--LERAFRSFDS 198
KR ++ QATD FN +++G+ SL +VYK D T +A+KV NL+ + + F +
Sbjct: 856 KRFEPKELEQATDSFNSANIIGSSSLSTVYKGQLEDGTVIAVKVLNLKEFSAESDKWFYT 915
Query: 199 KCEVHKNVRHRNLIKIL-------TTIAILILKPWY--------LSSCVMPNGDFPERLN 243
+ + ++HRNL+KIL T A+++ P+ + P G E+++
Sbjct: 916 EAKTLSQLKHRNLVKILGFAWESGKTKALVL--PFMENGNLEDTIHGSAAPIGSLLEKID 973
Query: 244 IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRK 303
+ + +A +YLH G P+VHCDLKP+N LLD D VAHVSDF +++LG + T
Sbjct: 974 LCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTAS 1033
Query: 304 KPTIEMIIG 312
E IG
Sbjct: 1034 TSAFEGTIG 1042
|
Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 312 | ||||||
| 298204751 | 1979 | unnamed protein product [Vitis vinifera] | 0.990 | 0.156 | 0.477 | 8e-80 | |
| 296085726 | 932 | unnamed protein product [Vitis vinifera] | 0.993 | 0.332 | 0.459 | 2e-71 | |
| 359485453 | 1202 | PREDICTED: probable LRR receptor-like se | 0.990 | 0.257 | 0.414 | 7e-70 | |
| 255578886 | 1043 | serine-threonine protein kinase, plant-t | 0.926 | 0.277 | 0.423 | 3e-69 | |
| 359485121 | 1469 | PREDICTED: probable LRR receptor-like se | 0.958 | 0.203 | 0.388 | 5e-69 | |
| 147853795 | 1420 | hypothetical protein VITISV_005816 [Viti | 0.990 | 0.217 | 0.407 | 6e-68 | |
| 449523087 | 1037 | PREDICTED: LRR receptor-like serine/thre | 0.948 | 0.285 | 0.409 | 2e-67 | |
| 224116832 | 1061 | predicted protein [Populus trichocarpa] | 0.993 | 0.292 | 0.402 | 3e-65 | |
| 359485080 | 928 | PREDICTED: probable LRR receptor-like se | 0.983 | 0.330 | 0.378 | 3e-64 | |
| 147776333 | 1205 | hypothetical protein VITISV_000078 [Viti | 0.990 | 0.256 | 0.402 | 2e-63 |
| >gi|298204751|emb|CBI25249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 303 bits (775), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/373 (47%), Positives = 228/373 (61%), Gaps = 64/373 (17%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L +IL +++ SN L G LPS++ NLKVL+ +DLS N+L G+IP I GL+DLT+L LA N
Sbjct: 1040 LIHILSLDMSSNFLVGYLPSDMGNLKVLVKIDLSRNQLSGEIPSNIGGLQDLTSLSLAHN 1099
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
R +G I SF +L SLEF+DLS N L G+IPKSLE L LK L+VS+N L GEIP PF
Sbjct: 1100 RFEGPILHSFSNLKSLEFMDLSDNALFGEIPKSLEGLVYLKYLDVSFNGLYGEIPPEGPF 1159
Query: 121 GNFSSQSFISNYALCAHQDS--------------KRTSYLDILQATDEFNEWHLLGTESL 166
NFS++SF+ N ALC +++ +R SY +I QAT+ F+ +LLG SL
Sbjct: 1160 ANFSAESFMMNKALCRKRNAVLPTQSESLLTATWRRISYQEIFQATNGFSAGNLLGRGSL 1219
Query: 167 GSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226
GSVY+ D N AIKVFNLQ E AF+SFD++CEV ++RHRNLIKI+++ + +
Sbjct: 1220 GSVYRGTLSDGKNAAIKVFNLQEEAAFKSFDAECEVMHHIRHRNLIKIVSSCSNSYIDFK 1279
Query: 227 YLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273
L +PNG D +RLNIMID+ALA EYLHHG STP+VHCDLKPSN
Sbjct: 1280 ALVLEYVPNGSLERWLYSHNYCLDILQRLNIMIDVALAMEYLHHGCSTPVVHCDLKPSNI 1339
Query: 274 LLDEDMVAHVSDFNISKLL-------------------------------------GVLL 296
LLDED HV DF I+KLL G++L
Sbjct: 1340 LLDEDFGGHVGDFGIAKLLREEESIRETQTLATIGYMAPKYVSNGIVTTSGDVYSYGIVL 1399
Query: 297 PETFTRKKPTIEM 309
ETFTR++PT E+
Sbjct: 1400 METFTRRRPTDEI 1412
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296085726|emb|CBI29526.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/370 (45%), Positives = 216/370 (58%), Gaps = 60/370 (16%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L +L +NL SN L+G+LP + N+K + LDLS N + G IP + L+ L TL L+ N
Sbjct: 450 LRDLLALNLSSNFLTGNLPPEVGNMKSITTLDLSKNLVSGYIPSKMGKLQSLITLSLSQN 509
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
R QG IP F L SLE LDLS NNLSG IPKSLEAL LK LNVS N+L+GEIP PF
Sbjct: 510 RLQGPIPIEFGDLVSLESLDLSQNNLSGTIPKSLEALIYLKYLNVSLNKLQGEIPNGGPF 569
Query: 121 GNFSSQSFI-SNYALCAHQDS------KRTSYLDILQATDEFNEWHLLGTESLGSVYKWI 173
NF+++SFI N + DS ++ S+ +L AT++F E +L+G S G VYK +
Sbjct: 570 INFTAESFIRDNMEIPTPIDSWLPGTHEKISHQQLLYATNDFGEDNLIGKGSQGMVYKGV 629
Query: 174 FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233
+ VAIKVFNL+ + A RSFDS+CEV + +RHRNL++I+T + L K L M
Sbjct: 630 LSNGLTVAIKVFNLEFQGALRSFDSECEVMQGIRHRNLVRIITCCSNLDFKALVLE--YM 687
Query: 234 PNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV 280
PNG D +RLNIMID+A A EYLHH S+ +VHCDLKP+N LLD+DMV
Sbjct: 688 PNGSLEKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCSSLVVHCDLKPNNVLLDDDMV 747
Query: 281 AHVSDFNISKLL--------------------------------------GVLLPETFTR 302
AHV+DF I+KLL G+LL E F+R
Sbjct: 748 AHVADFGITKLLTKTESMQQTKTLGTIGYMAPAEHGSDGIVSTKSDVYSYGILLMEVFSR 807
Query: 303 KKPTIEMIIG 312
KKP EM G
Sbjct: 808 KKPMDEMFTG 817
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 227/422 (53%), Gaps = 113/422 (26%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L +L +NL SN L+ LP + N+K L+ LDLS N+ G+IP TIS L++L L+L+ N
Sbjct: 703 LRGLLVLNLSSNFLNSQLPLQVGNMKSLVALDLSKNQFSGNIPSTISLLQNLLQLYLSHN 762
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ QG IP +F L SLE LDLS NNLSG IPKSLE L L+ LNVS+N+L+GEIP PF
Sbjct: 763 KLQGHIPPNFGDLVSLESLDLSGNNLSGTIPKSLEHLKYLEYLNVSFNKLQGEIPNGGPF 822
Query: 121 GNFSSQSFISNYALC---------AHQDSKRTS--------------------------- 144
NF+++SFISN ALC +DS++ +
Sbjct: 823 ANFTAESFISNLALCGAPRFQVMACEKDSRKNTKSLLLKCIVPLSVSLSTIILVVLFVQW 882
Query: 145 -------------------------YLDILQATDEFNEWHLLGTESLGSVYKWIFLDETN 179
+ ++L AT+ F E +L+G SLG VYK + D
Sbjct: 883 KRRQTKSETPIQVDLSLPRMHRMIPHQELLYATNYFGEDNLIGKGSLGMVYKGVLSDGLI 942
Query: 180 VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG--- 236
VA+KVFNL+L+ AF+SF+ +CEV +N+RHRNL KI+++ + L K L MPNG
Sbjct: 943 VAVKVFNLELQGAFKSFEVECEVMRNIRHRNLAKIISSCSNLDFKALVLE--YMPNGSLE 1000
Query: 237 ----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
DF +RL IMID+A EYLHH S P+VHCDLKPSN LLD+DMVAH+SDF
Sbjct: 1001 KWLYSHNYYLDFVQRLKIMIDVASGLEYLHHYYSNPVVHCDLKPSNVLLDDDMVAHISDF 1060
Query: 287 NISKLL-------------------------------------GVLLPETFTRKKPTIEM 309
I+KLL G+LL ETF RKKPT EM
Sbjct: 1061 GIAKLLMGSEFMKRTKTLGTVGYMAPEYGSEGIVSTKGDIYSYGILLMETFVRKKPTDEM 1120
Query: 310 II 311
+
Sbjct: 1121 FV 1122
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255578886|ref|XP_002530297.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223530195|gb|EEF32104.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/401 (42%), Positives = 213/401 (53%), Gaps = 112/401 (27%)
Query: 21 NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80
+I NLK + +DLS N+L G IP +I GLK L L LA NR +GSIP+ F SL+ LD
Sbjct: 561 DIGNLKAVTLIDLSGNQLSGHIPSSIGGLKTLLNLSLAVNRLEGSIPQLFGDAISLQLLD 620
Query: 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCA---- 136
LS+NNLSG+IPKSLE L L NVS+N L+GEIP F N S++SF+ N LC
Sbjct: 621 LSNNNLSGEIPKSLEELRYLTYFNVSFNELQGEIPNGRAFINLSAKSFMGNKGLCGAAKL 680
Query: 137 ---------HQDSK---------------------------------------------- 141
HQ SK
Sbjct: 681 QVQPCETSTHQGSKAASKLALRYGLMATGLTILAVAAVAIIFIRSRKRNMRITEGLLPLA 740
Query: 142 ---RTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDS 198
R SY ++ QATD+FNE +LLG S GSVYK F D ++VA+KVFNLQ+E AF+SFD
Sbjct: 741 TLKRISYRELEQATDKFNEMNLLGRGSFGSVYKGTFSDGSSVAVKVFNLQVEGAFKSFDV 800
Query: 199 KCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG-------------DFPERLNIM 245
+CEV + +RHRNL+KI+T+ + + + L MPN + ERLNIM
Sbjct: 801 ECEVLRMIRHRNLVKIITSCSDINIDFKALVLEFMPNYSLEKWLCSPKHFLELLERLNIM 860
Query: 246 IDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------- 292
+D+A A EYLHHG + P+VHCDLKPSN LLDE+MVAHV+DF I+KLL
Sbjct: 861 LDVASAVEYLHHGYAMPIVHCDLKPSNILLDENMVAHVTDFGIAKLLGDEHSFIQTITLA 920
Query: 293 ------------------------GVLLPETFTRKKPTIEM 309
G+LL ETFTRKKPT +M
Sbjct: 921 TVGYMAPEYGSEGVVSTGGDIYSFGILLMETFTRKKPTDDM 961
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485121|ref|XP_003633218.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 224/412 (54%), Gaps = 113/412 (27%)
Query: 12 NSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFE 71
NSLSGSL +N++ LK+L +DL N++ G+IP + G + L +L L+ N G IP+S
Sbjct: 815 NSLSGSLDANMRALKLLETMDLYWNKISGNIPTILGGFQSLRSLNLSRNSFWGPIPESLG 874
Query: 72 SLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131
+ +L+++DLS NNLSG IPKSL ALSNL LN+S+N+L GEIP+ PFGNF++ SF+ N
Sbjct: 875 EMITLDYMDLSHNNLSGLIPKSLVALSNLHYLNLSFNKLSGEIPSEGPFGNFTATSFMEN 934
Query: 132 YAL----------CAHQDSKRT-------------------------------------- 143
AL C D++++
Sbjct: 935 EALCGQKIFQVPPCRSHDTQKSKTMFLLKVILPVIASVSILIALILIVIKYRKRNVTALN 994
Query: 144 -------------SYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE 190
SY ++ +AT++F+E ++LG S GSV+K + D TNVA+KV NLQ+E
Sbjct: 995 SIDVLPSVAHRMISYHELRRATNDFSEANILGVGSFGSVFKGVLFDGTNVAVKVLNLQIE 1054
Query: 191 RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFP----------- 239
AF+SFD++CEV VRHRNL+K++++ + L+ L MPNG
Sbjct: 1055 GAFKSFDAECEVLVRVRHRNLVKVISSCSNPELRALVLQ--YMPNGSLEKWLYSHNYCLN 1112
Query: 240 --ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292
+R++IM+D+ALA EYLHHG+S P+VHCDLKPSN LLD +M+AHV DF I+K+L
Sbjct: 1113 LFQRVSIMVDVALALEYLHHGQSEPVVHCDLKPSNVLLDGEMIAHVGDFGIAKILVENKT 1172
Query: 293 --------------------------------GVLLPETFTRKKPTIEMIIG 312
GV+L E FTRKKPT M +G
Sbjct: 1173 ATQTKTLGTLGYIAPEYGSEGRVSTRGDIYSYGVMLLEMFTRKKPTDVMFVG 1224
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147853795|emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 172/422 (40%), Positives = 224/422 (53%), Gaps = 113/422 (26%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L +L +NL SN L+ LP + N+K L+ LDLS N+ G+IP TIS L++L L+L+ N
Sbjct: 704 LRDLLVLNLSSNFLNCQLPLEVGNMKSLLVLDLSKNQFSGNIPSTISLLQNLLQLYLSHN 763
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ QG +P +F +L SLE+LDLS NN SG IP SLEAL LK LNVS+N+L+GEIP PF
Sbjct: 764 KLQGHMPPNFGALVSLEYLDLSGNNFSGTIPTSLEALKYLKYLNVSFNKLQGEIPNRGPF 823
Query: 121 GNFSSQSFISNYALC---------AHQDSKRT---------------------------- 143
NF+++SFISN ALC +D++R
Sbjct: 824 ANFTAESFISNLALCGAPRFQVMACEKDARRNTKSLLLKCIVPLSVSLSTMILVVLFTLW 883
Query: 144 ------------------------SYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETN 179
S+ ++L AT F E +L+G SLG VYK + D
Sbjct: 884 KRRQTESESPVQVDLLLPRMHRLISHQELLYATSYFGEENLIGKGSLGMVYKGVLSDGLI 943
Query: 180 VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG--- 236
VA+KVFNL+L AF+SF+ +CEV +N+RHRNL KI+++ + L K L MPN
Sbjct: 944 VAVKVFNLELHGAFKSFEVECEVMRNIRHRNLAKIISSCSNLDFKALVLE--YMPNESLE 1001
Query: 237 ----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
DF +RL IMID+A EYLHH S P+VHCDLKPSN LLD+DMVAH+SDF
Sbjct: 1002 KWLYSHNYCLDFIQRLKIMIDVASGLEYLHHDYSNPVVHCDLKPSNVLLDDDMVAHISDF 1061
Query: 287 NISKLL-------------------------------------GVLLPETFTRKKPTIEM 309
I+KLL G++L E F RKKPT EM
Sbjct: 1062 GIAKLLMGSEFMKRTKTLGTIGYMAPEYGSEGIVSTKCDTYSYGIILMEIFVRKKPTDEM 1121
Query: 310 II 311
+
Sbjct: 1122 FV 1123
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449523087|ref|XP_004168556.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 216/415 (52%), Gaps = 119/415 (28%)
Query: 15 SGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLA 74
+GSLP +I N+K+++ LD+S N+L G IP +I L +L L L+ N +GSIP SF +L
Sbjct: 541 TGSLPIDIGNVKLMLDLDVSKNQLSGQIPSSIGDLTNLIGLSLSRNELEGSIPNSFGNLV 600
Query: 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYAL 134
SL LDLS+NNL+G IPKSLE LS L+ NVS+N+L GEIP PF N S+QSF+SN L
Sbjct: 601 SLRVLDLSNNNLTGVIPKSLEKLSLLEHFNVSFNQLVGEIPDGGPFSNLSAQSFMSNPGL 660
Query: 135 CA--------------HQDSKRTS------------------------------------ 144
CA QDSK+ S
Sbjct: 661 CADSSKFQVQPCTRNLSQDSKKKSNKLVIILVPTLLGTFLIVLVLLFLAFRGKRKKEQVL 720
Query: 145 ---------------YLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL 189
Y ++ QAT+ F+E +L+G + GSVYK D T A+KVFNL
Sbjct: 721 KDVPLPHQPTLRRITYQELSQATEGFSEKNLIGQGNFGSVYKATLSDGTIAAVKVFNLLS 780
Query: 190 ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFP---------- 239
E A +SF+ +CE+ NVRHRNL+K++T+ + + K L MP G
Sbjct: 781 ENAHKSFEIECEILCNVRHRNLVKVITSCSNMDFKALVLE--FMPKGSLEIWLNHYEYHC 838
Query: 240 -----ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292
ERLN+MID+ALA EYLH+G P+VHCDLKPSN LLDEDMVA+V+DF ISKLL
Sbjct: 839 NLNTVERLNVMIDVALALEYLHYGFGEPIVHCDLKPSNILLDEDMVAYVTDFGISKLLGG 898
Query: 293 -----------------------------------GVLLPETFTRKKPTIEMIIG 312
GVLL ETFTRKKPT +M G
Sbjct: 899 GDSITQTMTLATVGYMAPELGLDGIVSRRGDIYSYGVLLMETFTRKKPTDQMFCG 953
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116832|ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 218/425 (51%), Gaps = 115/425 (27%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ +LQINL NSL+G+LP I NLKV+ +D S N+L GDIP +I+ L++L L+ N
Sbjct: 554 LKDLLQINLSFNSLTGTLPLEIGNLKVVTVIDFSSNQLSGDIPTSIADLQNLAHFSLSDN 613
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNR-----LEGEIP 115
R QG IP SF L SLEFLDLS N+LSG IPKSLE L +LK NVS+NR L+G
Sbjct: 614 RMQGPIPSSFGDLVSLEFLDLSRNSLSGAIPKSLEKLVHLKTFNVSFNRLQGEILDGGPF 673
Query: 116 TNVPFGNFSSQSFISN---------YALCAHQDSKR------------------------ 142
N F +F + ++ H+ SKR
Sbjct: 674 ANFSFRSFMDNEALCGPIRMQVPPCKSISTHRQSKRPREFVIRYIVPAIAFIILVLALAV 733
Query: 143 -------------------------TSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDE 177
SY ++ +AT+ FNE +LLGT S GSVYK D
Sbjct: 734 IIFRRSHKRKLSTQEDPLPPATWRKISYHELYRATEGFNETNLLGTGSCGSVYKGTLSDG 793
Query: 178 TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG- 236
+A+KVF+LQLE FDS+CEV + +RHRNL+KI+++ L K L +P+G
Sbjct: 794 LCIAVKVFHLQLEGELMRFDSECEVLRMLRHRNLVKIISSCCNLDFKALILE--FIPHGS 851
Query: 237 ------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284
D +RLNIMID+A A EYLHHG + P+VHCDLKPSN L++EDMVAHVS
Sbjct: 852 LEKWLYSHNYYLDILQRLNIMIDVASALEYLHHGCTRPVVHCDLKPSNVLINEDMVAHVS 911
Query: 285 DFNISKLL-------------------------------------GVLLPETFTRKKPTI 307
DF IS+LL G+ L ETFTRKKPT
Sbjct: 912 DFGISRLLGEGDAVTQTLTLATIGYMAPEYGLEGIVSVKGDVYSYGIFLMETFTRKKPTD 971
Query: 308 EMIIG 312
+M G
Sbjct: 972 DMFGG 976
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485080|ref|XP_003633210.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 224/420 (53%), Gaps = 113/420 (26%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
LE + ++L NSL GSL +N++++K+L +DLS NR+ G+IP + + L++L L+GN
Sbjct: 432 LENLWSLDLSFNSLGGSLHANMRSMKMLQTMDLSWNRISGNIPTILGAFESLSSLNLSGN 491
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
GSIP+S L +L+++DLS NNLSG IPK L ALS+L+ LN+S+N+L GEIP + F
Sbjct: 492 LFWGSIPESLGELITLDYMDLSHNNLSGSIPKLLVALSHLRHLNLSFNKLSGEIPRDGCF 551
Query: 121 GNFSSQSFISNYALCAH-------------QDSK-------------------------- 141
NF++ SF+ N ALC Q SK
Sbjct: 552 ENFTAASFLENQALCGQPIFHVPPCQRHITQKSKNKFLFKIFLPCIASVPILVALVLLMI 611
Query: 142 --RTSYLDILQATD--------------------EFNEWHLLGTESLGSVYKWIFLDETN 179
R S ++ L D +F+E ++LG S GSV+K + + T
Sbjct: 612 KYRQSKVETLNTVDVAPAVEHRMISYQELRHATNDFSEANILGVGSFGSVFKGLLSEGTL 671
Query: 180 VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFP 239
VA+KV NLQLE AF+SFD++C+V VRHRNL+K++T+ + L+ L MPNG
Sbjct: 672 VAVKVLNLQLEGAFKSFDAECKVLARVRHRNLVKVITSCSNPELRALVLQ--YMPNGSLE 729
Query: 240 -------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
+R++I++D+ALA EYLHHG+S P+VHCDLKPSN LLD++MVAHV DF
Sbjct: 730 KWLYSFNYSLSLFQRVSILLDVALALEYLHHGQSEPVVHCDLKPSNVLLDDEMVAHVGDF 789
Query: 287 NISKLL-------------------------------------GVLLPETFTRKKPTIEM 309
I+K+L G++L E TRKKP EM
Sbjct: 790 GIAKILAENKTVTQTKTLGTLGYIAPEYGLEGRVSSRGDIYSYGIMLLEMVTRKKPMDEM 849
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147776333|emb|CAN72034.1| hypothetical protein VITISV_000078 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 213/425 (50%), Gaps = 116/425 (27%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L +L +NL SN L+G+LP + N+K + LDLS N + G IP + L+ L TL L+ N
Sbjct: 709 LRDLLVLNLSSNFLTGNLPPEVGNMKSITTLDLSKNLVSGYIPSRMGKLQYLITLSLSQN 768
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
R QG I F L SLE LDLS NNLSG IPKSLEAL LK LNVS+N+L+GEIP PF
Sbjct: 769 RLQGPIXVEFGDLVSLESLDLSHNNLSGTIPKSLEALIYLKYLNVSFNKLQGEIPNGGPF 828
Query: 121 GNFSSQSFISNYALCAH--------------QDSKRTSYL-------------------- 146
F+++SF+ N ALC Q K S++
Sbjct: 829 VKFTAESFMFNEALCGAPHFQVMACDKNNRTQSWKTKSFILKYILLPVGSTVTLVVFIVL 888
Query: 147 -----DILQATDEFNEWHLLGTE------------------------SLGSVYKWIFLDE 177
D ++ + W LLGT S G VYK + +
Sbjct: 889 WIRRRDNMEIPTPIDSW-LLGTHEKISHQQLLYATNDFGEDNLIGKGSQGMVYKGVLSNG 947
Query: 178 TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG- 236
NVAIKVFNL+ + A RSFDS+CEV + +RHRNL++I+T + L K L MPNG
Sbjct: 948 LNVAIKVFNLEFQGALRSFDSECEVMQGIRHRNLVRIITCCSNLDFKALVLE--YMPNGS 1005
Query: 237 ------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284
D +RLNIMID+A A EYLHH S+ +VHCDLKPSN LLD+DMVAHV+
Sbjct: 1006 LEKWLYSHNYFLDLIQRLNIMIDVASALEYLHHDCSSLVVHCDLKPSNVLLDDDMVAHVA 1065
Query: 285 DFNISKLL-------------------------------------GVLLPETFTRKKPTI 307
DF I+KLL G+LL E F RKKP
Sbjct: 1066 DFGIAKLLTETESMQQTKTLGTIGYMAPEHGSAGIVSTKSDVYSYGILLMEVFARKKPMD 1125
Query: 308 EMIIG 312
EM G
Sbjct: 1126 EMFTG 1130
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 312 | ||||||
| TAIR|locus:2149922 | 1031 | EFR "EF-TU receptor" [Arabidop | 0.410 | 0.124 | 0.403 | 1.1e-49 | |
| TAIR|locus:2079142 | 1010 | AT3G47570 [Arabidopsis thalian | 0.429 | 0.132 | 0.385 | 9.1e-47 | |
| TAIR|locus:2075631 | 1009 | AT3G47090 [Arabidopsis thalian | 0.419 | 0.129 | 0.393 | 7.4e-45 | |
| TAIR|locus:2075661 | 1025 | AT3G47110 [Arabidopsis thalian | 0.429 | 0.130 | 0.422 | 1.2e-43 | |
| TAIR|locus:2170483 | 1173 | FLS2 "FLAGELLIN-SENSITIVE 2" [ | 0.496 | 0.132 | 0.379 | 1e-41 | |
| TAIR|locus:2079157 | 1011 | AT3G47580 [Arabidopsis thalian | 0.419 | 0.129 | 0.363 | 7.9e-40 | |
| TAIR|locus:2047525 | 980 | AT2G24130 [Arabidopsis thalian | 0.483 | 0.154 | 0.368 | 1.3e-37 | |
| UNIPROTKB|Q40640 | 1025 | Xa21 "Receptor kinase-like pro | 0.419 | 0.127 | 0.442 | 6.7e-34 | |
| TAIR|locus:2206179 | 592 | FEI1 "FEI 1" [Arabidopsis thal | 0.435 | 0.229 | 0.408 | 1.8e-33 | |
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.423 | 0.126 | 0.414 | 3e-33 |
| TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 52/129 (40%), Positives = 78/129 (60%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I+L +N L+G P + L++L+GL S N+L G +P I G + LF+ GN G+I
Sbjct: 494 IDLSNNFLTGHFPEEVGKLELLVGLGASYNKLSGKMPQAIGGCLSMEFLFMQGNSFDGAI 553
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P L SL+ +D S+NNLSG+IP+ L +L +L+ LN+S N+ EG +PT F N ++
Sbjct: 554 P-DISRLVSLKNVDFSNNNLSGRIPRYLASLPSLRNLNLSMNKFEGRVPTTGVFRNATAV 612
Query: 127 SFISNYALC 135
S N +C
Sbjct: 613 SVFGNTNIC 621
|
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| TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 238 (88.8 bits), Expect = 9.1e-47, Sum P(3) = 9.1e-47
Identities = 52/135 (38%), Positives = 82/135 (60%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
++ +L++++ NSL GSLP +I L+ L L L N+L G +P T+ + +LFL GN
Sbjct: 480 IQQLLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGN 539
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
G IP + L ++ +DLS+N+LSG IP+ + S L+ LN+S+N LEG++P F
Sbjct: 540 LFYGDIP-DLKGLVGVKEVDLSNNDLSGSIPEYFASFSKLEYLNLSFNNLEGKVPVKGIF 598
Query: 121 GNFSSQSFISNYALC 135
N ++ S + N LC
Sbjct: 599 ENATTVSIVGNNDLC 613
|
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| TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 224 (83.9 bits), Expect = 7.4e-45, Sum P(3) = 7.4e-45
Identities = 52/132 (39%), Positives = 76/132 (57%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++ +N+ SNSLSGSLP++I L+ L+ L L N L G +P T+ + ++L N
Sbjct: 484 LVHLNMESNSLSGSLPNDIGRLQNLVELLLGNNNLSGHLPQTLGKCLSMEVIYLQENHFD 543
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
G+IP + L ++ +DLS+NNLSG I + E S L+ LN+S N EG +PT F N
Sbjct: 544 GTIP-DIKGLMGVKNVDLSNNNLSGSISEYFENFSKLEYLNLSDNNFEGRVPTEGIFQNA 602
Query: 124 SSQSFISNYALC 135
+ S N LC
Sbjct: 603 TLVSVFGNKNLC 614
|
|
| TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 246 (91.7 bits), Expect = 1.2e-43, Sum P(3) = 1.2e-43
Identities = 57/135 (42%), Positives = 74/135 (54%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ +N+ N L G L +I LK L+ LD+S N+L G IP T++ L L L GN
Sbjct: 496 LPSLVVLNVSFNLLVGPLRQDIGKLKFLLALDVSYNKLSGQIPQTLANCLSLEFLLLQGN 555
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
G IP L L FLDLS NNLSG IP+ + S L+ LN+S N +G +PT F
Sbjct: 556 SFVGPIP-DIRGLTGLRFLDLSKNNLSGTIPEYMANFSKLQNLNLSLNNFDGAVPTEGVF 614
Query: 121 GNFSSQSFISNYALC 135
N S+ S N LC
Sbjct: 615 RNTSAMSVFGNINLC 629
|
|
| TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 252 (93.8 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 60/158 (37%), Positives = 91/158 (57%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAG 59
LE + +I+L +N SGS+P ++Q K + LD S N L G IP + G+ + +L L+
Sbjct: 648 LEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQNNLSGHIPDEVFQGMDMIISLNLSR 707
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
N G IP+SF ++ L LDLSSNNL+G+IP+SL LS LK L ++ N L+G +P +
Sbjct: 708 NSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTLKHLKLASNNLKGHVPESGV 767
Query: 120 FGNFSSQSFISNYALCAHQDSKRTSYLDILQATDEFNE 157
F N ++ + N LC + K I Q + F++
Sbjct: 768 FKNINASDLMGNTDLCGSK--KPLKPCTIKQKSSHFSK 803
|
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| TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 213 (80.0 bits), Expect = 7.9e-40, Sum P(3) = 7.9e-40
Identities = 48/132 (36%), Positives = 75/132 (56%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++ +++ NSLSGSLP++I +L+ L+ L L N+ G +P T+ + LFL GN
Sbjct: 484 LVNLSMEGNSLSGSLPNDIGSLQNLVKLSLENNKFSGHLPQTLGNCLAMEQLFLQGNSFD 543
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
G+IP + L + +DLS+N+LSG IP+ S L+ LN+S N G++P+ F N
Sbjct: 544 GAIP-NIRGLMGVRRVDLSNNDLSGSIPEYFANFSKLEYLNLSINNFTGKVPSKGNFQNS 602
Query: 124 SSQSFISNYALC 135
+ N LC
Sbjct: 603 TIVFVFGNKNLC 614
|
|
| TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 1.3e-37, Sum P(2) = 1.3e-37
Identities = 63/171 (36%), Positives = 86/171 (50%)
Query: 142 RTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR-SFDSKC 200
R SY ++ AT FN L+G+ G VYK + + T VA+KV + + F SF +C
Sbjct: 648 RISYQQLIAATGGFNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKREC 707
Query: 201 EVHKNVRHRNXXXXXXXXXXXXXXPWYLSSCVMPNGD-----FP-----------ERLNI 244
++ K RHRN L +MPNG +P + +NI
Sbjct: 708 QILKRTRHRNLIRIITTCSKPGFNALVLP--LMPNGSLERHLYPGEYSSKNLDLIQLVNI 765
Query: 245 MIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-GV 294
D+A YLHH +VHCDLKPSN LLD++M A V+DF IS+L+ GV
Sbjct: 766 CSDVAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGV 816
|
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| UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)] | Back alignment and assigned GO terms |
|---|
Score = 250 (93.1 bits), Expect = 6.7e-34, Sum P(2) = 6.7e-34
Identities = 58/131 (44%), Positives = 74/131 (56%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+ IN+ N+L GS+P I +LK L+ NRL G IP T+ + L L+L N G
Sbjct: 500 IMINVSKNNLEGSIPQEIGHLKNLVEFHAESNRLSGKIPNTLGDCQLLRYLYLQNNLLSG 559
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
SIP + L LE LDLSSNNLSG+IP SL ++ L LN+S+N GE+PT F S
Sbjct: 560 SIPSALGQLKGLETLDLSSNNLSGQIPTSLADITMLHSLNLSFNSFVGEVPTIGAFAAAS 619
Query: 125 SQSFISNYALC 135
S N LC
Sbjct: 620 GISIQGNAKLC 630
|
|
| TAIR|locus:2206179 FEI1 "FEI 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 222 (83.2 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 56/137 (40%), Positives = 69/137 (50%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++ +NL + + G LP +I L L L L N LYG IP + L + L N
Sbjct: 76 VITLNLTYHKIMGPLPPDIGKLDHLRLLMLHNNALYGAIPTALGNCTALEEIHLQSNYFT 135
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
G IP L L+ LD+SSN LSG IP SL L L NVS N L G+IP++ F
Sbjct: 136 GPIPAEMGDLPGLQKLDMSSNTLSGPIPASLGQLKKLSNFNVSNNFLVGQIPSDGVLSGF 195
Query: 124 SSQSFISNYALCA-HQD 139
S SFI N LC H D
Sbjct: 196 SKNSFIGNLNLCGKHVD 212
|
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| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 224 (83.9 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 56/135 (41%), Positives = 75/135 (55%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
LEY+ +L SN S +P + NL L ++LS N L IP ++ L L L L+ N
Sbjct: 552 LEYL---DLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSYN 608
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ G I F SL +LE LDLS NNLSG+IP S + + L ++VS+N L+G IP N F
Sbjct: 609 QLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAAF 668
Query: 121 GNFSSQSFISNYALC 135
N +F N LC
Sbjct: 669 RNAPPDAFEGNKDLC 683
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00014285001 | SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (1016 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 312 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-20 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 6e-20 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 7e-18 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-17 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-17 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-17 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-16 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-15 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-14 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-13 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 4e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-12 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 5e-12 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-11 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-10 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 6e-09 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-08 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 4e-08 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 5e-08 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 9e-08 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-07 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 2e-07 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-07 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-07 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 8e-07 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-06 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 4e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-05 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-05 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 1e-05 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-05 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 2e-05 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 2e-05 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 2e-05 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 3e-05 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 6e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 7e-05 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 7e-05 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 2e-04 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 2e-04 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 2e-04 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-04 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-04 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-04 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 3e-04 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 5e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 5e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 5e-04 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 5e-04 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-04 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 7e-04 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 7e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 8e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 8e-04 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 0.001 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 0.001 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 0.002 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 0.002 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.002 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 0.003 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 0.003 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 0.003 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 0.003 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.004 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 3e-20
Identities = 52/115 (45%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+Y+ L+ N LSG +P +I +L+ LI LDLS N L G+IP + L++L L L N
Sbjct: 262 LQYLF---LYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSN 318
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
G IP + SL L+ L L SN SG+IPK+L +NL L++S N L GEIP
Sbjct: 319 NFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIP 373
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 89.9 bits (223), Expect = 6e-20
Identities = 50/131 (38%), Positives = 77/131 (58%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L N SG++P + +L L+ L LS N+L G+IP +S K L +L L+ N+ G
Sbjct: 479 NLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQ 538
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
IP SF + L LDLS N LSG+IPK+L + +L ++N+S+N L G +P+ F ++
Sbjct: 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINA 598
Query: 126 QSFISNYALCA 136
+ N LC
Sbjct: 599 SAVAGNIDLCG 609
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 7e-18
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
+ +NL +N+ +GS+P ++ L LDLS N L G+IP I L L L GN
Sbjct: 120 LRYLNLSNNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLV 177
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
G IP S +L SLEFL L+SN L G+IP+ L + +LK + + YN L GEIP +
Sbjct: 178 GKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEI 232
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 83.4 bits (206), Expect = 1e-17
Identities = 48/112 (42%), Positives = 69/112 (61%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N+L+G +PS++ NLK L L L N+L G IP +I L+ L +L L+ N G I
Sbjct: 241 LDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI 300
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
P+ L +LE L L SNN +GKIP +L +L L+ L + N+ GEIP N+
Sbjct: 301 PELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNL 352
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 83.4 bits (206), Expect = 1e-17
Identities = 50/112 (44%), Positives = 65/112 (58%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I L N+LSG +P I L L LDL N L G IP ++ LK+L LFL N+ G I
Sbjct: 217 IYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI 276
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
P S SL L LDLS N+LSG+IP+ + L NL+ L++ N G+IP +
Sbjct: 277 PPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVAL 328
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 2e-17
Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 27 VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNL 86
+ GL L L G IP IS L+ L ++ L+GN +G+IP S S+ SLE LDLS N+
Sbjct: 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSF 478
Query: 87 SGKIPKSLEALSNLKELNVSYNRLEGEIPTNV---PFGNFSSQSFISNYALC 135
+G IP+SL L++L+ LN++ N L G +P + +S +F N LC
Sbjct: 479 NGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHR-ASFNFTDNAGLC 529
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 2e-16
Identities = 46/109 (42%), Positives = 60/109 (55%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L SN L G +P + +K L + L N L G+IP I GL L L L N G I
Sbjct: 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPI 252
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
P S +L +L++L L N LSG IP S+ +L L L++S N L GEIP
Sbjct: 253 PSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP 301
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 2e-16
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 2/126 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L +N LSG +P++I + L LDL N L G IP +++ L L L LA N+ G I
Sbjct: 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQI 204
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P+ + SL+++ L NNLSG+IP + L++L L++ YN L G IP++ GN +
Sbjct: 205 PRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSS--LGNLKNL 262
Query: 127 SFISNY 132
++ Y
Sbjct: 263 QYLFLY 268
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 3e-16
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N L G +P+++ NL L L L+ N+L G IP + +K L ++L N G I
Sbjct: 169 LDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEI 228
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P L SL LDL NNL+G IP SL L NL+ L + N+L G IP ++ FS Q
Sbjct: 229 PYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSI----FSLQ 284
Query: 127 SFIS 130
IS
Sbjct: 285 KLIS 288
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 1e-15
Identities = 48/110 (43%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ L NS SG LPS L ++ LD+S N L G I + L L LA N+ G
Sbjct: 408 RVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGG 467
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+P SF S LE LDLS N SG +P+ L +LS L +L +S N+L GEIP
Sbjct: 468 LPDSFGS-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP 516
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (186), Expect = 4e-15
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L Y L I+ +N+L G + S ++ L L L+ N+ +G +P G K L L L+ N
Sbjct: 429 LVYFLDIS--NNNLQGRINSRKWDMPSLQMLSLARNKFFGGLP-DSFGSKRLENLDLSRN 485
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+ G++P+ SL+ L L LS N LSG+IP L + L L++S+N+L G+IP
Sbjct: 486 QFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIP 540
|
Length = 968 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 33/91 (36%), Positives = 54/91 (59%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L + L G +P++I L+ L ++LS N + G+IP ++ + L L L+ N GSI
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEAL 97
P+S L SL L+L+ N+LSG++P +L
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
Length = 623 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 1e-13
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 5 LQI-NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
LQ+ L+SN SG +P N+ L LDLS N L G+IP + +L L L N +
Sbjct: 334 LQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLE 393
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
G IPKS + SL + L N+ SG++P L + L++S N L+G I +
Sbjct: 394 GEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINS 446
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 1e-13
Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 17/147 (11%)
Query: 161 LGTESLGSVYK-WIFLDETNVAIKVFNLQLERAFRSFDSK-CEVHKNVRHRNLIKIL--- 215
LG G+VY VAIK+ + + + E+ K + H N++K+
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60
Query: 216 -TTIAILILKPWY----LSSCVMPNG---DFPERLNIMIDMALAFEYLHHGRSTPMVHCD 267
+ ++ + L + N E L I++ + EYLH S ++H D
Sbjct: 61 EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRD 117
Query: 268 LKPSNNLLDED-MVAHVSDFNISKLLG 293
LKP N LLD D ++DF +SKLL
Sbjct: 118 LKPENILLDSDNGKVKLADFGLSKLLT 144
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 4e-13
Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++LFSN+ +G +P + +L L L L N+ G+IP + +LT L L+ N G I
Sbjct: 313 LHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEI 372
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP---TNVPFGNF 123
P+ S +L L L SN+L G+IPKSL A +L+ + + N GE+P T +P F
Sbjct: 373 PEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYF 432
Query: 124 SSQSFISNYALCAHQDSKR 142
ISN L +S++
Sbjct: 433 LD---ISNNNLQGRINSRK 448
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 68.0 bits (166), Expect = 1e-12
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGL-KDLTTLFLAGNRS 62
++ I+L ++SG + S I L + ++LS N+L G IP I L L L+ N
Sbjct: 71 VVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNF 130
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
GSIP+ + +LE LDLS+N LSG+IP + + S+LK L++ N L G+IP ++ N
Sbjct: 131 TGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL--TN 186
Query: 123 FSSQSFIS 130
+S F++
Sbjct: 187 LTSLEFLT 194
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 5e-12
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 24/149 (16%)
Query: 161 LGTESLGSVYK--WIFLDETNVAIKVFNLQLER--AFRSFDSKCEVHKNVRHRNLIKIL- 215
LG+ S G+VYK VA+K+ + E+ ++ + + + + H N+++++
Sbjct: 7 LGSGSFGTVYKAKHK-GTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65
Query: 216 -----TTIAILI-------LKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPM 263
+ +++ L + + E I + + EYLH S +
Sbjct: 66 AFEDKDHLYLVMEYCEGGDLFDYLSRGGPL---SEDEAKKIALQILRGLEYLH---SNGI 119
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DLKP N LLDE+ V ++DF ++K L
Sbjct: 120 IHRDLKPENILLDENGVVKIADFGLAKKL 148
|
Length = 260 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 1e-11
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 23/150 (15%)
Query: 160 LLGTESLGSVYK--WIFLDETNVAIKVFNLQLERAFR-SFDSKCEVHKNVRHRNLIKILT 216
LG S G VY + VAIKV + + R + ++ K ++H N++++
Sbjct: 6 KLGEGSFGKVYLARDKKTGKL-VAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYD 64
Query: 217 TIA-----ILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLH-HGRSTPM 263
L+++ Y L + G E + + A EYLH G +
Sbjct: 65 VFEDEDKLYLVME--YCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG----I 118
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
VH DLKP N LLDED ++DF +++ L
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLARQLD 148
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 3e-10
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 24 NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKS-FESLASLEFLDLS 82
N ++ +DLS + G I I L + T+ L+ N+ G IP F + +SL +L+LS
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLS 126
Query: 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFI 129
+NN +G IP+ ++ NL+ L++S N L GEIP ++ G+FSS +
Sbjct: 127 NNNFTGSIPRG--SIPNLETLDLSNNMLSGEIPNDI--GSFSSLKVL 169
|
Length = 968 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 55.2 bits (134), Expect = 6e-09
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 30/148 (20%)
Query: 167 GSVYK--WIFLDE---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
G VYK E T VA+K E F + + K + H N++++L
Sbjct: 13 GEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLG--VC 70
Query: 221 LILKPWYLSSCV---MPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMV 264
+P Y+ V MP GD + L + + +A EYL S V
Sbjct: 71 TQGEPLYI---VTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE---SKNFV 124
Query: 265 HCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H DL N L+ E++V +SDF +S+ +
Sbjct: 125 HRDLAARNCLVTENLVVKISDFGLSRDI 152
|
Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 53.7 bits (130), Expect = 2e-08
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 22/152 (14%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFNLQ--LERAFRSFDSKCEVHKNVRHRNLIKI 214
LLG S GSVY +T +A+K L E + + + + +++H N+++
Sbjct: 6 ELLGRGSFGSVYL-ALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRY 64
Query: 215 L------TTIAILILKPWY----LSSCVMPNGDFPERL--NIMIDMALAFEYLH-HGRST 261
+ I + LSS + G PE + + YLH +G
Sbjct: 65 YGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG--- 121
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+VH D+K +N L+D D V ++DF +K LG
Sbjct: 122 -IVHRDIKGANILVDSDGVVKLADFGCAKRLG 152
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 4e-08
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIK 213
EF LG+ G V++ ++ + VAIK+ + F + + K +RH++LI
Sbjct: 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLIS 66
Query: 214 ILTTIAILILKPWYLSSCVMPNGDF------PE----RLNIMIDMAL----AFEYLHHGR 259
+ + + +P Y+ + +M G PE + +IDMA YL
Sbjct: 67 LFAVCS--VGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S +H DL N L+ ED+V V+DF +++L+
Sbjct: 125 S---IHRDLAARNILVGEDLVCKVADFGLARLI 154
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 5e-08
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219
+G G V + + VA+K A ++F ++ V +RH NL+++L +
Sbjct: 13 TIGKGEFGDVMLGDYRGQK-VAVKCLKDDSTAA-QAFLAEASVMTTLRHPNLVQLLGVV- 69
Query: 220 ILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHGRSTPMVH 265
L P Y+ + M G ++L +D+ EYL VH
Sbjct: 70 -LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVH 125
Query: 266 CDLKPSNNLLDEDMVAHVSDFNISK 290
DL N L+ ED+VA VSDF ++K
Sbjct: 126 RDLAARNVLVSEDLVAKVSDFGLAK 150
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 9e-08
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 238 FPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
FPE L+ + + LA +YLH + ++H D+KP N L + + + DF ISK+L
Sbjct: 100 FPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVL 153
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 32/156 (20%)
Query: 161 LGTESLGSVYK--WIFLDETN---VAIKVFNL-QLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG + G VYK VA+K E+ F + + + + H N++K+
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKL 66
Query: 215 LTTIAILILKPWYLSSCV----MPNGDF-------------PERLNIMIDMALAFEYLHH 257
+ + + + M GD + L+ + +A EYL
Sbjct: 67 ---LGVCTEEE---PLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLE- 119
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
S +H DL N L+ E++V +SDF +S+ L
Sbjct: 120 --SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 153
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 2e-07
Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 25/152 (16%)
Query: 161 LGTESLGSVYK--WIFLD---ETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG + G VYK E VA+K E+ F + + + + H N++K+
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKL 66
Query: 215 LTTIAILILKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRS 260
L +P + MP GD + L+ + +A EYL S
Sbjct: 67 LG--VCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---S 121
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E++V +SDF +S+ L
Sbjct: 122 KNFIHRDLAARNCLVGENLVVKISDFGLSRDL 153
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 244 IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----------- 292
+ ++ LA EYLH S ++H D+KP N LLDE H++DFNI+ +
Sbjct: 105 WICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSG 161
Query: 293 --GVLLPETFTRKK 304
G + PE R+
Sbjct: 162 TPGYMAPEVLCRQG 175
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 3e-07
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR-SFDSKCEVHKNVRHRNLIKILTTI 218
LLG + G V+K D+T VA+K L + + F S+ + K H N++K++
Sbjct: 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC 61
Query: 219 AILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVH 265
+P Y+ ++P GDF + + +D A YL S +H
Sbjct: 62 T--QRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYL---ESKNCIH 116
Query: 266 CDLKPSNNLLDEDMVAHVSDFNISK 290
DL N L+ E+ V +SDF +S+
Sbjct: 117 RDLAARNCLVGENNVLKISDFGMSR 141
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 8e-07
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
+G G+V + + + VA+K N++ + ++F + V + H+NL+++L +
Sbjct: 14 IGEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLL---GV 67
Query: 221 LILKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHC 266
++ Y+ +M G+ + L +D+A EYL S +VH
Sbjct: 68 ILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHR 124
Query: 267 DLKPSNNLLDEDMVAHVSDFNISK 290
DL N L+ ED VA VSDF +++
Sbjct: 125 DLAARNILVSEDGVAKVSDFGLAR 148
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 1e-06
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 52 LTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
L +L L+ NR +F+ L +L+ LDLS NNL+ P++ L +L+ L++S N L
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-06
Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 37/155 (23%)
Query: 167 GSVYKWIFLD----ETNVAIKVFNLQLERAFRS-FDSKCEVHKNVRHRNLIKILTTIAIL 221
G VYK T VA+K R F + V K + H N++++L
Sbjct: 9 GEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLG--VCT 66
Query: 222 ILKPWYLSSCV---MPNGD---------------------FPERLNIMIDMALAFEYLHH 257
+P YL V M GD + L+ I +A EYL
Sbjct: 67 EEEPLYL---VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA- 122
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S VH DL N L+ ED+V +SDF +S+ +
Sbjct: 123 --SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 5e-06
Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 33/167 (19%)
Query: 161 LGTESLGSVYK-WIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219
+G G VYK VAIKV L+ + ++ ++ K +H N++K +
Sbjct: 8 IGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY- 66
Query: 220 ILILKPW----YLS---------SCVMPNGDFPERL--NIMIDMALAFEYLH-HGRSTPM 263
+ + W + S S E + ++ EYLH +G +
Sbjct: 67 LKKDELWIVMEFCSGGSLKDLLKSTNQT---LTESQIAYVCKELLKGLEYLHSNG----I 119
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPTIEMI 310
+H D+K +N LL D + DF +S + K M+
Sbjct: 120 IHRDIKAANILLTSDGEVKLIDFGLSA--------QLSDTKARNTMV 158
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-05
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 44 ITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALS-NLKE 102
IT + + ++ L+G G I + L ++ ++LS+N LSG IP + S +L+
Sbjct: 63 ITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRY 122
Query: 103 LNVSYNRLEGEIP 115
LN+S N G IP
Sbjct: 123 LNLSNNNFTGSIP 135
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 1e-05
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR 61
+ ++ ++L N LSG +P++ + VL LDLS N+L G+IP + ++ L + ++ N
Sbjct: 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582
Query: 62 SQGSIPKSFESLA 74
GS+P + LA
Sbjct: 583 LHGSLPSTGAFLA 595
|
Length = 968 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFR-SFDSKCEVHKNVRHRNLIKILTTI 218
+G + G VYK + T VA+K L + F + E+ K H N++K+ I
Sbjct: 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKL---I 58
Query: 219 AILILK-PWYLSSCVMPNGDF-------PERLNIM------IDMALAFEYLHHGRSTPMV 264
+ + K P Y+ ++P G RL + +D A EYL S +
Sbjct: 59 GVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCI 115
Query: 265 HCDLKPSNNLLDEDMVAHVSDFNISK 290
H DL N L+ E+ V +SDF +S+
Sbjct: 116 HRDLAARNCLVGENNVLKISDFGMSR 141
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-05
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 247 DMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
++ LA EYLH G +++ DLKP N LLD D ++DF ++K
Sbjct: 101 EIVLALEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAK 141
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 22/150 (14%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRS-FDSKCEVHKNVRHRNLIKIL 215
+LG S G VYK T A+K ++ + FR + + ++ ++K
Sbjct: 7 KVLGQGSSGVVYKVRH-KPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCY 65
Query: 216 T------TIAILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRSTP 262
I+I +L+ Y L+ + G PE + I + +YLH R
Sbjct: 66 GAFYKEGEISI-VLE--YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH-- 120
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H D+KPSN L++ ++DF ISK+L
Sbjct: 121 IIHRDIKPSNLLINSKGEVKIADFGISKVL 150
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 2e-05
Identities = 26/56 (46%), Positives = 30/56 (53%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNL 86
LDLS NRL GL +L L L+GN P++F L SL LDLS NNL
Sbjct: 5 LDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 2e-05
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
LG G V+ + T VAIK + +F + +V K +RH L+++ A+
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLY---AV 69
Query: 221 LILKPWYLSSCVMPNGDFPE----------RLNIMIDMALAFEY-LHHGRSTPMVHCDLK 269
+ +P Y+ + M G + RL ++DMA + + VH DL+
Sbjct: 70 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 129
Query: 270 PSNNLLDEDMVAHVSDFNISKLL 292
+N L+ E++V V+DF +++L+
Sbjct: 130 AANILVGENLVCKVADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-05
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 37/162 (22%)
Query: 160 LLGTESLGSVYK---------WIFLDETNVAIKVFNLQLERAFRSFDSKCE--------V 202
LG+ + G VYK + L E NV N + R D +
Sbjct: 7 HLGSGAFGCVYKVRKKNNGQNLLALKEINVH----NPAFGKDKRERDKSIGDIVSEVTII 62
Query: 203 HKNVRHRNLIKILTTIA----ILILKPW--------YLSSCVMPNGDFPE-RL-NIMIDM 248
+ +RH N+++ T + I+ + +S F E R+ NI + M
Sbjct: 63 KEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQM 122
Query: 249 ALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
LA YLH + +VH DL P+N +L ED ++DF ++K
Sbjct: 123 VLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAK 162
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 44/146 (30%), Positives = 73/146 (50%), Gaps = 22/146 (15%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFNLQ--LERAFRSFDSKCEVHKNVRHRNLIKIL 215
L+G + G VYK + L ET VAIK +L+ E A +S + ++ KN++H N++K +
Sbjct: 7 LIGRGAFGVVYKGLNL-ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65
Query: 216 TTIAI-----LILKPWY-----LSSCVMPNGDFPERLNI--MIDMALAFEYLHHGRSTPM 263
+I +IL+ Y L + G FPE L + + YLH +
Sbjct: 66 GSIETSDSLYIILE--YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH---EQGV 120
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNIS 289
+H D+K +N L +D V ++DF ++
Sbjct: 121 IHRDIKAANILTTKDGVVKLADFGVA 146
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 3e-05
Identities = 41/153 (26%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 159 HLLGTESLGSVYK--WIFLDETNVAIKVF---NLQLERAFRSFDSKCEVHKNVRHRNLIK 213
H LG G VY+ W T VA+K +++E F + V K ++H NL++
Sbjct: 12 HKLGGGQYGEVYEGVWKKYSLT-VAVKTLKEDTMEVE----EFLKEAAVMKEIKHPNLVQ 66
Query: 214 ILTTIAILILKPWYLSSCVMPNGDFPERLN----------IMIDMAL----AFEYLHHGR 259
+L P+Y+ + M G+ + L +++ MA A EYL
Sbjct: 67 LLGVCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 121
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E+ + V+DF +S+L+
Sbjct: 122 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 154
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 6e-05
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 45/166 (27%)
Query: 160 LLGTESLGSVYK-WIFLDET---NVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIK 213
+LG GSV + + D+ VA+K L + F S+ K+ H N++K
Sbjct: 6 ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMK 65
Query: 214 ILTTIAI-----------LILKPWYLSSCVMPNGDF------------PERLNI------ 244
++ + +++ P+ M +GD PE+L +
Sbjct: 66 LIG-VCFEASSLQKIPKPMVILPF------MKHGDLHSFLLYSRLGGLPEKLPLQTLLKF 118
Query: 245 MIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
M+D+AL EYL + +H DL N +L EDM V+DF +SK
Sbjct: 119 MVDIALGMEYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 238 FPER--LNIMIDMALAFEYLHHGR--STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
E I+ + LA H+ ++H DLKP+N LD + + DF ++K+LG
Sbjct: 102 IEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILG 161
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 7e-05
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 22/128 (17%)
Query: 178 TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI-----AILILKPWYLSSCV 232
VA+K ++ + ++F ++ V +RH NL+++L I + I+ + +
Sbjct: 30 NKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 87
Query: 233 MP----------NGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAH 282
+ GD L +D+ A EYL + VH DL N L+ ED VA
Sbjct: 88 VDYLRSRGRSVLGGD--CLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNVAK 142
Query: 283 VSDFNISK 290
VSDF ++K
Sbjct: 143 VSDFGLTK 150
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 161 LGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVH--KNVRHRNLIKILTT 217
+G + VY I L VAIK +L+ + K EV H N++K T+
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRK-EVQAMSQCNHPNVVKYYTS 67
Query: 218 IAI-----LILKPWYLS--SCV------MPNGDFPERL--NIMIDMALAFEYLH-HGRST 261
+ L++ YLS S + P G E + ++ ++ EYLH +G+
Sbjct: 68 FVVGDELWLVMP--YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ-- 123
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H D+K N LL ED ++DF +S L
Sbjct: 124 --IHRDIKAGNILLGEDGSVKIADFGVSASL 152
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 32/142 (22%)
Query: 176 DETNVAIKVF-NLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234
D+ VA+K A + F+ + E+ N +H N++K P + M
Sbjct: 34 DKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYG--VCTEGDPPIMVFEYME 91
Query: 235 NGDFPERL--------------------------NIMIDMALAFEYLHHGRSTPMVHCDL 268
+GD + L I + +A YL S VH DL
Sbjct: 92 HGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRDL 148
Query: 269 KPSNNLLDEDMVAHVSDFNISK 290
N L+ D+V + DF +S+
Sbjct: 149 ATRNCLVGYDLVVKIGDFGMSR 170
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVF---NLQLERAFRSFDSKCEVHKNVRHRNLIKILTT 217
LG G V+ + T VA+K + E +F + ++ K +RH L+++
Sbjct: 14 LGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPE----AFLQEAQIMKKLRHDKLVQLYAV 69
Query: 218 IAILILKPWYLSSCVMPNG---DF---PE----RLNIMIDMAL----AFEYLHHGRSTPM 263
+ +P Y+ + M G DF E RL ++DMA YL
Sbjct: 70 CSEE--EPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---Y 124
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E++V ++DF +++L+
Sbjct: 125 IHRDLAARNILVGENLVCKIADFGLARLI 153
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 2e-04
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 176 DETNVAIKVFNL-QLERAFR-SFDSKCEVHKNVRHRNLIK----ILTTIAILILKPWYLS 229
D+ V IK + Q+ + R + ++C+V K + H N+I+ L A++I+ +
Sbjct: 24 DQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG 83
Query: 230 SCVMP------NGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMV 280
+ N E L+ + + LA LHH + ++H DLK N LLD+ MV
Sbjct: 84 GTLAEYIQKRCNSLLDEDTILHFFVQILLA---LHHVHTKLILHRDLKTQNILLDKHKMV 140
Query: 281 AHVSDFNISKLLG 293
+ DF ISK+L
Sbjct: 141 VKIGDFGISKILS 153
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 160 LLGTESLGSVYKWIFLDE-TNVAIKVFNL-----QLERAFRSFDSKCEVHKNVRHRNLIK 213
LLG+ S GSVY+ + LD+ A+K +L + A + + + + ++H N+++
Sbjct: 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ 66
Query: 214 ILTT--------IAILILKPWYLSSCVMPNGDFPERLNIMI--DMALAFEYLHHGRSTPM 263
L T I + ++ L+ + G FPE + + + L EYLH R+T
Sbjct: 67 YLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLH-DRNT-- 123
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISK 290
VH D+K +N L+D + V ++DF ++K
Sbjct: 124 VHRDIKGANILVDTNGVVKLADFGMAK 150
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 3e-04
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 40/160 (25%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
LG S GSVYK L D A+K +L S+ E V N I+IL ++
Sbjct: 7 KLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-------SQKEREDAV---NEIRILASV 56
Query: 219 ---AILILKPWYLSSC----VM---PNGD--------------FPERL--NIMIDMALAF 252
I+ K +L VM P GD PE+ I I +
Sbjct: 57 NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGL 116
Query: 253 EYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ LH ++H DLK +N LL + + + D ISK+L
Sbjct: 117 QALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVL 153
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 3e-04
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 242 LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
+ MID+A EYL S +H DL N +L+E+M V+DF +SK
Sbjct: 116 VRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSK 161
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 5e-04
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
++ LAFEYLH S +++ DLKP N LLD V+DF +K
Sbjct: 126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166
|
Length = 329 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 5e-04
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 25/153 (16%)
Query: 161 LGTESLGSVYK--WIFLDETN---VAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKI 214
LG+ + G+VYK WI E VAIKV + A + + V +V H +++++
Sbjct: 15 LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74
Query: 215 LTTIAILILKPWYLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRST 261
L I + L + +MP G + LN + +A YL R
Sbjct: 75 L---GICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR-- 129
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGV 294
+VH DL N L+ ++DF ++KLL V
Sbjct: 130 -LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 5e-04
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLDETN-----VAIKVFNLQL-ERAFRSFDSK 199
L IL+ T E +LG+ + G+VYK I++ E VAIK+ N +A F +
Sbjct: 1 LRILKET-ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 59
Query: 200 CEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPER-------------LNIMI 246
+ ++ H +L+++L + + L + +MP+G + LN +
Sbjct: 60 ALIMASMDHPHLVRLL---GVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCV 116
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+A YL R +VH DL N L+ ++DF +++LL
Sbjct: 117 QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 40.9 bits (94), Expect = 5e-04
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 25/152 (16%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLER---AFRSFDSKCEVHKNVRHRNLIKILT 216
LG S G VY D VA+KV +LE F + ++ ++ H I L
Sbjct: 7 KLGEGSFGEVYL--ARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64
Query: 217 TIAILILKPWYLSSCVMPNGDF---------------PERLNIMIDMALAFEYLHHGRST 261
YL + G E L I+ + A EYLH S
Sbjct: 65 DF-FQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SK 120
Query: 262 PMVHCDLKPSNNLLDED-MVAHVSDFNISKLL 292
++H D+KP N LLD D V + DF ++KLL
Sbjct: 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAKLL 152
|
Length = 384 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
LG G V+ + T VAIK Q + +F ++ + K ++H L+++ A+
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKSLK-QGSMSPEAFLAEANLMKQLQHPRLVRLY---AV 69
Query: 221 LILKPWYLSSCVMPNG---DF---PE----RLNIMIDMALAF-EYLHHGRSTPMVHCDLK 269
+ +P Y+ + M NG DF PE +N +IDMA E + +H DL+
Sbjct: 70 VTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129
Query: 270 PSNNLLDEDMVAHVSDFNISKLL 292
+N L+ E + ++DF +++L+
Sbjct: 130 AANILVSETLCCKIADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 7e-04
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 177 ETNVAIKVFNLQLE------RAFRSFD-SKCEVHKNV--------RHRNLIKILTTIAIL 221
E NVAIK + + RA+R KC HKN+ ++L + ++
Sbjct: 49 ERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108
Query: 222 ILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281
L L + D ++ M ++LH S ++H DLKPSN ++ D
Sbjct: 109 ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTL 165
Query: 282 HVSDFNISKLLG---VLLPETFTRKKPTIEMIIG 312
+ DF +++ G ++ P TR E+I+G
Sbjct: 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 7e-04
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
L+ SN+ L S++ NLK L GL+LS N+L D+P +I L +L TL L+ N Q
Sbjct: 211 LEELDLSNNSIIELLSSLSNLKNLSGLELSNNKL-EDLPESIGNLSNLETLDLSNN--QI 267
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELN 104
S S SL +L LDLS N+LS +P L L+ L
Sbjct: 268 SSISSLGSLTNLRELDLSGNSLSNALPLIALLLLLLELLL 307
|
Length = 394 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 237 DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
D ++ LA EYLH S ++H DLKP N LLD+DM ++DF +K+L
Sbjct: 100 DEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 8e-04
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 26/167 (15%)
Query: 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLDETN-----VAIKVFNLQLE-RAFRSFDSK 199
L IL+ T EF + +LG+ + G+VYK +++ E VAIK +A + +
Sbjct: 1 LRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 59
Query: 200 CEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG---DFPER----------LNIMI 246
V +V + ++ ++L I + L + +MP G D+ LN +
Sbjct: 60 AYVMASVDNPHVCRLL---GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 116
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+A YL R +VH DL N L+ ++DF ++KLLG
Sbjct: 117 QIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 17/71 (23%)
Query: 233 MPNGD----------FPERL--NIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDM 279
+P GD E + + ++ LA EYLH +G ++H DLKP N L+D +
Sbjct: 75 LPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNG----IIHRDLKPDNILIDSNG 130
Query: 280 VAHVSDFNISK 290
++DF +SK
Sbjct: 131 HLKLTDFGLSK 141
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.001
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
LG G V+ + T VAIK +F + ++ K +RH L+ + A+
Sbjct: 14 LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP-EAFLQEAQIMKKLRHDKLVPLY---AV 69
Query: 221 LILKPWYLSSCVMPNG---DFPE-------RLNIMIDMALAF-EYLHHGRSTPMVHCDLK 269
+ +P Y+ + M G DF + +L ++DMA + + + +H DL+
Sbjct: 70 VSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR 129
Query: 270 PSNNLLDEDMVAHVSDFNISKLL 292
+N L+ +++V ++DF +++L+
Sbjct: 130 AANILVGDNLVCKIADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
LDLS N++ +P + L +L L L+ N +PK +L++L LDLS N +S +
Sbjct: 145 LDLSDNKI-ESLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DL 201
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFIS 130
P +E LS L+EL++S N + I N + S +
Sbjct: 202 PPEIELLSALEELDLSNNSI---IELLSSLSNLKNLSGLE 238
|
Length = 394 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 39.0 bits (91), Expect = 0.002
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
++ALA ++LH S +++ DLKP N LLDE+ ++DF +SK
Sbjct: 106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 146
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.002
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 195 SFDSKCEVHKNVRHRNLIKIL---TTIAILILKPWYLS-----SCVMPNGDFPERL--NI 244
+ S+ E K++ H N+++ L TT L + Y+ SC+ G F E+L
Sbjct: 54 ALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFF 113
Query: 245 MIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
+ YLH S ++H DLK N L+D D + +SDF ISK
Sbjct: 114 TEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISK 156
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.003
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 26/150 (17%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
LG G V++ ++ + T VA+K + F ++ ++ K +RH LI++ A+
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP-KDFLAEAQIMKKLRHPKLIQLY---AV 69
Query: 221 LILK-PWYLSSCVMPNGDFPE----------RLNIMIDMA------LAFEYLHHGRSTPM 263
L+ P Y+ + +M G E +L +IDMA +A+ +
Sbjct: 70 CTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN-----Y 124
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+H DL N L+ E+ + V+DF +++++
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIK 154
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 38/158 (24%), Positives = 67/158 (42%), Gaps = 44/158 (27%)
Query: 159 HLLGTESLGSVYKWIFLDE---TNVAIKVFNLQLERAFRS-FDSK-----CEVHKNVRHR 209
+G+ + G V +D+ VAIK ++ F D+K ++ +++RH
Sbjct: 6 KPIGSGAYGVVCS--AVDKRTGRKVAIK----KISNVFDDLIDAKRILREIKLLRHLRHE 59
Query: 210 NLIKILTTIAILILKP--------WYLSSCVMPNGDF------PERLN------IMIDMA 249
N+I +L IL+P Y+ + +M D P+ L + +
Sbjct: 60 NIIGLLD-----ILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQIL 113
Query: 250 LAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287
+YLH S ++H DLKPSN L++ + + DF
Sbjct: 114 RGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFG 148
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.003
Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 29/158 (18%)
Query: 177 ETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVRHRNLIKILTTIA----------- 219
+ NVAIK + + RA+R + K V H+N+I +L
Sbjct: 42 DRNVAIKKLSRPFQNQTHAKRAYREL----VLMKCVNHKNIISLLNVFTPQKSLEEFQDV 97
Query: 220 --ILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277
++ L L + D ++ M ++LH S ++H DLKPSN ++
Sbjct: 98 YLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKS 154
Query: 278 DMVAHVSDFNISKLLG---VLLPETFTRKKPTIEMIIG 312
D + DF +++ G ++ P TR E+I+G
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 192
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.003
Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 23/155 (14%)
Query: 157 EWHLL---GTESLGSVYKWIFLDETNV-AIKVFNLQLER--AFRSFDSKCEVHKNVRHRN 210
W G + G VY + LD + A+K +Q + + +V + ++H N
Sbjct: 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPN 60
Query: 211 LIKILTTIA----ILILKPW----YLSSCVMPNGDFPERLNIM---IDMALAFEYLH-HG 258
L+K + I + L + E + I + + YLH HG
Sbjct: 61 LVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHV-IRVYTLQLLEGLAYLHSHG 119
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+VH D+KP+N LD + V + DF + L
Sbjct: 120 ----IVHRDIKPANIFLDHNGVIKLGDFGCAVKLK 150
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 34.8 bits (81), Expect = 0.004
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+L+ LDLS+N L+ + + L NLK L++S N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLT 37
|
Length = 60 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 38.1 bits (88), Expect = 0.004
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 21/146 (14%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220
LG G V+ + T VA+K + SF + ++ K +RH L+++ A+
Sbjct: 14 LGNGQFGEVWMGTWNGNTKVAVKTLKPG-TMSPESFLEEAQIMKKLRHDKLVQLY---AV 69
Query: 221 LILKPWYLSSCVMPNG---DF-----------PERLNIMIDMALAFEYLHHGRSTPMVHC 266
+ +P Y+ + M G DF P +++ +A Y+ +H
Sbjct: 70 VSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHR 126
Query: 267 DLKPSNNLLDEDMVAHVSDFNISKLL 292
DL+ +N L+ + +V ++DF +++L+
Sbjct: 127 DLRSANILVGDGLVCKIADFGLARLI 152
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 312 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.98 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 99.97 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.97 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 99.97 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 99.97 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 99.97 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.97 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.96 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 99.96 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 99.96 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.96 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.96 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.96 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.96 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 99.96 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.96 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.95 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.95 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.95 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.95 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 99.95 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.95 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.95 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.95 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.95 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.95 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.95 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.95 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.95 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.95 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.95 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.95 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.95 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.94 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.94 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.94 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.94 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.94 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.94 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.94 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.94 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.94 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.94 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.94 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.94 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.94 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.94 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.94 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.94 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.94 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.94 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.94 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.94 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.94 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.94 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.94 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.94 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.94 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.94 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.94 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.94 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.94 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.94 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.94 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.94 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.93 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.93 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.93 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.93 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.93 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.93 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.93 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 99.93 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.93 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.93 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.93 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.93 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.93 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.93 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.93 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.93 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.93 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.93 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.93 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.93 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.93 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.93 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.93 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.93 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.93 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.93 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.93 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.93 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.93 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.93 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.93 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.93 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.93 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.92 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.92 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.92 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.92 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.92 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.92 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.92 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.92 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.92 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.92 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.92 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.92 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.92 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.92 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.92 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.92 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.92 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.92 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.92 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.92 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.92 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.92 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.92 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.92 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.92 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.92 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.92 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.92 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.92 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.92 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.92 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.92 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.92 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.92 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.92 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.92 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.92 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.92 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.92 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.92 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.92 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.92 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.92 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.92 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.92 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.92 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.92 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.92 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.92 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.92 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.92 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.92 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.92 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.92 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.92 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.92 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.92 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.91 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.91 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.91 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.91 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.91 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.91 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.91 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.91 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.91 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.91 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.91 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.91 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.91 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.91 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.91 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.91 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.91 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.91 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.91 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.91 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.91 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.91 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.91 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.91 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.91 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.91 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.91 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.91 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.91 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.91 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.91 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.91 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.91 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.91 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.91 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.91 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.91 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.91 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.91 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.9 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.9 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.9 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.9 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.9 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.9 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.9 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.9 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.9 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.9 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.9 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.9 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.9 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.9 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.9 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.9 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.9 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.9 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.9 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.9 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.9 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.9 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.9 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.9 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.89 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.89 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.89 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.89 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.89 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.89 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.89 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.89 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.89 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.89 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.89 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.89 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.89 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.89 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.89 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.89 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.89 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.88 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.88 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.88 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.88 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.88 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.88 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.88 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.88 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.87 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.87 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.87 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.87 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.86 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.86 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.86 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.86 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.85 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.85 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.85 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.84 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.84 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.83 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.83 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.83 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.81 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.81 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.8 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.8 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.8 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.79 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.78 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.78 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.78 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.78 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.78 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.76 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.74 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.73 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.73 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.73 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.72 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.7 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.7 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.69 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.69 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.66 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.62 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.58 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.55 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.55 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.53 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.52 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.52 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.48 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.48 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.47 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.46 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 99.44 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.39 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.37 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.37 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.36 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.36 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.33 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.3 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.3 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.27 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.26 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.26 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 99.23 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.18 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 99.17 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.17 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.14 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.14 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.13 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.12 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.11 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.09 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.08 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.08 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.08 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.07 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.07 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.06 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.05 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.05 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.04 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.01 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.0 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.98 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 98.94 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 98.92 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 98.91 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.88 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 98.87 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.86 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 98.83 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.79 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 98.74 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.73 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 98.72 | |
| KOG4579 | 177 | consensus Leucine-rich repeat (LRR) protein associ | 98.68 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.67 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.62 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.55 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.55 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.48 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.47 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.46 | |
| COG1718 | 268 | RIO1 Serine/threonine protein kinase involved in c | 98.46 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 98.45 | |
| PF12799 | 44 | LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ | 98.44 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.42 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.42 | |
| TIGR02172 | 226 | Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou | 98.35 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 98.34 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.34 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 98.33 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.33 | |
| PF01636 | 239 | APH: Phosphotransferase enzyme family This family | 98.32 | |
| PF06176 | 229 | WaaY: Lipopolysaccharide core biosynthesis protein | 98.3 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 98.27 | |
| PF13095 | 207 | FTA2: Kinetochore Sim4 complex subunit FTA2 | 98.26 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-44 Score=364.28 Aligned_cols=300 Identities=29% Similarity=0.431 Sum_probs=247.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++.+|..+.++++|+.|++++|++.+.+|..+..+++|++|+|++|.+++.+|..|+.+++|+.|||
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccccCC------CCCc----h-------
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQD------SKRT----S------- 144 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~~~~------~~~~----~------- 144 (312)
++|+++|.+|..+.++++|+.|++++|++++.+|....+.++....+.+|..+|+... +... .
T Consensus 555 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~ 634 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITC 634 (968)
T ss_pred CCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhH
Confidence 9999999999999999999999999999999999877777777777777777775321 0000 0
Q ss_pred -----------------------------------------------HHHHhhhccccccceEeccCCcEEEEEEEE-cC
Q 036266 145 -----------------------------------------------YLDILQATDEFNEWHLLGTESLGSVYKWIF-LD 176 (312)
Q Consensus 145 -----------------------------------------------~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~ 176 (312)
..........+...+.+|+|+||.||+|+. .+
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~ 714 (968)
T PLN00113 635 TLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKN 714 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCC
Confidence 000011123455567899999999999997 46
Q ss_pred CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC---------HHHHHHHHHH
Q 036266 177 ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD---------FPERLNIMID 247 (312)
Q Consensus 177 ~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~---------~~~~~~i~~~ 247 (312)
++.||||.++.... ....|++.+++++|||||++++++... ...+++|||+++|+ |.++.+++.|
T Consensus 715 ~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~--~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ 788 (968)
T PLN00113 715 GMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSE--KGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIG 788 (968)
T ss_pred CcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcC--CCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHH
Confidence 88899999864322 123468899999999999999999743 45788999999985 4556689999
Q ss_pred HHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh--------------------------------hhhh
Q 036266 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL--------------------------------LGVL 295 (312)
Q Consensus 248 i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~--------------------------------~g~~ 295 (312)
+++|++|||+.++++|+||||||+||+++.++.+++. ||.+.. +|++
T Consensus 789 ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv 867 (968)
T PLN00113 789 IAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLI 867 (968)
T ss_pred HHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHH
Confidence 9999999998778899999999999999988887764 443211 1999
Q ss_pred hhhhhcCCCCCcc
Q 036266 296 LPETFTRKKPTIE 308 (312)
Q Consensus 296 ~~e~~tg~~p~~e 308 (312)
++|++||+.|++.
T Consensus 868 l~el~tg~~p~~~ 880 (968)
T PLN00113 868 LIELLTGKSPADA 880 (968)
T ss_pred HHHHHhCCCCCCc
Confidence 9999999999754
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=272.29 Aligned_cols=151 Identities=37% Similarity=0.540 Sum_probs=135.2
Q ss_pred CCCCchHHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeee
Q 036266 139 DSKRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218 (312)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 218 (312)
....+++.++..++++|...+.||+|+||.||+|...+++.||||++.....+..++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45668999999999999999999999999999999988899999988765432145699999999999999999999999
Q ss_pred eecccccEEEEecccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc
Q 036266 219 AILILKPWYLSSCVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 219 ~~~~~~~~~l~~~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~ 284 (312)
..... ..++++|||++| +|.+|++||.++|+||+|||+.+.++||||||||+|||+|+++++||+
T Consensus 141 ~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 85443 478888899987 588899999999999999999888899999999999999999999999
Q ss_pred cccchh
Q 036266 285 DFNISK 290 (312)
Q Consensus 285 DFG~a~ 290 (312)
|||+|+
T Consensus 220 DFGLa~ 225 (361)
T KOG1187|consen 220 DFGLAK 225 (361)
T ss_pred CccCcc
Confidence 999864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=258.88 Aligned_cols=152 Identities=28% Similarity=0.433 Sum_probs=135.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh--hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ--LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...+|...+.||.|+|++||+|+++ ++..||||.+.+. ..+..+.+..|+++|+.++|||||.+++++.. ..++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~--~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED--DDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec--CCeEE
Confidence 4467888889999999999999976 5788999999876 35566778899999999999999999999884 45789
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC------CceEEccccch
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED------MVAHVSDFNIS 289 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~------~~~kl~DFG~a 289 (312)
++||||.+||+...+ .++.|+|.|+++|| +++||||||||.|||++.. -.+||+|||+|
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 999999999998766 38999999999999 9999999999999999754 46899999999
Q ss_pred hhh-----------------------------------hhhhhhhhcCCCCCc
Q 036266 290 KLL-----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 290 ~~~-----------------------------------g~~~~e~~tg~~p~~ 307 (312)
+.+ |.+++|+++|+.||+
T Consensus 163 R~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~ 215 (429)
T KOG0595|consen 163 RFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFD 215 (429)
T ss_pred hhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcc
Confidence 996 899999999999987
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=245.51 Aligned_cols=153 Identities=22% Similarity=0.296 Sum_probs=135.9
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.+....||+|..|+||+++++ +++.+|+|.+.... +...+++.+|++++++.+||+||++||.|..... .+.+.|
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-~isI~m 157 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-EISICM 157 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-eEEeeh
Confidence 45566789999999999999986 57789999996543 5567889999999999999999999999986655 688999
Q ss_pred cccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|||++|++...+ +|+.+|++||.|||+ +++||||||||+|||++..|++||||||.++.+
T Consensus 158 EYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~ 235 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIAN 235 (364)
T ss_pred hhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcc
Confidence 999999987765 499999999999994 489999999999999999999999999999886
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|.++.|+++|++|+++
T Consensus 236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 8999999999999876
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=256.07 Aligned_cols=156 Identities=25% Similarity=0.327 Sum_probs=137.9
Q ss_pred hhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...+.|+..+.||+|+||.||+|+. .+|+.||+|++..+. +.......+||.+|++|+||||+++.+.........+
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si 193 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI 193 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence 3455688889999999999999995 578999999998765 4455667899999999999999999999887767789
Q ss_pred EEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
||++|||+.. +.++...++.|++.||+||| .++|+|||||.+|||||++|.+||+|||+|+++
T Consensus 194 YlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 194 YLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999999864 56777889999999999999 999999999999999999999999999999976
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.||++|++.+++
T Consensus 271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC
Confidence 8888888888887764
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=238.67 Aligned_cols=135 Identities=20% Similarity=0.251 Sum_probs=116.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
+.|+....+|+|+||.||+|+.+ +|+.||||++.... +...+-..+|+++|++++|+|+|.++++|. ....++++
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr--rkrklhLV 79 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR--RKRKLHLV 79 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH--hcceeEEE
Confidence 56778889999999999999976 58999999997543 345566789999999999999999999997 45567777
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||+.. +-....++..|+++|+.||| +++||||||||+|||++.++.+|+||||+|+.+
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTL 151 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhh
Confidence 7787643 33344579999999999999 999999999999999999999999999999997
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-34 Score=244.51 Aligned_cols=137 Identities=25% Similarity=0.386 Sum_probs=118.2
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhH-------hHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLER-------AFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
..+.|...+.+|+|+||.|-+|.. ++|+.||||++.++... ......+|+++|++++|||||+++++|..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 456678889999999999999985 47899999999875411 1233569999999999999999999998554
Q ss_pred cccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEcccc
Q 036266 223 LKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSDFN 287 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~DFG 287 (312)
..||+|||+++|++.+++ -++.|++.|+.||| ++||+||||||+|||+..+ ..+||+|||
T Consensus 250 --s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 --SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred --ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccc
Confidence 458889999999998876 39999999999999 9999999999999999755 789999999
Q ss_pred chhhh
Q 036266 288 ISKLL 292 (312)
Q Consensus 288 ~a~~~ 292 (312)
+|+..
T Consensus 325 lAK~~ 329 (475)
T KOG0615|consen 325 LAKVS 329 (475)
T ss_pred hhhcc
Confidence 99996
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=238.04 Aligned_cols=153 Identities=27% Similarity=0.421 Sum_probs=135.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+++.+ +++.+|+|++++.. ....+...+|..+|.+++||.||++.-.|+ +...+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ--t~~kL 100 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQ--TEEKL 100 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecc--cCCeE
Confidence 4567999999999999999999965 57889999998764 234566788999999999999999998888 56678
Q ss_pred EEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
|++++|+.||++...+ -++.+|+.||.||| +.+||||||||+|||+|++|+++|+|||+++..
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999876554 28999999999999 999999999999999999999999999999963
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|++||..
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~ 227 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA 227 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence 9999999999999863
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-33 Score=249.38 Aligned_cols=151 Identities=22% Similarity=0.359 Sum_probs=136.2
Q ss_pred cccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..|...+++|+|+|+.+|.++. .+|..||+|++.+.. ....+.+.+||+++++|+|||||+++++|+ +..++|+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FE--Ds~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFE--DSNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEee--cCCceEE
Confidence 5799999999999999999997 679999999998743 445677889999999999999999999999 6667888
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+.|+|++|++.+.+ .+++||+.|+.||| +.+|||||||..|++++++.++||+|||+|..+
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 88899999776544 59999999999999 899999999999999999999999999999886
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++|-++.|++||..
T Consensus 173 Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFet 220 (592)
T KOG0575|consen 173 ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFET 220 (592)
T ss_pred cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCccc
Confidence 8999999999999864
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=228.70 Aligned_cols=155 Identities=25% Similarity=0.357 Sum_probs=129.4
Q ss_pred cccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.+|...+.+|+|+||.||+|++ .+|+.||||+++... +.......+|++.|+.++|+||+.+.++|.. ...+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~--~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPH--KSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccC--CCceEEE
Confidence 4677788999999999999996 478999999998654 2234567899999999999999999999984 4456677
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhhh----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG---- 293 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~g---- 293 (312)
.|||+.. +-.+...++.++++|++||| .+.|+||||||.|+|++.+|.+|++|||+|+.+|
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 7799853 33445579999999999999 9999999999999999999999999999999985
Q ss_pred hhhhhhhcCCCCCcccccC
Q 036266 294 VLLPETFTRKKPTIEMIIG 312 (312)
Q Consensus 294 ~~~~e~~tg~~p~~e~~~~ 312 (312)
...+.++|+||.+||++.|
T Consensus 157 ~~~~~V~TRWYRAPELLfG 175 (318)
T KOG0659|consen 157 IQTHQVVTRWYRAPELLFG 175 (318)
T ss_pred ccccceeeeeccChHHhcc
Confidence 2334478888888887765
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-32 Score=239.46 Aligned_cols=134 Identities=28% Similarity=0.431 Sum_probs=113.0
Q ss_pred cccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 155 FNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
+...+.+|+|+||+||+|.++....||||++.... ....++|.+|+.+|++++|||||+++|++..+.. .++++|||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~-~~~iVtEy 121 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG-SLCIVTEY 121 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC-ceEEEEEe
Confidence 34445699999999999998654459999998643 2226689999999999999999999999874332 58899999
Q ss_pred cCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCC-ceecCCCCCCeeeCCCC-ceEEccccchhhh
Q 036266 233 MPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTP-MVHCDLKPSNNLLDEDM-VAHVSDFNISKLL 292 (312)
Q Consensus 233 ~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~-iiHrDlkp~Nill~~~~-~~kl~DFG~a~~~ 292 (312)
+++|++. .+++++.|||+|+.||| +.+ ||||||||+|||++.++ ++||+|||+++..
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999654 44579999999999999 677 99999999999999997 9999999999663
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-32 Score=240.19 Aligned_cols=155 Identities=27% Similarity=0.393 Sum_probs=137.2
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILIL 223 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 223 (312)
.....+|...+.+|+|+|++|++|+.. ++++||||++.+.. +...+.+.+|-.+|.+| .||.|++++-.|. +.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ--D~ 146 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ--DE 146 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEee--cc
Confidence 445678999999999999999999964 68899999998753 34455677888999999 7999999999888 66
Q ss_pred ccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 224 KPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..+|+++||+++|++.+.+ -++.+|+.||+||| .+|||||||||+|||+|+++++||+|||.|+.
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccccc
Confidence 7789999999999987766 38999999999999 99999999999999999999999999999998
Q ss_pred h-------------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L-------------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~-------------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ ||+++.|+.|++||-.
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence 6 9999999999999854
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-33 Score=227.25 Aligned_cols=155 Identities=23% Similarity=0.351 Sum_probs=132.6
Q ss_pred cccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.+|++.+.||.|+||.||++.. .+|..||.|.++-.. .+..+.+..|+.+|++|+|||||+++++-...+..-++++
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4588889999999999999984 588899999997543 4566778999999999999999999985444444557889
Q ss_pred ecccCCCCHHHHH----------------HHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDFPERL----------------NIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~~~~~----------------~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||+|+.||+.+.+ +++.|++.||.+||+-. +. |+||||||+||+++.+|.+|++|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999987755 58999999999999421 44 99999999999999999999999999999
Q ss_pred h------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++||..-+.||.+
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g 230 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYG 230 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccc
Confidence 6 8999999998888753
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=218.34 Aligned_cols=152 Identities=30% Similarity=0.396 Sum_probs=134.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.+|.|+||.|..++.+ +|..+|+|+++++.- +..+...+|..+|+.+.||.++++++.+. +...+
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~--d~~~l 119 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK--DNSNL 119 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec--cCCeE
Confidence 3457888999999999999999975 577799999987652 23344678999999999999999999887 67789
Q ss_pred EEEecccCCCCHHHHHH------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPERLN------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~~------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+|+|||+++|.+...++ ++.||+.|++||| ++.|++||+||||||+|.+|.+||+|||+|+.+
T Consensus 120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999998776553 9999999999999 899999999999999999999999999999985
Q ss_pred -------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++.+||+.|..||-
T Consensus 197 rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 197 RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999974
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=224.35 Aligned_cols=140 Identities=19% Similarity=0.280 Sum_probs=120.2
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhH--hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLER--AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...++|+....|++|+||.||+|+++ +++.||+|+++.+.+. ..-.-.+||.+|.+++|||||.+-++........+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 34567888899999999999999975 5788999999876532 12234789999999999999999999887777789
Q ss_pred EEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|++||||+.. ...+...++.|+++|++||| ...|+||||||+|+|+.+.|.+||+|||+||.+
T Consensus 153 y~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 153 YIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhh
Confidence 9999999864 22344469999999999999 889999999999999999999999999999998
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=230.15 Aligned_cols=138 Identities=22% Similarity=0.308 Sum_probs=122.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...++|+....||+|+||.||.|+-+ +|..+|+|++++.. ......+..|-.+|...++|.||+++-.|. +..+
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQ--D~~~ 215 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQ--DKEY 215 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEec--CCCe
Confidence 35678999999999999999999955 68899999998754 233455778999999999999999999888 6678
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|++|||++|||+.+.+ .++.+++.|++-+| +.|+|||||||+|+|||..|++||+|||+++-+
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchh
Confidence 99999999999987765 48999999999999 999999999999999999999999999998653
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=234.83 Aligned_cols=154 Identities=31% Similarity=0.494 Sum_probs=133.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.....+...+.||+|-||.||.|.+.....||+|.++.. ....+.|.+|+++|++|+|+|||+++++|... ..++|+
T Consensus 203 i~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~--~piyIV 279 (468)
T KOG0197|consen 203 IPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ--EPIYIV 279 (468)
T ss_pred ecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecC--CceEEE
Confidence 344456678899999999999999977778999999865 33446788999999999999999999999843 379999
Q ss_pred ecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
||||+.|++.+. +.++.|||+|++||. ++++|||||-++|||++++..+||+|||+||..
T Consensus 280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 999999976544 469999999999999 999999999999999999999999999999974
Q ss_pred ----------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ----------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ----------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.|++.+
T Consensus 357 ~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m 408 (468)
T KOG0197|consen 357 EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM 408 (468)
T ss_pred ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC
Confidence 999999998 46666665
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=235.55 Aligned_cols=149 Identities=24% Similarity=0.452 Sum_probs=133.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
+++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.. ++..+.+.+|++++++++|||||.++++|+ ....+++
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfE--t~~~~~v 78 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFE--TSAHLWV 78 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhc--ccceEEE
Confidence 357888899999999999999976 46789999998754 556778999999999999999999999998 4567888
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+.||+.+ ++.+.+ .++.+++.||.||| +.+|+|||+||.|||++..+.+|++|||+|+..
T Consensus 79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t 154 (808)
T KOG0597|consen 79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT 154 (808)
T ss_pred Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence 9999987 665544 69999999999999 999999999999999999999999999999985
Q ss_pred --------------------------------hhhhhhhhcCCCCC
Q 036266 293 --------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~ 306 (312)
|+++||+++|++||
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF 200 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPF 200 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCc
Confidence 99999999999997
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=225.01 Aligned_cols=149 Identities=23% Similarity=0.324 Sum_probs=123.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---ccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL---KPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~~ 227 (312)
.-.|...+.+|.|+||.||+|... +++.||||+...+.. .-.+|.++|++++|||||++.-+|..... .+..
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 445777899999999999999964 568899999976532 23579999999999999999988865443 3677
Q ss_pred EEecccCCCCHHHHH----------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchh
Q 036266 228 LSSCVMPNGDFPERL----------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~~~~~~----------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~ 290 (312)
++|||||.. +.+.+ -++.|+.+|++||| ..+|+||||||.|+|+|. .|.+||||||.|+
T Consensus 99 lVleymP~t-L~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPET-LYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchHH-HHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 889999863 33322 38999999999999 899999999999999995 5999999999999
Q ss_pred hh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.+ |+++.||+-|+.-|++
T Consensus 175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 86 8888888888877764
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=226.85 Aligned_cols=140 Identities=24% Similarity=0.341 Sum_probs=122.7
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhH--------------hHHHHHHHHHHhhcCCCCceeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLER--------------AFRSFDSKCEVHKNVRHRNLIKI 214 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~niv~~ 214 (312)
...++|+..+.||+|.||.|-+|+.. +++.||||++.+.... ..+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 45578999999999999999999965 6888999999764210 12467899999999999999999
Q ss_pred eeeeeecccccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceE
Q 036266 215 LTTIAILILKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAH 282 (312)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~k 282 (312)
+++...+....+||++|||..| +..+..+|+++++.||+||| .++||||||||+|+|++++|++|
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcEE
Confidence 9999888889999999999988 23566789999999999999 89999999999999999999999
Q ss_pred Eccccchhhh
Q 036266 283 VSDFNISKLL 292 (312)
Q Consensus 283 l~DFG~a~~~ 292 (312)
|+|||.+..+
T Consensus 251 IsDFGVs~~~ 260 (576)
T KOG0585|consen 251 ISDFGVSNEF 260 (576)
T ss_pred eeccceeeec
Confidence 9999988743
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=221.76 Aligned_cols=158 Identities=23% Similarity=0.302 Sum_probs=130.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--HhHHHHHHHHHHhhcCCCCc-eeeeeeeeeecc----c
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--RAFRSFDSKCEVHKNVRHRN-LIKILTTIAILI----L 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~----~ 223 (312)
...|...+.+|+|+||.||+|+.. +|+.||+|++....+ .......+|+.++++++|+| ||.+++++.... .
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 455777788999999999999964 688999999987643 24456789999999999999 999999987543 2
Q ss_pred ccEEEEecccCC---------------CCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 224 KPWYLSSCVMPN---------------GDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 224 ~~~~l~~~~~~~---------------g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
..+++++||++. .+-.....++.|+++|++||| +++|+||||||.|||++++|.+||+|||+
T Consensus 90 ~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 90 GKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred ceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 367788887653 233446679999999999999 99999999999999999999999999999
Q ss_pred hhhhh----hhhhhhhcCCCCCcccccC
Q 036266 289 SKLLG----VLLPETFTRKKPTIEMIIG 312 (312)
Q Consensus 289 a~~~g----~~~~e~~tg~~p~~e~~~~ 312 (312)
|+.++ ...+|+.|++|.+||++.|
T Consensus 167 Ara~~ip~~~yt~evvTlWYRaPEvLlG 194 (323)
T KOG0594|consen 167 ARAFSIPMRTYTPEVVTLWYRAPEVLLG 194 (323)
T ss_pred HHHhcCCcccccccEEEeeccCHHHhcC
Confidence 99874 2457788888888877665
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=223.90 Aligned_cols=153 Identities=23% Similarity=0.296 Sum_probs=134.1
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...+|+..+.+|+|+||.|-+|.. ..|+.||||.|+++. +++.-.+.+|+++|+.|+||||+++|++|+ ....+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFE--NkdKI 128 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFE--NKDKI 128 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhc--CCceE
Confidence 345688888999999999999984 679999999998764 556667899999999999999999999998 55678
Q ss_pred EEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||..+|++.+.+ .+++||+.|+.||| +++++|||||.+|||+|+++++||+|||++-.+
T Consensus 129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999776554 59999999999999 999999999999999999999999999999876
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++|.++-|..||++
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 7777777777777764
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=227.82 Aligned_cols=138 Identities=26% Similarity=0.362 Sum_probs=119.3
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh----h-HhHHHHHHHHHHhhcCC-CCceeeeeeeeeecc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL----E-RAFRSFDSKCEVHKNVR-HRNLIKILTTIAILI 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 222 (312)
.....|...+.+|+|+||.|+.|... ++..||+|+++... . ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568899999999999999999864 67899999877641 1 23455678999999999 999999999998554
Q ss_pred cccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccch
Q 036266 223 LKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNIS 289 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a 289 (312)
. ++++|||+.+|++.+.+ +++.|++.|++||| +++|+||||||+|||+|.+ +.+||+|||++
T Consensus 94 ~--~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 K--IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred e--EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 4 89999999999876654 59999999999999 9999999999999999998 99999999999
Q ss_pred hhh
Q 036266 290 KLL 292 (312)
Q Consensus 290 ~~~ 292 (312)
...
T Consensus 169 ~~~ 171 (370)
T KOG0583|consen 169 AIS 171 (370)
T ss_pred ccc
Confidence 854
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-30 Score=208.65 Aligned_cols=155 Identities=26% Similarity=0.307 Sum_probs=133.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...++|++++.+|+|.||.||.|+.+ ++-.||+|++-+.. .+...++.+|+++.+.|+||||.++|++|. +...
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fh--d~~r 96 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFH--DSKR 96 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhee--ccce
Confidence 34567999999999999999999965 56789999997643 345677899999999999999999999998 5667
Q ss_pred EEEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|+.+||.+.|++...+ .++.|+|.|+.|+| .++||||||||+|+|++.++..|++|||.+-.
T Consensus 97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 88888899999765443 49999999999999 99999999999999999999999999997644
Q ss_pred h----------------------------------hhhhhhhhcCCCCCccc
Q 036266 292 L----------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 292 ~----------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
- |+..+|++.|..||...
T Consensus 174 ~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~ 225 (281)
T KOG0580|consen 174 APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ 225 (281)
T ss_pred cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence 2 88899999999998654
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=218.94 Aligned_cols=154 Identities=26% Similarity=0.387 Sum_probs=130.1
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++...+.+|+|+||.||.+...+ |...|||.+........+.+.+|+.+|++++|||||+++|.........+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 3457778899999999999999754 888999999865433367789999999999999999999974432324678888
Q ss_pred cccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchhhh----
Q 036266 231 CVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~~~---- 292 (312)
||+++|++.+. .++.+||++||+||| +++||||||||+|||++. ++.+||+|||+|+..
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999876543 469999999999999 999999999999999999 799999999988743
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++..||+||+.||.+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 7888899999888876
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-30 Score=228.02 Aligned_cols=138 Identities=23% Similarity=0.278 Sum_probs=118.9
Q ss_pred hhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHH--HHHHHHHhhcCC-CCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRS--FDSKCEVHKNVR-HRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 225 (312)
..+++|...+.+|.|+||.||+|+. .++..||||++++.... .++ -.||+..|+++. |||||++.+.+.+.+. .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~-~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR-I 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc-e
Confidence 3467899999999999999999995 46888999999865422 222 368999999999 9999999999886554 8
Q ss_pred EEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++++||||+.. +..+...|+.||++||+|+| ++|+.|||+||||||+.....+||+|||+||.+
T Consensus 85 L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 85 LYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred EeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccc
Confidence 99999999854 45566789999999999999 999999999999999998889999999999996
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=226.75 Aligned_cols=155 Identities=23% Similarity=0.382 Sum_probs=133.6
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
..+.....+++.....||+|+||+||+|+|.. .||||+++... ....+.|..|+.++++-+|.||+-++||+..+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 35555666777888999999999999999743 59999998754 456788999999999999999999999997443
Q ss_pred cccEEEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 223 LKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
+.++.-+|.+.++ .+.+.|++|||+|+.||| .++|||||||..||++++++.+||+|||++
T Consensus 462 ---~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 462 ---LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ---eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccce
Confidence 3677778988754 445689999999999999 999999999999999999999999999998
Q ss_pred hhh-----------------------------------------hhhhhhhhcCCCCCc
Q 036266 290 KLL-----------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 290 ~~~-----------------------------------------g~~~~e~~tg~~p~~ 307 (312)
..- |++.||++||..||.
T Consensus 536 tvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 536 TVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred eeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 662 999999999999985
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=217.82 Aligned_cols=152 Identities=26% Similarity=0.351 Sum_probs=130.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~ 94 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD--ENRVY 94 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc--CCEEE
Confidence 457888999999999999999975 57889999997643 2334568899999999999999999998874 45688
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999775543 47899999999999 899999999999999999999999999988642
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 8899999999998753
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=211.67 Aligned_cols=155 Identities=21% Similarity=0.344 Sum_probs=136.3
Q ss_pred hhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...+.|+....||.|..++||+|+. +.+..||||+++.+. ....+.+.+|+..|+.++||||++++..|. ....+|
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv--v~~~LW 100 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV--VDSELW 100 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE--ecceeE
Confidence 4556789999999999999999995 567889999998765 345688999999999999999999998887 456789
Q ss_pred EEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 228 LSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++|.||.+|+..+.+ .|.+++++||.||| .+|.||||||+.|||+|.+|.+||+|||.+-.+
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 999999999887765 38899999999999 999999999999999999999999999865432
Q ss_pred -----------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+.+.|+.+|..||.++
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~ 235 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKY 235 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccC
Confidence 88999999999998764
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=219.93 Aligned_cols=138 Identities=19% Similarity=0.274 Sum_probs=118.3
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
....++|+..+.||+|+||.||+++.. +++.||+|++.+.. ......+.+|+.+++.++||||+++++++. ...
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~--~~~ 116 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ--DDK 116 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCC
Confidence 344578999999999999999999975 57889999997532 223455778999999999999999999887 455
Q ss_pred cEEEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 225 PWYLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.++++|||+++|++.+.+ .++.|++.||+||| +++|+||||||+|||+++++.+||+|||+|+.
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence 689999999999776543 58899999999999 89999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=218.88 Aligned_cols=133 Identities=20% Similarity=0.318 Sum_probs=115.1
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|... +++.||+|+++... ......+.+|+.++.+++||||+++++.+. +...+++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--~~~~~~l 78 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--DKLNLYL 78 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe--cCCeEEE
Confidence 36888999999999999999865 57889999997643 233456788999999999999999999887 4456889
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcc
Confidence 99999999765543 58999999999999 8999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=213.64 Aligned_cols=151 Identities=28% Similarity=0.371 Sum_probs=129.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. +....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~l 78 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--DQRFLYM 78 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc--cCCeEEE
Confidence 36888899999999999999975 57889999997543 233456788999999999999999998876 4457889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.+. ..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999976554 358999999999999 899999999999999999999999999987642
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD 200 (291)
T ss_pred ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999998754
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=219.77 Aligned_cols=133 Identities=22% Similarity=0.308 Sum_probs=115.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|...+.||+|+||.||++... +++.||||++.... ....+.+.+|++++++++||||+++++++. +....++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~--~~~~~~l 78 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ--DAQYLYL 78 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE--cCCeeEE
Confidence 36888899999999999999865 67889999987542 234456788999999999999999999987 4456889
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+|++|||+|+
T Consensus 79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999876543 48899999999999 8999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=216.68 Aligned_cols=153 Identities=27% Similarity=0.365 Sum_probs=129.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcC--CcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD--ETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|.+.. +..||+|++.... ......+.+|+++++.++||||+++++++.. ...
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~~~ 105 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--ESY 105 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe--CCE
Confidence 34578889999999999999998643 3579999997543 2334567889999999999999999999874 456
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
.+++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 88999999999765543 58999999999999 899999999999999999999999999998642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|..||..
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 183 TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 8889999999998753
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.8e-29 Score=209.70 Aligned_cols=138 Identities=23% Similarity=0.313 Sum_probs=116.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeeh--hhhHhHHHHHHHHHHhhcCCCCceeeeeeeeee---cccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNL--QLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI---LILK 224 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---~~~~ 224 (312)
....|...+.+|+|+||.|+.|..+ +|+.||||++.. +.....++..+|+++++.++|+||+.+.+.+.. ....
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3445666789999999999999965 688899999973 345567788999999999999999999998865 3456
Q ss_pred cEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+|+++|+|+ .|+.+.+ -++.|+++||.|+| +.+|+|||+||+|++++.+...||+|||+|+..
T Consensus 100 DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeec
Confidence 7899999984 3443333 37899999999999 899999999999999999999999999999875
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=218.12 Aligned_cols=154 Identities=23% Similarity=0.336 Sum_probs=127.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|.+. +++.||||+++... ......+.+|+.+++++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP- 83 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-
Confidence 4567899999999999999999741 24579999997543 33446788999999999 899999999987643
Q ss_pred cccEEEEecccCCCCHHHH-------------------------------------------------------------
Q 036266 223 LKPWYLSSCVMPNGDFPER------------------------------------------------------------- 241 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~------------------------------------------------------------- 241 (312)
...++++|||+++|++.+.
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 3457888999999977533
Q ss_pred -------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------------
Q 036266 242 -------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------------- 292 (312)
Q Consensus 242 -------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------------- 292 (312)
++++.|+++||+||| +++|+||||||+||++++++.+||+|||+|+..
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 347889999999999 899999999999999999999999999988631
Q ss_pred ----------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ----------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ----------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |..|++.
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~ 279 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 279 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCC
Confidence 888888886 8888764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=222.07 Aligned_cols=150 Identities=20% Similarity=0.360 Sum_probs=133.5
Q ss_pred ccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
...|.....+|+|+.|.||.|+. .+++.||||++........+-+.+|+.+|+..+|+|||.+++.|... ..+|.+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLWVVM 349 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELWVVM 349 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc--ceeEEEE
Confidence 35677888999999999999985 46788999999987666666788999999999999999999987643 6689999
Q ss_pred cccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
|||++|++.+. ..|++++++||+||| ..+|+|||||.+|||++.+|.+||+|||++..+
T Consensus 350 Eym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR 426 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR 426 (550)
T ss_pred eecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence 99999976544 369999999999999 999999999999999999999999999998875
Q ss_pred -----------------------------hhhhhhhhcCCCCC
Q 036266 293 -----------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~ 306 (312)
|+|+.||+.|.+||
T Consensus 427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPY 469 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPY 469 (550)
T ss_pred ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCc
Confidence 99999999999997
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=211.45 Aligned_cols=151 Identities=23% Similarity=0.285 Sum_probs=126.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++||||+++++++.. ....+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHT--ERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcC--CCeEEEE
Confidence 356888999999999999999965 57889999997543 2233467789999999999999999998873 4467888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||+++. +..+...++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 9998752 23344568999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.||+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~ 205 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFP 205 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 888889999988875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.5e-28 Score=218.34 Aligned_cols=131 Identities=21% Similarity=0.317 Sum_probs=114.1
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.|...+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.. ...++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--KDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CCEEEEE
Confidence 5788899999999999999864 57889999997643 2344568899999999999999999999874 4568899
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
|||+++|++.+.+ .++.|++.||+||| ..+|+||||||+|||++.++.+||+|||++
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCC
Confidence 9999999875543 48899999999999 899999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-28 Score=214.92 Aligned_cols=151 Identities=26% Similarity=0.331 Sum_probs=130.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+.. +++.||||+++... ......+.+|+++++.++||||+++++++. .....++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--~~~~~~l 78 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--DDEYLYL 78 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE--cCCEEEE
Confidence 36888999999999999999976 57889999998653 234456788999999999999999999887 4456889
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 79 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~ 155 (333)
T cd05600 79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYA 155 (333)
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccccc
Confidence 99999999776654 48899999999999 899999999999999999999999999988642
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|..|+..
T Consensus 156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 200 (333)
T cd05600 156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG 200 (333)
T ss_pred CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC
Confidence 8899999999999854
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-28 Score=212.03 Aligned_cols=152 Identities=21% Similarity=0.275 Sum_probs=127.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++||||+++++++.. ....+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEec--CCeEEEE
Confidence 467899999999999999999975 67889999997543 2223456789999999999999999999874 4567888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||++++ +..+...++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 158 (303)
T cd07869 82 FEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH 158 (303)
T ss_pred EECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence 8998643 22344568999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 159 TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988864
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=213.16 Aligned_cols=144 Identities=23% Similarity=0.255 Sum_probs=123.1
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++. ....++++|||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--~~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--THDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE--cCCEEEEEEeCCC
Confidence 36899999999999965 68889999998643 233456778999999999999999999887 4456889999999
Q ss_pred CCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 235 NGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 235 ~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
+|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~ 155 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccce
Confidence 9976543 358899999999999 899999999999999999999999999988642
Q ss_pred --------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.||.
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 196 (323)
T cd05571 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence 888999999998874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=218.00 Aligned_cols=131 Identities=19% Similarity=0.307 Sum_probs=114.2
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++.+.. ...++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CCEEEEE
Confidence 5788899999999999999965 57889999997643 2344568889999999999999999999874 4568899
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla 148 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 148 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCC
Confidence 9999999776543 47899999999999 889999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=208.93 Aligned_cols=150 Identities=20% Similarity=0.272 Sum_probs=127.3
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++|++|+++++++.. ....+++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc--CCeEEEE
Confidence 3677889999999999999964 68899999987543 2233457789999999999999999998873 4468889
Q ss_pred ecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||+++|++.. ...++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 99999987643 3458899999999999 899999999999999999999999999988642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 203 (285)
T cd05631 156 ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK 203 (285)
T ss_pred CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence 8899999999999853
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=220.80 Aligned_cols=157 Identities=26% Similarity=0.373 Sum_probs=133.3
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcC--C--cE-EEEEEeehh---hhHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLD--E--TN-VAIKVFNLQ---LERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
++...++....+.+|+|+||.||+|.++. + .. ||||..+.. ......++.+|+++|++++|||||+++|++.
T Consensus 152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 33444555666899999999999999653 2 23 899998852 2566788999999999999999999999877
Q ss_pred ecccccEEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 220 ILILKPWYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
...+++++||+|++|++. ++++++.++|.||+||| ++++|||||-.+|+|++.++.+||+||
T Consensus 232 --~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 232 --LEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred --CCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCcc
Confidence 667789999999999654 45579999999999999 999999999999999999999999999
Q ss_pred cchhhh------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 287 NISKLL------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 287 G~a~~~------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|+++.- |++++|+++ |..|++++
T Consensus 307 GLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 307 GLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred ccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence 998763 889999998 67788875
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.7e-28 Score=218.31 Aligned_cols=131 Identities=19% Similarity=0.298 Sum_probs=114.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++.+. +...++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--~~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQ--DKDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEE--cCCEEEEE
Confidence 6888999999999999999965 57889999997543 223456788999999999999999999887 44578899
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
|||+++|++.+.+ .++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a 148 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 148 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCC
Confidence 9999999876654 47899999999999 899999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=217.20 Aligned_cols=136 Identities=20% Similarity=0.293 Sum_probs=116.8
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...++|+..+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.++||||+++++++. +...
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~--~~~~ 117 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ--DDKY 117 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--cCCE
Confidence 34568999999999999999999975 57889999997532 223345778999999999999999998887 4556
Q ss_pred EEEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 226 WYLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
.+++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 88999999999776543 47899999999999 8999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=216.15 Aligned_cols=141 Identities=18% Similarity=0.265 Sum_probs=119.8
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
.+.....++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++.+.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-- 113 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 113 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 344556689999999999999999999976 57889999997532 233455778999999999999999999887
Q ss_pred ccccEEEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 222 ILKPWYLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
.....+++|||+++|++.+.+ .++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 114 DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 455689999999999776543 48899999999999 8999999999999999999999999999875
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 191 ~ 191 (371)
T cd05622 191 K 191 (371)
T ss_pred E
Confidence 3
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=215.97 Aligned_cols=133 Identities=20% Similarity=0.287 Sum_probs=115.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++. ....+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--~~~~~~l 78 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--DENYLYL 78 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--cCCeEEE
Confidence 36888999999999999999975 57889999998643 233456788999999999999999999887 4556889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 149 (364)
T cd05599 79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT 149 (364)
T ss_pred EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccce
Confidence 9999999976554 358999999999999 8999999999999999999999999999863
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=224.92 Aligned_cols=150 Identities=28% Similarity=0.369 Sum_probs=126.3
Q ss_pred cccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----cccEEE
Q 036266 155 FNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----LKPWYL 228 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~~~~l 228 (312)
+...+.+|+|+||.||+|+. .+|+.||||.++... ....+...+|++++++++|||||++++.-.... ...-++
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 33456899999999999995 479999999998743 334566788999999999999999998754433 445688
Q ss_pred EecccCCCCHHHHH---------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCC--ceEEccccch
Q 036266 229 SSCVMPNGDFPERL---------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDM--VAHVSDFNIS 289 (312)
Q Consensus 229 ~~~~~~~g~~~~~~---------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~--~~kl~DFG~a 289 (312)
+||||.+||+..++ .+..+++.|+.||| +++||||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 99999999887655 58999999999999 99999999999999984 334 4799999999
Q ss_pred hhh------------------------------------hhhhhhhhcCCCCCc
Q 036266 290 KLL------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 290 ~~~------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|.+ |++++|++||..||.
T Consensus 172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 985 999999999999985
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=211.60 Aligned_cols=144 Identities=24% Similarity=0.273 Sum_probs=123.1
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
+.||+|+||.||+++.. +++.||+|++.... ......+.+|++++++++||||+++++++. ....++++|||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--TKDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE--cCCEEEEEEeCCC
Confidence 36899999999999965 57889999998643 234456788999999999999999998887 4456789999999
Q ss_pred CCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 235 NGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 235 ~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
+|++.. ...++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~ 155 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTF 155 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccc
Confidence 986643 3468999999999999 899999999999999999999999999987641
Q ss_pred --------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 888899999998874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-28 Score=221.26 Aligned_cols=151 Identities=23% Similarity=0.297 Sum_probs=132.8
Q ss_pred cccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.-|+.++.+|.|+.|.|-.|++ .+|+.+|||++.+.. ......+.+|+.+|+-+.||||+++|+.+. ....+|+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe--~~~~lyl 89 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE--NKQHLYL 89 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec--cCceEEE
Confidence 3467788999999999999996 479999999998753 233456889999999999999999999988 5667888
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+.||+++|.+... .+++.||+.|+.||| ..+|+|||+||+|+|+|.++.+||+|||+|..-
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 8889999977554 479999999999999 889999999999999999999999999999874
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++-++||+.||++
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 9999999999999975
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=210.18 Aligned_cols=143 Identities=24% Similarity=0.266 Sum_probs=122.3
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++++++||||+++++++. .....+++|||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ--SPEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe--cCCeEEEEEcCCCCC
Confidence 689999999999975 57889999997542 234456788999999999999999999887 445678999999999
Q ss_pred CHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------
Q 036266 237 DFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------ 292 (312)
Q Consensus 237 ~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------ 292 (312)
++.+. ..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 155 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG 155 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence 77544 358999999999999 899999999999999999999999999988641
Q ss_pred ------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||.+
T Consensus 156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 8889999999998753
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=210.84 Aligned_cols=144 Identities=23% Similarity=0.262 Sum_probs=123.2
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
+.||+|+||.||+++.. +++.||+|+++... ......+.+|++++++++||||+++++++.. ...++++|||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEEEeCCC
Confidence 36899999999999965 68899999998643 2334567789999999999999999998874 456889999999
Q ss_pred CCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 235 NGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 235 ~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
+|++... ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 155 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF 155 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccc
Confidence 9976443 458999999999999 899999999999999999999999999987641
Q ss_pred --------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 196 (323)
T cd05595 156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCC
Confidence 889999999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=190.28 Aligned_cols=155 Identities=21% Similarity=0.308 Sum_probs=128.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.+|...+.||+|+||+||+|+.+ +++.||+|.++.+. +.......+|+.+++.++|.|||++++... ....+.++
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh--sdkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH--SDKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc--cCceeEEe
Confidence 35666789999999999999954 57789999998654 344566789999999999999999999876 34556777
Q ss_pred ecccCC----------C--CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhhhhh--
Q 036266 230 SCVMPN----------G--DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVL-- 295 (312)
Q Consensus 230 ~~~~~~----------g--~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~g~~-- 295 (312)
+|||+. | +......++.|+++|+.|+| ++++.|||+||.|.|++.+|+.|++|||+|+.+|+.
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 778763 3 44455679999999999999 899999999999999999999999999999998643
Q ss_pred --hhhhhcCCCCCcccccC
Q 036266 296 --LPETFTRKKPTIEMIIG 312 (312)
Q Consensus 296 --~~e~~tg~~p~~e~~~~ 312 (312)
..|++|-++..|+++.|
T Consensus 157 cysaevvtlwyrppdvlfg 175 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFG 175 (292)
T ss_pred eeeceeeeeeccCcceeee
Confidence 36778888777777654
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=217.45 Aligned_cols=154 Identities=24% Similarity=0.334 Sum_probs=133.2
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILIL 223 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 223 (312)
....++|...+.+|+|.||.|+.+..+ +++.+|||+++++. ....+....|.+++... +||.++.++..|.. .
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT--~ 441 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT--K 441 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc--C
Confidence 345678999999999999999999976 57789999999864 34556677888887666 49999999999984 5
Q ss_pred ccEEEEecccCCCCH-----------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 224 KPWYLSSCVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++++|||+.+||+ ....-|+..|+.||+||| +++||+||||.+|||+|.+|.+||+|||+++..
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred CeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 568888999999964 223349999999999999 999999999999999999999999999999884
Q ss_pred ------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||+.|.+||+
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence 999999999999998
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-27 Score=210.56 Aligned_cols=152 Identities=22% Similarity=0.305 Sum_probs=125.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---cccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~~~ 227 (312)
+|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.... ...++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4778899999999999999965 67889999987432 233456889999999999999999999875432 23578
Q ss_pred EEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 228 LSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 228 l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
++|||+++. ++.....++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 999999642 23444569999999999999 899999999999999999999999999987531
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||+.
T Consensus 158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~ 210 (338)
T cd07859 158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 210 (338)
T ss_pred CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 8888888999888753
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-27 Score=209.79 Aligned_cols=145 Identities=23% Similarity=0.349 Sum_probs=122.8
Q ss_pred eEeccCCcEEEEEEEEc----CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 159 HLLGTESLGSVYKWIFL----DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+.||+|+||.||+++.. +++.||+|+++... ......+.+|++++++++||||+++++++.. ....+++|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~~lv~ 79 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKLYLIL 79 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeEEEEE
Confidence 57999999999999853 46789999997642 2233456789999999999999999998874 45678999
Q ss_pred cccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||+++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (323)
T cd05584 80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTV 156 (323)
T ss_pred eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCc
Confidence 999999775543 47899999999999 899999999999999999999999999987531
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~ 202 (323)
T cd05584 157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence 8899999999999754
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-27 Score=213.27 Aligned_cols=135 Identities=24% Similarity=0.335 Sum_probs=115.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..+|+..+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++|+||+++++++. ....++++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv 150 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFD--HNGEIQVL 150 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEec--cCCeEEEE
Confidence 345677789999999999999965 67899999996543 334567889999999999999999999986 44567889
Q ss_pred ecccCCCCHH--------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDFP--------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~~--------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||+++|++. ....++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++.
T Consensus 151 ~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 151 LEFMDGGSLEGTHIADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred EecCCCCcccccccCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccccccee
Confidence 9999998653 34579999999999999 89999999999999999999999999998753
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=222.21 Aligned_cols=141 Identities=22% Similarity=0.264 Sum_probs=120.5
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCC-cEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeee----cc-
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDE-TNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAI----LI- 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~----~~- 222 (312)
....+.++.+.|.+|||+.||.|....+ ..||+|++-...+...+.+.+|+++|++|+ |+|||.+++.... ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 3445678889999999999999997665 899999998777888899999999999998 9999999994321 12
Q ss_pred cccEEEEecccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 223 LKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
...+.+.||||.+|.+ .++++|+.|+++|+++||.. +++|||||||-|||||+.++..||||||.
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 3557788999998744 45568999999999999965 78899999999999999999999999998
Q ss_pred hhh
Q 036266 289 SKL 291 (312)
Q Consensus 289 a~~ 291 (312)
|.-
T Consensus 193 att 195 (738)
T KOG1989|consen 193 ATT 195 (738)
T ss_pred ccc
Confidence 865
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=206.62 Aligned_cols=151 Identities=20% Similarity=0.278 Sum_probs=128.7
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.+|+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....+++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR--RGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec--CCEEEEE
Confidence 36888999999999999999976 57789999997542 2334567889999999999999999998873 4567899
Q ss_pred ecccCCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||++++.+ .....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 999987743 344579999999999999 899999999999999999999999999988642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~ 203 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPG 203 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCC
Confidence 8899999999998864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=209.21 Aligned_cols=128 Identities=23% Similarity=0.246 Sum_probs=108.9
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
+.||+|+||.||++... +++.||+|+++... ......+..|+++++.++||||+++++++.. ...++++|||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEEEeCCC
Confidence 36899999999999864 67889999998643 2334566789999999999999999998873 456889999999
Q ss_pred CCCHHH------------HHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 235 NGDFPE------------RLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 235 ~g~~~~------------~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|++.. ...++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~ 145 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE 145 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCee
Confidence 986643 3468999999999999 6 7999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-27 Score=206.18 Aligned_cols=134 Identities=24% Similarity=0.383 Sum_probs=114.1
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-----------------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-----------------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 213 (312)
.++|...+.||+|+||.||+|.+.+ +..||+|.+.... ......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3568888999999999999997532 2369999987643 334567899999999999999999
Q ss_pred eeeeeeecccccEEEEecccCCCCHHH-------------------------------HHHHHHHHHHHHHHHhCCCCCC
Q 036266 214 ILTTIAILILKPWYLSSCVMPNGDFPE-------------------------------RLNIMIDMALAFEYLHHGRSTP 262 (312)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~g~~~~-------------------------------~~~i~~~i~~~l~ylH~~~~~~ 262 (312)
+++++.. ....+++|||+++|++.+ ..+++.|++.|++||| +.+
T Consensus 84 ~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ 158 (304)
T cd05096 84 LLGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLN 158 (304)
T ss_pred EEEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCC
Confidence 9999874 345788999999987644 3469999999999999 889
Q ss_pred ceecCCCCCCeeeCCCCceEEccccchh
Q 036266 263 MVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 263 iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|+||||||+||++++++.+||+|||+++
T Consensus 159 ivH~dlkp~Nill~~~~~~kl~DfG~~~ 186 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIKIADFGMSR 186 (304)
T ss_pred ccccCcchhheEEcCCccEEECCCccce
Confidence 9999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-27 Score=209.12 Aligned_cols=133 Identities=24% Similarity=0.301 Sum_probs=114.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+++.. +++.||+|++.+.. ....+.+.+|+.++..++|+||+++++++. ....+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ--DENNLYL 78 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe--cCCeEEE
Confidence 36888999999999999999965 57889999997532 223455788999999999999999999887 4456889
Q ss_pred EecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~ 150 (331)
T cd05597 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCL 150 (331)
T ss_pred EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCcee
Confidence 99999998765443 48899999999999 8999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=212.05 Aligned_cols=133 Identities=21% Similarity=0.334 Sum_probs=115.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|... +++.||+|+++... ......+.+|+.++.+++||+|+++++.+. +...+++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~~~~~l 78 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--DKRNLYL 78 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEEE
Confidence 36788899999999999999975 57889999997542 233456788999999999999999999887 4556889
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCc
Confidence 99999999776543 58999999999999 8999999999999999999999999999863
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-27 Score=208.63 Aligned_cols=133 Identities=24% Similarity=0.272 Sum_probs=114.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+|..++..++|++|+++++++. .....++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--~~~~~~l 78 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--DENYLYL 78 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--cCCEEEE
Confidence 46888999999999999999975 57789999997532 223445778999999999999999999887 4456889
Q ss_pred EecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.||+|+| +++|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~ 150 (331)
T cd05624 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCL 150 (331)
T ss_pred EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEecccee
Confidence 99999999775543 47899999999999 8999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.7e-27 Score=207.20 Aligned_cols=149 Identities=23% Similarity=0.284 Sum_probs=123.5
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHh---hcCCCCceeeeeeeeeecccccEE
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVH---KNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ ++++||||+++++++. .....+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~--~~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ--TEDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE--cCCEEE
Confidence 566789999999999999865 57889999998643 22334566666554 6778999999999987 445688
Q ss_pred EEecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 228 LSSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 228 l~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
++|||+++|++. +...++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 79 FVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 999999998654 34469999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 8899999999999753
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=208.00 Aligned_cols=133 Identities=23% Similarity=0.251 Sum_probs=112.2
Q ss_pred ccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILK 224 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 224 (312)
+|+..+.||+|+||.||+++.. +++.||+|++.... ....+.+..|+.++++++ ||+|+++++++. ...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~--~~~ 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ--TEA 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe--cCC
Confidence 4778899999999999998853 46789999997532 223456778999999995 999999998876 345
Q ss_pred cEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 225 PWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.++++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 79 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 79 KLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 67889999999976543 358899999999999 89999999999999999999999999998864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=207.08 Aligned_cols=151 Identities=21% Similarity=0.260 Sum_probs=130.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+++.. ++..||+|.+.... ......+.+|++++++++||||+++++++.. ....+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEEEEE
Confidence 467899999999999999999975 57889999997643 3445678999999999999999999999874 3467889
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||+++|++.+.+ .++.|++.|+.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 9999999776543 68999999999999 54 6999999999999999999999999988642
Q ss_pred ------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|++
T Consensus 159 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 159 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 899999999999985
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-27 Score=208.98 Aligned_cols=134 Identities=21% Similarity=0.277 Sum_probs=115.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++. +....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~--~~~~~~l 78 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ--DKDNLYL 78 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe--cCCeEEE
Confidence 36888999999999999999965 67889999998643 234456788999999999999999998887 3456889
Q ss_pred EecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 229 SSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 229 ~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~ 151 (330)
T cd05601 79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAAR 151 (330)
T ss_pred EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeE
Confidence 99999999776543 47899999999999 89999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=215.26 Aligned_cols=147 Identities=27% Similarity=0.351 Sum_probs=126.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+.....+-+|+|+-|.||.|+++ ++.||||+++... ..+|+-|++|+||||+.+.|+|. ....++++
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCt--qsPcyCIi 190 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCT--QSPCYCII 190 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeec--CCceeEEe
Confidence 34444555667899999999999984 4679999886432 34688899999999999999997 55678999
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||||..|.+.+.+ .|..+||.|+.||| .+.|||||||.-||||..+..+||+|||.++..
T Consensus 191 MEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST 267 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST 267 (904)
T ss_pred eeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhh
Confidence 9999999887765 59999999999999 899999999999999999999999999998874
Q ss_pred ------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+++|||+||..||.++
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc
Confidence 99999999999998754
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-27 Score=206.60 Aligned_cols=150 Identities=23% Similarity=0.276 Sum_probs=125.1
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCC-ceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHR-NLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~l 228 (312)
+|+..+.||+|+||.||+|... +++.||||++.... ....+.+..|.+++..++|+ +|+++++++.. ...+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--MDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--CCEEEE
Confidence 4778899999999999999975 46789999998643 23445678899999999765 57888888763 446889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999977543 358999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 156 KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 8899999999999853
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-27 Score=210.22 Aligned_cols=155 Identities=21% Similarity=0.292 Sum_probs=129.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999865 57889999996432 334566788999999999999999999885432 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
...+++|||++++ +......++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 3578999999875 23445568999999999999 899999999999999999999999999988642
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||.+
T Consensus 176 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 176 NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988853
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=202.24 Aligned_cols=147 Identities=24% Similarity=0.255 Sum_probs=126.0
Q ss_pred eEeccCCcEEEEEEEEcCCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeee--cccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAI--LILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~~~l~~~~~ 233 (312)
..+++|+++.||+|.+ +++.||||.++.... ...+.+.+|+.++++++||||+++++++.. .....++++|||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 6789999999999998 688999999976432 224678899999999999999999999875 3455788999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
++|++.+. ++++.|++.|++|+| + .+++||||||+||++++++.+|++|||+++..
T Consensus 105 ~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~ 181 (283)
T PHA02988 105 TRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV 181 (283)
T ss_pred CCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence 99866544 569999999999999 5 47899999999999999999999999998741
Q ss_pred ---------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|+++|+.||...
T Consensus 182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~ 225 (283)
T PHA02988 182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL 225 (283)
T ss_pred CcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC
Confidence 88999999999998653
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-27 Score=206.03 Aligned_cols=152 Identities=20% Similarity=0.262 Sum_probs=127.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|...+.+|+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++.. ....+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 82 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHT--DKSLTLV 82 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEee--CCeEEEE
Confidence 356888999999999999999975 57789999997543 2233457789999999999999999999874 4467888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||+++. ++.+...++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 8898753 23444568899999999999 899999999999999999999999999987542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||+.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 207 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPG 207 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999988753
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=206.70 Aligned_cols=144 Identities=21% Similarity=0.289 Sum_probs=123.0
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..+++++ +||||+++++++. ....++++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~--~~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ--TESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE--cCCEEEEEEeCC
Confidence 36899999999999975 57889999998643 23345678899999888 6999999999887 445688999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST 155 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccc
Confidence 99976543 358999999999999 899999999999999999999999999987631
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.||+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 889999999999985
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-27 Score=206.74 Aligned_cols=145 Identities=22% Similarity=0.272 Sum_probs=121.8
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|+++... ......+..|.+++..+ +||||+++++++.. ...++++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEEEEeCC
Confidence 36899999999999975 57889999998643 23345567788888765 79999999999874 45688999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTT 155 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccc
Confidence 99977543 458999999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence 8899999999999853
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-27 Score=207.03 Aligned_cols=144 Identities=29% Similarity=0.343 Sum_probs=121.2
Q ss_pred eEeccCCcEEEEEEEE----cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 159 HLLGTESLGSVYKWIF----LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
+.||+|+||.||+++. .+++.||+|+++... ......+..|++++++++||||+++++++.. ...++++|||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEEEEEEcC
Confidence 5789999999999875 257889999998643 2234456789999999999999999998874 4567899999
Q ss_pred cCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 233 MPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 233 ~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
+++|++.+. ..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~ 156 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 156 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCcee
Confidence 999876543 468999999999999 899999999999999999999999999987642
Q ss_pred ----------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 157 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 199 (318)
T cd05582 157 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQ 199 (318)
T ss_pred cccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCC
Confidence 777888888888874
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=206.87 Aligned_cols=144 Identities=22% Similarity=0.296 Sum_probs=122.0
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++.++ +||||+++++++.. ....+++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEEEEeCC
Confidence 36899999999999975 57889999998643 23345577888888776 79999999998874 45678999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 155 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccc
Confidence 99977543 358999999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 889999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=209.36 Aligned_cols=133 Identities=22% Similarity=0.350 Sum_probs=115.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+++++.++||||+++++++. +....++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--DEEHLYL 78 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee--cCCeEEE
Confidence 36888999999999999999975 68899999998643 234456888999999999999999998887 4556889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||++++++.+. ..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~ 149 (350)
T cd05573 79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCK 149 (350)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCc
Confidence 9999999876544 358999999999999 8999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.2e-27 Score=214.97 Aligned_cols=150 Identities=23% Similarity=0.253 Sum_probs=122.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec------ccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL------ILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------~~~ 224 (312)
..+|...+.||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++... ...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999975 57889999886432 2245799999999999999998876432 223
Q ss_pred cEEEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccc
Q 036266 225 PWYLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNI 288 (312)
Q Consensus 225 ~~~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~ 288 (312)
.++++|||++++ ++.....++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+
T Consensus 141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 577899999864 22334568899999999999 8999999999999999965 4799999999
Q ss_pred hhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.+ |++++||+||..||..
T Consensus 218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 273 (440)
T PTZ00036 218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSG 273 (440)
T ss_pred chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8753 8888888888888753
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=205.99 Aligned_cols=145 Identities=21% Similarity=0.263 Sum_probs=121.6
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||||+++... ......+..|.+++..+ +||||+++++++. ....++++|||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~--~~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQ--TPDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEE--cCCEEEEEEcCC
Confidence 36899999999999975 57889999998643 23345567788888776 6999999999887 445678999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST 155 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccc
Confidence 99977543 358999999999999 899999999999999999999999999986531
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 8889999999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=205.21 Aligned_cols=144 Identities=24% Similarity=0.295 Sum_probs=118.7
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHH-HhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCE-VHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++||||+++++++. .....+++|||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~--~~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ--TAEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE--cCCEEEEEEcCC
Confidence 36899999999999975 57889999997643 222334555554 678899999999998887 445678999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTST 155 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccc
Confidence 99976543 348899999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (321)
T cd05603 156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (321)
T ss_pred ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCC
Confidence 888899999988874
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=205.39 Aligned_cols=133 Identities=21% Similarity=0.286 Sum_probs=113.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+++.. +++.+|+|++.+.. ......+.+|+.++..++|++|+++++++. +...+++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--DENNLYL 78 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe--cCCEEEE
Confidence 36888999999999999999975 46789999997532 223345788999999999999999999887 4456889
Q ss_pred EecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||+++|++.+.+ .++.|++.|++||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchhe
Confidence 99999999765443 58899999999999 8999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=204.74 Aligned_cols=150 Identities=23% Similarity=0.283 Sum_probs=124.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
+|+..+.||+|+||.||+|+.. +++.||+|++.... ......+..|..++..+ +|++|+++++++.. ...+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--MDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--CCEEEE
Confidence 4778899999999999999975 56789999998643 22334566777887776 58999999888873 456889
Q ss_pred EecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.. ...++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++..
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 999999997654 3468999999999999 899999999999999999999999999988631
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 156 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=216.28 Aligned_cols=149 Identities=23% Similarity=0.252 Sum_probs=127.5
Q ss_pred ccccceEeccCCcEEEEEEEEc-C-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-D-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.|...+.+|+|++|.||+|... + ++.||+|.+..........+.+|+.+++.++|||||++++++.. ....+++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~--~~~~~lv~E 145 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS--DDKLLLIME 145 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--CCEEEEEEE
Confidence 4888999999999999999854 3 56789998765555555667889999999999999999999874 456889999
Q ss_pred ccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 232 VMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 232 ~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|+++|++.+. ..++.|++.||+|+| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999987542 248899999999999 899999999999999999999999999988642
Q ss_pred -----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 223 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~ 272 (478)
T PTZ00267 223 VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFK 272 (478)
T ss_pred cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCC
Confidence 888889999988875
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=211.21 Aligned_cols=145 Identities=19% Similarity=0.202 Sum_probs=121.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+|+..+.||+|+||.||+|... +++.||+|.... ..+.+|++++++++||||+++++++.. ....+++
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~lv 161 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTY--NKFTCLI 161 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEE--CCeeEEE
Confidence 3457999999999999999999975 578899997542 346789999999999999999999874 3456777
Q ss_pred ecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 230 SCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 230 ~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
+|++.+. ++.+.+.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 162 ~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~ 238 (391)
T PHA03212 162 LPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN 238 (391)
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence 7777532 34556679999999999999 889999999999999999999999999998531
Q ss_pred -------------------------------hhhhhhhhcCCCCC
Q 036266 293 -------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~ 306 (312)
|++++|++||+.|+
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 88899999988764
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-28 Score=223.47 Aligned_cols=153 Identities=31% Similarity=0.443 Sum_probs=132.0
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
...+....+.+|+|+||.||+|+.. +...||||.++...+. ...+|.+|+++++.++|||||+++|.|. ..
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~--~~ 561 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCR--EG 561 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc--cC
Confidence 3445566789999999999999843 2345999999876644 7789999999999999999999999998 55
Q ss_pred ccEEEEecccCCCCHHHH--------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 224 KPWYLSSCVMPNGDFPER--------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~--------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
..++|++|||..||+.+. +.||.|||.|++||- ++..|||||-.+|+|+.+
T Consensus 562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGE 638 (774)
T ss_pred CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceecc
Confidence 678999999999976554 469999999999999 888999999999999999
Q ss_pred CCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 278 DMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 278 ~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+..+||+|||++|.. |+++||+|+ |+.|+.+
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g 708 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG 708 (774)
T ss_pred ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc
Confidence 999999999999885 999999997 5667654
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=211.35 Aligned_cols=134 Identities=20% Similarity=0.279 Sum_probs=112.4
Q ss_pred ccccccceEeccCCcEEEEEEEE------cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIF------LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILIL 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 223 (312)
.++|+..+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.. .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~--~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV--G 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--C
Confidence 45688899999999999999973 134579999997533 33446688999999999 89999999999874 4
Q ss_pred ccEEEEecccCCCCHHHH--------------------------------------------------------------
Q 036266 224 KPWYLSSCVMPNGDFPER-------------------------------------------------------------- 241 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~-------------------------------------------------------------- 241 (312)
...+++|||+++|++.+.
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 457888999998866433
Q ss_pred -------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 242 -------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 242 -------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++++.|+++|++||| +++|+||||||+||++++++.+||+|||+++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 262 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLAR 262 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccce
Confidence 357889999999999 8999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=204.35 Aligned_cols=144 Identities=23% Similarity=0.291 Sum_probs=119.2
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhc-CCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKN-VRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++.. .+||||+++++++.. ....+++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36899999999999975 57789999998643 2233445567777664 479999999998873 45688999999
Q ss_pred CCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++...+ .++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~ 155 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAST 155 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccc
Confidence 999775543 58999999999999 899999999999999999999999999988631
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~ 197 (316)
T cd05592 156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence 888899999998875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=201.65 Aligned_cols=153 Identities=22% Similarity=0.305 Sum_probs=122.3
Q ss_pred cccccceEeccCCcEEEEEEEEc--CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC---CCCceeeeeeeeee---cc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL--DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAI---LI 222 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~---~~ 222 (312)
++|+..+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888899999999999999863 35779999987543 22233456677766655 69999999998753 23
Q ss_pred cccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 223 LKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 223 ~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
...++++|||+++. ++.+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccce
Confidence 45688999998742 34456679999999999999 899999999999999999999999999987
Q ss_pred hhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.. |++++|+++|+.|+..
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 158 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred EeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 642 8888899999888753
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=208.54 Aligned_cols=155 Identities=23% Similarity=0.308 Sum_probs=129.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.||+|+||.||+|... .++.||||.+.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999865 57889999997532 334466788999999999999999999875432 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
...+++|||++++ +......++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~ 171 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 171 (355)
T ss_pred ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence 3578999999865 23445579999999999999 899999999999999999999999999998652
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=204.61 Aligned_cols=152 Identities=21% Similarity=0.277 Sum_probs=130.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.+|+|+||.||++.+. ++..+|+|.+.... ......+.+|++++++++||||+++++++.. ....+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--CCEEEEE
Confidence 467899999999999999999976 57889999987643 3345668899999999999999999999874 4467889
Q ss_pred ecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||+++|++.+.+ .++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||+++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~ 159 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 159 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence 9999999876543 588999999999993 247999999999999999999999999988642
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 203 (333)
T cd06650 160 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP 203 (333)
T ss_pred ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 889999999999875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-27 Score=210.47 Aligned_cols=154 Identities=23% Similarity=0.344 Sum_probs=127.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
...++|+..+.||+|+||.||+|... ++..||+|+++... ......+.+|+++++++ +|||||++++++..
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~- 113 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH- 113 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-
Confidence 34557889999999999999998842 23469999997543 33445688999999999 89999999998874
Q ss_pred ccccEEEEecccCCCCHHH-------------------------------------------------------------
Q 036266 222 ILKPWYLSSCVMPNGDFPE------------------------------------------------------------- 240 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~------------------------------------------------------------- 240 (312)
....+++|||+++|++.+
T Consensus 114 -~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 114 -GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred -CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 456788999998886643
Q ss_pred ---------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 241 ---------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 241 ---------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
.++++.|++.||+||| +++|+||||||+||++++++.+||+|||+++..
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~ 269 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV 269 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee
Confidence 3468899999999999 899999999999999999999999999987531
Q ss_pred -------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.||+.
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 788888886 8888764
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=208.51 Aligned_cols=155 Identities=22% Similarity=0.296 Sum_probs=130.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|...+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++.... .
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4568999999999999999999965 57889999997532 334466788999999999999999998875322 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
...+++|||++++ +..+...++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 4578999999875 34455679999999999999 899999999999999999999999999998642
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 8899999999998853
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=204.21 Aligned_cols=145 Identities=25% Similarity=0.310 Sum_probs=118.9
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHH-HhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCE-VHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++||||+++++++.. ....+++|||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYFVLDYV 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEEEEcCC
Confidence 36899999999999975 68889999997643 222334455544 5688999999999998874 45678899999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (323)
T cd05575 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTST 155 (323)
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccc
Confidence 99977543 358999999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 198 (323)
T cd05575 156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (323)
T ss_pred ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC
Confidence 8888888888888743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=200.23 Aligned_cols=150 Identities=21% Similarity=0.277 Sum_probs=127.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++||||+++++.+.. ....+++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC--CCeEEEE
Confidence 3778899999999999999964 67889999997543 2223456789999999999999999998874 3468899
Q ss_pred ecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||+++|++.. ...++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++..
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999886643 3458999999999999 889999999999999999999999999987642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 8999999999999853
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=209.18 Aligned_cols=152 Identities=18% Similarity=0.290 Sum_probs=125.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---cccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~~~ 227 (312)
+|+..+.||+|+||.||++... +++.||||.+.... ....+.+.+|+++++.++||||+++++++.... ....+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999964 68899999986532 234467889999999999999999999886443 12578
Q ss_pred EEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 228 LSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 228 l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+++||+.++ +......++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 889998743 34445679999999999999 899999999999999999999999999987531
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 207 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQA 207 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCC
Confidence 7888888888888753
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=213.06 Aligned_cols=150 Identities=21% Similarity=0.303 Sum_probs=130.2
Q ss_pred ceEeccCCcEEEEEEEEc-CCcEEEEEEeehh----hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 158 WHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ----LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
...+|+|+|-+||+|.+. +|..||--.++.. .+...+.|..|+++|+.|+|||||++|.++.......+.+++|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 458999999999999975 4666764433322 24556889999999999999999999999998888889999999
Q ss_pred cCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccccchhhh-------
Q 036266 233 MPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 233 ~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~------- 292 (312)
+..|++.+++ .|++||++||.|||+. .++|||||||.+||+++ ..|.+||+|.|+|+..
T Consensus 125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 9999987764 5999999999999976 78999999999999998 5789999999999985
Q ss_pred --------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------g~~~~e~~tg~~p~~e 308 (312)
|.-+.||+|+.|||.|
T Consensus 204 vIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred eccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhh
Confidence 8889999999999976
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=203.73 Aligned_cols=145 Identities=27% Similarity=0.328 Sum_probs=118.0
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHH-HHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKC-EVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.. ....+++|||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYFVLDYI 78 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEEEEeCC
Confidence 36899999999999975 56789999997643 12223344444 45688999999999998874 45678899999
Q ss_pred CCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++.+.+ .++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~ 155 (325)
T cd05602 79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTST 155 (325)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccc
Confidence 999775543 48899999999999 899999999999999999999999999987642
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 8888888888888753
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=203.60 Aligned_cols=151 Identities=28% Similarity=0.409 Sum_probs=125.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|+..+.||+|+||.||+|.+. ++. .||+|.++... ....+++.+|+.+++.++||||+++++++... .
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~---~ 82 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 82 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---C
Confidence 346889999999999999999864 333 38999987543 34556788999999999999999999988642 3
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++++|+++|++.+ .++++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccc
Confidence 567788999886543 3568999999999999 899999999999999999999999999998742
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 788888887 8888754
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=215.11 Aligned_cols=157 Identities=25% Similarity=0.272 Sum_probs=131.4
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc--
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL-- 223 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-- 223 (312)
.....+|...+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++..++|+|++++.+.+...+.
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345578999999999999999999864 68899999997542 3445667889999999999999999877653221
Q ss_pred ----ccEEEEecccCCCCHHHHH----------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 224 ----KPWYLSSCVMPNGDFPERL----------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 224 ----~~~~l~~~~~~~g~~~~~~----------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
..++++|||+++|++.+.+ .++.|++.||+|+| +++|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEE
Confidence 2467899999999876543 48899999999999 899999999999999999999999
Q ss_pred ccccchhhh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 284 SDFNISKLL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 284 ~DFG~a~~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|||+++.+ |++++|+++|+.||..
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~ 247 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG 247 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 999987542 8889999999988753
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-26 Score=203.05 Aligned_cols=150 Identities=21% Similarity=0.262 Sum_probs=124.3
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l 228 (312)
+|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.+. |++|+++++++.. ...+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--VDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEec--CCEEEE
Confidence 3677889999999999999965 57889999998643 233455777888888876 5677788888763 446889
Q ss_pred EecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.. ...++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999986644 3469999999999999 899999999999999999999999999987641
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+..
T Consensus 156 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 156 VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 8889999999998754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=202.79 Aligned_cols=144 Identities=22% Similarity=0.269 Sum_probs=120.4
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhc-CCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKN-VRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|+++... .........|.+++.. .+||||+++++++.. ....+++|||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEEEECCC
Confidence 36899999999999975 57889999998643 2234456678777765 489999999999874 45788999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAST 155 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceec
Confidence 99876543 358899999999999 899999999999999999999999999987531
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 888999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=199.23 Aligned_cols=142 Identities=23% Similarity=0.290 Sum_probs=120.6
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
||+|+||.||++... +++.||+|.+.... ....+.+..|++++++++||||+++.+++.. ....+++|||+++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEeCCCCC
Confidence 689999999999865 67889999997543 2233567789999999999999999988763 45678999999998
Q ss_pred CHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 237 DFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 237 ~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
++.. ...++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK 155 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence 7643 2358999999999999 899999999999999999999999999988531
Q ss_pred ----------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 198 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFR 198 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 889999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=203.73 Aligned_cols=144 Identities=26% Similarity=0.321 Sum_probs=118.0
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHH-HhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCE-VHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++||||+++++++.. ....+++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEEEEcCC
Confidence 36899999999999965 68899999997643 223344555554 5678999999999988874 45678889999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 155 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTT 155 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccc
Confidence 99876443 458999999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||++|..||.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (325)
T cd05604 156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCC
Confidence 778888888888864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-26 Score=221.35 Aligned_cols=133 Identities=21% Similarity=0.289 Sum_probs=115.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~~~lyL 79 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--GDPVYY 79 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--CCEEEE
Confidence 57889999999999999999975 57889999997532 3345678899999999999999999998874 456788
Q ss_pred EecccCCCCHHH-----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 229 SSCVMPNGDFPE-----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 229 ~~~~~~~g~~~~-----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
+|||+++|++.+ .++++.|+++||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEe
Confidence 899999987644 2458899999999999 88999999999999999999999999
Q ss_pred ccchh
Q 036266 286 FNISK 290 (312)
Q Consensus 286 FG~a~ 290 (312)
||+|+
T Consensus 157 FGLAk 161 (932)
T PRK13184 157 WGAAI 161 (932)
T ss_pred cCcce
Confidence 99874
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=203.13 Aligned_cols=144 Identities=21% Similarity=0.291 Sum_probs=122.9
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++.. ...++++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEEEEeCC
Confidence 36899999999999975 57889999998643 23445678899998888 59999999998873 45688999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST 155 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceec
Confidence 99977543 459999999999999 899999999999999999999999999987641
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 899999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-27 Score=214.40 Aligned_cols=146 Identities=27% Similarity=0.425 Sum_probs=129.0
Q ss_pred eEeccCCcEEEEEEEEcCC-cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC
Q 036266 159 HLLGTESLGSVYKWIFLDE-TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD 237 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~ 237 (312)
-.+|+|+||+||.|++.+. ..+|||.+.....+..+.+..|+.+.++++|.|||+++|.+.. ..++-+.||-+|+|+
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se--nGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE--NGFFKIFMEQVPGGS 658 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC--CCeEEEEeecCCCCc
Confidence 3789999999999997654 4599999988777777888999999999999999999999764 346677788999998
Q ss_pred HHHHHH---------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccccchhhh---------
Q 036266 238 FPERLN---------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 238 ~~~~~~---------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~--------- 292 (312)
+...++ +.+||++||.||| +..|||||||-.|||++ -.|.+||+|||.++.+
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET 735 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET 735 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence 877663 8899999999999 89999999999999997 5899999999999886
Q ss_pred -----------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+...||.||++||-|+
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El 781 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL 781 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence 88889999999999875
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=207.21 Aligned_cols=137 Identities=23% Similarity=0.338 Sum_probs=120.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.++|...+.+|+|+||.++.++++ +++.+++|.+.... +...+....|+.++++++|||||.+.+.|.. +...+++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~-~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEE-DGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhc-CCceEEE
Confidence 467889999999999999999865 57789999998654 3444577899999999999999999999874 3345899
Q ss_pred EecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|+|++||++.+.+ +|+.|++.|+.||| +..|+|||||+.||+++.++.+||+|||+|+.+
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l 156 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL 156 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence 99999999887654 59999999999999 899999999999999999999999999999996
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=208.18 Aligned_cols=136 Identities=24% Similarity=0.373 Sum_probs=121.0
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.....+.||+|.||.|..|....+..||||.++... ....++|.+|+++|.+++|||||.++|+|.. ...+++++
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~--DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ--DDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec--CCchHHHH
Confidence 34456678999999999999998777899999998766 3445889999999999999999999999984 45688999
Q ss_pred cccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 231 CVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 231 ~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|||++||+.+.+ +|+.||+.|++||. +.++||||+.+.|+|+|.++++||+|||+++.+
T Consensus 615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~l 687 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNL 687 (807)
T ss_pred HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCccccccc
Confidence 999999887654 69999999999999 899999999999999999999999999999953
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.6e-26 Score=200.94 Aligned_cols=144 Identities=24% Similarity=0.293 Sum_probs=120.1
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhc-CCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKN-VRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|... +++.||||+++... ......+..|..++.. ++||||+++++++.. ...++++|||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEEEEeCC
Confidence 36899999999999975 47789999998653 2233456677777775 589999999999874 44678899999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCT 155 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceee
Confidence 99876543 458999999999999 899999999999999999999999999987531
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 889999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-26 Score=196.63 Aligned_cols=143 Identities=20% Similarity=0.240 Sum_probs=120.7
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
||+|+||.||+++.. +++.||+|.+.... ......+..|++++++++||||+++++++. .....+++|||++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~--~~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE--SKTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe--cCCeEEEEEecCCCC
Confidence 689999999999865 58899999997532 122344567999999999999999999887 345688999999998
Q ss_pred CHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 237 DFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 237 ~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
++.. .+.++.|++.|++||| +.+|+||||||+||++++++.+||+|||++...
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA 155 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence 7643 3458899999999999 899999999999999999999999999987542
Q ss_pred -------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999853
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=202.19 Aligned_cols=129 Identities=20% Similarity=0.223 Sum_probs=106.3
Q ss_pred ceEeccCCcEEEEEEEEc---CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 158 WHLLGTESLGSVYKWIFL---DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.+.+|+|+||.||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++........++++||++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 358999999999999864 35679999987532 2245678999999999999999999887656667888898876
Q ss_pred CC--------------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee----CCCCceEEccccchh
Q 036266 235 NG--------------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISK 290 (312)
Q Consensus 235 ~g--------------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill----~~~~~~kl~DFG~a~ 290 (312)
+. +......++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+|+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 43 22334579999999999999 8899999999999999 456789999999885
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 161 ~ 161 (317)
T cd07868 161 L 161 (317)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-26 Score=207.12 Aligned_cols=136 Identities=22% Similarity=0.332 Sum_probs=113.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 222 (312)
..++|.+.+.||+|+||.||+|.... +..||||+++... ....+.+.+|+++++++. ||||+++++++. .
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--K 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc--c
Confidence 35678889999999999999998531 2369999997543 334467899999999996 999999999987 4
Q ss_pred cccEEEEecccCCCCHHHH-------------------------------------------------------------
Q 036266 223 LKPWYLSSCVMPNGDFPER------------------------------------------------------------- 241 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~------------------------------------------------------------- 241 (312)
....+++|||+++|++.+.
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 4567889999998876432
Q ss_pred -----------------------------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCee
Q 036266 242 -----------------------------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNL 274 (312)
Q Consensus 242 -----------------------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nil 274 (312)
++++.|+++|++||| ..+|+||||||+||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nil 269 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEE
Confidence 358899999999999 889999999999999
Q ss_pred eCCCCceEEccccchhh
Q 036266 275 LDEDMVAHVSDFNISKL 291 (312)
Q Consensus 275 l~~~~~~kl~DFG~a~~ 291 (312)
+++++.+||+|||+++.
T Consensus 270 l~~~~~~kL~DfGla~~ 286 (400)
T cd05105 270 LAQGKIVKICDFGLARD 286 (400)
T ss_pred EeCCCEEEEEeCCccee
Confidence 99999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-26 Score=197.48 Aligned_cols=137 Identities=26% Similarity=0.314 Sum_probs=118.7
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..+.|+..+.+|.|..|+||.|+.+. +..+|+|++++.. .....+...|-+||+.++||.++++|..|+ ...+.
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe--t~~~~ 152 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE--TDKYS 152 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee--cccee
Confidence 44567888999999999999999764 5779999998764 334556778999999999999999999998 45678
Q ss_pred EEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+++||||++|++...+ -++.+|+-||+||| -.|||.|||||+|||+.++|++.|+||-++...
T Consensus 153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 8899999999886544 38999999999999 999999999999999999999999999987654
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-26 Score=204.26 Aligned_cols=137 Identities=24% Similarity=0.350 Sum_probs=118.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCC-CCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 225 (312)
....|+..+.+|.|.||.||+|+.+ +|+.+|+|.+.+... .....+.+|+++|+++. |||||.++++|... ..
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~--~~ 110 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP--DS 110 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--Ce
Confidence 4456888899999999999999976 489999999987653 24467899999999999 99999999999854 47
Q ss_pred EEEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC----CCceEEccccchh
Q 036266 226 WYLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE----DMVAHVSDFNISK 290 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~----~~~~kl~DFG~a~ 290 (312)
++++||++.+|++.+++ .++.|++.|+.||| +.+|+|||+||+|+|+.. ++.+|++|||+|.
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 88889999999876654 48999999999999 899999999999999963 3579999999998
Q ss_pred hh
Q 036266 291 LL 292 (312)
Q Consensus 291 ~~ 292 (312)
..
T Consensus 188 ~~ 189 (382)
T KOG0032|consen 188 FI 189 (382)
T ss_pred Ec
Confidence 86
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-26 Score=195.86 Aligned_cols=150 Identities=23% Similarity=0.307 Sum_probs=128.6
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.+|+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++... ...++++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEEEEEEe
Confidence 5778889999999999999864 67889999987542 33446788999999999999999999998753 45678888
Q ss_pred ccCCCCHH--------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----------
Q 036266 232 VMPNGDFP--------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----------- 292 (312)
Q Consensus 232 ~~~~g~~~--------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----------- 292 (312)
|++++++. ....++.|++.|++||| +.+|+|+||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 156 (279)
T cd06619 80 FMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGT 156 (279)
T ss_pred cCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCC
Confidence 99998653 44579999999999999 899999999999999999999999999988642
Q ss_pred -----------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 157 ~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 157 NAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred hhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 8899999999999854
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=195.40 Aligned_cols=134 Identities=20% Similarity=0.317 Sum_probs=113.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..+|+..+.||+|+||.||+|.+. .+..||+|.++... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 81 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR--GNTM 81 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec--CCCc
Confidence 456888899999999999999853 24579999998643 2334578899999999999999999998873 4567
Q ss_pred EEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|||+++|++. +.+.++.|++.|++||| +.+++||||||+||+++.++.+|++|||.+.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~ 155 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQ 155 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccc
Confidence 8999999988554 44579999999999999 8999999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-26 Score=208.36 Aligned_cols=149 Identities=25% Similarity=0.339 Sum_probs=126.7
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-C-----CceeeeeeeeeecccccE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-H-----RNLIKILTTIAILILKPW 226 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 226 (312)
+|.+.+.||+|+||.|.+|.+. +++.||||+++... ...++...|+.+|..++ | -|+|+++++|. ...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~--fr~Hl 263 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY--FRNHL 263 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc--cccce
Confidence 7899999999999999999964 68899999998764 44566678999999987 4 49999999998 45567
Q ss_pred EEEecccCC-------------CCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC--CCceEEccccchhh
Q 036266 227 YLSSCVMPN-------------GDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE--DMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~-------------g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~ 291 (312)
|++.|.+.. -++.....++.||+.||.+|| +.+|||+||||||||+.+ ...+||+|||.|..
T Consensus 264 ciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 264 CIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 777775542 267777889999999999999 999999999999999974 34799999999988
Q ss_pred h---------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
. |+++.||++|++-||+
T Consensus 341 ~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 341 ESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 4 9999999999887775
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-26 Score=200.27 Aligned_cols=145 Identities=22% Similarity=0.291 Sum_probs=121.8
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|... +++.||||+++... ......+.+|.++++.+ +||||+++++++.. ...++++|||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEEEEcCC
Confidence 36899999999999975 47789999998653 23345567888888877 69999999998874 45688999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++... ..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 155 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST 155 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccc
Confidence 99876443 458999999999999 899999999999999999999999999987531
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~ 198 (318)
T cd05570 156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEG 198 (318)
T ss_pred eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCC
Confidence 8889999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=195.91 Aligned_cols=150 Identities=24% Similarity=0.339 Sum_probs=126.9
Q ss_pred cccceEeccCCcEEEEEEEE-----cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 155 FNEWHLLGTESLGSVYKWIF-----LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
|+..+.+|+|+||.||.+.. .+++.||+|.++... ......+.+|++++++++||||+++++++........++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37788999999999988653 246789999997643 234567889999999999999999999887655667889
Q ss_pred EecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 229 SSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 229 ~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+|||++++++. +++.++.|+++|++||| +.+|+||||||+||++++++.+|++|||+++.+
T Consensus 86 v~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 86 IMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred EecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 99999988654 44579999999999999 889999999999999999999999999987531
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||..|+.
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 211 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCC
Confidence 889999999988864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.8e-26 Score=193.89 Aligned_cols=133 Identities=26% Similarity=0.372 Sum_probs=114.1
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
++|+..+.+|+|+||.||++.+.++..+|+|.+.... .....+.+|++++++++||||+++++++.. ....+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~iv~e~ 80 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQ--QKPLYIVTEF 80 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEcc--CCCEEEEEEc
Confidence 4678889999999999999998777789999986432 234568889999999999999999998863 4567889999
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++|++. ..+.++.|++.|++||| +.+|+||||||+||++++++.+|++|||.++.
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccc
Confidence 9987544 34568999999999999 89999999999999999999999999997763
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=195.80 Aligned_cols=137 Identities=23% Similarity=0.325 Sum_probs=118.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..+|+..+.+|+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...+...+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 346788899999999999999742 467899999976655566788999999999999999999998765556678
Q ss_pred EEEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++||+++|++.+. ..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 899999998866543 468999999999999 89999999999999999999999999998774
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-26 Score=206.20 Aligned_cols=139 Identities=25% Similarity=0.382 Sum_probs=121.8
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
......|.....||+|.|+.|..|++. ++..||||.+++.. ....+.+.+|+++|+.++|||||+++.+.. ....
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~--t~~~ 129 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE--TEAT 129 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee--ecce
Confidence 345567888999999999999999965 68899999998754 334455889999999999999999999887 4566
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|++|||+.+|++.+.+ .++.|+..|++||| ++.|||||||++|||++.+.++||+|||++..+
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceee
Confidence 89999999999776554 58999999999999 999999999999999999999999999999887
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-28 Score=199.86 Aligned_cols=150 Identities=21% Similarity=0.332 Sum_probs=133.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+-|.+...+|+|+||.||+|.++ .|+.+|||.+.. +.+.+++..|+.++++++.|.+|++||.+. ....+|++||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYF--K~sDLWIVME 108 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYF--KHSDLWIVME 108 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhc--cCCceEeehh
Confidence 34677889999999999999975 689999999876 456788999999999999999999999765 4566899999
Q ss_pred ccCCCCHHHHHH-------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 232 VMPNGDFPERLN-------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 232 ~~~~g~~~~~~~-------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||..|+..+.++ +.+..++||+||| ...-||||||..|||++.+|.+|++|||.|-.+
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK 185 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK 185 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence 999998877653 8899999999999 888999999999999999999999999998775
Q ss_pred ------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+.+.||..|++||.++
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI 232 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc
Confidence 88999999999998764
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-26 Score=196.27 Aligned_cols=134 Identities=26% Similarity=0.385 Sum_probs=113.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ--EQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec--CCce
Confidence 46778899999999999999842 35679999997533 3444678899999999999999999998763 4567
Q ss_pred EEEecccCCCCHHHH-----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 227 YLSSCVMPNGDFPER-----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~-----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
+++|||++++++.+. +.++.|++.|++||| +++|+||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcC
Confidence 888999998876554 348999999999999 889999999999999999
Q ss_pred CCceEEccccchhh
Q 036266 278 DMVAHVSDFNISKL 291 (312)
Q Consensus 278 ~~~~kl~DFG~a~~ 291 (312)
++.+|++|||+++.
T Consensus 160 ~~~~kl~dfg~~~~ 173 (283)
T cd05090 160 QLHVKISDLGLSRE 173 (283)
T ss_pred CCcEEecccccccc
Confidence 99999999998853
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.7e-26 Score=194.08 Aligned_cols=152 Identities=22% Similarity=0.445 Sum_probs=129.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.+|+|++|.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++.+. .....++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 80 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT--KEEPIYIIT 80 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc--CCCCcEEEE
Confidence 346788899999999999999998778889999987543 23467889999999999999999998876 345578888
Q ss_pred cccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+ ++.++.|++.|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 9999886543 3468899999999999 889999999999999999999999999998642
Q ss_pred ---------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+++
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 888899998 8888764
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-26 Score=198.08 Aligned_cols=152 Identities=21% Similarity=0.281 Sum_probs=126.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|...+.||+|+||.||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++.. ....+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~--~~~~~lv 82 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHT--EKSLTLV 82 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEec--CCeEEEE
Confidence 356888999999999999999875 57889999987543 2233457789999999999999999999874 4467888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+||+++. ++.....++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 8898742 23445568999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.|++.
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999988753
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=202.68 Aligned_cols=155 Identities=22% Similarity=0.347 Sum_probs=126.7
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---- 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 222 (312)
...++|+..+.||+|+||.||+|... +++.||||.+.... ....+.+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 45678999999999999999999864 57889999987532 233456778999999999999999998875321
Q ss_pred cccEEEEecccCCCCH-----------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 223 LKPWYLSSCVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
....+++++++ ++++ .+...++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCcccee
Confidence 23467777776 3433 444579999999999999 89999999999999999999999999998765
Q ss_pred h----------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
. |++++|+++|+.|+++
T Consensus 168 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 218 (343)
T cd07878 168 ADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG 218 (343)
T ss_pred cCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 2 8888889998888753
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.2e-27 Score=191.11 Aligned_cols=138 Identities=25% Similarity=0.365 Sum_probs=116.2
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCC-CCceeeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVR-HRNLIKILTTIA 219 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~ 219 (312)
.....|...+.+|.|..+.|-+|..+ +|+.+|+|++.... ....++-.+|+.+|+++. ||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 34556788889999999999988865 67889999996432 223445677999999985 999999999998
Q ss_pred ecccccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcccc
Q 036266 220 ILILKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
. ..++++++|.|+.|.+.+.+ +|++|+..|++|+| .++|||||+||+|||+|++.++||+|||
T Consensus 94 s--~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 94 S--DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred C--cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccc
Confidence 4 45567777799999776554 69999999999999 9999999999999999999999999999
Q ss_pred chhhh
Q 036266 288 ISKLL 292 (312)
Q Consensus 288 ~a~~~ 292 (312)
+|+.+
T Consensus 169 Fa~~l 173 (411)
T KOG0599|consen 169 FACQL 173 (411)
T ss_pred eeecc
Confidence 99886
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-25 Score=195.26 Aligned_cols=149 Identities=21% Similarity=0.275 Sum_probs=125.6
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++.+.+.. ....+++|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYET--KDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CCEEEEEE
Confidence 566789999999999999864 68889999997543 2233457789999999999999999888774 45678888
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++. ....++.|++.|+.||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 899988653 34568999999999999 899999999999999999999999999987431
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||..
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=199.07 Aligned_cols=129 Identities=21% Similarity=0.224 Sum_probs=106.9
Q ss_pred ceEeccCCcEEEEEEEEcC---CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 158 WHLLGTESLGSVYKWIFLD---ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
...+|+|+||.||+|+..+ ++.||+|.+.... ....+.+|++++++++||||+++++++........++++||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3589999999999999653 4679999987532 2245778999999999999999999987666667889999987
Q ss_pred CC--------------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee----CCCCceEEccccchh
Q 036266 235 NG--------------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISK 290 (312)
Q Consensus 235 ~g--------------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill----~~~~~~kl~DFG~a~ 290 (312)
++ ++.....++.|++.||+||| +.+|+||||||+||++ ++++.+||+|||+|+
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 84 HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 53 22334579999999999999 8899999999999999 566799999999986
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 161 ~ 161 (317)
T cd07867 161 L 161 (317)
T ss_pred c
Confidence 4
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=201.37 Aligned_cols=126 Identities=23% Similarity=0.283 Sum_probs=103.6
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC---CCCceeeeeeeeeecccccEEEEeccc
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
||+|+||.||+|+.. +++.||||++.... ......+..|..++.+. +||||+++++++.. ....+++|||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEEEEcCC
Confidence 689999999999965 57889999997543 12233445566666655 69999999998874 45678999999
Q ss_pred CCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 234 PNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 234 ~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|++... ..++.|+++|++||| +++|+||||||+|||++.++.+||+|||+++.
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~ 145 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKA 145 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence 99876443 458999999999999 89999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=194.49 Aligned_cols=149 Identities=21% Similarity=0.294 Sum_probs=126.4
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++|++++++++.+.. ....+++|
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--KDALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CCEEEEEE
Confidence 667789999999999999965 67899999987543 2223456789999999999999999998874 45688999
Q ss_pred cccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+. ..++.|++.|+.||| +++|+||||||+||++++++.++++|||++...
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 99999877543 358899999999999 899999999999999999999999999987531
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=192.97 Aligned_cols=134 Identities=19% Similarity=0.319 Sum_probs=115.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+|+..+.+|+|+||.||+|+.. +++.||+|++..........+.+|+.++++++||||+++++++.. ....++++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~--~~~~~iv~ 85 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS--REKLWICM 85 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe--CCEEEEEE
Confidence 457899999999999999999964 678899999976544445567889999999999999999998874 44678899
Q ss_pred cccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.+. ..++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccce
Confidence 99999876543 458999999999999 8899999999999999999999999999775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=191.91 Aligned_cols=132 Identities=26% Similarity=0.390 Sum_probs=113.1
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+|...+.+|+|++|.||.|...++..+|+|.+.... .....+.+|+.++++++||||+++++++.. ....+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~ 80 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK--QRPIYIVTEY 80 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc--CCCcEEEEEc
Confidence 4577888999999999999987766679999987542 234568899999999999999999999864 3457888889
Q ss_pred cCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 233 MPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 233 ~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|++ .++++++.|++.|++||| +.+++||||||+||++++++.+|++|||.++
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccce
Confidence 987744 345679999999999999 8999999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=191.39 Aligned_cols=153 Identities=24% Similarity=0.335 Sum_probs=129.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.+|+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.......+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999965 57889999886421 2334678889999999999999999998875555667
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||++++++.+. .+++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 889999999866543 468999999999999 889999999999999999999999999977521
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 8888999999988753
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-26 Score=217.32 Aligned_cols=152 Identities=28% Similarity=0.413 Sum_probs=129.8
Q ss_pred ccccccceEeccCCcEEEEEEEEcC--Cc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD--ET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
....+..+.||+|.||.||.|...+ +. .||||.++... .+...+|.+|..+|++++|||||+++|++.. ..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~--~~ 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD--SG 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC--CC
Confidence 3445667899999999999999653 33 39999998654 5667889999999999999999999999885 45
Q ss_pred cEEEEecccCCCCHHHHH-------------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 225 PWYLSSCVMPNGDFPERL-------------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~-------------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
..++++|||.+||+...+ .++.|||+|+.||+ +++.|||||-.+|+|++....+||+|
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaD 845 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIAD 845 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcc
Confidence 567778899999876544 59999999999999 99999999999999999999999999
Q ss_pred ccchhhh--------------------------------------hhhhhhhhcC-CCCCcc
Q 036266 286 FNISKLL--------------------------------------GVLLPETFTR-KKPTIE 308 (312)
Q Consensus 286 FG~a~~~--------------------------------------g~~~~e~~tg-~~p~~e 308 (312)
||+|+.+ |+++||++|. ..||++
T Consensus 846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~ 907 (1025)
T KOG1095|consen 846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPS 907 (1025)
T ss_pred cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCC
Confidence 9999953 9999999985 556765
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=193.51 Aligned_cols=137 Identities=26% Similarity=0.476 Sum_probs=119.3
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
....+|+..+.+|+|++|.||+|...+++.+|+|.+..........+.+|+.+++.++||||+++++++.. ....+++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv 80 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSV--GEPVYII 80 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEec--CCCeEEE
Confidence 34567888999999999999999988888899999987655556778899999999999999999998874 4567888
Q ss_pred ecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||++++++.+ ..+++.|++.|++||| +.+|+||||||+||++++++.+|++|||.+..
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhh
Confidence 99999876544 4569999999999999 88999999999999999999999999998854
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=201.60 Aligned_cols=152 Identities=22% Similarity=0.286 Sum_probs=131.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.-|...+.+|+|-|+.|-.|++- +|.+||||++++.. .-....+.+|++.|+-++|||||++|++.. ....+|++
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViD--TQTKlyLi 95 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVID--TQTKLYLI 95 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhc--ccceEEEE
Confidence 34777889999999999988854 79999999998754 334556788999999999999999999876 55678888
Q ss_pred ecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~--- 292 (312)
.|.-++||+.+.+ +++.||+.|+.||| +..+|||||||+||.+- .-|-+|+.|||++-.+
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 8899999887765 69999999999999 88899999999999875 6789999999998765
Q ss_pred ---------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++-+++|+.||.|.
T Consensus 173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence 89999999999999874
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=195.13 Aligned_cols=151 Identities=21% Similarity=0.254 Sum_probs=127.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|+..+.+|+|+||.||++... ++..+|+|.+.... .....++.+|++++++++||||+++++++.. ....++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--DGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCEEEEEe
Confidence 36888999999999999999965 57789999987543 3344568899999999999999999999874 45678899
Q ss_pred cccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||++++++.+. ..++.|+++|++|||+ ..+++||||||+||++++++.+|++|||++...
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 156 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 156 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence 99999877554 3689999999999993 258999999999999999999999999987542
Q ss_pred ----------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 157 ~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 157 SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 889999999998875
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-25 Score=192.00 Aligned_cols=150 Identities=27% Similarity=0.370 Sum_probs=122.4
Q ss_pred ccceEeccCCcEEEEEEEEcC-Cc--EEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----ccccE
Q 036266 156 NEWHLLGTESLGSVYKWIFLD-ET--NVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKPW 226 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~ 226 (312)
...+.||+|+||.||+|.+.+ +. .||+|.++... ....+.+.+|++++++++||||+++++++... .....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999754 33 58999887542 34456788999999999999999999876422 22346
Q ss_pred EEEecccCCCCHH------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 227 YLSSCVMPNGDFP------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 227 ~l~~~~~~~g~~~------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
++++||+++|++. ..+.++.|++.|++||| +++|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 7888899888653 33468999999999999 89999999999999999999999999999
Q ss_pred hhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 289 SKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 289 a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
++.+ |++++|+++ |+.|++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 217 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPG 217 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 7642 888999998 7888764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-27 Score=193.19 Aligned_cols=137 Identities=23% Similarity=0.411 Sum_probs=116.0
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..+.|+..+.||+|.|+.||++.. .+|+.+|+|+++... ..+.+.+.+|+++-+.++|||||++.+.+. ...+.|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~--~~~~~y 86 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--EESFHY 86 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc--ccceeE
Confidence 345678888999999999999985 468889999987543 446788999999999999999999999876 455678
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~a~~~ 292 (312)
+++|+|.++++..-+ .+++||+.||.||| .++|||||+||+|+++. ..-.+|++|||+|..+
T Consensus 87 lvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 888899999875432 48899999999999 99999999999999995 3346899999999875
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-25 Score=191.41 Aligned_cols=134 Identities=22% Similarity=0.444 Sum_probs=114.8
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.++|+..+.+|+|++|.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++.. ....+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 81 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTL--EEPIYIVTE 81 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEec--CCCeeeeee
Confidence 45688899999999999999998777789999987543 234668899999999999999999998763 445788888
Q ss_pred ccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 232 VMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 232 ~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|++++++. +..+++.|++.|+.||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEE
Confidence 99877543 44579999999999999 88999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=200.47 Aligned_cols=154 Identities=22% Similarity=0.338 Sum_probs=126.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+..|+.+++++ +|+||+++++++...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~- 83 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP- 83 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-
Confidence 3457899999999999999999742 24679999987533 23345678899999999 799999999987643
Q ss_pred cccEEEEecccCCCCHHH--------------------------------------------------------------
Q 036266 223 LKPWYLSSCVMPNGDFPE-------------------------------------------------------------- 240 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~-------------------------------------------------------------- 240 (312)
...+++++||++++++..
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 346778889998876543
Q ss_pred -----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----------------
Q 036266 241 -----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----------------- 292 (312)
Q Consensus 241 -----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----------------- 292 (312)
+.+++.||+.|++||| +.+|+||||||+||++++++.+||+|||+++.+
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 3467899999999999 899999999999999999999999999988642
Q ss_pred ---------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |..|+++
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 888888887 8888754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=194.02 Aligned_cols=151 Identities=21% Similarity=0.365 Sum_probs=130.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+|+..+.+|+|++|.||+|... +++.||+|.+..........+.+|+.+++.++||||+++++.+.. ....++++
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~~~~~lv~ 96 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVM 96 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe--CCEEEEee
Confidence 457888899999999999999864 678899999986554455678899999999999999999998874 44678999
Q ss_pred cccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
||++++++.+ ...++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred cccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 9999986654 4468999999999999 889999999999999999999999999986531
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~ 217 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL 217 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 889999999999974
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-26 Score=200.12 Aligned_cols=156 Identities=24% Similarity=0.367 Sum_probs=122.2
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhh--cCCCCceeeeeeeeeecc--cccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHK--NVRHRNLIKILTTIAILI--LKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~--~l~h~niv~~~~~~~~~~--~~~~~ 227 (312)
....+..+.+|+|+||.||||.+. ++.||||++... ..+.|..|-++.+ .++|+||++++++-.... ...++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 344566778999999999999984 488999999854 4456777766654 468999999998754322 56789
Q ss_pred EEecccCCCC-----------HHHHHHHHHHHHHHHHHHhCC------CCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 228 LSSCVMPNGD-----------FPERLNIMIDMALAFEYLHHG------RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~-----------~~~~~~i~~~i~~~l~ylH~~------~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++++|.+.|+ |.+..+++.-+++||+|||++ .+++|+|||||+.|||+..|+++.|+|||+|.
T Consensus 285 LVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl 364 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLAL 364 (534)
T ss_pred EEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeE
Confidence 9999999995 555568999999999999963 46789999999999999999999999999998
Q ss_pred hh------hhhhhhhhcCCCCCccccc
Q 036266 291 LL------GVLLPETFTRKKPTIEMII 311 (312)
Q Consensus 291 ~~------g~~~~e~~tg~~p~~e~~~ 311 (312)
.+ |-.+-|+-|.+|.+||++.
T Consensus 365 ~~~p~~~~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 365 RLEPGKPQGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred EecCCCCCcchhhhhhhhhhcCHHHHh
Confidence 87 3333355555555555543
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-25 Score=216.18 Aligned_cols=160 Identities=21% Similarity=0.335 Sum_probs=130.5
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
......+|.+.+.||+|+||.||+|... ++..||+|.+.... ......+..|+.++++++|||||+++++|......
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3445678999999999999999999975 46679999987532 33456788999999999999999999998766666
Q ss_pred cEEEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCC----CCCceecCCCCCCeeeCC-------
Q 036266 225 PWYLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGR----STPMVHCDLKPSNNLLDE------- 277 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~----~~~iiHrDlkp~Nill~~------- 277 (312)
.++++|||+++|++... +.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 78999999999876543 358999999999999421 146999999999999964
Q ss_pred ----------CCceEEccccchhhh-------------------------------------hhhhhhhhcCCCCCc
Q 036266 278 ----------DMVAHVSDFNISKLL-------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 278 ----------~~~~kl~DFG~a~~~-------------------------------------g~~~~e~~tg~~p~~ 307 (312)
.+.+||+|||+++.+ |++++|++||+.||.
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred ccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 235899999987642 888899999998875
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=192.28 Aligned_cols=135 Identities=27% Similarity=0.403 Sum_probs=113.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|+..+.+|+|+||.||+|.+. .++.||+|.+.... .....++.+|+.+++.++||||+++++++. ..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--QG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc--CC
Confidence 4567899999999999999998753 24569999986432 234456889999999999999999999886 44
Q ss_pred ccEEEEecccCCCCHHH----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCce
Q 036266 224 KPWYLSSCVMPNGDFPE----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~ 281 (312)
...+++|||+++|++.+ .+.++.|+++|++||| +.+++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCE
Confidence 56788899999886543 3458899999999999 8899999999999999999999
Q ss_pred EEccccchh
Q 036266 282 HVSDFNISK 290 (312)
Q Consensus 282 kl~DFG~a~ 290 (312)
|++|||+++
T Consensus 159 ~l~dfg~~~ 167 (277)
T cd05062 159 KIGDFGMTR 167 (277)
T ss_pred EECCCCCcc
Confidence 999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=203.62 Aligned_cols=147 Identities=20% Similarity=0.266 Sum_probs=123.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc---CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL---DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..+|...+.||+|+||.||+|... .++.||+|.+... +...+|++++++++||||+++++++.. ....++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~--~~~~~l 163 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRW--KSTVCM 163 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEee--CCEEEE
Confidence 457999999999999999999753 3467999988643 234679999999999999999998874 345777
Q ss_pred EecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 229 SSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 229 ~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+|+++.+. ++.+++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 164 v~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 164 VMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred EehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 88777542 45566789999999999999 899999999999999999999999999987532
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 8899999999998743
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-25 Score=189.74 Aligned_cols=135 Identities=23% Similarity=0.365 Sum_probs=114.4
Q ss_pred ccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.+|+|+||.||+|.+.. ...||||.++... ......+.+|+.++++++||||+++++++.. ....
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK--SRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEec--CCce
Confidence 3568889999999999999998742 3469999987543 3445678899999999999999999998863 4457
Q ss_pred EEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++|||++++++. +.++++.|++.|++||| +++|+||||||+||++++++.+|++|||+++.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 8889999988554 34578999999999999 89999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-27 Score=193.77 Aligned_cols=138 Identities=22% Similarity=0.278 Sum_probs=114.4
Q ss_pred hhccccccceEeccCCcEEEEEEEEcC-----CcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLD-----ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
.....|+....||+|+||.||+|...+ .+.+|+|.++... ........+|+.+++.++|||++.+..++...
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~- 99 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH- 99 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-
Confidence 344578899999999999999996432 2359999997653 23445678999999999999999999988754
Q ss_pred cccEEEEecccCCCCHHH-----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC----Cce
Q 036266 223 LKPWYLSSCVMPNGDFPE-----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED----MVA 281 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~-----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~----~~~ 281 (312)
...+++++||.+.. +.+ ...|+.||+.|+.||| ++-|+||||||+|||+..+ |.+
T Consensus 100 d~~v~l~fdYAEhD-L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 100 DKKVWLLFDYAEHD-LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred CceEEEEehhhhhh-HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCee
Confidence 56788999998764 222 2359999999999999 8889999999999999876 899
Q ss_pred EEccccchhhh
Q 036266 282 HVSDFNISKLL 292 (312)
Q Consensus 282 kl~DFG~a~~~ 292 (312)
||+|||+|+.+
T Consensus 176 KIaDlGlaR~~ 186 (438)
T KOG0666|consen 176 KIADLGLARLF 186 (438)
T ss_pred EeecccHHHHh
Confidence 99999999997
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=199.55 Aligned_cols=136 Identities=21% Similarity=0.290 Sum_probs=113.2
Q ss_pred ccccccceEeccCCcEEEEEEEE------cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIF------LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILIL 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 223 (312)
.++|+..+.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~ 84 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-G 84 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-C
Confidence 45789999999999999999974 245779999997543 33345688899999999 689999999987543 3
Q ss_pred ccEEEEecccCCCCHHHH--------------------------------------------------------------
Q 036266 224 KPWYLSSCVMPNGDFPER-------------------------------------------------------------- 241 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~-------------------------------------------------------------- 241 (312)
...+++|||+++|++.+.
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 457888999998866433
Q ss_pred -----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 242 -----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 242 -----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++.|+++|++||| +++|+||||||+||++++++.+|++|||+++.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~ 228 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARD 228 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccc
Confidence 357889999999999 89999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-25 Score=192.08 Aligned_cols=151 Identities=27% Similarity=0.385 Sum_probs=129.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|++|.||++... +++.||+|.+.... ......+.+|++++++++||||+++++++. .....++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~~ 78 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ--DDSNLYL 78 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE--cCCeEEE
Confidence 36788899999999999999975 57889999997543 233466888999999999999999999887 4456888
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||++++++.+. ..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC
Confidence 9999998876544 358899999999999 899999999999999999999999999988752
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999888743
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-26 Score=199.73 Aligned_cols=153 Identities=24% Similarity=0.339 Sum_probs=133.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...|+..++||+|+||.||+|.+. +++.||+|+++... +.....+.+|+.++.+++++||.++|+.+. ....+++.
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl--~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL--KGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee--ecccHHHH
Confidence 345777789999999999999964 67889999998765 445677889999999999999999999887 55678899
Q ss_pred ecccCCCCHHHHHH------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDFPERLN------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~~------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||||.+|+..+.++ +++++..|+.|+| ..+.+|||||++||++..+|.+|++|||.|-..
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999997766553 8899999999999 889999999999999999999999999988664
Q ss_pred -------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+.++||.+|.+|+.++
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~ 214 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKL 214 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCccc
Confidence 89999999999998654
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-25 Score=188.70 Aligned_cols=153 Identities=24% Similarity=0.342 Sum_probs=128.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.+|+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++........
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888899999999999999865 57889999986432 2334568889999999999999999998875545677
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++++||++++++.+. ..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 889999998865443 468999999999999 889999999999999999999999999987421
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 8888999999888754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=192.56 Aligned_cols=135 Identities=25% Similarity=0.402 Sum_probs=113.5
Q ss_pred hccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|+..+.+|+|+||.||+|..++ +..||+|.++... ......+.+|+.++++++||||+++++++.. .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--G 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--C
Confidence 45688999999999999999997532 3469999886443 2233457889999999999999999998764 3
Q ss_pred ccEEEEecccCCCCHHHHH----------------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCce
Q 036266 224 KPWYLSSCVMPNGDFPERL----------------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~~----------------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~ 281 (312)
...+++|||+++|++.+.+ +++.|++.|++||| +++|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcE
Confidence 4678899999988765443 48899999999999 8999999999999999999999
Q ss_pred EEccccchh
Q 036266 282 HVSDFNISK 290 (312)
Q Consensus 282 kl~DFG~a~ 290 (312)
|++|||+++
T Consensus 159 ~L~Dfg~~~ 167 (288)
T cd05061 159 KIGDFGMTR 167 (288)
T ss_pred EECcCCccc
Confidence 999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=192.99 Aligned_cols=152 Identities=21% Similarity=0.264 Sum_probs=126.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
+..+|...+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++|+||+++++++.. ....++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHT--KETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEec--CCeEEE
Confidence 4567899999999999999999864 57889999987543 2223456789999999999999999999874 446778
Q ss_pred EecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
++||++++ .+.+...++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 81 VFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred EEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 88898643 22344568999999999999 889999999999999999999999999987531
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~ 205 (291)
T cd07870 158 QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP 205 (291)
T ss_pred CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 889999999999875
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-25 Score=201.57 Aligned_cols=136 Identities=21% Similarity=0.322 Sum_probs=113.7
Q ss_pred hhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 221 (312)
...++|...+.||+|+||.||+|++. .++.||+|+++... ....+.+.+|++++.++. |||||++++++..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~- 112 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK- 112 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-
Confidence 34456788899999999999999853 23569999997643 333456889999999997 9999999999874
Q ss_pred ccccEEEEecccCCCCHHHH------------------------------------------------------------
Q 036266 222 ILKPWYLSSCVMPNGDFPER------------------------------------------------------------ 241 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~------------------------------------------------------------ 241 (312)
....++++||+++|++.+.
T Consensus 113 -~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 113 -GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred -CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 3467888999998876443
Q ss_pred --------------------------------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 242 --------------------------------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 242 --------------------------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
++++.|++.||+||| .++|+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcc
Confidence 347789999999999 889999999999
Q ss_pred CeeeCCCCceEEccccchh
Q 036266 272 NNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.+|++|||+++
T Consensus 269 NiLl~~~~~~kL~DfGla~ 287 (401)
T cd05107 269 NVLICEGKLVKICDFGLAR 287 (401)
T ss_pred eEEEeCCCEEEEEecCcce
Confidence 9999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=192.60 Aligned_cols=134 Identities=25% Similarity=0.388 Sum_probs=114.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|...+.+|+|+||.||++... ++..+|+|.+........+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~ 81 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE--GDP 81 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCc
Confidence 356888899999999999999742 234589999876555556778999999999999999999999874 456
Q ss_pred EEEEecccCCCCHHH-------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc
Q 036266 226 WYLSSCVMPNGDFPE-------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV 280 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~ 280 (312)
.++++||++++++.+ .+.++.|++.||+||| +.+++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 788889998776543 3468999999999999 899999999999999999999
Q ss_pred eEEccccchh
Q 036266 281 AHVSDFNISK 290 (312)
Q Consensus 281 ~kl~DFG~a~ 290 (312)
+||+|||+++
T Consensus 159 ~kl~dfg~~~ 168 (288)
T cd05093 159 VKIGDFGMSR 168 (288)
T ss_pred EEeccCCccc
Confidence 9999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=191.15 Aligned_cols=126 Identities=19% Similarity=0.284 Sum_probs=106.0
Q ss_pred EeccCCcEEEEEEEEcC---CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 160 LLGTESLGSVYKWIFLD---ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+++++.++||||+++++.+.. ....+++|||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceEEEEEeCCC
Confidence 58999999999997543 3468888876433 3345668889999999999999999998873 4567889999999
Q ss_pred CCHHHH-----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 236 GDFPER-----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 236 g~~~~~-----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|++.+. .+++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEecccccc
Confidence 876543 368899999999999 8999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=192.58 Aligned_cols=151 Identities=22% Similarity=0.296 Sum_probs=120.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC---CCCceeeeeeeeeec---ccc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAIL---ILK 224 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~---~~~ 224 (312)
+|+..+.||+|+||.||+|... +++.||+|.++... ......+.+|+++++++ +||||+++++++... ...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999975 57889999987532 11223455677766655 799999999987532 234
Q ss_pred cEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 225 PWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..++++|++++. +..+...++.|++.||+|+| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 578888888753 33455679999999999999 88999999999999999999999999998864
Q ss_pred h-----------------------------------hhhhhhhhcCCCCCc
Q 036266 292 L-----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 292 ~-----------------------------------g~~~~e~~tg~~p~~ 307 (312)
. |++++|+++|++|+.
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 158 YSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred ccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 2 788888888887763
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=193.23 Aligned_cols=152 Identities=21% Similarity=0.366 Sum_probs=130.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+|+..+.+|+|++|.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++.. ....+++
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv 94 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 94 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCEEEEe
Confidence 3467889999999999999999964 688999999976554445668889999999999999999999874 4467889
Q ss_pred ecccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 230 SCVMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 230 ~~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|||++++++.+ ...++.|++.|+.||| +.+++||||||+||+++.++.+|++|||++...
T Consensus 95 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 95 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred ecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 99999986644 4468999999999999 889999999999999999999999999976431
Q ss_pred ------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..||.
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~ 216 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 888999999998874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=189.81 Aligned_cols=132 Identities=28% Similarity=0.393 Sum_probs=112.5
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+|+..+.+|+|++|.||++.++++..+|+|.+.... .....+.+|++++++++||||+++++++. .....+++|||
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~e~ 80 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT--KQRPIFIVTEY 80 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc--CCCceEEEEec
Confidence 3577888999999999999998777789999986532 22346788999999999999999999876 34467888999
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++++++. ..+.++.|++.|++||| +.+++||||||+||++++++.+|++|||+++
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccce
Confidence 9887554 34569999999999999 8899999999999999999999999999775
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=191.20 Aligned_cols=151 Identities=20% Similarity=0.233 Sum_probs=127.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.+|+|++|.||+|... +++.||+|++.... ....+.+.+|+.++++++|||++++++++.. ....+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--KRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee--CCEEEEE
Confidence 36788899999999999999976 57889999986532 2233567889999999999999999999874 4567888
Q ss_pred ecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||++++. +.++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 89998774 3445679999999999999 899999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+++
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~ 203 (286)
T cd07847 156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPG 203 (286)
T ss_pred cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 8888999999888764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.6e-25 Score=191.43 Aligned_cols=132 Identities=22% Similarity=0.306 Sum_probs=111.2
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.||+|++|.||+|... +++.||+|.++... ......+.+|+.++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CCeEEEEE
Confidence 4777889999999999999975 57889999987532 2234567889999999999999999999874 45678888
Q ss_pred cccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||+++. +..+...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 79 EFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred ecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECccccee
Confidence 888732 33445568999999999999 8999999999999999999999999999764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-25 Score=189.05 Aligned_cols=156 Identities=28% Similarity=0.359 Sum_probs=130.1
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
++.+++.+.....+|+|+||.||+|... +++.||+|.+........+.+.+|++++++++|+||+++++++.. ....
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 80 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NGFF 80 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CCEE
Confidence 3455666777789999999999999965 567899999876655566788999999999999999999998874 4567
Q ss_pred EEEecccCCCCHHHH---------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchh
Q 036266 227 YLSSCVMPNGDFPER---------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~---------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~ 290 (312)
++++||++++++... ..++.|++.|++||| +.+|+||||||+||+++. ++.+||+|||.+.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 888889998866543 247889999999999 899999999999999986 6799999999764
Q ss_pred hh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.|+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 31 8888899999888764
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.8e-25 Score=189.43 Aligned_cols=151 Identities=23% Similarity=0.451 Sum_probs=128.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+.|+..+.||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++||||+++++++. ....++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~~v~ 79 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT---QEPIYIIT 79 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc---cCCcEEEE
Confidence 346788899999999999999998888899999987543 23457889999999999999999998764 23478889
Q ss_pred cccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+ ...++.|++.|++||| +.+++||||||+||++++++.++++|||+++..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 9999886644 3468999999999999 889999999999999999999999999987531
Q ss_pred ---------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+++
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 206 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPG 206 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 888889998 8888764
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.6e-25 Score=189.23 Aligned_cols=134 Identities=29% Similarity=0.421 Sum_probs=110.9
Q ss_pred cccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc----c
Q 036266 155 FNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL----K 224 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~ 224 (312)
|...+.+|+|+||.||+|.... +..||+|.++... ......+.+|++.+++++||||+++++++..... .
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999998642 3569999987543 3345678899999999999999999998754322 3
Q ss_pred cEEEEecccCCCCHHH------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 225 PWYLSSCVMPNGDFPE------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
..++++||+++|++.. .+.++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 4688889999886643 3458999999999999 889999999999999999999999999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|+++.
T Consensus 158 g~~~~ 162 (273)
T cd05035 158 GLSKK 162 (273)
T ss_pred cceee
Confidence 99764
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=188.91 Aligned_cols=150 Identities=30% Similarity=0.408 Sum_probs=125.8
Q ss_pred cccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHh--HHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERA--FRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.||+|+||.||+++... ++.||+|++....... .....+|+.++++++||||+++++++.. ....+++|+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc--ccccccccc
Confidence 5678899999999999999764 5679999998764322 2234569999999999999999999874 556778889
Q ss_pred ccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 232 VMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 232 ~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
+++++++.+ +..++.|+++||+||| +.+|+||||||+||++++++.++|+|||.+...
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~ 155 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENF 155 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEB
T ss_pred ccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccc
Confidence 999986654 3469999999999999 889999999999999999999999999998631
Q ss_pred ------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|+++|..|+.+.
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 88888888888887653
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-25 Score=191.84 Aligned_cols=134 Identities=27% Similarity=0.384 Sum_probs=114.6
Q ss_pred ccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
..+|...+.+|+|+||.||+|...+ ++.||||.++..... ..+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE--GD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec--CC
Confidence 3567888999999999999998632 367999999765433 45788999999999999999999999874 35
Q ss_pred cEEEEecccCCCCHHHH--------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 225 PWYLSSCVMPNGDFPER--------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~--------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
..+++|||++++++.+. ..++.|++.|++|+| +.+++||||||+||+++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCC
Confidence 68899999998866543 457999999999999 8899999999999999999
Q ss_pred CceEEccccchh
Q 036266 279 MVAHVSDFNISK 290 (312)
Q Consensus 279 ~~~kl~DFG~a~ 290 (312)
+.+|++|||+++
T Consensus 159 ~~~kl~d~g~~~ 170 (280)
T cd05049 159 LVVKIGDFGMSR 170 (280)
T ss_pred CeEEECCcccce
Confidence 999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-26 Score=189.52 Aligned_cols=155 Identities=23% Similarity=0.381 Sum_probs=133.3
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEE-EcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecc
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILI 222 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 222 (312)
+.++...++ +.+|+|+++.|-.|. ..++..||||++.+.......++.+|++++.+.+ |+||+++++||+ +
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE--d 147 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFE--D 147 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc--c
Confidence 566655554 478999999999988 5688999999999887677788899999999886 999999999998 6
Q ss_pred cccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEcccc
Q 036266 223 LKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSDFN 287 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~DFG 287 (312)
...+|+++|-|.+|++.+.+ ++..+|+.||.||| .++|.|||+||+|||-.+. .-+||+||-
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfD 224 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFD 224 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccc
Confidence 66789999999999876654 59999999999999 9999999999999999643 358999998
Q ss_pred chhhh------------------------------------------------hhhhhhhhcCCCCCccc
Q 036266 288 ISKLL------------------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 288 ~a~~~------------------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
++.-+ |+++|-|+.|..||.++
T Consensus 225 LgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 225 LGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 76553 99999999999998764
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-25 Score=188.09 Aligned_cols=150 Identities=23% Similarity=0.356 Sum_probs=127.1
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.+|+|+||.||+|+.. +++.||||.++... ......+.+|++++++++||||+++++++.. ....++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE--DNELNI 79 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--CCeEEE
Confidence 46888999999999999999965 67889999876422 3344568889999999999999999998874 346778
Q ss_pred EecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++||+++|++.. ...++.|++.|++||| +.+++||||||+||+++.++.++++|||+++.+
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 888999886643 3468999999999999 899999999999999999999999999976542
Q ss_pred ------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~ 207 (267)
T cd08228 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred cchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 888999999998864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-25 Score=191.07 Aligned_cols=150 Identities=26% Similarity=0.422 Sum_probs=122.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.||+|+||.||+|.+. +++ .+|+|.+.... .....++..|+..+++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Ccc
Confidence 46788899999999999999864 344 47888876432 2334567788889999999999999998752 335
Q ss_pred EEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++||+++|++.+ ...++.|++.|++||| +++++||||||+||++++++.+|++|||+++..
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 67788999886543 4469999999999999 889999999999999999999999999988532
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+.+
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 888899987 8888754
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=193.19 Aligned_cols=152 Identities=28% Similarity=0.396 Sum_probs=124.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc--EEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET--NVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.+|+|+||.||+|.+. ++. .+|+|.++... ......+.+|++++.++ +||||+++++++.. ....
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~--~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC--CCCc
Confidence 456888899999999999999965 444 36888776432 34456788899999999 89999999999874 4457
Q ss_pred EEEecccCCCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 227 YLSSCVMPNGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 227 ~l~~~~~~~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
+++|||++++++. +.+.++.|++.|++||| +++|+||||||+||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCC
Confidence 8888999887553 34568999999999999 8999999999999999999
Q ss_pred CceEEccccchhhh-----------------------------------hhhhhhhhc-CCCCCcc
Q 036266 279 MVAHVSDFNISKLL-----------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 279 ~~~kl~DFG~a~~~-----------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+.+||+|||+++.. |++++|++| |..|+..
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 226 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 226 (303)
T ss_pred CcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCccc
Confidence 99999999987421 888888887 8888743
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=187.16 Aligned_cols=150 Identities=23% Similarity=0.341 Sum_probs=127.7
Q ss_pred ccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
+|...+.+|+|+||.||+|...+++.+|+|.++... ......+.+|++++++++|+||+++++++.. ....+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCeEE
Confidence 467788999999999999988788899999986432 2234568889999999999999999999874 45678
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+++||++++++.+. ..++.|++.|++|+| +.+|+|+||||+||++++++.+|++|||+++..
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 88899999876544 358899999999999 889999999999999999999999999987531
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 210 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCcccc
Confidence 8889999999998753
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=190.34 Aligned_cols=134 Identities=25% Similarity=0.323 Sum_probs=117.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.|+..+.+|.|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++.+.. ....+++|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 88 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW--DGKLWIMI 88 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe--CCeEEEEE
Confidence 466888999999999999999975 478899999987655666778899999999999999999998874 34678899
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.. ...++.|+++|++||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 89 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 89 EFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred ecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999886543 3469999999999999 8899999999999999999999999999764
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=187.57 Aligned_cols=153 Identities=24% Similarity=0.320 Sum_probs=129.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh-----hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ-----LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.+|+|++|.||+|... +++.||+|.+... .......+.+|++++++++||||+++++++.......+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46888999999999999999964 5888999987532 13345678899999999999999999998876555667
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++++||++++++.+ ..+++.|++.|+.||| +.+++||||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 88999998886543 3468999999999999 889999999999999999999999999988521
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 8888999999888754
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.4e-25 Score=191.74 Aligned_cols=150 Identities=26% Similarity=0.325 Sum_probs=124.3
Q ss_pred ccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
+|+..+.+|+|+||.||+|.... ...+|+|.+.... ......+.+|+.+++.++||||+++++.+.. ....
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ--DGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec--CCCc
Confidence 36778899999999999998531 2468999887543 3345678899999999999999999998874 3456
Q ss_pred EEEecccCCCCHHHH------------------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCC
Q 036266 227 YLSSCVMPNGDFPER------------------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKP 270 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp 270 (312)
++++||+++|++.+. +.++.|++.|++||| +.+++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhh
Confidence 788889998866543 578999999999999 89999999999
Q ss_pred CCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 271 SNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+||++++++.+||+|||+++.. |++++|++| |..|+++
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999998531 888999998 8888764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=190.85 Aligned_cols=134 Identities=22% Similarity=0.322 Sum_probs=116.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|+..+.+|.|++|.||++... +++.+|+|.+........+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFY--ENKLWILI 81 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEec--CCeEEEEe
Confidence 456888899999999999999975 578899999986655566778899999999999999999999874 45678899
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.. ...++.|++.|++||| +.+|+||||||+||+++.++.++++|||++.
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~ 151 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSA 151 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccch
Confidence 9999986543 3469999999999999 8899999999999999999999999999764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.93 E-value=7e-25 Score=187.45 Aligned_cols=126 Identities=27% Similarity=0.440 Sum_probs=108.3
Q ss_pred EeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC
Q 036266 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD 237 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~ 237 (312)
.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.. ....+++|||+++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~ 79 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIVMELVQGGD 79 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEEEeeccCCc
Confidence 6899999999999975 68889999886533 3445678899999999999999999999874 456788889998875
Q ss_pred HHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 238 FPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 238 ~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+.+ .+.++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 142 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSR 142 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCc
Confidence 543 4569999999999999 8999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.93 E-value=9e-25 Score=186.51 Aligned_cols=126 Identities=32% Similarity=0.519 Sum_probs=108.7
Q ss_pred EeccCCcEEEEEEEEcCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCCH
Q 036266 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDF 238 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~ 238 (312)
.||+|+||.||+|...+++.+|+|.+.... ......+.+|++++++++||||+++++++.. ....+++|||++++++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L 79 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--RQPIYIVMELVPGGDF 79 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec--CCccEEEEECCCCCcH
Confidence 689999999999998788899999987543 3334568899999999999999999999874 3457888889988754
Q ss_pred H-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 239 P-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 239 ~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
. +.+.++.|++.|+.|+| +++++||||||+||++++++.+|++|||++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~ 141 (250)
T cd05085 80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSR 141 (250)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccce
Confidence 3 44578999999999999 8999999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-25 Score=189.22 Aligned_cols=148 Identities=32% Similarity=0.506 Sum_probs=122.0
Q ss_pred cceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 157 EWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+.||.|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||+++++++. .....++++
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~--~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI--ENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE--SSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc--ccccccccc
Confidence 4578999999999999976 24569999996543 345788999999999999999999999998 344478888
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||+++|++. ++.+|+.|+++||+||| +.+++|+||+++||+++.++.+||+|||+++..
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence 999988554 44579999999999999 889999999999999999999999999987653
Q ss_pred ----------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ----------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ----------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|+++ |+.|+.+.
T Consensus 158 ~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~ 209 (259)
T PF07714_consen 158 KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY 209 (259)
T ss_dssp SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 899999999 67887653
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-25 Score=188.71 Aligned_cols=133 Identities=27% Similarity=0.476 Sum_probs=113.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.+|...+.+|+|++|.||+|... +++.||+|.+... ......+.+|++++++++||||+++++++.. ....+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 82 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--EPPFYIITE 82 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcC--CCCcEEEEE
Confidence 45778889999999999999965 4778999998754 3334678899999999999999999998863 446788888
Q ss_pred ccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 232 VMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 232 ~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|++++++.+ ++.++.|+++|++||| +.+++||||||+||++++++.+|++|||+++.
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~ 153 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 153 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccc
Confidence 998886543 3468999999999999 88999999999999999999999999997754
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=187.53 Aligned_cols=151 Identities=25% Similarity=0.367 Sum_probs=128.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
++|+..+.+|+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~ 79 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD--ETL 79 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC--CeE
Confidence 46888999999999999999864 57889999986432 22345688899999999999999999998744 478
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++++||++++++.+. .+++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++..
T Consensus 80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 888999999866543 468999999999999 899999999999999999999999999987421
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 8899999999998743
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.2e-25 Score=189.99 Aligned_cols=134 Identities=27% Similarity=0.415 Sum_probs=111.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|+..+.||+|+||.||+|.+. +++ .||+|.++... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---ST 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---CC
Confidence 456888899999999999999853 444 48999987543 3445678899999999999999999998863 23
Q ss_pred EEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.+++++|+++|++. ..+.++.|++.|++||| +++|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceee
Confidence 56778899888543 44568999999999999 89999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-25 Score=195.28 Aligned_cols=134 Identities=22% Similarity=0.170 Sum_probs=111.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--CCcEEEEEEeehh-----hhHhHHHHHHHHHHhhcCCCCceee-eeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--DETNVAIKVFNLQ-----LERAFRSFDSKCEVHKNVRHRNLIK-ILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~ 221 (312)
....+|...+.||+|+||.||+|.+. +++.||||++... .......+.+|++++++++|+|+++ ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 45667999999999999999999864 4677899987532 1233566899999999999999985 4432
Q ss_pred ccccEEEEecccCCCCHHHH-----HHHHHHHHHHHHHHhCCCCCCceecCC-CCCCeeeCCCCceEEccccchhhh
Q 036266 222 ILKPWYLSSCVMPNGDFPER-----LNIMIDMALAFEYLHHGRSTPMVHCDL-KPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~-----~~i~~~i~~~l~ylH~~~~~~iiHrDl-kp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
...+++|||++++++... ..++.|+++||+||| +++|+|||| ||+|||++.++.+||+|||+|+.+
T Consensus 91 --~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 91 --GKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred --CCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 236889999999987642 468999999999999 899999999 999999999999999999999865
|
|
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-25 Score=189.15 Aligned_cols=150 Identities=26% Similarity=0.451 Sum_probs=125.6
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.++|+..+.+|+|++|.||+|.+.++..||+|+++.... ....+.+|++++++++||||+++++.+.. ...+++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv~e 80 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVTE 80 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC---CCcEEEEE
Confidence 456889999999999999999877667799999975322 23568899999999999999999987642 34678899
Q ss_pred ccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|+++|++. ..+.++.|+++||+|+| +.+++||||||+||++++++.+||+|||.++.+
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 81 YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred cCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 99988654 34568999999999999 899999999999999999999999999987532
Q ss_pred --------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |..|+++
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~ 206 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 206 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 788888888 7777754
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=185.66 Aligned_cols=149 Identities=26% Similarity=0.338 Sum_probs=127.2
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|... +++.||+|.+.... ......+.+|++++++++|||++++++++.. ....++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD--KGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc--CCEEEEEE
Confidence 4677789999999999999975 57889999987532 3455678899999999999999999998874 45678889
Q ss_pred cccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+. .+++.|++.|+.||| +.+++||||||+||+++.++.+|++|||+++.+
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 99998866443 468999999999999 899999999999999999999999999976642
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 202 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD 202 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 888999999998875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-25 Score=191.16 Aligned_cols=151 Identities=23% Similarity=0.285 Sum_probs=125.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.+|+|++|.||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++. .....+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH--TKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe--cCCeEEEE
Confidence 357888999999999999999975 578899999875432 22344678999999999999999999987 44567888
Q ss_pred ecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 230 SCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 230 ~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||+++ ++. ....++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 82 FEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 899974 443 34568899999999999 889999999999999999999999999976431
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+++
T Consensus 158 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 158 KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888753
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-25 Score=191.89 Aligned_cols=151 Identities=26% Similarity=0.400 Sum_probs=124.7
Q ss_pred cccccceEeccCCcEEEEEEEEcC-Cc--EEEEEEeehh-hhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD-ET--NVAIKVFNLQ-LERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 227 (312)
++|+..+.||+|+||.||+|...+ +. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.. ....+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN--RGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc--CCcce
Confidence 568889999999999999998753 33 4788888742 234456788999999999 79999999998864 34578
Q ss_pred EEecccCCCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC
Q 036266 228 LSSCVMPNGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM 279 (312)
Q Consensus 228 l~~~~~~~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~ 279 (312)
+++||+++|++. +.+.++.|++.|++||| +.+|+||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCC
Confidence 888899887653 33568999999999999 89999999999999999999
Q ss_pred ceEEccccchhhh-----------------------------------hhhhhhhhc-CCCCCcc
Q 036266 280 VAHVSDFNISKLL-----------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 280 ~~kl~DFG~a~~~-----------------------------------g~~~~e~~t-g~~p~~e 308 (312)
.+||+|||++... |++++|+++ |..|+..
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~ 221 (297)
T cd05089 157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCG 221 (297)
T ss_pred eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999999987421 888999997 8888754
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=189.64 Aligned_cols=132 Identities=22% Similarity=0.298 Sum_probs=113.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|+..+.+|+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++|||++++++++.. ....++++||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~~v~e~ 83 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIEF 83 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCEEEEEEEe
Confidence 3567788999999999999975 467799999976555556778899999999999999999998874 4467888889
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++++++. .+..++.|+++||+||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccc
Confidence 9887553 34569999999999999 8999999999999999999999999999774
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=182.33 Aligned_cols=150 Identities=22% Similarity=0.343 Sum_probs=131.9
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|++.+.+|+|.++.||.|.. .+.+.++||+++.- ..+.+.+|+.+|+.++ ||||+++++....+......+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 567899999999999999999984 46678999999853 3466889999999998 999999999998877777888
Q ss_pred EecccCCCCHHHH---------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchhhh------
Q 036266 229 SSCVMPNGDFPER---------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISKLL------ 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~---------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~~~------ 292 (312)
++||+.+-|+.+. .-++.++++||.||| ++||+|||+||.|+++|. .-..+++|+|+|.++
T Consensus 113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence 8899999877654 358999999999999 999999999999999994 567999999999986
Q ss_pred ------------------------------hhhhhhhhcCCCCC
Q 036266 293 ------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~ 306 (312)
|+|+.+|+..+.||
T Consensus 190 nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF 233 (338)
T KOG0668|consen 190 NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 233 (338)
T ss_pred eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc
Confidence 99999999999986
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=187.44 Aligned_cols=150 Identities=24% Similarity=0.448 Sum_probs=125.8
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
++|...+.||+|++|.||+|....+..+|+|.+.... ...+.+.+|++++++++|||++++++++. ....+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~~~v~e~ 81 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS---EEPIYIVTEF 81 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc---CCCcEEEEEc
Confidence 5688889999999999999998776779999886542 23456888999999999999999998874 2346788899
Q ss_pred cCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 233 MPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 233 ~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
++++++. .+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 82 MGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 9987553 34568999999999999 889999999999999999999999999988532
Q ss_pred -------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |..|+++.
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 207 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM 207 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 788889988 88887653
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-25 Score=190.04 Aligned_cols=136 Identities=21% Similarity=0.303 Sum_probs=115.7
Q ss_pred cccccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..|+..+.+|+|+||.||.|... ++..||+|.++... ......+.+|++++++++|||++++.+++........
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 34678899999999999999742 46779999987543 3345678999999999999999999998876545678
Q ss_pred EEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++|||++++++.+ +..++.|++.||+|+| +++++||||||+||++++++.+||+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 89999999886543 4568999999999999 89999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=189.43 Aligned_cols=153 Identities=22% Similarity=0.241 Sum_probs=131.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|...+.+|.|++|.||+|... +++.+|+|.+.... ......+.+|++++++++||||+++++++........+++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35778899999999999999975 57889999987543 23456788999999999999999999998766666789999
Q ss_pred cccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 231 CVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 231 ~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
||++++++.+. ..++.|+++|++||| ..+++|+||+|+||++++++.++++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999877542 359999999999999 899999999999999999999999999987542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (287)
T cd06621 158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP 205 (287)
T ss_pred cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 8899999999999864
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=185.80 Aligned_cols=149 Identities=21% Similarity=0.361 Sum_probs=126.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.+|+|+||.||++... +++.+|+|.++... ....+.+.+|+.++++++||||+++++.+. ....+++++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE--ADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--ECCEEEEEEe
Confidence 4677899999999999999965 57889999986532 344567788999999999999999999887 4456788999
Q ss_pred ccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|+++|++.+. .+++.|++.|+.||| +.+|+|+||||+||++++++.++++|||.++..
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 155 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA 155 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence 9998865443 368999999999999 899999999999999999999999999987542
Q ss_pred -------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 201 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQ 201 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCC
Confidence 777888888888875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.1e-25 Score=191.61 Aligned_cols=134 Identities=22% Similarity=0.345 Sum_probs=110.3
Q ss_pred cccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..|...+.+|+|+||.||+|.... ++.||+|+++... ......+.+|+.++++++||||+++++++... ..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--QP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--Cc
Confidence 356777899999999999998532 4679999997543 23346688999999999999999999988744 34
Q ss_pred EEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 226 WYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
.+++++|++++++.+ .++++.|++.|++|+| +++|+||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecC
Confidence 677777887765433 3468899999999999 899999999999999999
Q ss_pred CCceEEccccchhh
Q 036266 278 DMVAHVSDFNISKL 291 (312)
Q Consensus 278 ~~~~kl~DFG~a~~ 291 (312)
++.+||+|||+++.
T Consensus 160 ~~~~kl~Dfg~~~~ 173 (283)
T cd05091 160 KLNVKISDLGLFRE 173 (283)
T ss_pred CCceEecccccccc
Confidence 99999999998653
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.1e-25 Score=189.49 Aligned_cols=137 Identities=22% Similarity=0.283 Sum_probs=114.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc----c
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI----L 223 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~----~ 223 (312)
.+.+.|+..+.+|+|+||.||+|... +++.||+|.+.... .....+.+|+.+++++ +||||+++++++.... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45667888899999999999999865 57889999997543 2335678899999998 6999999999886432 2
Q ss_pred ccEEEEecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 224 KPWYLSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
..++++|||++++++.+ ...++.|++.|++||| +++|+||||||+||++++++.+||+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 45789999999885544 3358999999999999 889999999999999999999999999987
Q ss_pred h
Q 036266 290 K 290 (312)
Q Consensus 290 ~ 290 (312)
+
T Consensus 159 ~ 159 (272)
T cd06637 159 A 159 (272)
T ss_pred e
Confidence 5
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=186.65 Aligned_cols=135 Identities=23% Similarity=0.427 Sum_probs=116.0
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|...+.+|+|++|.||+|...+++.||||.+.... ...+++.+|+.++++++||||+++++++.. ....+++|
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~ 80 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSE--EEPIYIVT 80 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeec--CCceEEEE
Confidence 456788999999999999999998777889999997543 234668899999999999999999998763 35578888
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++++. +...++.|++.|++||| +.+++||||||+||++++++.+|++|||.++.
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~ 152 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARL 152 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECcccccee
Confidence 899887554 34579999999999999 88999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=189.92 Aligned_cols=151 Identities=27% Similarity=0.398 Sum_probs=127.0
Q ss_pred cccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|...+.+|+|+||.||+|... ++..+|+|.+........+.+.+|++++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 82 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGD--GDPL 82 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc--CCce
Confidence 45777889999999999999742 234589999876655556778999999999999999999999874 4567
Q ss_pred EEEecccCCCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 227 YLSSCVMPNGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 227 ~l~~~~~~~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
+++|||++++++. .++.++.|++.|++||| +++|+||||||+||+++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 83 IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred EEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccC
Confidence 8889999877554 34579999999999999 8999999999999999999
Q ss_pred CceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 279 MVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 279 ~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+.+||+|||+++.. |++++|++| |+.|+.+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 228 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 228 (291)
T ss_pred CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999987531 888899988 8888643
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=189.46 Aligned_cols=133 Identities=29% Similarity=0.450 Sum_probs=112.6
Q ss_pred cccccceEeccCCcEEEEEEEEcC-C-----cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD-E-----TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
++|+..+.||+|+||.||+|.... + ..||+|.++... ......+.+|++++++++||||+++++++. ....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~--~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT--KEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc--CCCc
Confidence 468888999999999999998643 2 469999987543 334566889999999999999999999887 3445
Q ss_pred EEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 226 WYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
.++++||+++|++.+. +.++.|++.|++||| +.+++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcC
Confidence 7888899998876443 469999999999999 889999999999999999
Q ss_pred CCceEEccccchh
Q 036266 278 DMVAHVSDFNISK 290 (312)
Q Consensus 278 ~~~~kl~DFG~a~ 290 (312)
++.+||+|||+++
T Consensus 160 ~~~~~L~dfg~~~ 172 (283)
T cd05048 160 GLTVKISDFGLSR 172 (283)
T ss_pred CCcEEECCCccee
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=187.70 Aligned_cols=134 Identities=26% Similarity=0.401 Sum_probs=112.7
Q ss_pred cccccceEeccCCcEEEEEEEEc-C---CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-D---ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.+|+..+.+|+|+||.||+|... + +..+|+|.++... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--SKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec--CCccE
Confidence 46788899999999999999864 2 2369999987543 3345678899999999999999999998864 34578
Q ss_pred EEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|||++++++. +.++++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++.
T Consensus 82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccc
Confidence 889999988553 44578999999999999 89999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=216.56 Aligned_cols=154 Identities=23% Similarity=0.309 Sum_probs=134.4
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.-..++|.+.+.||+|+||.|..++.+ +++.||+|++.+.. ......|..|-.+|..-+.+-|+.++-.|. +..
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ--D~~ 148 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ--DER 148 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc--Ccc
Confidence 345678999999999999999999975 57889999998732 233456888999999999999999988888 778
Q ss_pred cEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++|++|+||+|||+-..+ -|+..|+.||.-+| +.|+|||||||+|||+|..|++||+|||.+-.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhc
Confidence 899999999999876544 37899999999999 999999999999999999999999999987664
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|+.+|||+.|..||-
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 999999999999973
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=186.11 Aligned_cols=125 Identities=23% Similarity=0.394 Sum_probs=106.0
Q ss_pred EeccCCcEEEEEEEEc---CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 160 LLGTESLGSVYKWIFL---DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.. ...+++|||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEeCCC
Confidence 3799999999999864 34569999987653 3345678899999999999999999998752 357889999998
Q ss_pred CCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 236 GDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 236 g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++.+ .++++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 143 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSK 143 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccc
Confidence 86544 4568999999999999 8899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-24 Score=190.33 Aligned_cols=151 Identities=21% Similarity=0.377 Sum_probs=129.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+|+..+.+|.|++|.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++.. ....++++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 95 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLV--GDELFVVM 95 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEec--CceEEEEE
Confidence 456889999999999999999864 688899999976554455678899999999999999999999873 45678889
Q ss_pred cccCCCCH-----------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
||++++++ .++..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 172 (296)
T cd06655 96 EYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR 172 (296)
T ss_pred EecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence 99998855 445679999999999999 899999999999999999999999999976532
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~ 216 (296)
T cd06655 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (296)
T ss_pred CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888999999998874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.1e-25 Score=203.21 Aligned_cols=155 Identities=20% Similarity=0.207 Sum_probs=119.8
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCC------Cceeeeeeeeeec
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRH------RNLIKILTTIAIL 221 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~~~~ 221 (312)
.....+|+..+.||+|+||.||+|.+. .++.||||+++... ...+.+..|++++++++| .+++++++++...
T Consensus 125 ~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 125 DVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred ccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 345678999999999999999999965 57789999997532 223445667777766654 4588888887643
Q ss_pred ccccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCC----------
Q 036266 222 ILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDM---------- 279 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~---------- 279 (312)
...++++|+++.+. ++.+...|+.||+.||+||| . .+||||||||+|||++.++
T Consensus 204 -~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 204 -TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred -CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 34577888776432 33445579999999999999 6 5999999999999998665
Q ss_pred ------ceEEccccchhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 280 ------VAHVSDFNISKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 280 ------~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
.+||+|||.+... |++++||++|+.||+.
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4999999976431 9999999999999863
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-24 Score=187.36 Aligned_cols=133 Identities=22% Similarity=0.454 Sum_probs=113.7
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.++|+..+.+|+|++|.||+|...++..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.. ...+++||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~lv~e 80 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIYIVTE 80 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC---CCcEEEEE
Confidence 457888999999999999999987778899999975432 33568899999999999999999988742 34678888
Q ss_pred ccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 232 VMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 232 ~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|++++++. ++.+++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++.
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 81 YMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARL 151 (260)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeee
Confidence 99887553 45679999999999999 88999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=187.42 Aligned_cols=136 Identities=25% Similarity=0.398 Sum_probs=114.6
Q ss_pred hccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|...+.+|+|+||.||+|.... +..||+|.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 81 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVST--G 81 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC--C
Confidence 34678889999999999999998642 3579999987543 3344568899999999999999999999874 3
Q ss_pred ccEEEEecccCCCCHHH----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCce
Q 036266 224 KPWYLSSCVMPNGDFPE----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~ 281 (312)
...+++|||+++|++.+ .+.++.|++.|+.||| +.+++||||||+||+++.++.+
T Consensus 82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCE
Confidence 56788889999887654 3458899999999999 8999999999999999999999
Q ss_pred EEccccchhh
Q 036266 282 HVSDFNISKL 291 (312)
Q Consensus 282 kl~DFG~a~~ 291 (312)
||+|||+++.
T Consensus 159 kl~dfg~~~~ 168 (277)
T cd05032 159 KIGDFGMTRD 168 (277)
T ss_pred EECCcccchh
Confidence 9999998753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=185.12 Aligned_cols=133 Identities=29% Similarity=0.465 Sum_probs=115.6
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.++|+..+.+|+|++|.||+|... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++.. ....+++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 80 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ--GNPLYIVTE 80 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC--CCCeEEEEE
Confidence 457888899999999999999864 78899999986543 45678899999999999999999998874 556788889
Q ss_pred ccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 232 VMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 232 ~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|++++++.+ ...++.|++.|+.||| +.+++||||||+||++++++.+||+|||.++.
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccc
Confidence 998875543 4569999999999999 89999999999999999999999999998765
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=190.23 Aligned_cols=137 Identities=25% Similarity=0.397 Sum_probs=114.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
...++|+..+.+|+|+||.||++.... ...+|+|.+.... ......+.+|+++++++ +||||+++++++..
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 87 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ- 87 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC-
Confidence 345678888999999999999998642 2569999987543 34446688999999999 79999999998864
Q ss_pred ccccEEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 222 ILKPWYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
....+++|||+++|++... ++++.|++.|++||| +.+|+||||||+||
T Consensus 88 -~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Ni 163 (293)
T cd05053 88 -EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNV 163 (293)
T ss_pred -CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeE
Confidence 4457888899988866544 358999999999999 89999999999999
Q ss_pred eeCCCCceEEccccchhh
Q 036266 274 LLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~~ 291 (312)
++++++.+|++|||+++.
T Consensus 164 l~~~~~~~kL~Dfg~~~~ 181 (293)
T cd05053 164 LVTEDHVMKIADFGLARD 181 (293)
T ss_pred EEcCCCeEEeCccccccc
Confidence 999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=184.66 Aligned_cols=135 Identities=24% Similarity=0.355 Sum_probs=116.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|+..+.+|+|++|.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~l~~ 79 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLR--RDKLWIVM 79 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEe--CCEEEEEE
Confidence 357888999999999999999965 577899999987655566788999999999999999999998864 45678889
Q ss_pred cccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++++.+. ..++.|++.|++||| +.+|+||||||+||++++++.+|++|||++..
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 150 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQ 150 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchh
Confidence 99988865443 358999999999999 88999999999999999999999999997754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-25 Score=188.75 Aligned_cols=134 Identities=22% Similarity=0.341 Sum_probs=115.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|...+.+|+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++.+.. ....++++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~~~~~lv~ 85 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--RDKLWICM 85 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--CCEEEEEE
Confidence 346788889999999999999864 578899999976554445667889999999999999999998874 45678889
Q ss_pred cccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.+. ..++.|++.|++||| ..+++||||||+||+++.++.+||+|||++.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeee
Confidence 99999876554 468999999999999 8899999999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-25 Score=190.71 Aligned_cols=133 Identities=21% Similarity=0.296 Sum_probs=112.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|+.. +|+.||+|.++... ......+.+|++++++++||||+++++++. +....++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH--SDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc--cCCceEEEE
Confidence 3677889999999999999975 68889999997532 222345778999999999999999999987 445678888
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++ ++.....++.||++||.||| .++|+||||||+||+++.++.+||+|||+++.
T Consensus 79 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 148 (284)
T cd07839 79 EYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARA 148 (284)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhc
Confidence 898743 34455679999999999999 88999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=187.89 Aligned_cols=134 Identities=22% Similarity=0.296 Sum_probs=108.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHH-hhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEV-HKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.+|+|+||.||++... +++.||+|+++... ......+..|+.. ++..+||||+++++++.. ....+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~--~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR--EGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec--CCcEEEE
Confidence 36788899999999999999975 68899999997643 2223445556654 667789999999999874 4457888
Q ss_pred ecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+||+++. ++....+++.|++.|++||| +. +++||||||+||+++.++.+||+|||+++.
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 8898742 33445579999999999999 65 899999999999999999999999998763
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=186.58 Aligned_cols=126 Identities=22% Similarity=0.358 Sum_probs=106.2
Q ss_pred EeccCCcEEEEEEEEcC---CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 160 LLGTESLGSVYKWIFLD---ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||+++++++.. ....+++|||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE--VTPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CCCcEEEEECCCC
Confidence 58999999999998643 3569999987543 2334568889999999999999999998864 4457888999999
Q ss_pred CCHHHH-----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 236 GDFPER-----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 236 g~~~~~-----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|++.+. .+++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~ 148 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSH 148 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccc
Confidence 876543 357899999999999 8899999999999999999999999999774
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-24 Score=191.64 Aligned_cols=154 Identities=23% Similarity=0.306 Sum_probs=128.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|... +++.||+|.++.... .....+.+|+.++++++|+||+++++++........+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 4567999999999999999999975 588899999875431 1223456799999999999999999998755555678
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++. ++.+...++.|+++|++||| +.+++||||||+||++++++.+||+|||+++..
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 999998752 44556679999999999999 889999999999999999999999999977642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 778888888888775
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-25 Score=201.35 Aligned_cols=129 Identities=16% Similarity=0.172 Sum_probs=108.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
...|...+.||+|+||.||+|.+. .++.||||.... ..+.+|++++++++|+|||++++++... ...+++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~~~lv~ 239 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVG--GLTCLVL 239 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEEC--CEEEEEE
Confidence 457899999999999999999975 477899996432 2356899999999999999999987743 3456666
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++.+. ++.++++++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 240 e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~ 309 (461)
T PHA03211 240 PKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACF 309 (461)
T ss_pred EccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCcee
Confidence 666432 45666789999999999999 88999999999999999999999999999864
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=185.56 Aligned_cols=151 Identities=22% Similarity=0.437 Sum_probs=127.2
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.+|+|+||.||++...++..+|+|.+.... .....+.+|++++++++|+||+++++.+.. ...+++|
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~v~ 79 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIYIIT 79 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeEEEE
Confidence 356788899999999999999987777789999887542 334678889999999999999999988764 4568889
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++. +++.++.|++.|++|+| +.+++||||||+||+++.++.+|++|||.++..
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 999988654 34568899999999999 889999999999999999999999999976532
Q ss_pred ---------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |..|+++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 788888888 7777754
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=189.54 Aligned_cols=149 Identities=23% Similarity=0.366 Sum_probs=125.3
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|+.. +++.||||.++... ......+.+|++++++++||||+++++++. +....+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH--TENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc--cCCcEEEEe
Confidence 4778899999999999999875 67889999987543 223356888999999999999999999987 445678888
Q ss_pred cccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 231 CVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||+++. ++.....++.|++.|++||| ..+++||||||+||++++++.+|++|||+++..
T Consensus 79 e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 79 EFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred eccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 888632 34556679999999999999 889999999999999999999999999987532
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|++
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 202 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 888899999988874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=187.42 Aligned_cols=134 Identities=27% Similarity=0.429 Sum_probs=113.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|+..+.||+|+||.||+|... ++. .+|+|.+.... ......+.+|+.++++++||||+++++++.. ..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~ 82 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQ 82 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cc
Confidence 356788899999999999999864 332 58999887654 3445678899999999999999999998874 46
Q ss_pred EEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.++++||+++|++. ..++++.|++.|++||| +++++||||||+||++++++.+||+|||+++.
T Consensus 83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 78889999988554 44579999999999999 89999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-25 Score=178.63 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=123.3
Q ss_pred HHhhhccccccceEeccCCcEEEEEEE-EcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec---c
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL---I 222 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~ 222 (312)
.+....++|.+.+.+|+|||+.||.++ ..+++.+|+|++.....+..+...+|++..++++|||+++++++.... .
T Consensus 15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 344567789999999999999999998 457788999999887777788899999999999999999999886422 2
Q ss_pred cccEEEEecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 223 LKPWYLSSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
....|++..|...|++.+ .+.|+.++++||++||+. .++..||||||.|||+.+.+.+++.||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEec
Confidence 345788888988886544 446999999999999954 446999999999999999999999999
Q ss_pred cchhhh
Q 036266 287 NISKLL 292 (312)
Q Consensus 287 G~a~~~ 292 (312)
|.++..
T Consensus 174 GS~~~a 179 (302)
T KOG2345|consen 174 GSATQA 179 (302)
T ss_pred cCcccc
Confidence 998774
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=189.80 Aligned_cols=151 Identities=23% Similarity=0.343 Sum_probs=126.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++||||+++++.+.. ....++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFI--EGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--CCeEEEEE
Confidence 35788889999999999999975 68889999987542 3344678899999999999999999998874 45678888
Q ss_pred cccCCCCHH---------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 231 CVMPNGDFP---------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~---------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
||++++++. ....++.|+++|+.|||+ +.+|+||||||+||+++.++.+|++|||+++.+
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999987553 335689999999999993 358999999999999999999999999987532
Q ss_pred -------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 778888888888874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=188.48 Aligned_cols=143 Identities=17% Similarity=0.273 Sum_probs=118.7
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeee--
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAI-- 220 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~-- 220 (312)
+..+....++|+..+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3455567889999999999999999999875 57889999886532 2235677899999999 69999999998742
Q ss_pred -cccccEEEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 221 -LILKPWYLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 221 -~~~~~~~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
......+++|||++++++.+. ..++.|+++|+.||| +.+|+||||||+||++++++.+|+
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEE
Confidence 234568999999999877543 248899999999999 889999999999999999999999
Q ss_pred ccccchhh
Q 036266 284 SDFNISKL 291 (312)
Q Consensus 284 ~DFG~a~~ 291 (312)
+|||+++.
T Consensus 166 ~dfg~~~~ 173 (286)
T cd06638 166 VDFGVSAQ 173 (286)
T ss_pred ccCCceee
Confidence 99998753
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-25 Score=190.93 Aligned_cols=149 Identities=18% Similarity=0.318 Sum_probs=126.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|.....||+|+||.||++... +++.||||.+........+.+.+|+.++++++||||+++++.+.. ....+++|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~~~lv~e~ 100 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDELWVVMEF 100 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCeEEEEEeC
Confidence 3444567999999999999864 578899999976555556778899999999999999999998873 4567888999
Q ss_pred cCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 233 MPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 233 ~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++++++. +...++.|++.|++||| +.+|+||||||+||++++++.+||+|||++...
T Consensus 101 ~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 177 (292)
T cd06658 101 LEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS 177 (292)
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCce
Confidence 9988654 34579999999999999 889999999999999999999999999987531
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 178 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 219 (292)
T cd06658 178 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYF 219 (292)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888999999998874
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=187.75 Aligned_cols=126 Identities=19% Similarity=0.194 Sum_probs=103.7
Q ss_pred EeccCCcEEEEEEEEcC-------------------------CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeee
Q 036266 160 LLGTESLGSVYKWIFLD-------------------------ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKI 214 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 214 (312)
.||+|+||.||+|.... ...||+|.+..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999987421 12489999976555555678889999999999999999
Q ss_pred eeeeeecccccEEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC--
Q 036266 215 LTTIAILILKPWYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-- 279 (312)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-- 279 (312)
++++.. ....+++|||+++|++. .+++++.|+++|++||| +++|+||||||+||++++.+
T Consensus 82 ~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVR--GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEe--CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcc
Confidence 999874 44568889999988553 34569999999999999 88999999999999997543
Q ss_pred -----ceEEccccchh
Q 036266 280 -----VAHVSDFNISK 290 (312)
Q Consensus 280 -----~~kl~DFG~a~ 290 (312)
.+|++|||++.
T Consensus 157 ~~~~~~~kl~d~g~~~ 172 (274)
T cd05076 157 EGTSPFIKLSDPGVSF 172 (274)
T ss_pred cCccceeeecCCcccc
Confidence 47999999764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=190.22 Aligned_cols=137 Identities=26% Similarity=0.386 Sum_probs=114.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIA 219 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 219 (312)
...++|...+.+|+|+||.||+|+.. ++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34567888899999999999999741 23469999987543 34456788999999999 7999999999887
Q ss_pred ecccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 220 ILILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
. ....+++|||+++|++.+ ++.++.|+++|++||| +.+|+||||||+
T Consensus 92 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~ 166 (304)
T cd05101 92 Q--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAAR 166 (304)
T ss_pred c--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccc
Confidence 4 456788899999886544 3457899999999999 899999999999
Q ss_pred CeeeCCCCceEEccccchhh
Q 036266 272 NNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++++.+||+|||+++.
T Consensus 167 Nili~~~~~~kl~D~g~~~~ 186 (304)
T cd05101 167 NVLVTENNVMKIADFGLARD 186 (304)
T ss_pred eEEEcCCCcEEECCCcccee
Confidence 99999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=184.86 Aligned_cols=150 Identities=24% Similarity=0.363 Sum_probs=128.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.+|+|++|.||+|... +++.||+|.++... ....+.+.+|++++++++|+|++++++++.. ....++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~~~~~l 79 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE--NNELNI 79 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeEEE
Confidence 46888899999999999999976 78899999886422 2335678899999999999999999999874 356788
Q ss_pred EecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||+++|++.. .+.++.|+++|++||| +.+|+||||||+||+++.++.++++|||+++.+
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 899999887643 3468999999999999 899999999999999999999999999986532
Q ss_pred ------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 157 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 207 (267)
T cd08224 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred cCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcc
Confidence 888899999988873
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-25 Score=214.36 Aligned_cols=139 Identities=21% Similarity=0.338 Sum_probs=112.5
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc-----
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----- 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 222 (312)
....+|+..+.+|+||||.||+++.+ ||+.||||+|.... ......+.+|+.++++++|||||+++..+....
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45678889999999999999999976 89999999998653 344566889999999999999999875331100
Q ss_pred --------------------------------------------------------------------------------
Q 036266 223 -------------------------------------------------------------------------------- 222 (312)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (312)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------c--------ccEEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhC
Q 036266 223 ------------------------L--------KPWYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHH 257 (312)
Q Consensus 223 ------------------------~--------~~~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~ 257 (312)
. ..+|+.||||+...|.+ ..+++++|+.||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH- 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH- 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH-
Confidence 0 12455566665543332 2369999999999999
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 258 ~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++||||||||.||++|.+..+||+|||+|+.
T Consensus 715 --~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 715 --DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD 746 (1351)
T ss_pred --hCceeeccCCcceeEEcCCCCeeecccccchh
Confidence 89999999999999999999999999999998
|
|
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=190.25 Aligned_cols=134 Identities=26% Similarity=0.398 Sum_probs=112.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
.++|.+.+.||+|+||.||++... +...+|+|.++... ......+.+|+++++++ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 357889999999999999999752 12469999997543 34456788899999999 79999999999874
Q ss_pred ccccEEEEecccCCCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 222 ILKPWYLSSCVMPNGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
....+++|||+++|++. +.++++.|++.||+||| +++++||||||+||
T Consensus 96 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 171 (307)
T cd05098 96 -DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 171 (307)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHhe
Confidence 34678889999887543 34568999999999999 89999999999999
Q ss_pred eeCCCCceEEccccchh
Q 036266 274 LLDEDMVAHVSDFNISK 290 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~ 290 (312)
++++++.+||+|||.++
T Consensus 172 ll~~~~~~kL~dfg~a~ 188 (307)
T cd05098 172 LVTEDNVMKIADFGLAR 188 (307)
T ss_pred EEcCCCcEEECCCcccc
Confidence 99999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=185.87 Aligned_cols=149 Identities=26% Similarity=0.380 Sum_probs=124.1
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
|.....+|+|++|.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.. ..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--AD 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--CC
Confidence 567789999999999999864 57889999886432 1223567889999999999999999999874 44
Q ss_pred cEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..++++||++++++.+ ...++.|++.|++||| +.+++||||||+||++++++.+||+|||.++..
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 6678888999886543 3468999999999999 889999999999999999999999999964321
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 8889999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=185.20 Aligned_cols=143 Identities=26% Similarity=0.422 Sum_probs=119.8
Q ss_pred EeccCCcEEEEEEEEc---CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 160 LLGTESLGSVYKWIFL---DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.+|+|+||.||+|.++ +++.+|+|+++... ....+.+.+|+.++++++||||+++++++.. ...+++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEecCC
Confidence 5899999999999753 46779999987543 3345678899999999999999999998752 34578889999
Q ss_pred CCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 235 NGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 235 ~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
+|++.+ ..+++.|++.|++|+| +++|+||||||+||++++++.+||+|||+++..
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 886543 4579999999999999 899999999999999999999999999987532
Q ss_pred -----------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -----------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+..
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 201 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG 201 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 888999997 8888764
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=184.29 Aligned_cols=150 Identities=29% Similarity=0.432 Sum_probs=125.1
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
..+|+..+.+|+|++|.||++.. .++.||+|.++... ..+.+.+|+.++++++|+|++++++++.. .....++++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~lv~e 80 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE-EKGGLYIVTE 80 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEc-CCCceEEEEE
Confidence 45788889999999999999976 47789999987543 34568899999999999999999987643 3345788899
Q ss_pred ccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|++++++. ..++++.|++.|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 99987554 34578999999999999 889999999999999999999999999987742
Q ss_pred ----------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ----------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|++.
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~ 202 (256)
T cd05082 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202 (256)
T ss_pred CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 778888886 7777653
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=187.62 Aligned_cols=136 Identities=22% Similarity=0.319 Sum_probs=116.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..|+..+.+|+|+||.||+|... +++.+|||.+...... ..+.+.+|++++++++||||+++++++........
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677789999999999999853 2567999999765432 45778999999999999999999998876566678
Q ss_pred EEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++|||++++++.+ +..++.|++.||+||| +.+++||||||+||+++.++.+|++|||.+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 89999999876543 4569999999999999 88999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=185.10 Aligned_cols=127 Identities=20% Similarity=0.264 Sum_probs=104.9
Q ss_pred EeccCCcEEEEEEEEcC-------------CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 160 LLGTESLGSVYKWIFLD-------------ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+|+||.||+|...+ ...||+|.+..........+.+|+.+++.++||||+++++++.. ....
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--~~~~ 79 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR--DVEN 79 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec--CCCC
Confidence 58999999999998532 12489999876555556678889999999999999999999874 3456
Q ss_pred EEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc-------eEEccc
Q 036266 227 YLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV-------AHVSDF 286 (312)
Q Consensus 227 ~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~-------~kl~DF 286 (312)
+++|||+++|++ ...++++.|+++|++||| +++|+||||||+||+++.++. +|++||
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 788889988744 344579999999999999 899999999999999986654 899999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|++..
T Consensus 157 g~~~~ 161 (262)
T cd05077 157 GIPIT 161 (262)
T ss_pred CCCcc
Confidence 98754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-26 Score=219.56 Aligned_cols=155 Identities=23% Similarity=0.336 Sum_probs=131.1
Q ss_pred hhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..+-+++....||.|.||.||.|.. .+|...|||-++.+. ....+...+|..++..++|||+|+++|+-...+ ..
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe--kv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE--KV 1309 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH--HH
Confidence 3455677788999999999999995 467789999987644 344566789999999999999999999866443 45
Q ss_pred EEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++-||||++|++.+.. .+..|++.|++||| +.+||||||||+||++|.+|.+|.+|||.|..+
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecC
Confidence 6667799999887654 37899999999999 899999999999999999999999999999875
Q ss_pred -----------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++..||+||+.||.++
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~ 1444 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAEL 1444 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhc
Confidence 88888999999998764
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=185.08 Aligned_cols=134 Identities=25% Similarity=0.439 Sum_probs=113.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CC---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DE---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.+|+|++|.||+|... ++ ..+|+|.++... ....+.+..|++++++++|||++++.+++.. ....
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 81 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK--FKPA 81 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc--CCCc
Confidence 346788899999999999999975 33 369999987543 3345678899999999999999999999874 4457
Q ss_pred EEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|||++++++. +...++.|++.|++||| +.+++||||||+||++++++.+|++|||+++
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 155 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSR 155 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccce
Confidence 8888999887553 44579999999999999 8899999999999999999999999999775
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-24 Score=185.46 Aligned_cols=133 Identities=25% Similarity=0.377 Sum_probs=112.6
Q ss_pred cccccceEeccCCcEEEEEEEEcC-C---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD-E---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..|+..+.+|+|+||.||+|.... + ..||||.++... ......+..|+.++++++||||+++++++. .....+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~--~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT--KSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC--CCCceE
Confidence 357788999999999999999653 3 359999987542 444577899999999999999999999876 445578
Q ss_pred EEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 228 LSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++|||++++++. +.+.++.|++.|++||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~ 154 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCcccc
Confidence 888999887553 44578999999999999 8999999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=195.80 Aligned_cols=130 Identities=17% Similarity=0.189 Sum_probs=109.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+|...+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++... ...+++
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 135 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSG--AITCMV 135 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeC--CeeEEE
Confidence 3457999999999999999999975 4678999975432 234689999999999999999998744 446677
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++.+. ++.++.+++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 136 ~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~ 206 (357)
T PHA03209 136 LPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQF 206 (357)
T ss_pred EEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccc
Confidence 7777543 45566789999999999999 88999999999999999999999999999864
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=187.88 Aligned_cols=133 Identities=25% Similarity=0.367 Sum_probs=113.1
Q ss_pred cccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++...+.+|+|+||.||++... ++..+|+|.+..........+.+|++++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 82 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTE--GRPL 82 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEec--CCce
Confidence 45777889999999999999742 345699999876555666789999999999999999999998874 4457
Q ss_pred EEEecccCCCCH---------------------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC
Q 036266 227 YLSSCVMPNGDF---------------------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM 279 (312)
Q Consensus 227 ~l~~~~~~~g~~---------------------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~ 279 (312)
++++||++++++ ..++.++.|++.|++||| +.+++||||||+||++++++
T Consensus 83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCC
Confidence 888889987754 344578899999999999 89999999999999999999
Q ss_pred ceEEccccchh
Q 036266 280 VAHVSDFNISK 290 (312)
Q Consensus 280 ~~kl~DFG~a~ 290 (312)
.+||+|||+++
T Consensus 160 ~~kL~dfg~~~ 170 (280)
T cd05092 160 VVKIGDFGMSR 170 (280)
T ss_pred CEEECCCCcee
Confidence 99999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=188.99 Aligned_cols=135 Identities=22% Similarity=0.329 Sum_probs=113.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-----------------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-----------------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 213 (312)
.++|+..+.+|+|+||.||++... +...||+|.+.... ......+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 356888999999999999998532 13358999997543 344567889999999999999999
Q ss_pred eeeeeeecccccEEEEecccCCCCHH-----------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCC
Q 036266 214 ILTTIAILILKPWYLSSCVMPNGDFP-----------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKP 270 (312)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~g~~~-----------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp 270 (312)
+++++.. ....+++|||+++|++. +...++.|++.|++||| +.+++||||||
T Consensus 84 ~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp 158 (296)
T cd05095 84 LLAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLAT 158 (296)
T ss_pred EEEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCh
Confidence 9999874 34578888999988664 34578999999999999 88999999999
Q ss_pred CCeeeCCCCceEEccccchhh
Q 036266 271 SNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~ 291 (312)
+||+++.++.+|++|||+++.
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05095 159 RNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred heEEEcCCCCEEeccCccccc
Confidence 999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=190.32 Aligned_cols=135 Identities=22% Similarity=0.262 Sum_probs=113.4
Q ss_pred ccccceEeccCCcEEEEEEEEc---CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL---DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.|+..+.+|+|++|.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.......++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677889999999999999975 36789999998632 33345678899999999999999999999866556789
Q ss_pred EEecccCCCC----------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC----CCceEEcccc
Q 036266 228 LSSCVMPNGD----------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE----DMVAHVSDFN 287 (312)
Q Consensus 228 l~~~~~~~g~----------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~----~~~~kl~DFG 287 (312)
++|||+++.. ......++.|++.|++||| +.+|+||||||+||+++. ++.+|++|||
T Consensus 81 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred EEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 9999987531 2234469999999999999 889999999999999998 9999999999
Q ss_pred chhh
Q 036266 288 ISKL 291 (312)
Q Consensus 288 ~a~~ 291 (312)
+++.
T Consensus 158 ~~~~ 161 (316)
T cd07842 158 LARL 161 (316)
T ss_pred cccc
Confidence 8664
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=187.68 Aligned_cols=133 Identities=22% Similarity=0.321 Sum_probs=114.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.+|+|+||.||++... +++.||+|.+.... ......+.+|+++++.++||||+++++.+. .....++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~l 78 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--TKRHLCM 78 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe--cCCEEEE
Confidence 36788899999999999999975 57789999997653 233456788999999999999999999887 3456889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||++++++.+. ..++.|+++|++|+| +.+++||||||+||+++.++.+|++|||+++
T Consensus 79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~ 149 (305)
T cd05609 79 VMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSK 149 (305)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCcc
Confidence 9999999876543 358899999999999 8899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-24 Score=188.53 Aligned_cols=135 Identities=27% Similarity=0.390 Sum_probs=114.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|+..+.+|+|+||.||+|... ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV--G 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC--C
Confidence 3467888999999999999999853 35679999987543 3345678899999999999999999998874 4
Q ss_pred ccEEEEecccCCCCHHHH----------------------------------HHHHHHHHHHHHHHhCCCCCCceecCCC
Q 036266 224 KPWYLSSCVMPNGDFPER----------------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLK 269 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~----------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlk 269 (312)
...++++||+++|++.+. +.++.|++.||+||| ..+++|||||
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~ 157 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLA 157 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeeccccc
Confidence 457888889998866443 469999999999999 8899999999
Q ss_pred CCCeeeCCCCceEEccccchh
Q 036266 270 PSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 270 p~Nill~~~~~~kl~DFG~a~ 290 (312)
|+||++++++.+|++|||+++
T Consensus 158 p~nil~~~~~~~~l~dfg~~~ 178 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSR 178 (288)
T ss_pred HhheEecCCCceEECccccce
Confidence 999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=193.13 Aligned_cols=154 Identities=22% Similarity=0.293 Sum_probs=127.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.+|+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.... .
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4567999999999999999999965 68899999986432 334456778999999999999999999875332 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
...+++|||+++. +..+...++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 170 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 170 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence 3578999999753 23344568999999999999 889999999999999999999999999988642
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 888899999988875
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-24 Score=186.10 Aligned_cols=152 Identities=23% Similarity=0.343 Sum_probs=130.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..|+..+.+|+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.. ....+++|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--GTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCEEEEEE
Confidence 35677789999999999999975 57889999987543 3445678899999999999999999999874 45688999
Q ss_pred cccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
||+++|++.+.+ .++.|++.|++|+| +.+++|+||+|+||+++.++.++++|||++...
T Consensus 82 e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06640 82 EYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred ecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc
Confidence 999999766543 58899999999999 899999999999999999999999999987442
Q ss_pred -----------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|++||+.|+.+.
T Consensus 159 ~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 204 (277)
T cd06640 159 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 204 (277)
T ss_pred ccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 88999999999997653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=188.86 Aligned_cols=136 Identities=20% Similarity=0.257 Sum_probs=115.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|++|.||+|... +++.+|+|.++... ......+.+|+.++++++||||+++++++........+++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888899999999999999975 57889999997543 2223356789999999999999999999876555778999
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+||+++. ++.+...++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceee
Confidence 9998742 34556679999999999999 88999999999999999999999999997664
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=189.15 Aligned_cols=135 Identities=23% Similarity=0.349 Sum_probs=113.0
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-------------C--cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-------------E--TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKIL 215 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-------------~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~ 215 (312)
..+|+..+.||+|+||.||+|.... + ..||+|.++... ......+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578888999999999999987532 1 248999987643 33445688999999999999999999
Q ss_pred eeeeecccccEEEEecccCCCCHHH------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 216 TTIAILILKPWYLSSCVMPNGDFPE------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~g~~~~------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
+++.. ....+++|||++++++.+ .++++.|++.|++||| +.+++||||||+
T Consensus 84 ~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~ 158 (295)
T cd05097 84 GVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATR 158 (295)
T ss_pred EEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChh
Confidence 99873 456788999999875533 3568999999999999 899999999999
Q ss_pred CeeeCCCCceEEccccchhh
Q 036266 272 NNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++++.+||+|||+++.
T Consensus 159 Nill~~~~~~kl~dfg~~~~ 178 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRN 178 (295)
T ss_pred hEEEcCCCcEEecccccccc
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=190.23 Aligned_cols=126 Identities=19% Similarity=0.245 Sum_probs=105.9
Q ss_pred ceEeccC--CcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 158 WHLLGTE--SLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 158 ~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+.||+| +|++||++... +++.||+|.++... ....+.+.+|+++++.++||||+++++++... ...++++||
T Consensus 3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~lv~e~ 80 (327)
T cd08227 3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELWVVTSF 80 (327)
T ss_pred hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEEEEEec
Confidence 4678999 67899999864 68889999997643 33445677899999999999999999998743 457888899
Q ss_pred cCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 233 MPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 233 ~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
+++|++. ....++.|++.||+||| +.+|+||||||+||+++.++.++++||+.
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~ 147 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRS 147 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccch
Confidence 9987553 34469999999999999 88999999999999999999999999863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-24 Score=188.11 Aligned_cols=150 Identities=23% Similarity=0.328 Sum_probs=127.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++||||+++++++. .....++++|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL--KGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc--cCCceEEEEE
Confidence 4566678999999999999865 57789999987543 344567889999999999999999999887 3456788999
Q ss_pred ccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 232 VMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 232 ~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
|++++++.+ ...++.|+++|+.||| +.+++|+||||+||++++++.+|++|||+++.+
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06642 83 YLGGGSALDLLKPGPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred ccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence 999886544 3468999999999999 899999999999999999999999999987542
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+.+
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 8899999999998754
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=186.99 Aligned_cols=144 Identities=20% Similarity=0.273 Sum_probs=119.6
Q ss_pred hHHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
.+.++..+.++|+..+.+|+|+||.||++... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 34555667889999999999999999999974 57889999986532 2235577899999988 799999999988643
Q ss_pred c---cccEEEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceE
Q 036266 222 I---LKPWYLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAH 282 (312)
Q Consensus 222 ~---~~~~~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~k 282 (312)
+ ....++++||++++++.+. ..++.|++.|++||| +.+++||||||+||++++++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEE
Confidence 3 2457899999998866442 358999999999999 88999999999999999999999
Q ss_pred Eccccchhh
Q 036266 283 VSDFNISKL 291 (312)
Q Consensus 283 l~DFG~a~~ 291 (312)
|+|||+++.
T Consensus 169 l~dfg~~~~ 177 (291)
T cd06639 169 LVDFGVSAQ 177 (291)
T ss_pred Eeecccchh
Confidence 999998664
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=191.92 Aligned_cols=135 Identities=24% Similarity=0.376 Sum_probs=112.5
Q ss_pred ccccccceEeccCCcEEEEEEEEcC--------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD--------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
..+|++.+.||+|+||.||+|.... ...||+|.++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 3468889999999999999997421 2358999887543 34456788999999999 79999999999874
Q ss_pred ccccEEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 222 ILKPWYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
....++++||+++|++.+. +.++.|++.|++||| .++|+||||||+||
T Consensus 90 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Ni 165 (334)
T cd05100 90 -DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNV 165 (334)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceE
Confidence 3467888899998866543 347899999999999 89999999999999
Q ss_pred eeCCCCceEEccccchhh
Q 036266 274 LLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~~ 291 (312)
++++++.+||+|||+++.
T Consensus 166 ll~~~~~~kL~Dfg~~~~ 183 (334)
T cd05100 166 LVTEDNVMKIADFGLARD 183 (334)
T ss_pred EEcCCCcEEECCccccee
Confidence 999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=189.40 Aligned_cols=134 Identities=25% Similarity=0.394 Sum_probs=112.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
.++|...+.+|+|+||.||+|... ....+|+|.++... ......+..|+++++++ +||||+++++++..
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 457888999999999999999742 23469999987543 33456688899999999 69999999998863
Q ss_pred ccccEEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 222 ILKPWYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
....++++||+++|++.+. ++++.|++.|++||| +.+|+||||||+||
T Consensus 90 -~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 165 (314)
T cd05099 90 -EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNV 165 (314)
T ss_pred -CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeE
Confidence 4567888999998866543 357899999999999 89999999999999
Q ss_pred eeCCCCceEEccccchh
Q 036266 274 LLDEDMVAHVSDFNISK 290 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~ 290 (312)
++++++.+|++|||+++
T Consensus 166 ll~~~~~~kL~Dfg~~~ 182 (314)
T cd05099 166 LVTEDNVMKIADFGLAR 182 (314)
T ss_pred EEcCCCcEEEccccccc
Confidence 99999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.4e-25 Score=194.30 Aligned_cols=130 Identities=23% Similarity=0.429 Sum_probs=106.9
Q ss_pred ceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 158 WHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.+.+|+|.||+||-|+++ +|+.||||+|++.. .+...++.+|+.+|++++||.||.+.-.|+..+. ++.+||-+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er--vFVVMEKl~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER--VFVVMEKLH 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce--EEEEehhhc
Confidence 468999999999999965 79999999998744 3344678899999999999999999888875554 566666765
Q ss_pred CC-----------CHHHHH--HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEccccchhhh
Q 036266 235 NG-----------DFPERL--NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSDFNISKLL 292 (312)
Q Consensus 235 ~g-----------~~~~~~--~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~DFG~a~~~ 292 (312)
+. .+++|+ -++.||+.||.||| .++|+|+||||+|||+... -.+||+|||+|+++
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 43 334443 37899999999999 8999999999999999632 37999999999997
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=192.34 Aligned_cols=154 Identities=21% Similarity=0.322 Sum_probs=126.7
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---cccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~~ 226 (312)
.++|+..+.+|+|++|.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.... ....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 467899999999999999999864 68889999986422 334456788999999999999999998865432 2357
Q ss_pred EEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 227 YLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 227 ~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
++++||+++. ++.....++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 8888998752 33445579999999999999 899999999999999999999999999987431
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+++
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~ 212 (336)
T cd07849 161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG 212 (336)
T ss_pred cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8888899999888753
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=188.97 Aligned_cols=136 Identities=20% Similarity=0.308 Sum_probs=113.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
..++|...+.+|+|+||.||++... ++..||+|.++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 3457888999999999999999742 23469999987543 33446788999999999 79999999998874
Q ss_pred cccEEEEecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 223 LKPWYLSSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
....+++|||+++|++. +...++.|++.|++||| +.+|+||||||+||++++++.+|++|||+
T Consensus 111 ~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 111 GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 44578888999887554 34568999999999999 88999999999999999999999999998
Q ss_pred hhh
Q 036266 289 SKL 291 (312)
Q Consensus 289 a~~ 291 (312)
++.
T Consensus 188 ~~~ 190 (302)
T cd05055 188 ARD 190 (302)
T ss_pred ccc
Confidence 763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-24 Score=184.31 Aligned_cols=147 Identities=30% Similarity=0.480 Sum_probs=124.3
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
++|+..+.+|+|+||.||++.. +++.||+|.++... ....+.+|+.++++++|||++++++++... ..+++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---~~~~v~e~ 79 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN---GLYIVMEL 79 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---CcEEEEEC
Confidence 5688899999999999999874 67789999987543 235688999999999999999999987632 35788899
Q ss_pred cCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 233 MPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 233 ~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
++++++.+ ++.++.|++.|+.|+| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~ 156 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN 156 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCC
Confidence 99886543 3468999999999999 899999999999999999999999999987642
Q ss_pred ---------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+++
T Consensus 157 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 200 (254)
T cd05083 157 SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPK 200 (254)
T ss_pred CCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 888899887 8888754
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-24 Score=186.05 Aligned_cols=150 Identities=22% Similarity=0.337 Sum_probs=126.1
Q ss_pred cccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|++|.||+|.. .+++.+|||.+.... ......+.+|+++++.++||||+++++++.. ....++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~ 79 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNELNI 79 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--CCeEEE
Confidence 4677888999999999999996 478899999886432 3344678899999999999999999998874 345678
Q ss_pred EecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||++++++.+ .++++.|++.|++||| +.+++|+||||+||+++.++.++++|||++..+
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 888998875543 3468999999999999 899999999999999999999999999976542
Q ss_pred ------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 207 (267)
T cd08229 157 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred ccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence 888999999988874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=188.70 Aligned_cols=150 Identities=25% Similarity=0.342 Sum_probs=126.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.+|+|++|.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR--RKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc--cCCeEEEE
Confidence 35788899999999999999975 57889999986532 223456788999999999999999999986 45567899
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+||++++ ++.+...++.|+++|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 9999876 34556679999999999999 889999999999999999999999999986531
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence 788888888887764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=182.71 Aligned_cols=150 Identities=28% Similarity=0.419 Sum_probs=126.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
+|+..+.+|+|++|.||+|... +++.||+|.+.... .+..+.+.+|++++++++|+||+++++++. .....+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~ 78 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER--EEDNLY 78 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe--cCCeEE
Confidence 3667789999999999999976 68889999986533 234567889999999999999999999876 445678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+++||++++++.+ ...++.|+++|++||| +.+++|+||||+||+++.++.+||+|||.+...
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 79 IFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 8889999876543 3468999999999999 889999999999999999999999999976531
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 156 SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 8888999999998754
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-25 Score=200.13 Aligned_cols=135 Identities=23% Similarity=0.295 Sum_probs=115.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh---hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ---LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.-|...+.||.|+||.||-|++. +...||||++.-. ..+.+.++..|++.|++++|||+|.+-|+|. .....|+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL--re~TaWL 103 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL--REHTAWL 103 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee--ccchHHH
Confidence 45677889999999999999964 5678999998643 3556788999999999999999999999987 4456788
Q ss_pred EecccCCC--CHHH----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNG--DFPE----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g--~~~~----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|||||-|. |+-+ ...|..+.++||+||| +.+.||||||..|||+++.|.+|++|||.|.+.
T Consensus 104 VMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 104 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhc
Confidence 99999764 3322 2358999999999999 899999999999999999999999999999885
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-24 Score=185.77 Aligned_cols=135 Identities=24% Similarity=0.384 Sum_probs=111.8
Q ss_pred hccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|...+.+|+|++|.||+|.+.. +..||+|.+.... ......+.+|+.++++++|+||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER-- 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--
Confidence 45678889999999999999998753 4569999886543 33445688999999999999999999987643
Q ss_pred ccEEEEecccCCCCHHH-------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC---ce
Q 036266 224 KPWYLSSCVMPNGDFPE-------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM---VA 281 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~-------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~---~~ 281 (312)
...+++|||++++++.+ .++++.||+.|++||| +.+++||||||+||+++.++ .+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcce
Confidence 45678888998876544 3469999999999999 88999999999999998654 59
Q ss_pred EEccccchh
Q 036266 282 HVSDFNISK 290 (312)
Q Consensus 282 kl~DFG~a~ 290 (312)
|++|||+++
T Consensus 159 kl~dfg~~~ 167 (277)
T cd05036 159 KIADFGMAR 167 (277)
T ss_pred EeccCcccc
Confidence 999999875
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=189.96 Aligned_cols=149 Identities=19% Similarity=0.306 Sum_probs=125.5
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|.....+|+|+||.||++... +++.||+|.++.......+.+.+|+.+++.++|||++++++++.. ....++++||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~iv~e~ 99 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GEELWVLMEF 99 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheee--CCeEEEEEec
Confidence 3455668999999999999864 688899999976544445668899999999999999999998874 4567888889
Q ss_pred cCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 233 MPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 233 ~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++++++. +...++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 100 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~ 176 (297)
T cd06659 100 LQGGALTDIVSQTRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS 176 (297)
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence 9988554 34569999999999999 889999999999999999999999999987532
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 788888888888863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=184.48 Aligned_cols=150 Identities=27% Similarity=0.400 Sum_probs=128.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
+|+..+.+|.|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++.+. .....+++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ--DEENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc--CCCeEEEE
Confidence 4778899999999999999975 58889999997643 234567889999999999999999998886 44567888
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+||++++++... ..++.|+++|+.||| +.+++|+||||+||++++++.++++|||.+...
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc
Confidence 899998866543 468999999999999 889999999999999999999999999987542
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 201 (258)
T cd05578 156 TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG 201 (258)
T ss_pred ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCC
Confidence 8889999999999764
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.4e-24 Score=188.13 Aligned_cols=139 Identities=22% Similarity=0.292 Sum_probs=117.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---- 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 222 (312)
...++|+..+.+|+|++|.||+|... +++.||+|.++... ......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35567889999999999999999975 57889999997543 223345678999999999999999999876433
Q ss_pred ----cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 223 ----LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 223 ----~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
...+++++||++++ ++.+...++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 84 ~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~df 160 (302)
T cd07864 84 FKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADF 160 (302)
T ss_pred ccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcc
Confidence 23688999998763 56677789999999999999 889999999999999999999999999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|+++.
T Consensus 161 g~~~~ 165 (302)
T cd07864 161 GLARL 165 (302)
T ss_pred ccccc
Confidence 98763
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.8e-24 Score=182.14 Aligned_cols=150 Identities=23% Similarity=0.299 Sum_probs=127.1
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|+||.||.++.. +++.+++|.+.... ....+.+.+|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD--DNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CCeEEEEE
Confidence 4778899999999999998854 57889999987542 3445678899999999999999999999874 45678889
Q ss_pred cccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+ ...++.|+++|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999886554 3468899999999999 889999999999999999999999999976532
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|++.
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 8888999999888754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-24 Score=183.80 Aligned_cols=127 Identities=23% Similarity=0.383 Sum_probs=108.4
Q ss_pred eEeccCCcEEEEEEEEcC--Cc--EEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLD--ET--NVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.+|+|++|.||+|.+.+ ++ .||+|.+..... ...+.+.+|++++++++||||+++++.+.. ...++++||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEEec
Confidence 368999999999998643 32 599999987654 566788999999999999999999998874 5678888999
Q ss_pred CCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 234 PNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 234 ~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++++.+ ...++.|++.||+||| +.+++||||||+||+++.++.+|++|||+++.
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~ 146 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRA 146 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecccccccc
Confidence 8875543 3468899999999999 89999999999999999999999999997653
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-24 Score=185.57 Aligned_cols=137 Identities=21% Similarity=0.331 Sum_probs=113.5
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
..++|...+.||+|+||.||+|.... +..||+|.+.... ......+.+|+.++++++||||+++++++... ..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~ 82 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GE 82 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CC
Confidence 34678888999999999999999765 5779999987543 34456688999999999999999999987543 34
Q ss_pred cEEEEecccCCCCH--------------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc
Q 036266 225 PWYLSSCVMPNGDF--------------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 225 ~~~l~~~~~~~g~~--------------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~ 284 (312)
..+++++|+++|++ .+.+.++.|++.|++||| +.+++||||||+||++++++.+|++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEEC
Confidence 45677778776644 344568999999999999 8999999999999999999999999
Q ss_pred cccchhh
Q 036266 285 DFNISKL 291 (312)
Q Consensus 285 DFG~a~~ 291 (312)
|||+++.
T Consensus 160 d~g~~~~ 166 (280)
T cd05043 160 DNALSRD 166 (280)
T ss_pred CCCCccc
Confidence 9999863
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=181.54 Aligned_cols=150 Identities=27% Similarity=0.358 Sum_probs=129.5
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|+..+.+|+|++|.||+|...+ ++.+|+|.+..... .+++.+|++++++++||||+++++++.. ....++++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~ 77 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFK--NTDLWIVM 77 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeec--CCcEEEEE
Confidence 3578888999999999999999764 78899999976533 5788999999999999999999998874 46678889
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||++++++.+ ...++.|++.|+.||| ..+++||||+|+||++++++.+||+|||++...
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 9999875543 4469999999999999 889999999999999999999999999987642
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~ 201 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.8e-24 Score=186.86 Aligned_cols=152 Identities=24% Similarity=0.268 Sum_probs=127.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
....|+..+.+|+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++.+++.. ....
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~~~~ 90 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR--EHTA 90 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--CCeE
Confidence 4456888899999999999999965 57889999986432 3344668899999999999999999999874 4457
Q ss_pred EEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++++||+++. ++.+...++.|++.|+.||| +.+|+||||+|+||++++++.+||+|||+++..
T Consensus 91 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 91 WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 8888898753 34555679999999999999 889999999999999999999999999977432
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|+.
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 888899999998864
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-25 Score=202.74 Aligned_cols=133 Identities=27% Similarity=0.406 Sum_probs=117.7
Q ss_pred cccceEeccCCcEEEEEEEEcC-C---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 155 FNEWHLLGTESLGSVYKWIFLD-E---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..+.+.||.|.||.||+|+++- + ..||||.++... ++...+|..|+.+|.+++||||+++.|+.. ......++
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT--ks~PvMIi 708 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT--KSKPVMII 708 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe--cCceeEEE
Confidence 4667899999999999999752 3 349999998754 566788999999999999999999999876 55667888
Q ss_pred ecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 230 SCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.|||++|++.+.+ .+.++||.|+.||- +++.|||||-.+|||++.+..+|++|||++|.+
T Consensus 709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 781 (996)
T ss_pred hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeec
Confidence 9999999887765 38899999999999 999999999999999999999999999999875
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.2e-25 Score=196.92 Aligned_cols=135 Identities=18% Similarity=0.290 Sum_probs=114.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.-|..++.||-|+||.|..++-. +...||+|.+++.. .........|-.||...+.+-||++|-.|. +...+|+
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQ--DkdnLYF 706 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQ--DKDNLYF 706 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEec--cCCceEE
Confidence 34777889999999999998843 44569999998754 223344677889999999999999998888 6667899
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|+|+++||+...+ -++.++..|+++.| ..|.|||||||+|||||.+|.+||.|||+++-+
T Consensus 707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGf 779 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 779 (1034)
T ss_pred EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccc
Confidence 99999999987654 27889999999999 999999999999999999999999999998765
|
|
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-24 Score=181.79 Aligned_cols=155 Identities=23% Similarity=0.340 Sum_probs=129.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|.|++|.||++... +++.||+|.+.... ....+.+..|++++++++||||+++++++........++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4677889999999999999864 67889999987432 34456688899999999999999999988765666788999
Q ss_pred cccCCCCHH----------------HHHHHHHHHHHHHHHHhCCC--CCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 231 CVMPNGDFP----------------ERLNIMIDMALAFEYLHHGR--STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 231 ~~~~~g~~~----------------~~~~i~~~i~~~l~ylH~~~--~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
||++++++. ..+.++.|++.|++|+|..+ +.+++||||||+||++++++.+|++|||+++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999988654 33468999999999999543 678999999999999999999999999977652
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 8888999999888753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=180.70 Aligned_cols=151 Identities=23% Similarity=0.321 Sum_probs=125.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|||++++++.+.. ....+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG-EDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC-CCCEEEEEe
Confidence 4778899999999999999965 56789999997543 3345668889999999999999999887653 234578899
Q ss_pred cccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++.+ .+.++.|++.|++|+| +.+++||||||+||++++++.++|+|||+++..
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999886543 3579999999999999 899999999999999999999999999987532
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+++
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 204 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNA 204 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 8888888888888753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.5e-24 Score=183.51 Aligned_cols=144 Identities=28% Similarity=0.419 Sum_probs=118.5
Q ss_pred EeccCCcEEEEEEEEcC-Cc--EEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEecccC
Q 036266 160 LLGTESLGSVYKWIFLD-ET--NVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.+|+|+||.||+|...+ +. .+|+|.++... ....+.+.+|+++++++ +||||+++++++.. ....+++|||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec--CCCceEEEEeCC
Confidence 58999999999999753 43 47888887432 34456788999999999 79999999999874 345788888998
Q ss_pred CCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 235 NGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 235 ~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
+|++. +...++.|++.|++||| +.+++||||||+||++++++.+|++||
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCC
Confidence 77543 44678999999999999 899999999999999999999999999
Q ss_pred cchhh-----------------------------------hhhhhhhhhc-CCCCCcc
Q 036266 287 NISKL-----------------------------------LGVLLPETFT-RKKPTIE 308 (312)
Q Consensus 287 G~a~~-----------------------------------~g~~~~e~~t-g~~p~~e 308 (312)
|+++. +|++++|+++ |..|+.+
T Consensus 157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 214 (270)
T cd05047 157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 214 (270)
T ss_pred CCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 98741 1888888886 8888754
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-24 Score=183.08 Aligned_cols=151 Identities=23% Similarity=0.329 Sum_probs=127.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+-|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.. ....++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CCeEEEEE
Confidence 34677889999999999999864 57889999986433 3344678899999999999999999999874 45678899
Q ss_pred cccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
||++++++.+ ...++.|++.|+.||| +.+++|+||||+||+++.++.++++|||+++.+
T Consensus 82 e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06641 82 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 158 (277)
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh
Confidence 9999886544 4569999999999999 899999999999999999999999999977432
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+.+
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE 203 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 8889999999988754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-24 Score=187.93 Aligned_cols=134 Identities=27% Similarity=0.434 Sum_probs=110.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|+..+.||+|+||.||+|.+. ++. .||+|.+.... ......+.+|+.++++++||||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---~ 82 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---T 82 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---C
Confidence 356778889999999999999864 343 47899887543 23344688999999999999999999988632 3
Q ss_pred EEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.+++++|+++|++. ..+.++.|++.||+||| +++|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccc
Confidence 46778899988543 44578999999999999 89999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-24 Score=186.68 Aligned_cols=132 Identities=26% Similarity=0.310 Sum_probs=111.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-----HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-----RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
+|+..+.+|+|++|.||+|... +++.||||.++.... .....+..|++++++++|+||+++++++.. ....+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~ 78 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH--KSNIN 78 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec--CCEEE
Confidence 3677789999999999999965 588999999976432 123456789999999999999999999874 55678
Q ss_pred EEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|||+ +|++ .+..+++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~ 151 (298)
T cd07841 79 LVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARS 151 (298)
T ss_pred EEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeee
Confidence 899999 6644 344579999999999999 88999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=184.69 Aligned_cols=149 Identities=21% Similarity=0.301 Sum_probs=124.6
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.+|+|++|.||+|+.. +++.||||.++... ......+.+|++++++++||||+++++++... ...+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcEEEEEe
Confidence 4778899999999999999975 57889999997643 22345567899999999999999999998743 45688888
Q ss_pred ccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|+++. ++.+...++.|++.|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 79 YMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred cCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 88752 34455679999999999999 889999999999999999999999999987531
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 778888888888764
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.6e-24 Score=183.35 Aligned_cols=134 Identities=19% Similarity=0.378 Sum_probs=112.3
Q ss_pred ccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..+|...+.+|+|+||.||+|.+.+ ...||||...... ....+.+.+|+.++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~~ 81 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NPV 81 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CCc
Confidence 3457788999999999999998643 2459999987654 4455678999999999999999999998763 335
Q ss_pred EEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++|||+++|++.+ ++.++.|++.|++|+| +.+++||||||+||+++.++.+|++|||+++.
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~ 156 (270)
T cd05056 82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRY 156 (270)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeee
Confidence 78888998875543 4468999999999999 88999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-24 Score=186.06 Aligned_cols=153 Identities=20% Similarity=0.240 Sum_probs=129.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++... ...+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv 81 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NNICMC 81 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CEEEEE
Confidence 356788899999999999999965 57889999887543 34456788999999999999999999998743 567899
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+||++++++... ..++.+++.|+.|||+ ..+++||||||+||++++++.++|+|||++...
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~ 159 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA 159 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc
Confidence 999999876443 4689999999999993 258999999999999999999999999987531
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+..
T Consensus 160 ~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 160 DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF 204 (284)
T ss_pred CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 8899999999999863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=183.26 Aligned_cols=143 Identities=20% Similarity=0.265 Sum_probs=118.7
Q ss_pred hHHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
++.+.......|+..+.+|+|+||.||+|... +++.+|+|.+.... .....+..|+.+++++ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555567788999999999999999999974 57889999987643 2335678899999888 699999999987532
Q ss_pred ----ccccEEEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 222 ----ILKPWYLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 222 ----~~~~~~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
.....+++|||+++|++... ..++.|++.|++||| +.+|+||||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 24567899999998865443 357889999999999 889999999999999999999999
Q ss_pred ccccchh
Q 036266 284 SDFNISK 290 (312)
Q Consensus 284 ~DFG~a~ 290 (312)
+|||+++
T Consensus 163 ~dfg~~~ 169 (282)
T cd06636 163 VDFGVSA 169 (282)
T ss_pred eeCcchh
Confidence 9999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-24 Score=183.88 Aligned_cols=149 Identities=26% Similarity=0.328 Sum_probs=128.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.+|.|++|.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++.. ....++++|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--GSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE--CCeEEEEEE
Confidence 5778889999999999999965 57889999987643 3445668899999999999999999998874 356888999
Q ss_pred ccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 232 VMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 232 ~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
|++++++.+ ...++.|++.|+.||| +.+++||||+|+||++++++.++++|||+++..
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (274)
T cd06609 80 YCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN 156 (274)
T ss_pred eeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence 999886544 4569999999999999 889999999999999999999999999987542
Q ss_pred ----------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|+.
T Consensus 157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~ 199 (274)
T cd06609 157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLS 199 (274)
T ss_pred cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 888999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.7e-24 Score=184.61 Aligned_cols=150 Identities=21% Similarity=0.321 Sum_probs=123.1
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++. .....+++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 79 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH--SEKRLYLV 79 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe--cCCeEEEE
Confidence 46888999999999999999975 67889999986532 223456788999999999999999999987 34567888
Q ss_pred ecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchhhh---
Q 036266 230 SCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~~~--- 292 (312)
|||+++. +......++.|++.||+||| +++++||||||+||+++. ++.+|++|||+++..
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 8898643 22333468899999999999 889999999999999985 567999999987531
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||..|++
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 788888888888874
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.3e-24 Score=185.12 Aligned_cols=135 Identities=24% Similarity=0.326 Sum_probs=113.8
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-----------------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-----------------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 213 (312)
..+|+..+.+|+|+||.||+|.... +..||+|.+.... ......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999987542 2358999987643 344567889999999999999999
Q ss_pred eeeeeeecccccEEEEecccCCCCHH-----------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCC
Q 036266 214 ILTTIAILILKPWYLSSCVMPNGDFP-----------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKP 270 (312)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~g~~~-----------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp 270 (312)
+++++... ...++++|+++++++. ..+.++.|++.|++||| +.+|+||||||
T Consensus 84 ~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp 158 (296)
T cd05051 84 LLGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLAT 158 (296)
T ss_pred EEEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccch
Confidence 99998743 5678888898877543 34568999999999999 88999999999
Q ss_pred CCeeeCCCCceEEccccchhh
Q 036266 271 SNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~ 291 (312)
+||++++++.++++|||+++.
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred hceeecCCCceEEccccceee
Confidence 999999999999999998773
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.8e-24 Score=188.92 Aligned_cols=159 Identities=21% Similarity=0.317 Sum_probs=129.7
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
..++....++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 3455667789999999999999999999864 67889999997532 22345677899999999999999999887532
Q ss_pred c----cccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 222 I----LKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 222 ~----~~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
. ....+++++++ ++ ++.....++.|+++|++||| +.+|+||||||+||++++++.+||+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~df 164 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 164 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecc
Confidence 2 23456777765 33 34455679999999999999 889999999999999999999999999
Q ss_pred cchhhh----------------------------------hhhhhhhhcCCCCCc
Q 036266 287 NISKLL----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 287 G~a~~~----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|+++.. |++++|+++|+.|++
T Consensus 165 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 165 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred cccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 987542 888999999998875
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=182.34 Aligned_cols=134 Identities=28% Similarity=0.391 Sum_probs=109.2
Q ss_pred cccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc----c
Q 036266 155 FNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL----K 224 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~ 224 (312)
|...+.||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++..... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456678999999999999853 35779999987542 3345678899999999999999999998754321 2
Q ss_pred cEEEEecccCCCCHH------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 225 PWYLSSCVMPNGDFP------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
..+++++|+++|++. ...+++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 245667788877653 23569999999999999 889999999999999999999999999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|+++.
T Consensus 158 g~~~~ 162 (273)
T cd05074 158 GLSKK 162 (273)
T ss_pred ccccc
Confidence 98763
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-25 Score=179.22 Aligned_cols=151 Identities=25% Similarity=0.320 Sum_probs=121.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+.+....+|.|+.|.||+++++ +|...|||.+.... .+..+++...+.++.+- +.|.||+.+|+|.......++|+
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe- 171 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME- 171 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH-
Confidence 4455668899999999999976 57889999998654 44456667777766554 48999999999986655555544
Q ss_pred cccC----------CCCHHHHH--HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMP----------NGDFPERL--NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~----------~g~~~~~~--~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
.|. .++.++++ ++...+++||.||.+ .++|||||+||+|||+|+.|++|++|||++-.+
T Consensus 172 -lMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 172 -LMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred -HHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 443 23555555 588899999999996 779999999999999999999999999998775
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.+.|+.||++||+.
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 8999999999999975
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.8e-24 Score=181.87 Aligned_cols=126 Identities=19% Similarity=0.274 Sum_probs=105.9
Q ss_pred eEeccCCcEEEEEEEEcCCc-----------EEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 159 HLLGTESLGSVYKWIFLDET-----------NVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
+.||+|+||.||+|.+.+.. .+++|.+...... ...+.+|+.++++++||||+++++++.. ...+
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~ 76 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR---DENI 76 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec---CCcE
Confidence 36899999999999975432 4788877654332 5778899999999999999999998875 4467
Q ss_pred EEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-------ceEEcccc
Q 036266 228 LSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-------VAHVSDFN 287 (312)
Q Consensus 228 l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-------~~kl~DFG 287 (312)
+++||+++|++.+ ++.++.|++.||+||| +++|+||||||+||+++.++ .+|++|||
T Consensus 77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 8889999886543 4468899999999999 89999999999999999877 79999999
Q ss_pred chhh
Q 036266 288 ISKL 291 (312)
Q Consensus 288 ~a~~ 291 (312)
+++.
T Consensus 154 ~a~~ 157 (259)
T cd05037 154 IPIT 157 (259)
T ss_pred cccc
Confidence 9876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.2e-24 Score=185.14 Aligned_cols=151 Identities=23% Similarity=0.375 Sum_probs=128.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+|...+.+|+|+||.||++... +++.||+|.+........+.+.+|+.++++++||||+++++.+.. ....++++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv~ 95 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV--GDELWVVM 95 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee--CCcEEEEE
Confidence 467888899999999999999864 578899999875544445678899999999999999999998874 34578888
Q ss_pred cccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
||++++++. ++..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 96 e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~ 172 (293)
T cd06647 96 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 172 (293)
T ss_pred ecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence 899988654 34569999999999999 899999999999999999999999999975421
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||.
T Consensus 173 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~ 216 (293)
T cd06647 173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL 216 (293)
T ss_pred ccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888999999999875
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=180.46 Aligned_cols=127 Identities=26% Similarity=0.390 Sum_probs=106.8
Q ss_pred eEeccCCcEEEEEEEEcC-C---cEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLD-E---TNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|.+.. + ..+|+|.+..... ...+.+.+|++++++++||||+++++++.. ...+++|+|+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEEeC
Confidence 368999999999998532 2 5799999986542 345678899999999999999999998752 3468888999
Q ss_pred CCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 234 PNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 234 ~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|++. .+..++.|++.|++||| ..+++||||||+||+++.++.+|++|||+++.
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccce
Confidence 888654 34579999999999999 88999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=182.12 Aligned_cols=126 Identities=19% Similarity=0.299 Sum_probs=105.1
Q ss_pred EeccCCcEEEEEEEEcCC---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 160 LLGTESLGSVYKWIFLDE---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.||+|+||.||++...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+.. ....+++|||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEEEEecCCC
Confidence 589999999999985443 246677766433 3445678999999999999999999998873 4567899999999
Q ss_pred CCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 236 GDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 236 g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|++.+. ..++.|+++||+||| +.+++||||||+||+++.++.+|++|||++.
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEeccccccc
Confidence 877543 357899999999999 8899999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=180.43 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=130.7
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.+|+|++|.||+|... +++.||+|++..... .....+.+|++.+++++|+|++++++++... ...++++|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--CeEEEEEE
Confidence 5788899999999999999976 488899999876543 4457789999999999999999999998743 56788888
Q ss_pred ccCCCCHHHH------------HHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 232 VMPNGDFPER------------LNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 232 ~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|++++++.+. ..++.|+++|++|+| + .+++||||+|+||+++.++.++|+|||.++..
T Consensus 80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9998866544 469999999999999 8 99999999999999999999999999977642
Q ss_pred ------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|++||+.|+.+.
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 157 CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 88999999999998654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=189.30 Aligned_cols=138 Identities=19% Similarity=0.253 Sum_probs=117.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...+.|...+.+|+|+||.||-|..+ +|+.+|.|++.+.. .+.......|-.++.+++.+.||.+--.|+.. ..
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk--d~ 259 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK--DA 259 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC--Cc
Confidence 34567899999999999999999854 68999999997654 23334467899999999999999998777744 45
Q ss_pred EEEEecccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++++..|.+||+ ...+-++.+|+-||++|| ..+||.||+||+|||+|+.|+++|+|.|+|..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAve 336 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVE 336 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEe
Confidence 7777779999854 445569999999999999 89999999999999999999999999999987
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
+
T Consensus 337 i 337 (591)
T KOG0986|consen 337 I 337 (591)
T ss_pred c
Confidence 6
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=183.92 Aligned_cols=149 Identities=23% Similarity=0.286 Sum_probs=123.8
Q ss_pred ccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILK 224 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 224 (312)
+|+..+.+|+|+||.||.|... +|+.||+|+++... ....+.+.+|+++++++ +|+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~--~~ 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--DT 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec--CC
Confidence 3677889999999999999863 57889999997532 22345678899999999 59999999988773 45
Q ss_pred cEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..++++||++++++.+.+ .++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 79 KLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred eEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 678899999998765543 47789999999999 899999999999999999999999999976431
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 788889999988874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=188.39 Aligned_cols=155 Identities=22% Similarity=0.340 Sum_probs=127.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--- 223 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 223 (312)
...++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35677999999999999999999854 68889999986432 3334567889999999999999999998864322
Q ss_pred -ccEEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 224 -KPWYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 224 -~~~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..++++|+|+.+. ++.....++.|+++|++||| +.+|+||||||+||+++.++.+|++|||+++..
T Consensus 92 ~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 92 FHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred cceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 3468888888321 34455679999999999999 899999999999999999999999999987532
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 888899999988875
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-24 Score=183.16 Aligned_cols=150 Identities=21% Similarity=0.350 Sum_probs=126.1
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC---CCceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR---HRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~l 228 (312)
.|+..+.+|+|+||.||+|... +++.||+|.++... ......+.+|+.++++++ |||++++++++. .....++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~--~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL--KGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee--eCCEEEE
Confidence 4677789999999999999964 67889999987543 334456788999998886 999999999886 3456788
Q ss_pred EecccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 229 SSCVMPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+|||++++++.+ .+.++.|++.|+.||| +.+|+||||+|+||++++++.++++|||++..+
T Consensus 80 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 80 IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999886544 3468999999999999 899999999999999999999999999976442
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+.+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 204 (277)
T cd06917 157 KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSD 204 (277)
T ss_pred ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999888754
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=189.99 Aligned_cols=154 Identities=27% Similarity=0.312 Sum_probs=128.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh--hhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ--LERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.+|+|+||.||+|.+. +++.+|+|++... .......+.+|+.+++++ +||||+++++++...+....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3457888899999999999999975 5778999988542 123345577899999999 99999999999876556678
Q ss_pred EEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 227 YLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 227 ~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
++++||+++. ++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 85 YLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 8999998741 34455569999999999999 899999999999999999999999999987521
Q ss_pred --------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|++
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 888999999988875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=202.34 Aligned_cols=136 Identities=19% Similarity=0.208 Sum_probs=103.6
Q ss_pred hccccccceEeccCCcEEEEEEEEcC--CcEEEEEEe--------------eh---hhhHhHHHHHHHHHHhhcCCCCce
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD--ETNVAIKVF--------------NL---QLERAFRSFDSKCEVHKNVRHRNL 211 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~~---~~~~~~~~~~~e~~~l~~l~h~ni 211 (312)
...+|+..+.||+|+||.||+|..+. +..++.|.+ .+ ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35689999999999999999987542 222222211 11 012234567899999999999999
Q ss_pred eeeeeeeeecccccEEEEecccCCC----------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee
Q 036266 212 IKILTTIAILILKPWYLSSCVMPNG----------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL 275 (312)
Q Consensus 212 v~~~~~~~~~~~~~~~l~~~~~~~g----------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill 275 (312)
+++++++...+ ..+++++++... .+.+...++.|++.||+||| +++||||||||+|||+
T Consensus 226 v~l~~~~~~~~--~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl 300 (501)
T PHA03210 226 LKIEEILRSEA--NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFL 300 (501)
T ss_pred CcEeEEEEECC--eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEE
Confidence 99999987544 456666655432 12344579999999999999 8999999999999999
Q ss_pred CCCCceEEccccchhh
Q 036266 276 DEDMVAHVSDFNISKL 291 (312)
Q Consensus 276 ~~~~~~kl~DFG~a~~ 291 (312)
+.++.+||+|||+|+.
T Consensus 301 ~~~~~vkL~DFGla~~ 316 (501)
T PHA03210 301 NCDGKIVLGDFGTAMP 316 (501)
T ss_pred CCCCCEEEEeCCCcee
Confidence 9999999999999864
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=185.29 Aligned_cols=137 Identities=18% Similarity=0.305 Sum_probs=113.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc-----
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----- 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 222 (312)
..++|+..+.+|+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 3457889999999999999999975 57889999986532 222334568999999999999999999876432
Q ss_pred -cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 223 -LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 223 -~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
....+++|||+.+. ++.+...++.|++.|++||| +.+++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 23568889998743 45566789999999999999 889999999999999999999999999977
Q ss_pred h
Q 036266 290 K 290 (312)
Q Consensus 290 ~ 290 (312)
.
T Consensus 167 ~ 167 (310)
T cd07865 167 R 167 (310)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-24 Score=184.65 Aligned_cols=152 Identities=18% Similarity=0.234 Sum_probs=123.9
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeeccc---cc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILIL---KP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~---~~ 225 (312)
++|+..+.+|+|+||.||+|... +++.||+|.++... ......+.+|+.++++++ ||||+++++++..... ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888899999999999999975 57889999987543 223356788999999995 6999999998764332 23
Q ss_pred EEEEecccCCC----------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccc
Q 036266 226 WYLSSCVMPNG----------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNI 288 (312)
Q Consensus 226 ~~l~~~~~~~g----------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~ 288 (312)
.+++|||+++. ++.....++.||++||+||| +++|+||||||+||+++. ++.+|++|||+
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~ 157 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeeccc
Confidence 78899998852 33455679999999999999 899999999999999998 89999999997
Q ss_pred hhhh-------------------------------------hhhhhhhhcCCCCCc
Q 036266 289 SKLL-------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 289 a~~~-------------------------------------g~~~~e~~tg~~p~~ 307 (312)
++.+ |++++|+++|..|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~ 213 (295)
T cd07837 158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP 213 (295)
T ss_pred ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence 6531 788888888888774
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=181.41 Aligned_cols=132 Identities=21% Similarity=0.297 Sum_probs=111.2
Q ss_pred ccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 154 EFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
+|+..+.+|+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. ....
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 78 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DSHF 78 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CCeE
Confidence 467788999999999999986 467889999987432 2245678899999999999999999999873 4467
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchh
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~ 290 (312)
++++||++++++.+ ..+++.|++.|+.||| +.+++||||||+||+++.++ .+||+|||.+.
T Consensus 79 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 79 NLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred EEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 78888999886544 3468999999999999 88999999999999998765 69999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=181.97 Aligned_cols=133 Identities=23% Similarity=0.359 Sum_probs=112.8
Q ss_pred cccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
++|+..+.+|+|+||.||+|+.+ +.+.||+|.+...... ....+.+|++++++++||||+++++++.. ...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE--AEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC--CCc
Confidence 56888899999999999999864 2356999998764433 45678999999999999999999998863 455
Q ss_pred EEEEecccCCCCHH---------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc
Q 036266 226 WYLSSCVMPNGDFP---------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 226 ~~l~~~~~~~g~~~---------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~ 284 (312)
.+++|||+++|++. +++.++.|++.||+||| +.+|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEc
Confidence 78888899877554 34468999999999999 8899999999999999999999999
Q ss_pred cccchh
Q 036266 285 DFNISK 290 (312)
Q Consensus 285 DFG~a~ 290 (312)
|||+++
T Consensus 160 ~~~~~~ 165 (275)
T cd05046 160 LLSLSK 165 (275)
T ss_pred cccccc
Confidence 999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=180.49 Aligned_cols=128 Identities=25% Similarity=0.392 Sum_probs=105.4
Q ss_pred eEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|...+ ...||+|.+.... ....+.+.+|+.+++.++||||+++++++...+ ...+++++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-GSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-CCcEEEEecC
Confidence 368999999999998542 3469999986432 344567889999999999999999999765333 3467888899
Q ss_pred CCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 234 PNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 234 ~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++|++.+ .+.++.|+++|++||| +.+++||||||+||++++++.+|++|||+++
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~ 146 (262)
T cd05058 80 KHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLAR 146 (262)
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccc
Confidence 8886543 3468899999999999 8899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=185.61 Aligned_cols=132 Identities=27% Similarity=0.335 Sum_probs=113.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
+|+..+.+|+|++|.||+|... +++.||+|.+.... ....+.+..|+++++.++||||+++++.+. .....+++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv 79 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--TETYLCLV 79 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee--cCCEEEEE
Confidence 6788899999999999999975 47889999997643 124566888999999999999999999886 44567888
Q ss_pred ecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 230 SCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|||+.++++.+. ..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++.
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhh
Confidence 999988866543 358899999999999 8999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=178.62 Aligned_cols=149 Identities=22% Similarity=0.329 Sum_probs=125.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|+||.+|++... +++.||+|.+.... ....+++.+|+.++++++||||+++++++. .....++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE--ENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec--CCCeEEEEE
Confidence 4778899999999999999864 67889999987532 334467889999999999999999999886 345678889
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||++++++. +.++++.|++.|++||| +.+++|+||+|+||+++.++.++++|||.+..+
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 999887553 34578999999999999 889999999999999999999999999987532
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence 888888888888864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=181.50 Aligned_cols=132 Identities=26% Similarity=0.362 Sum_probs=111.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh----------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL----------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
+|...+.+|+|++|.||+|... +++.||+|.++... ....+.+.+|+.++++++|||++++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 3667789999999999999864 57889999886421 1123467889999999999999999998874
Q ss_pred cccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
....++++||++++++.+. ..++.|++.|+.||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 4567888899999876544 358899999999999 8899999999999999999999999999775
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-24 Score=189.98 Aligned_cols=154 Identities=22% Similarity=0.323 Sum_probs=127.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~ 226 (312)
..+|+..+.||+|++|.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888899999999999999965 58899999987542 23345677899999999999999999887543 33467
Q ss_pred EEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 227 YLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 227 ~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++++||+.+. ++.....++.|++.||+||| +++|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 8899998532 44556679999999999999 889999999999999999999999999987431
Q ss_pred --------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~ 214 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPG 214 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCC
Confidence 8888888999888754
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=178.88 Aligned_cols=127 Identities=31% Similarity=0.506 Sum_probs=109.0
Q ss_pred eEeccCCcEEEEEEEEcCCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC
Q 036266 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD 237 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~ 237 (312)
+.+|+|++|.||++...+++.||+|.+..... .....+.+|++++++++||||+++++++. .....++++||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV--QKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe--cCCCeEEEEEcCCCCc
Confidence 36899999999999976688999999876432 34567889999999999999999999887 3456788888998875
Q ss_pred HHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 238 FPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 238 ~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+.+ .+.++.+++.|++||| +.+++||||||+||+++.++.+|++|||+++
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~ 141 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSR 141 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccc
Confidence 543 3468899999999999 8899999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=179.58 Aligned_cols=132 Identities=25% Similarity=0.392 Sum_probs=112.5
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+|+..+.+|+|+||.||++.+.+++.+|+|.+.... .....+.+|++++++++|||++++++++.. ....++++||
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e~ 80 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTE--RSPICLVFEF 80 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEcc--CCceEEEEEc
Confidence 4677789999999999999988777889999987542 223568899999999999999999998763 4467888999
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++++++. ....++.|++.|++||| +.+++||||||+||+++.++.+||+|||.++
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCccee
Confidence 9887554 34468899999999999 8899999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=182.55 Aligned_cols=150 Identities=23% Similarity=0.298 Sum_probs=126.1
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.+|+|++|.||+|... +++.+|+|.+.... ......+.+|++++++++|||++++++++........+++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999976 47889999998653 334456788999999999999999999987543367889999
Q ss_pred ccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 232 VMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 232 ~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
|+++. ++.+.+.++.|++.|++||| ..+++|+||||+||++++++.+|++|||+++..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 98742 34455689999999999999 889999999999999999999999999976532
Q ss_pred -------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|+.
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~ 203 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 788888888888874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=182.56 Aligned_cols=132 Identities=23% Similarity=0.302 Sum_probs=113.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.. ....++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH--GSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec--CCeeEEEe
Confidence 4778889999999999999975 67889999997643 3345678899999999999999999999874 55678889
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||+ ++++.+ ...++.|+++|++||| +.+++|+||||+||+++.++.++++|||+++.
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~ 148 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARL 148 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeeccc
Confidence 999 776544 3468999999999999 88999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-24 Score=195.62 Aligned_cols=152 Identities=28% Similarity=0.465 Sum_probs=133.6
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+....+.+|-|.||.||.|.|+. .-.||||.++.+. ....+|..|+.+|+.++|||+|+++|+|. .+..+|++.
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT--~EpPFYIiT 342 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--HEPPFYIIT 342 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhc--cCCCeEEEE
Confidence 3445567899999999999999875 4569999998764 34578999999999999999999999997 566789999
Q ss_pred cccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||..|++.+.+ .++.||+.|++||. .++.|||||-.+|+|+.++..+||+|||+++++
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 999999887765 48999999999999 999999999999999999999999999999996
Q ss_pred ---------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ---------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ---------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|+++||+.| |-.|||++
T Consensus 420 YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi 470 (1157)
T KOG4278|consen 420 YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 470 (1157)
T ss_pred eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc
Confidence 999999987 66777764
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.1e-24 Score=184.00 Aligned_cols=133 Identities=23% Similarity=0.307 Sum_probs=113.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|... +++.||+|.++... ....+.+.+|++++++++|+||+++++++.. ....++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 79 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KGRLYLVF 79 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE--CCEEEEEE
Confidence 5788899999999999999975 57789999987532 3334678899999999999999999999874 45678889
Q ss_pred cccCCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||++++.+ .+...++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~ 149 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARA 149 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccc
Confidence 99987743 344579999999999999 88999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=181.21 Aligned_cols=150 Identities=21% Similarity=0.269 Sum_probs=128.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+|+..+.||+|++|.||++... +++.+|+|.+.... ......+.+|++++++++||||+++++.+.. ....++++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN--NGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec--CCEEEEEEE
Confidence 5677789999999999999976 57889999987653 3445678899999999999999999998874 366788889
Q ss_pred ccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNGDFPER-------------LNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|++++++.+. .+++.|++.|++|+| + .+++||||||+||++++++.+||+|||.+...
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9998766543 358999999999999 7 89999999999999999999999999987642
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 157 KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 8888999999988754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=181.19 Aligned_cols=143 Identities=22% Similarity=0.275 Sum_probs=120.2
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
||+|+||.||+|... +++.||+|.+.... ......+..|++++++++||||+++++.+.. ....+++|||++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEecCCCC
Confidence 589999999999864 68889999997532 2234456789999999999999999988874 45678999999988
Q ss_pred CHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 237 DFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 237 ~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
++.+. ..++.|++.|+.||| +.+++||||||+||++++++.+|++|||.+...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 155 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA 155 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence 66543 358899999999999 899999999999999999999999999987642
Q ss_pred -------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 8889999999998753
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=180.56 Aligned_cols=137 Identities=20% Similarity=0.310 Sum_probs=116.2
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc----c
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI----L 223 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~----~ 223 (312)
...++|+..+.+|+|++|.||+|... +++.+|+|++..... ....+.+|+.+++++ +|+||+++++++.... .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 45678999999999999999999975 577899999876533 346788999999998 6999999999986433 4
Q ss_pred ccEEEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcccc
Q 036266 224 KPWYLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
...+++|||++++++.+. ..++.|++.|++||| +.+++|+||+|+||++++++.+|++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 557899999998765432 348899999999999 8999999999999999999999999999
Q ss_pred chh
Q 036266 288 ISK 290 (312)
Q Consensus 288 ~a~ 290 (312)
++.
T Consensus 159 ~~~ 161 (275)
T cd06608 159 VSA 161 (275)
T ss_pred cce
Confidence 764
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=202.94 Aligned_cols=136 Identities=21% Similarity=0.326 Sum_probs=117.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|...+.||+|+||.||+|.+. +++.||||+++... ......+..|+.+++.++||||+++++++. ....++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~--~~~~~~ 80 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ--SANNVY 80 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE--ECCEEE
Confidence 457888999999999999999976 57889999997542 233466888999999999999999998876 345688
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++|||++++++... ++|+.||+.||+||| ..+||||||||+|||++.++.+||+|||+++..
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 99999999876543 468999999999999 889999999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-23 Score=179.34 Aligned_cols=132 Identities=23% Similarity=0.368 Sum_probs=113.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.||+|++|.||+|... +++.||+|.++.... ...+.+.+|+.++++++|+||+++++++. .....++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~--~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV--HREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe--cCCEEEEEE
Confidence 4777899999999999999865 678899999986543 36678899999999999999999999876 345678888
Q ss_pred cccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 231 CVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 231 ~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
||++++++.+. ..++.|++.|++||| +.+|+||||||+||++++++.+||+|||.+.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~ 147 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAV 147 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccccccc
Confidence 89998865543 468999999999999 8999999999999999999999999999664
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=183.65 Aligned_cols=151 Identities=23% Similarity=0.269 Sum_probs=125.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..|+..+.+|+|+||.||+++.. ++..||+|.+.... ......+..|++++++++|||++++++++.. ....++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~l 102 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR--EHTAWL 102 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--CCeEEE
Confidence 34777889999999999999965 57889999987432 3344578889999999999999999999874 345678
Q ss_pred EecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++. ++.++..++.|++.|+.||| +.+|+||||||+||+++.++.+|++|||++...
T Consensus 103 v~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (317)
T cd06635 103 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN 179 (317)
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc
Confidence 88898753 34555679999999999999 889999999999999999999999999975421
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 226 (317)
T cd06635 180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 226 (317)
T ss_pred cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999988643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=183.64 Aligned_cols=155 Identities=21% Similarity=0.207 Sum_probs=113.4
Q ss_pred ccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhhhHh-----------HHHHHHHHHHhhcCCCCceeeeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQLERA-----------FRSFDSKCEVHKNVRHRNLIKILT 216 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~~~~ 216 (312)
..+|...+.||+|+||.||+|...+ +..+|+|+........ ......+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578999999999999999999654 3456777643322110 111223344566778999999998
Q ss_pred eeeeccc--ccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 217 TIAILIL--KPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 217 ~~~~~~~--~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
++..... ...+++++++... +......++.|+++|++||| +.+|+||||||+|||++.++.+||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEE
Confidence 7543322 1234555544221 33445679999999999999 889999999999999999999999
Q ss_pred ccccchhhh-------------------------------------------hhhhhhhhcCCCCCccc
Q 036266 284 SDFNISKLL-------------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 284 ~DFG~a~~~-------------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
+|||+|+.+ |++++|+++|+.||.+.
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 999997521 99999999999998653
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.2e-26 Score=185.04 Aligned_cols=139 Identities=17% Similarity=0.304 Sum_probs=114.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec------
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL------ 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 221 (312)
....|.....+|+|.||.||+|+.+ +++.||+|++-.+. +.......+|++++..++|+|++.+++.|...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 3445677789999999999999965 57779998765432 23334567899999999999999999887432
Q ss_pred ccccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 222 ILKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
+...+|+++.+|+.. ++.+..+++.++..||.|+| ...|+|||+||+|+||+.+|.+||+|||+|
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 234588998888753 56777789999999999999 899999999999999999999999999999
Q ss_pred hhh
Q 036266 290 KLL 292 (312)
Q Consensus 290 ~~~ 292 (312)
+.+
T Consensus 172 r~f 174 (376)
T KOG0669|consen 172 RAF 174 (376)
T ss_pred cce
Confidence 775
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-23 Score=177.25 Aligned_cols=151 Identities=25% Similarity=0.414 Sum_probs=127.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|+..+.+|.|++|.||+|... ++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+.. ....++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVV--GDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEee--CCEEEEEE
Confidence 36888999999999999999965 57789999987543 3355778999999999999999999988763 45678889
Q ss_pred cccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|+++++++.+ ...++.|++.|++||| +.+++||||||+||++++++.+|++|||++..+
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9998875443 3458899999999999 899999999999999999999999999986432
Q ss_pred --------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 209 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK 209 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence 7888888888888753
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-23 Score=181.43 Aligned_cols=149 Identities=15% Similarity=0.170 Sum_probs=122.8
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.+|+|+||.||+|... +++.||+|.++... ........+|+.+++++. |||++++++++........++++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 556788999999999999965 57889999987542 222233457888888885 999999999988654467889999
Q ss_pred ccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 232 VMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 232 ~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
|+++. ++.+...++.|++.||+||| +.+++||||||+||+++. +.+||+|||+++..
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 98643 45566789999999999999 889999999999999999 99999999987542
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 888999999988885
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-23 Score=179.62 Aligned_cols=149 Identities=17% Similarity=0.318 Sum_probs=125.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|...+.||+|++|.||++... +++.+|+|.++.......+.+.+|+.+++.++||||+++++++.. ....++++||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~~~~~v~e~ 97 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GDELWVVMEF 97 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CCeEEEEEec
Confidence 4556679999999999999864 678899999876544455668899999999999999999998874 3456888889
Q ss_pred cCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 233 MPNGDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 233 ~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++++++.+ ...++.|++.|++|+| +.+|+||||||+||+++.++.++++|||.+...
T Consensus 98 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~ 174 (285)
T cd06648 98 LEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS 174 (285)
T ss_pred cCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccc
Confidence 99886654 3469999999999999 899999999999999999999999999976531
Q ss_pred ---------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 175 ~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~ 216 (285)
T cd06648 175 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYF 216 (285)
T ss_pred ccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCc
Confidence 888889999888864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=186.98 Aligned_cols=154 Identities=23% Similarity=0.361 Sum_probs=127.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----cc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----LK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~~ 224 (312)
..+|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++.... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 468888999999999999999964 68899999986532 223456788999999999999999999876432 23
Q ss_pred cEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 225 PWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 225 ~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
.++++++|+... ++.....++.|++.|++||| +.+|+||||||+||+++.++.+|++|||+++..
T Consensus 94 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred eEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 467888887531 44555679999999999999 889999999999999999999999999987542
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 171 MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999888753
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=180.53 Aligned_cols=144 Identities=19% Similarity=0.208 Sum_probs=114.1
Q ss_pred EeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHH---HhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCE---VHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+|+|+||.||++... +++.+|+|.+.... ......+.+|.. ++...+||||+.+++++.. ....+++|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT--PDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec--CCeEEEEEec
Confidence 3799999999999975 57889999986532 111222334443 3344579999999988874 3457888999
Q ss_pred cCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 233 MPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 233 ~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
+++|++... ..++.|++.|++||| +.+|+||||||+||++++++.+|++|||++...
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 155 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCc
Confidence 999977543 358999999999999 889999999999999999999999999987431
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 198 (279)
T cd05633 156 VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ 198 (279)
T ss_pred CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence 8888999999988854
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-24 Score=196.51 Aligned_cols=133 Identities=26% Similarity=0.402 Sum_probs=116.6
Q ss_pred ccccceEeccCCcEEEEEEEEc--CCc--EEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL--DET--NVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.....++||+|.||.|++|.|. .|+ .||||+++.+.. ....+|.+|+.+|.+|+|||++++||.... ..+.|
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~---qp~mM 187 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD---QPAMM 187 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc---chhhH
Confidence 3455678999999999999985 344 499999987653 367889999999999999999999998763 56788
Q ss_pred EecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++|.++.|++.+++ .++.|||.|++||. .++.|||||-.+|+|+.....+||+|||+.+-+
T Consensus 188 V~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 188 VFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred HhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceecc
Confidence 99999999998876 49999999999999 899999999999999999899999999998875
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-24 Score=180.57 Aligned_cols=152 Identities=24% Similarity=0.258 Sum_probs=127.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHh---HHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERA---FRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
-+++|...+.+|+|+||.|..|+-+ +++.+|+|++++..-.. ...-..|-++|+..+||.+..+--.|+ ....+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQ--t~drl 243 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQ--TQDRL 243 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhc--cCceE
Confidence 4577888999999999999999854 68889999998765222 222356889999999999999877777 44568
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
|++|||..+|++.. ..-+...|+.||.||| +++||.||+|.+|.|+|.+|++||+|||+++.-
T Consensus 244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 89999999995421 1237889999999999 899999999999999999999999999999873
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||.+|+.||-
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFy 369 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFY 369 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccc
Confidence 899999999999974
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.9e-24 Score=191.94 Aligned_cols=134 Identities=25% Similarity=0.429 Sum_probs=115.8
Q ss_pred cccccceEeccCCcEEEEEEEEcC---Cc--EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD---ET--NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
+.....+.||+|.||.||+|.+.+ |. .||||.-+.+. ....+.|..|..+|++++|||||+++|+|. ....
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~---e~P~ 465 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV---EQPM 465 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee---ccce
Confidence 345567899999999999999642 33 39999988744 455778999999999999999999999987 4568
Q ss_pred EEEecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|++||.++.|.+...+ .++.||+.||+||| +...|||||-.+|||+....-+|++|||+++.+
T Consensus 466 WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred eEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999665554 48999999999999 999999999999999999999999999999986
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=180.75 Aligned_cols=148 Identities=23% Similarity=0.346 Sum_probs=123.8
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.+|.|++|.||+|... +++.||+|++.... ......+.+|++++++++|||++++++++.. ....++++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~--~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHS--ENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheecc--CCeEEEEEe
Confidence 566789999999999999965 68899999987543 2233567889999999999999999999873 456788888
Q ss_pred ccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 232 VMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 232 ~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|++.. ++..+++++.|+++||+||| +++++||||+|+||+++.++.++|+|||+++..
T Consensus 79 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~ 155 (283)
T cd07835 79 FLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT 155 (283)
T ss_pred ccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence 87531 45556689999999999999 889999999999999999999999999987532
Q ss_pred -------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 201 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP 201 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 888888888888874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.1e-23 Score=177.56 Aligned_cols=143 Identities=29% Similarity=0.344 Sum_probs=121.9
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
+|.|++|.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++. +....++++||++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK--DKKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE--cCCccEEEEecCCCC
Confidence 589999999999975 47889999997543 234467889999999999999999999876 445678889999988
Q ss_pred CHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------
Q 036266 237 DFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------ 292 (312)
Q Consensus 237 ~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------ 292 (312)
++.+.+ .++.|+++|++|+| +.+++|+||||+||+++.++.+|++|||+++..
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 155 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGT 155 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCC
Confidence 765543 58899999999999 899999999999999999999999999987642
Q ss_pred -----------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+..
T Consensus 156 ~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 156 PEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred cCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 8888999999888754
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=179.23 Aligned_cols=144 Identities=19% Similarity=0.218 Sum_probs=114.5
Q ss_pred EeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHH---HHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKC---EVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.||+|+||.||+|... +++.||+|.+.... ......+..|. +.++...||+|+++.+++.. ....+++|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEEec
Confidence 3799999999999864 57889999987532 11112233333 34555689999999988874 3467888999
Q ss_pred cCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 233 MPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 233 ~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
+++|++. ++..++.|+++|++||| +.+|+||||||+||+++.++.+|++|||+++.+
T Consensus 79 ~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (278)
T cd05606 79 MNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 155 (278)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCc
Confidence 9988654 44569999999999999 889999999999999999999999999987532
Q ss_pred ---------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~ 198 (278)
T cd05606 156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 198 (278)
T ss_pred CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=183.39 Aligned_cols=136 Identities=19% Similarity=0.306 Sum_probs=113.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI------ 222 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 222 (312)
.++|+..+.||+|++|.||+|... +++.+|+|++.... ......+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 568999999999999999999965 57889999986543 222345678999999999999999998775322
Q ss_pred cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
...++++++|+... ++.+...++.|+++||+||| +.+|+||||||+||++++++.+|++|||+++
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 23568888887642 45566789999999999999 8899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=180.46 Aligned_cols=144 Identities=28% Similarity=0.474 Sum_probs=118.9
Q ss_pred EeccCCcEEEEEEEEcC-------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 160 LLGTESLGSVYKWIFLD-------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.+|+|+||.||+|...+ ++.+|+|.+.... ......+.+|+.++++++||||+++++++.. ....+++||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NEPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CCCeEEEEe
Confidence 68999999999998642 2469999886543 2345678899999999999999999998863 445788888
Q ss_pred ccCCCCHHH-------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-----ceEEcccc
Q 036266 232 VMPNGDFPE-------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-----VAHVSDFN 287 (312)
Q Consensus 232 ~~~~g~~~~-------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-----~~kl~DFG 287 (312)
|++++++.+ .+.++.|++.|++||| +.+++|+||||+||+++.++ .+|++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999876543 3458899999999999 88999999999999999877 89999999
Q ss_pred chhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 288 ISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 288 ~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+++.. |++++|++| |+.|+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~ 216 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPA 216 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcc
Confidence 87521 888999998 8888764
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-24 Score=190.82 Aligned_cols=148 Identities=22% Similarity=0.339 Sum_probs=123.2
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCC---CCceeeeeeeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVR---HRNLIKILTTIA 219 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~ 219 (312)
..+|...+.+|+|+||.|+.|.++. ...|+||.|.+.. ......+..|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 4458888999999999999999865 4569999997643 122334667999999997 999999999999
Q ss_pred ecccccEEEEecccCCC-CHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 220 ILILKPWYLSSCVMPNG-DFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g-~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
+..++|++||.-..| |+.+ ..-|++||+.|+++|| +.+|||||||-+||.+|.+|-+|++||
T Consensus 640 --ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 640 --DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred --cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeec
Confidence 666788888865544 4433 3359999999999999 999999999999999999999999999
Q ss_pred cchhhh------------hhhhhhhhcCCC
Q 036266 287 NISKLL------------GVLLPETFTRKK 304 (312)
Q Consensus 287 G~a~~~------------g~~~~e~~tg~~ 304 (312)
|.|... +|.+||++.|..
T Consensus 715 gsaa~~ksgpfd~f~gtv~~aapevl~g~~ 744 (772)
T KOG1152|consen 715 GSAAYTKSGPFDVFVGTVDYAAPEVLGGEK 744 (772)
T ss_pred cchhhhcCCCcceeeeeccccchhhhCCCc
Confidence 998875 888999988864
|
|
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-23 Score=185.89 Aligned_cols=153 Identities=20% Similarity=0.280 Sum_probs=126.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---ccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~ 225 (312)
..+|...+.+|+|+||.||+|... +++.||||.+.... ......+.+|+.+++.++||||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457888999999999999999964 67889999987532 233456778999999999999999999875432 235
Q ss_pred EEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
.++++||+.+. +......++.|++.|+.||| +.+++||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 78899998632 33445679999999999999 889999999999999999999999999987642
Q ss_pred -----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence 888888889888875
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=180.99 Aligned_cols=134 Identities=21% Similarity=0.268 Sum_probs=107.5
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|...+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. ||||+++++++... ...+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--CcEEEEE
Confidence 4556678999999999999965 57889999987543 334566888999999996 99999999988744 3455666
Q ss_pred cccCCC----------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNG----------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g----------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
||++.. +.....+++.|++.|++|||+ ..+++||||||+||+++.++.+||+|||+++.
T Consensus 83 e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~ 157 (288)
T cd06616 83 ELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQ 157 (288)
T ss_pred ecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHH
Confidence 676532 233456799999999999993 35899999999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.3e-24 Score=181.61 Aligned_cols=127 Identities=20% Similarity=0.235 Sum_probs=105.1
Q ss_pred EeccCCcEEEEEEEEcC-C-------cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 160 LLGTESLGSVYKWIFLD-E-------TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.||+|+||.||+|.... + ..+|+|.+........+.+.+|+.+++.++||||+++++++... ...+++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~e 79 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIMVQE 79 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEEEEe
Confidence 58999999999998642 2 24888888765555567788899999999999999999998743 44678888
Q ss_pred ccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc--------eEEccccchh
Q 036266 232 VMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV--------AHVSDFNISK 290 (312)
Q Consensus 232 ~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~--------~kl~DFG~a~ 290 (312)
|+++|++.+ .++++.|++.|++||| +++|+||||||+||+++.++. +|++|||++.
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999886544 3468999999999999 899999999999999987665 6999999875
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 157 ~ 157 (258)
T cd05078 157 T 157 (258)
T ss_pred c
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.5e-23 Score=176.14 Aligned_cols=128 Identities=33% Similarity=0.504 Sum_probs=109.3
Q ss_pred eEeccCCcEEEEEEEEcC----CcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLD----ETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|++.++.++|+|++++++++.. ....+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEEec
Confidence 368999999999999753 677999999865432 36778899999999999999999998874 55678888898
Q ss_pred CCCCH---------------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 234 PNGDF---------------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 234 ~~g~~---------------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++++ .+..+++.|+++|++||| +.+++||||||+||+++.++.+|++|||.++.
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccc
Confidence 76643 444579999999999999 89999999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-25 Score=180.16 Aligned_cols=149 Identities=22% Similarity=0.293 Sum_probs=117.7
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHh-hcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVH-KNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.+....||.|+||+|+|-.++ .|+..|||+++... +...+++..|.++. +.=+.||||++||.+-.+.. .|+-||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd--cWiCME 143 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD--CWICME 143 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc--eeeeHH
Confidence 344568899999999999875 68899999998654 45567788888755 44568999999998764444 455666
Q ss_pred ccCCCCHHHHH-----------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 232 VMPNGDFPERL-----------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 232 ~~~~g~~~~~~-----------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
.|+-. +.... .|..-.+.||.||-+ ...|||||+||+|||+|..|.+|+||||++-.+
T Consensus 144 LMd~S-lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 144 LMDIS-LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred HHhhh-HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 77643 11111 366677899999985 678999999999999999999999999998775
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.++|+.||++|+.+
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~ 271 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK 271 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence 8899999999999864
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-23 Score=183.03 Aligned_cols=155 Identities=23% Similarity=0.331 Sum_probs=127.4
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
....++|+..+.||.|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++.+++... ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP-LED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-CCc
Confidence 456778999999999999999999865 68889999886422 23345677899999999999999999988642 335
Q ss_pred EEEEecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
.++++||+. +++. ....++.|+++|++||| +.+|+||||||+||++++++.+|++|||.++..
T Consensus 85 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 85 IYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred EEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 678888885 3443 33458999999999999 899999999999999999999999999977542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|++.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999888753
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-23 Score=180.17 Aligned_cols=153 Identities=22% Similarity=0.254 Sum_probs=123.7
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.+|+|++|.||+|.+.+ ++.||||.++... ......+..|+.++.+.. ||||+++++++.. ....+
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 90 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT--DSDVF 90 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec--CCeEE
Confidence 34568889999999999999999764 7889999997543 233445666777666665 9999999999874 45678
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++|||+++. ++..+.+++.|+++|++||| + ++|+||||||+||++++++.+||+|||++..+
T Consensus 91 ~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 91 ICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 888888642 44556689999999999999 5 58999999999999999999999999987531
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 168 SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 7788888888888753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.2e-23 Score=181.37 Aligned_cols=146 Identities=18% Similarity=0.307 Sum_probs=123.5
Q ss_pred cceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 157 EWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
....+|+|+||.||++... +++.||||.+..........+.+|+.++++++|+|++++++++.. ....+++|||+++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 101 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVMEFLEG 101 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEEEEEecCCC
Confidence 3457899999999999874 678899999875544455678899999999999999999998874 4467888889998
Q ss_pred CCHHH-----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------
Q 036266 236 GDFPE-----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------ 292 (312)
Q Consensus 236 g~~~~-----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------ 292 (312)
+++.+ ...++.|++.|++||| +.+++||||||+||+++.++.++++|||++...
T Consensus 102 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 178 (292)
T cd06657 102 GALTDIVTHTRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG 178 (292)
T ss_pred CcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence 85543 4469999999999999 889999999999999999999999999976431
Q ss_pred ------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~ 217 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888889999888864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-24 Score=178.89 Aligned_cols=149 Identities=26% Similarity=0.387 Sum_probs=123.5
Q ss_pred hcccccc-ceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeee--ccccc
Q 036266 151 ATDEFNE-WHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAI--LILKP 225 (312)
Q Consensus 151 ~~~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~ 225 (312)
.+++|++ .+.+|-|-.|.|..|..+ +++.+|+|++... ....+|+++.-.. .|||||.++++|.. .....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 4455554 358899999999999865 5788999988532 3456788887666 49999999999863 24567
Q ss_pred EEEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccc
Q 036266 226 WYLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNI 288 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~ 288 (312)
+.++||.|++|++..|+ +|+.||+.|+.||| +.+|.||||||+|+|.. .+..+||+|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccccc
Confidence 88999999999988877 49999999999999 99999999999999996 456799999999
Q ss_pred hhhh-----------------------------------hhhhhhhhcCCCCCc
Q 036266 289 SKLL-----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 289 a~~~-----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|+.- |+++|-+++|.+||-
T Consensus 211 AK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFY 264 (400)
T KOG0604|consen 211 AKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_pred ccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccc
Confidence 9884 888888999988874
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=173.80 Aligned_cols=150 Identities=27% Similarity=0.420 Sum_probs=127.2
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||++... +++.||+|.+..... .....+.+|++++++++|||++++++++.. ....++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CCEEEEEE
Confidence 3677889999999999999865 577899999976542 455778999999999999999999998874 45678888
Q ss_pred cccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
++++++++.+ ...++.|++.|+.||| +.+|+||||||+||+++.++.+||+|||.++..
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9998876544 3469999999999999 899999999999999999999999999977642
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~ 201 (254)
T cd06627 156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYD 201 (254)
T ss_pred ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 7788888888888643
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=167.30 Aligned_cols=154 Identities=22% Similarity=0.311 Sum_probs=120.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHh-hcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVH-KNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..+.......+|+|++|.|-+-++. +|+..|+|.++... .+..++..+|+.+. +....|.+|.+||... +....+
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~--regdvw 121 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALF--REGDVW 121 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhh--ccccEE
Confidence 3344555678999999999888865 68889999998654 34445667787754 5567999999999765 344566
Q ss_pred EEecccCCC-------------CHHHH--HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 228 LSSCVMPNG-------------DFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g-------------~~~~~--~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+-||.|+-. ..++- -+|+..++.|+.|||+ +..+||||+||+|||++.+|++|+||||++-.+
T Consensus 122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L 199 (282)
T KOG0984|consen 122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYL 199 (282)
T ss_pred EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceee
Confidence 767777532 22222 2699999999999995 679999999999999999999999999987664
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+...|+.++++||+-
T Consensus 200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred hhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 7888899999998863
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-23 Score=175.04 Aligned_cols=130 Identities=27% Similarity=0.467 Sum_probs=110.7
Q ss_pred ccceEeccCCcEEEEEEEEcC-C----cEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 156 NEWHLLGTESLGSVYKWIFLD-E----TNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
+..+.+|.|+||.||+|...+ + ..||+|.+...... ..+.+..|++.+++++|+||+++++++... ...+++
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~i 79 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPLMIV 79 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--CeeEEE
Confidence 456789999999999999753 3 67999999765432 567789999999999999999999988743 567888
Q ss_pred ecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 230 SCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|||++++++. +...++.|++.|++||| +.+++||||||+||++++++.++++|||+++
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~ 151 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSR 151 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCce
Confidence 8899887543 33568999999999999 8899999999999999999999999999885
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.7e-23 Score=185.86 Aligned_cols=153 Identities=22% Similarity=0.359 Sum_probs=125.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc-------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL------- 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------- 223 (312)
..+|...+.||.|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++.+.....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367889999999999999999965 578899999976555555678889999999999999999987653321
Q ss_pred -----ccEEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEcccc
Q 036266 224 -----KPWYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFN 287 (312)
Q Consensus 224 -----~~~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG 287 (312)
...++++||+++. +......++.|++.|++||| +.+|+||||||+||+++ +++.+|++|||
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg 160 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFG 160 (342)
T ss_pred cccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcc
Confidence 2468889998741 23445579999999999999 88999999999999998 45678999999
Q ss_pred chhhh----------------------------------------hhhhhhhhcCCCCCc
Q 036266 288 ISKLL----------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 288 ~a~~~----------------------------------------g~~~~e~~tg~~p~~ 307 (312)
.++.. |++++|+++|+.|+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~ 220 (342)
T cd07854 161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA 220 (342)
T ss_pred cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence 87421 888889999988875
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.6e-23 Score=177.03 Aligned_cols=125 Identities=26% Similarity=0.367 Sum_probs=107.4
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
+|+|+||.||++... +++.+|+|.+..... .....+.+|++++++++||||+++++.+. .....++++||++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~--~~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ--GKKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee--cCcEEEEEEecCCCC
Confidence 588999999999976 488999999975432 45567888999999999999999998876 455678889999987
Q ss_pred CHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 237 DFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 237 ~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++.+ +.+++.|+++||+||| +.+++||||+|+||++++++.+|++|||++.
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccch
Confidence 6543 3469999999999999 8999999999999999999999999999754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.3e-23 Score=174.51 Aligned_cols=133 Identities=26% Similarity=0.410 Sum_probs=111.6
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|... +++.+|+|.+.... ......+.+|++++++++|||++++++.+. .....++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFL--EDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEe--cCCEEEEEE
Confidence 4778899999999999999864 57789999987542 334567889999999999999999999876 345678889
Q ss_pred cccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccchhh
Q 036266 231 CVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a~~ 291 (312)
||++++++. ...+++.|+++|++||| +++++||||||+||+++++ +.+|++|||.++.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 999987553 33468899999999999 8999999999999999854 5689999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.7e-23 Score=175.11 Aligned_cols=149 Identities=21% Similarity=0.361 Sum_probs=124.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|+||.||++... ++..+|+|.+.... ....+.+.+|++++++++|+||+++++.+. .....++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~--~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ--ENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec--cCCeEEEEE
Confidence 4677889999999999999975 57889999997642 233456788999999999999999999876 345678888
Q ss_pred cccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhhh---
Q 036266 231 CVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~~--- 292 (312)
||++++++ .....++.|+++|++||| ..+++|+||||+||++++++ .+|++|||.+...
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 89987754 344578999999999999 88999999999999999875 5699999987542
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 203 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE 203 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 888888888888875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-23 Score=175.92 Aligned_cols=150 Identities=28% Similarity=0.459 Sum_probs=122.0
Q ss_pred ccccceEeccCCcEEEEEEEEcC--CcEEEEEEeehh----------hhHhHHHHHHHHHHhhc-CCCCceeeeeeeeee
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLD--ETNVAIKVFNLQ----------LERAFRSFDSKCEVHKN-VRHRNLIKILTTIAI 220 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 220 (312)
+|+..+.||+|+||.||+|.... ++.+|+|.+... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 36778899999999999999764 577999988532 12334557788887765 799999999998874
Q ss_pred cccccEEEEecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc
Q 036266 221 LILKPWYLSSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~ 284 (312)
....+++|||++++++.+ .++++.|++.|+.|||+ ..+++||||||+||+++.++.+|++
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~ 156 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTIT 156 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEe
Confidence 456788889998876543 34688999999999993 2679999999999999999999999
Q ss_pred cccchhhh-----------------------------------hhhhhhhhcCCCCCc
Q 036266 285 DFNISKLL-----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 285 DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|||.+... |++++|+++|+.|+.
T Consensus 157 dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~ 214 (269)
T cd08528 157 DFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFY 214 (269)
T ss_pred cccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccc
Confidence 99987532 888999999988864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=173.08 Aligned_cols=152 Identities=26% Similarity=0.329 Sum_probs=129.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||+|... +++.|++|++.... ....+.+.+|+.++++++||||+++++.+........++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3677889999999999999976 68889999997654 24467788999999999999999999988754336678889
Q ss_pred cccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|+++++++.+ +..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||.+...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9998875543 4569999999999999 899999999999999999999999999965432
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+.+
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSE 205 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999998765
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=174.46 Aligned_cols=145 Identities=21% Similarity=0.259 Sum_probs=117.1
Q ss_pred eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHH-hhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEV-HKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.+|+|++|.||+|... +++.||+|.++... ......+..|..+ ....+|+|++++++++.. ....++++||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEEEEecc
Confidence 46899999999999864 57889999997532 1222334455444 455689999999999873 45688999999
Q ss_pred CCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
+++++.+ ..+++.|+++||.||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 156 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGT 156 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCC
Confidence 9886654 3468999999999999 889999999999999999999999999977531
Q ss_pred -----------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||..|+..
T Consensus 157 ~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 157 PDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred cCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 8899999999999754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=176.44 Aligned_cols=152 Identities=22% Similarity=0.347 Sum_probs=129.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
...+.|+..+.+|+|++|.||+|.+. +++.||+|+++.... ....+.+|++++++++|+|++++++.+... ...++
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l 92 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVG--DELWV 92 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--CEEEE
Confidence 45667888889999999999999976 578899999986543 456788999999999999999999998744 56788
Q ss_pred EecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 229 SSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 229 ~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++||++++++. ++..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 88899977554 34569999999999999 899999999999999999999999999976531
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 170 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~ 217 (286)
T cd06614 170 KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYL 217 (286)
T ss_pred hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCC
Confidence 888888888888864
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-22 Score=178.47 Aligned_cols=149 Identities=23% Similarity=0.260 Sum_probs=123.1
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
|...+.+|+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|||++++++++.. ....+++|
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 100 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--EHTAWLVM 100 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEEEE
Confidence 566678999999999999964 57889999987432 2344567889999999999999999999874 45577888
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||+.+. ++.+.+.++.|++.|++||| +.+++||||||+||++++++.+||+|||++...
T Consensus 101 e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~ 177 (313)
T cd06633 101 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSF 177 (313)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCc
Confidence 888643 34556679999999999999 889999999999999999999999999976531
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+.+
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~ 222 (313)
T cd06633 178 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 222 (313)
T ss_pred cccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=177.69 Aligned_cols=133 Identities=22% Similarity=0.250 Sum_probs=110.5
Q ss_pred ccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILK 224 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 224 (312)
+|+..+.+|+|++|.||++... +++.||||.++... ....+.+.+|+++++++ +||||+++.+.+. ...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~--~~~ 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ--TDT 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee--cCC
Confidence 3677889999999999998743 46789999997532 23345678899999999 5999999998876 345
Q ss_pred cEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 225 PWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..+++|||+++|++.+ ...++.|+++||+||| ..+++||||||+||+++.++.++++|||+++.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 79 KLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 6788999999886543 3458889999999999 89999999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-24 Score=194.86 Aligned_cols=136 Identities=23% Similarity=0.312 Sum_probs=115.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcCC-cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDE-TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..+.|.++..+|.|+||.||+|..++. -..|.|+|..........+.-|+++|+.++||+||++++.|. ....+++.
T Consensus 30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy--~enkLwil 107 (1187)
T KOG0579|consen 30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY--FENKLWIL 107 (1187)
T ss_pred HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh--ccCceEEE
Confidence 345567778899999999999997643 346789998877788889999999999999999999999876 34567788
Q ss_pred ecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.|||.||-. .+..-++.|++.||.||| +.+|||||||..|||++-+|.++++|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeeccccccc
Confidence 889999943 333458999999999999 99999999999999999999999999998754
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=179.25 Aligned_cols=152 Identities=23% Similarity=0.291 Sum_probs=124.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh---hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ---LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...|+..+.+|+|++|.||+|+.. +++.+|+|.+... .....+++.+|++++++++|+|++++.+++.. ....+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 91 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAW 91 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCeeE
Confidence 344777789999999999999975 5778999998642 23344567889999999999999999998874 45677
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+++||+.+. +..+...++.|++.|+.||| +.+++||||||+||+++.++.+|++|||++...
T Consensus 92 lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 888888643 23445578999999999999 889999999999999999999999999976531
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+.+
T Consensus 169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 216 (308)
T cd06634 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (308)
T ss_pred ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence 8888889999888643
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=180.79 Aligned_cols=123 Identities=22% Similarity=0.308 Sum_probs=103.6
Q ss_pred EeccC--CcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccC
Q 036266 160 LLGTE--SLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 160 ~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.||.| +|++||++.+. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.. ....++++||++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~~v~e~~~ 82 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLWVISPFMA 82 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceEEEEeccc
Confidence 45555 89999999975 68899999987532 3344678889999999999999999999874 445788888999
Q ss_pred CCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcccc
Q 036266 235 NGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 235 ~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
++++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+|++||+
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~ 146 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLS 146 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechH
Confidence 8865443 358999999999999 8899999999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-23 Score=182.77 Aligned_cols=135 Identities=21% Similarity=0.322 Sum_probs=113.8
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---cccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~~~ 227 (312)
+|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|+.+++.++||||+++.+++.... ...++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999975 47889999987643 344567889999999999999999999876443 34678
Q ss_pred EEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|+|+++. ++.....++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 889998742 34455679999999999999 88999999999999999999999999997663
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-22 Score=170.50 Aligned_cols=150 Identities=25% Similarity=0.360 Sum_probs=127.6
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|+..+.+|+|++|.||++... +++.+++|++..........+.+|++++++++|+|++++++++... ...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l~~e~ 78 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIVMEF 78 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEEEEEec
Confidence 3677889999999999999975 6788999999876544567889999999999999999999988743 556788889
Q ss_pred cCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 233 MPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 233 ~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
++++++.+ ...++.|++.|++||| ..+++||||+|+||++++++.++|+|||.+...
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 155 (253)
T cd05122 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN 155 (253)
T ss_pred CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccccc
Confidence 98775544 3468999999999999 899999999999999999999999999976542
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 156 ~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 199 (253)
T cd05122 156 TMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSE 199 (253)
T ss_pred ceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888754
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=181.15 Aligned_cols=137 Identities=20% Similarity=0.335 Sum_probs=112.9
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhc--CCCCceeeeeeeeee--cccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKN--VRHRNLIKILTTIAI--LILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~--~~~~~~~ 227 (312)
..+....+.||+|.||.||+|++ .|..||||++....+ +.+.+|.++.+. ++|+||..+++.-.. ..-..++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 34567789999999999999998 577899999986543 445667777654 699999998875322 2235689
Q ss_pred EEecccCCCCHHHHH-----------HHHHHHHHHHHHHhC-----CCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDFPERL-----------NIMIDMALAFEYLHH-----GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~-----~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++.+|-+.|++.+.+ +++..+|.||+|||. ..++.|.|||||+.|||+..++...|+|+|+|-.
T Consensus 286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 999999999886654 799999999999993 4578899999999999999999999999999976
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
.
T Consensus 366 h 366 (513)
T KOG2052|consen 366 H 366 (513)
T ss_pred e
Confidence 4
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=172.47 Aligned_cols=150 Identities=29% Similarity=0.354 Sum_probs=126.4
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|+|++|.||++... +++.+|+|.+.... ......+.+|++++++++|+||+++.+++.. ....++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD--GNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CCEEEEEe
Confidence 4677889999999999999865 67889999987543 3345567889999999999999999988874 36678888
Q ss_pred cccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 231 CVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 231 ~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
||++++++.+ ...++.|++.|++||| +.+++||||||+||++++++.+|++|||+++..
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 9998886643 3468899999999999 899999999999999999999999999977542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~ 203 (256)
T cd08530 156 NMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEA 203 (256)
T ss_pred CCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999888753
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=175.60 Aligned_cols=150 Identities=25% Similarity=0.322 Sum_probs=120.5
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC---CCCceeeeeeeeeeccc---cc
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAILIL---KP 225 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~---~~ 225 (312)
|+..+.+|+|++|.||+|+.. +++.||+|+++... ......+.+|+.+++++ +|||++++++++...+. ..
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999976 47889999997532 22234456677766555 69999999999875432 23
Q ss_pred EEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||+++. ++.+...++.|+++||+||| +.+++|+||||+||++++++.+||+|||.++.+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 78888887632 45566789999999999999 889999999999999999999999999987542
Q ss_pred -----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 158 SFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred cCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 888889999887764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=181.55 Aligned_cols=133 Identities=17% Similarity=0.234 Sum_probs=108.5
Q ss_pred cccc-cceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHh--------------HHHHHHHHHHhhcCCCCceeeeee
Q 036266 153 DEFN-EWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERA--------------FRSFDSKCEVHKNVRHRNLIKILT 216 (312)
Q Consensus 153 ~~~~-~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~~ 216 (312)
++|. ..+.||+|+||.||+|... +++.||||.+....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 3567999999999999965 58889999986532111 124678999999999999999999
Q ss_pred eeeecccccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 217 TIAILILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 217 ~~~~~~~~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
++.. ....+++|||+++. +......++.|++.|++||| +.+|+||||||+||+++.++.+|++|
T Consensus 88 ~~~~--~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVE--GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEec--CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECC
Confidence 9873 45678888898742 33344569999999999999 89999999999999999999999999
Q ss_pred ccchh
Q 036266 286 FNISK 290 (312)
Q Consensus 286 FG~a~ 290 (312)
||.++
T Consensus 163 fg~~~ 167 (335)
T PTZ00024 163 FGLAR 167 (335)
T ss_pred cccee
Confidence 99764
|
|
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.1e-23 Score=183.20 Aligned_cols=155 Identities=22% Similarity=0.317 Sum_probs=127.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--- 223 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 223 (312)
...++|+..+.||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+.++++++|||++++.+++.....
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34667999999999999999999975 57889999986532 2334567789999999999999999887753322
Q ss_pred -ccEEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 224 -KPWYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 224 -~~~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
...+++++|+.+. ++.+...++.|+++|++||| +.+|+||||||+||++++++.+||+|||++...
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 3478888888431 34455679999999999999 899999999999999999999999999987642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|++
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 888899999988875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=180.35 Aligned_cols=134 Identities=20% Similarity=0.301 Sum_probs=108.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-C--CcEEEEEEeehhh--hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec--cccc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-D--ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL--ILKP 225 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~--~~~~ 225 (312)
+|+..+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +||||+++++.+... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3677889999999999999965 3 6789999987532 22345678899999999 499999999875432 2244
Q ss_pred EEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 226 WYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 226 ~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
.+++++++.+. +..+...++.|++.||+||| ..+|+||||||+||++++++.+||+|||+|+
T Consensus 81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 67777777532 44556679999999999999 8899999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=184.80 Aligned_cols=152 Identities=21% Similarity=0.266 Sum_probs=129.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehh--hhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQ--LERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 227 (312)
....|++.+.||+||.+.||++...+.+.||+|++... ..+....|..|+..|.+++ |.+||++++|-. ...++|
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv--~d~~lY 436 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV--TDGYLY 436 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--cCceEE
Confidence 34568899999999999999999888888999887643 2566788999999999996 999999999976 466789
Q ss_pred EEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
|+|||-+- |+. .+..++.|+++|+.++| +.+|||.||||+|+|+-. |.+||+|||+|..+
T Consensus 437 mvmE~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 437 MVMECGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQP 511 (677)
T ss_pred EEeecccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence 99987542 222 44569999999999999 999999999999999954 89999999999886
Q ss_pred -----------------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|+++|+|+-|+.||.+.
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~ 575 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI 575 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH
Confidence 99999999999998764
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=176.26 Aligned_cols=148 Identities=24% Similarity=0.342 Sum_probs=123.3
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.+|+|++|.||+|... +++.+|+|.++... ......+.+|++++++++|+||+++++++.. ....++++|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCCEEEEEe
Confidence 566789999999999999965 67889999987543 2345677889999999999999999998874 456788888
Q ss_pred ccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 232 VMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 232 ~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
|+++. ++.++..++.|++.|+.||| ..+|+|+||||+||++++++.+|++|||.+...
T Consensus 79 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~ 155 (283)
T cd05118 79 FMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPY 155 (283)
T ss_pred ccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccc
Confidence 88752 34455679999999999999 889999999999999999999999999976322
Q ss_pred ------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||+.|++
T Consensus 156 ~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 200 (283)
T cd05118 156 THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP 200 (283)
T ss_pred cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 788888888888774
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=178.81 Aligned_cols=125 Identities=22% Similarity=0.294 Sum_probs=101.3
Q ss_pred EeccCCcEEEEEEEEcCCcEEEEEEeehh--hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC
Q 036266 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQ--LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD 237 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~ 237 (312)
..|.|+++.||++.. +++.||||++... .....+.+.+|++++++++||||+++++++.. ....+++|||+++|+
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~~~e~~~~~~ 85 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYVVSPLMAYGS 85 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEEEEeccCCCC
Confidence 344455555555443 6889999999764 24455678999999999999999999998874 445788888999886
Q ss_pred HHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 238 FPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 238 ~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+.+. ..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+.
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~ 149 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSV 149 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccce
Confidence 5443 358999999999999 8899999999999999999999999999663
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=171.45 Aligned_cols=152 Identities=24% Similarity=0.291 Sum_probs=118.3
Q ss_pred HHhhhccccccceEe--ccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 147 DILQATDEFNEWHLL--GTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 147 ~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
+.....+.|+..+.+ |+|+||.||++..+ +++.+|+|.+....... . |+.....+ +||||+++++++...
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~- 81 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTL- 81 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecC-
Confidence 334445566666665 99999999999964 57889999987542111 1 22222212 699999999998744
Q ss_pred cccEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccch
Q 036266 223 LKPWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNIS 289 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a 289 (312)
...+++|||++++++.+ ...++.|+++|++||| +.+++||||||+||+++.++ .++++|||++
T Consensus 82 -~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 82 -KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred -CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 46889999999886654 3469999999999999 88999999999999999888 9999999987
Q ss_pred hhh--------------------------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL--------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~--------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.. |++++|+++|+.|+..
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 542 8899999999999853
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=169.69 Aligned_cols=150 Identities=27% Similarity=0.404 Sum_probs=127.3
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+|+..+.+|.|++|.||++... +++.||+|++.... ....+.+.+|++++++++|||++++.+.+... ...++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CEEEEEE
Confidence 4777889999999999999975 57889999997643 24566788999999999999999999988743 5678888
Q ss_pred cccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 231 CVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 231 ~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
|+++++++.+ ...++.++++|+.||| +.+++|+||+|+||++++++.++++|||.+...
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 8998876543 3468999999999999 889999999999999999999999999987542
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+..
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 205 (258)
T cd08215 156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEG 205 (258)
T ss_pred CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCC
Confidence 7888889999888743
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-22 Score=173.59 Aligned_cols=133 Identities=30% Similarity=0.441 Sum_probs=113.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 227 (312)
++|...+.+|+|++|.||+|... +++.||+|++.... ....+.+.+|.+++++++ ||||+++++++. .....+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--~~~~~~ 78 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ--DEENLY 78 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--CCceEE
Confidence 36788899999999999999975 68899999997632 233466788999999998 999999999876 445678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++||+++++++.+ ...++.|++.|++||| +.+++|+||||+||+++.++.++++|||++.
T Consensus 79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~ 150 (280)
T cd05581 79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAK 150 (280)
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCcccc
Confidence 8999998886643 4569999999999999 8899999999999999999999999999755
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-24 Score=186.95 Aligned_cols=151 Identities=23% Similarity=0.301 Sum_probs=130.2
Q ss_pred cccccceEeccCCcEEEEEEEEcCCc-EEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDET-NVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.+++....+|-|+||.|-.+...... .+|+|++++.. ....+.+..|-++|.+.+.|.||++|-.|. +..++||
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfr--d~kyvYm 497 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFR--DSKYVYM 497 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhc--cchhhhh
Confidence 45566778999999999988865433 48999998754 233345677899999999999999999887 6778899
Q ss_pred EecccCCCCHHHHHH------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPERLN------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~~------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
.||.|-+|++.+.++ ++..+.+|++||| +++||.|||||+|.++|.+|.+||.|||+|+.+
T Consensus 498 LmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999998877663 8899999999999 999999999999999999999999999999996
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+..+|++||.+||..
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG 621 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 8999999999999864
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-23 Score=180.30 Aligned_cols=141 Identities=26% Similarity=0.426 Sum_probs=115.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh--h-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ--L-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
...++|-..+++|+|+|+.||+|.+- ..+.||||+-... . +...+...+|.++.+.|+||-||++|++|..
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl- 538 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL- 538 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee-
Confidence 34456777889999999999999854 4667999986432 1 2234556789999999999999999999975
Q ss_pred ccccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccc
Q 036266 222 ILKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDF 286 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DF 286 (312)
+...+|-+.|||++.|+.-.+ .|+.||+.||.||.+- +++|||-||||.|||+. .-|.+||.||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 344577888899999775433 5999999999999965 78999999999999994 4578999999
Q ss_pred cchhhh
Q 036266 287 NISKLL 292 (312)
Q Consensus 287 G~a~~~ 292 (312)
|+++++
T Consensus 618 GLSKIM 623 (775)
T KOG1151|consen 618 GLSKIM 623 (775)
T ss_pred chhhhc
Confidence 999996
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-24 Score=174.57 Aligned_cols=158 Identities=17% Similarity=0.295 Sum_probs=120.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---ccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~ 225 (312)
..+.+..+.||-|+||.||.+.+. +|+.||+|++..-. -...+.+.+|++++..++|.|+...++...... ...
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 131 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHH
Confidence 345566789999999999999864 78999999987532 234567889999999999999999888764322 123
Q ss_pred EEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+|.+.|.|... +-....-+..||++||.||| +.+|.||||||.|.|++.+...||+|||+|+.-
T Consensus 132 iYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 132 LYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 45555555432 22233347899999999999 889999999999999999999999999999885
Q ss_pred ---hhhhhhhhcCCCCCcccccC
Q 036266 293 ---GVLLPETFTRKKPTIEMIIG 312 (312)
Q Consensus 293 ---g~~~~e~~tg~~p~~e~~~~ 312 (312)
--|--|++|..|.+||+++|
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMG 231 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMG 231 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhc
Confidence 34555666666666666654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-22 Score=166.36 Aligned_cols=127 Identities=15% Similarity=0.111 Sum_probs=97.3
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhH--h------------------------HHHHHHHHHHhhcCCCCce
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLER--A------------------------FRSFDSKCEVHKNVRHRNL 211 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni 211 (312)
...||+|++|.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3578999999999999878999999999754211 0 0122348999999988776
Q ss_pred eeeeeeeeecccccEEEEecccCCCCH------------HHHHHHHHHHHHHHHHH-hCCCCCCceecCCCCCCeeeCCC
Q 036266 212 IKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYL-HHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 212 v~~~~~~~~~~~~~~~l~~~~~~~g~~------------~~~~~i~~~i~~~l~yl-H~~~~~~iiHrDlkp~Nill~~~ 278 (312)
.....+.. ...+++|||++++++ .+..+++.|++.+++|+ | ..+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~----~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL----KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe----cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-C
Confidence 44332211 123788999987643 34557999999999999 6 78999999999999998 4
Q ss_pred CceEEccccchhhh
Q 036266 279 MVAHVSDFNISKLL 292 (312)
Q Consensus 279 ~~~kl~DFG~a~~~ 292 (312)
+.++++|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-22 Score=173.62 Aligned_cols=147 Identities=21% Similarity=0.279 Sum_probs=121.1
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.||+|++|.||+|... +++.||||++..... .......+|+..+++++ |||++++++++.. ....+++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE--NDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc--CCcEEEEEe
Confidence 566789999999999999976 477899999875432 12233457899999999 9999999999874 556788888
Q ss_pred ccCCCC--------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 232 VMPNGD--------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 232 ~~~~g~--------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|+ +|+ +.+.+.++.|++.|+.||| +.+++|+||||+||++++++.++|+|||+++..
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 98 443 3445679999999999999 889999999999999999999999999977532
Q ss_pred -------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|++
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~ 200 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP 200 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence 888889999888774
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5e-23 Score=190.44 Aligned_cols=149 Identities=28% Similarity=0.392 Sum_probs=126.6
Q ss_pred cccceEeccCCcEEEEEEEE-cCCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 155 FNEWHLLGTESLGSVYKWIF-LDET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
....+.||+|+||+||+|.+ +.|+ +||+|++.... .+...++..|+-+|.+++|||++++++++.... +.+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~---~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST---LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch---HHH
Confidence 45567999999999999985 3443 49999987644 456688999999999999999999999997544 567
Q ss_pred EecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 229 SSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+.+||+.|.+.+.+ .|..|||+|+.||| .+++|||||-.+|||+..-..+|+.|||+|+..
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 77899999776543 59999999999999 899999999999999999999999999999986
Q ss_pred -----------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -----------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -----------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|+..||++| |..|+..+
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi 904 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI 904 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence 889999877 67777654
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-22 Score=173.45 Aligned_cols=132 Identities=27% Similarity=0.346 Sum_probs=111.0
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
|+..+.+|+|++|.||+|... +++.||+|.+.... ....+.+..|+.++++++|+|++++++++.. ....++++|
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCceEEEec
Confidence 455678999999999999975 48889999998653 3334567889999999999999999998874 356788888
Q ss_pred ccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 232 VMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 232 ~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|+++. ++.++.+++.|++.|++||| +.+|+||||+|+||++++++.+||+|||.++.
T Consensus 79 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~ 147 (282)
T cd07829 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARA 147 (282)
T ss_pred CcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccc
Confidence 88732 34455679999999999999 88999999999999999999999999998754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-22 Score=184.63 Aligned_cols=160 Identities=21% Similarity=0.288 Sum_probs=133.9
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec--
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL-- 221 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~-- 221 (312)
..+...++.|++...+|.|.+|.||+++. ++++.+|+|+.....+. .+++..|.++++.. .|||++.+++++.-.
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~ 90 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDP 90 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecC
Confidence 34445677889999999999999999995 46888999998876433 35677888998877 599999999998532
Q ss_pred -ccccEEEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 222 -ILKPWYLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 222 -~~~~~~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
....+|+|||||.+|+..+.+ .|.+.++.|+.+|| ...++|||||-.|||++.++.+|+.||
T Consensus 91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeee
Confidence 345699999999999654433 48899999999999 899999999999999999999999999
Q ss_pred cchhhh-----------------------------------------hhhhhhhhcCCCCCccc
Q 036266 287 NISKLL-----------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 287 G~a~~~-----------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|.+..+ |+.+.||..|.+|.-+|
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 998875 88888999998887654
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=161.28 Aligned_cols=127 Identities=16% Similarity=0.083 Sum_probs=100.9
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhH--------------------------hHHHHHHHHHHhhcCCCCce
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLER--------------------------AFRSFDSKCEVHKNVRHRNL 211 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~ni 211 (312)
...||+|++|.||+|...+|+.||||+++..... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999778999999999754210 01223578899999999987
Q ss_pred eeeeeeeeecccccEEEEecccCCCCH------------HHHHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCC
Q 036266 212 IKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 212 v~~~~~~~~~~~~~~~l~~~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~ 278 (312)
.....+... ..+++|||++++++ .+..+++.|++.++.++| . .+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK----KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec----CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-C
Confidence 554443321 23788999987632 345679999999999999 7 8999999999999999 7
Q ss_pred CceEEccccchhhh
Q 036266 279 MVAHVSDFNISKLL 292 (312)
Q Consensus 279 ~~~kl~DFG~a~~~ 292 (312)
+.++++|||+|+..
T Consensus 154 ~~~~liDFG~a~~~ 167 (190)
T cd05145 154 GKPYIIDVSQAVEL 167 (190)
T ss_pred CCEEEEEcccceec
Confidence 89999999999875
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-21 Score=166.59 Aligned_cols=142 Identities=30% Similarity=0.375 Sum_probs=119.7
Q ss_pred eccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCC
Q 036266 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
+|+|++|.||++... +++.+|+|.+..... .....+..|++++++++||||+++++.+. .....+++||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ--TEEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee--cCCeeEEEEecCCCC
Confidence 589999999999975 578899999876432 24457888999999999999999998876 455678888899877
Q ss_pred CHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------
Q 036266 237 DFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------ 292 (312)
Q Consensus 237 ~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------ 292 (312)
++. ....++.|+++|+.|+| +.+++|+||||+||+++.++.++++|||.+...
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~ 155 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCG 155 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcC
Confidence 554 34568999999999999 899999999999999999999999999987432
Q ss_pred ------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 194 (250)
T cd05123 156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFY 194 (250)
T ss_pred CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 788888888888874
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.9e-22 Score=182.19 Aligned_cols=149 Identities=17% Similarity=0.218 Sum_probs=112.8
Q ss_pred hccccccceEeccCCcEEEEEEEE-----------------cCCcEEEEEEeehhhhHhHHH--------------HHHH
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-----------------LDETNVAIKVFNLQLERAFRS--------------FDSK 199 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~e 199 (312)
..++|+..+.||+|+||.||+|.. ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 134579999987543222222 3346
Q ss_pred HHHhhcCCCCce-----eeeeeeeeec------ccccEEEEecccCCCCHHH----------------------------
Q 036266 200 CEVHKNVRHRNL-----IKILTTIAIL------ILKPWYLSSCVMPNGDFPE---------------------------- 240 (312)
Q Consensus 200 ~~~l~~l~h~ni-----v~~~~~~~~~------~~~~~~l~~~~~~~g~~~~---------------------------- 240 (312)
+.++.+++|.++ ++++++|... .....++++||++++++.+
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766654 5666766432 1235788999999875533
Q ss_pred --------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------------hhhhh
Q 036266 241 --------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------------GVLLP 297 (312)
Q Consensus 241 --------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------------g~~~~ 297 (312)
...++.|++.|+.|+| +.+|+||||||+||+++.++.+||+|||+++.. +|++|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 2347899999999999 889999999999999999999999999998653 47888
Q ss_pred hhhcC
Q 036266 298 ETFTR 302 (312)
Q Consensus 298 e~~tg 302 (312)
|++..
T Consensus 380 E~l~~ 384 (507)
T PLN03224 380 EELVM 384 (507)
T ss_pred hhhcC
Confidence 87754
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-22 Score=174.29 Aligned_cols=153 Identities=22% Similarity=0.295 Sum_probs=126.1
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
...+|.....+|+|+||.|..|..+. ...+|||+++++. ..+.+--+.|-++|+-. +-|.++++..+|... ..
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm--DR 424 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM--DR 424 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh--hh
Confidence 34568888999999999999998653 4569999998764 22233334566676655 478899998888744 45
Q ss_pred EEEEecccCCCCHHHHHH------------HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPERLN------------IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~~------------i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+|++|||+.+||+.-.++ +|.+||-||-||| +++||.||||..||++|.+|.+||+|||+++.-
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccc
Confidence 788899999999865543 8999999999999 999999999999999999999999999998873
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+.|+.||++
T Consensus 502 ~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 502 FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999964
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-22 Score=165.29 Aligned_cols=152 Identities=19% Similarity=0.303 Sum_probs=124.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeee-eeecccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTT-IAILILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~-~~~~~~~~~ 226 (312)
...+.|.+.+.+|+|.||.+-.|+++. .+.+|+|-+.... ...++|.+|..---.| .|.||+.-|+. |+. ...+
T Consensus 21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt--~d~Y 97 (378)
T KOG1345|consen 21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT--SDAY 97 (378)
T ss_pred chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhc--CceE
Confidence 345678899999999999999999864 5679999987653 3446788887655445 48999988765 343 3378
Q ss_pred EEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~~~kl~DFG~a~~~- 292 (312)
++++||+|.||+...+ +++.|++.|+.|+| +.++||||||.+|||+- +..++|++|||..+..
T Consensus 98 vF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred EEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 8999999999987643 69999999999999 99999999999999993 4458999999998774
Q ss_pred -------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++.++||..|+.
T Consensus 175 ~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 175 TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 889999999999985
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=163.97 Aligned_cols=134 Identities=18% Similarity=0.156 Sum_probs=109.1
Q ss_pred CCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCCHHHH-
Q 036266 164 ESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPER- 241 (312)
Q Consensus 164 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~- 241 (312)
|.+|.||++++. +++.||+|.+.... .+.+|...+....||||+++++++.. ....+++|||+++|++.+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l 76 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAEGGKLWSHI 76 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCCCCCHHHHH
Confidence 889999999975 67889999997643 23345555556679999999998874 4567899999999876443
Q ss_pred -----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------------
Q 036266 242 -----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------------ 292 (312)
Q Consensus 242 -----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------------ 292 (312)
..++.|++.|++||| +++|+||||||+||+++.++.++++|||.+...
T Consensus 77 ~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~ 153 (237)
T cd05576 77 SKFLNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEV 153 (237)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcc
Confidence 468999999999999 899999999999999999999999999975432
Q ss_pred ---------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 154 ~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 154 GGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 788888888876643
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-21 Score=165.93 Aligned_cols=148 Identities=20% Similarity=0.279 Sum_probs=116.5
Q ss_pred ccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
+|...+.||+|+||.||++.... +..+++|.++... ......+.+|+.++++++||||+++++++.. ....+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~ 78 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE--RDAFC 78 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc--CCceE
Confidence 46778899999999999998653 3445555554311 2233456778999999999999999998863 44578
Q ss_pred EEecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+++||++++++.. .+.++.|+++|+.||| +.+++|+||||+||++++ +.+|++|||+++.
T Consensus 79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceee
Confidence 8888999876543 3468999999999999 899999999999999975 5699999997653
Q ss_pred h------------------------------------hhhhhhhhcCCCCCc
Q 036266 292 L------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 292 ~------------------------------------g~~~~e~~tg~~p~~ 307 (312)
. |++++|+++|..|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 155 LMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred cCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 2 778888888888764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-21 Score=156.71 Aligned_cols=132 Identities=16% Similarity=0.196 Sum_probs=100.7
Q ss_pred cccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-----CCCceeeeeeeeeecccc-c-EE
Q 036266 155 FNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNV-----RHRNLIKILTTIAILILK-P-WY 227 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~~-~-~~ 227 (312)
+...+.||+|++|.||. +++....+||++........+.+.+|+.+++++ +||||+++++++...... . +.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 44567999999999995 443333479998765444556789999999999 579999999999865432 2 33
Q ss_pred EEecc--cCCCCHHHHH---------HHHHHHHHHH-HHHhCCCCCCceecCCCCCCeeeCC----CCceEEcc-ccchh
Q 036266 228 LSSCV--MPNGDFPERL---------NIMIDMALAF-EYLHHGRSTPMVHCDLKPSNNLLDE----DMVAHVSD-FNISK 290 (312)
Q Consensus 228 l~~~~--~~~g~~~~~~---------~i~~~i~~~l-~ylH~~~~~~iiHrDlkp~Nill~~----~~~~kl~D-FG~a~ 290 (312)
+++|| +++|++.+.+ .++.|++.++ +||| +.+|+||||||+||+++. +..++|+| ||.+.
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred EEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 67888 5577776654 3577888888 9999 899999999999999973 34799999 55544
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 159 ~ 159 (210)
T PRK10345 159 F 159 (210)
T ss_pred e
Confidence 3
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-21 Score=177.20 Aligned_cols=148 Identities=25% Similarity=0.292 Sum_probs=123.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
..+.|.....+|.|+|+.|-.+... +++..|||++.... .+-.+|+.++... +||||+++.+.+. +....|+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~--~~~~~~~ 393 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYE--DGKEIYL 393 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceec--CCceeee
Confidence 3667888888999999999888864 57889999998652 2334567555544 6999999999887 6778899
Q ss_pred EecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee-CCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL-DEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill-~~~~~~kl~DFG~a~~~---- 292 (312)
+||.+.++.+..+ ..|+.+|+.|+.||| +.+|||||+||+|||+ ++.+.++|+|||.++..
T Consensus 394 v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~ 470 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC 470 (612)
T ss_pred eehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence 9999999854433 359999999999999 8999999999999999 58899999999998875
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||++|+.|+.
T Consensus 471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~ 514 (612)
T KOG0603|consen 471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFA 514 (612)
T ss_pred cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccc
Confidence 999999999999874
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-21 Score=180.74 Aligned_cols=144 Identities=20% Similarity=0.228 Sum_probs=102.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-C----CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeee----ec
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-D----ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIA----IL 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~----~~ 221 (312)
..++|+..+.||+|+||.||+|++. + +..||||++...... +....| .++...+.+++.+...+. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 678999988643211 111111 112222233332222211 12
Q ss_pred ccccEEEEecccCCCCHHHH--------------------------------HHHHHHHHHHHHHHhCCCCCCceecCCC
Q 036266 222 ILKPWYLSSCVMPNGDFPER--------------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLK 269 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~--------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlk 269 (312)
.....+++++|++++++.+. ..++.|++.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 44567888899988865432 248899999999999 8899999999
Q ss_pred CCCeeeCC-CCceEEccccchhhh---------------hhhhhhhhc
Q 036266 270 PSNNLLDE-DMVAHVSDFNISKLL---------------GVLLPETFT 301 (312)
Q Consensus 270 p~Nill~~-~~~~kl~DFG~a~~~---------------g~~~~e~~t 301 (312)
|+|||+++ ++.+||+|||+|+.+ +|++||.+.
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~ 330 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI 330 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence 99999985 689999999999753 688888653
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-20 Score=150.90 Aligned_cols=126 Identities=17% Similarity=0.129 Sum_probs=102.1
Q ss_pred ccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhh----HhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEe
Q 036266 156 NEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE----RAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.....+++|+||+||.+.. .+.+++.+.+..... .....+.+|+++|+++. |+++++++++. ..+++|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------~~~lvm 77 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------GRHLDR 77 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------CEEEEE
Confidence 4567899999999997665 667788777765432 12235789999999996 57898888762 257888
Q ss_pred cccCCCCHHHH-----HHHHHHHHHHHHHHhCCCCCCceecCC-CCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDFPER-----LNIMIDMALAFEYLHHGRSTPMVHCDL-KPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~~~-----~~i~~~i~~~l~ylH~~~~~~iiHrDl-kp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|+.+.++.+. ..++.|++++++++| ..+|+|||| ||+|||++.++.++|+|||+|..
T Consensus 78 eyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 78 SYLAGAAMYQRPPRGDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred eeecCccHHhhhhhhhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 89998887543 358899999999999 999999999 79999999999999999999874
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-20 Score=154.35 Aligned_cols=149 Identities=29% Similarity=0.400 Sum_probs=125.1
Q ss_pred cccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 155 FNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
|...+.+|+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.. ....++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED--PEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec--CCceEEEEec
Confidence 4567899999999999999764 788999999865443 56788899999999999999999998763 3557788889
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
++++++. ....++.+++.++.|+| +.+++|+|++|+||+++.++.++++|||.+...
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~ 155 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAAL 155 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccc
Confidence 8886543 34468899999999999 889999999999999999999999999965522
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 7788888899988865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-21 Score=178.16 Aligned_cols=142 Identities=27% Similarity=0.424 Sum_probs=107.3
Q ss_pred cccceEeccCCcEE-EEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEecc
Q 036266 155 FNEWHLLGTESLGS-VYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 155 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
|...+.+|.|+-|+ ||+|.+ +++.||||++-.. ...-..+|+..|+.-+ |||||++++.-. +..+.|+..|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~--d~qF~YIalEL 584 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQ--DRQFLYIALEL 584 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeecc--CCceEEEEehH
Confidence 44456778888875 899988 5789999998643 3445678999998775 999999877544 55556666555
Q ss_pred cCCC--CH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---C--CceEEccccchhhh
Q 036266 233 MPNG--DF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---D--MVAHVSDFNISKLL 292 (312)
Q Consensus 233 ~~~g--~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~--~~~kl~DFG~a~~~ 292 (312)
|... ++ -..+.+..|++.|+++|| +.+||||||||.||||+. + ..++|+|||+++.+
T Consensus 585 C~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 585 CACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 5321 11 112468899999999999 899999999999999975 2 57999999999986
Q ss_pred -----------------hhhhhhhhcCCCC
Q 036266 293 -----------------GVLLPETFTRKKP 305 (312)
Q Consensus 293 -----------------g~~~~e~~tg~~p 305 (312)
|+++||++.....
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~ 691 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRK 691 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhcccc
Confidence 6777777765544
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-20 Score=152.80 Aligned_cols=137 Identities=12% Similarity=0.131 Sum_probs=112.6
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhh---HhHH------HHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE---RAFR------SFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~------~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
...+|...+.+|.|+||.||.+.. +++.+|||.+..... .... .+.+|++.+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 467899999999999999998655 567899999975432 1112 267899999999999999999886543
Q ss_pred c------cccEEEEecccCCCCHHHHH----HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 222 I------LKPWYLSSCVMPNGDFPERL----NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 222 ~------~~~~~l~~~~~~~g~~~~~~----~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
. ....+++|||+++.++.+.. ....+++.++..+| ..+++|||+||+||+++.++ ++++|||..+.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~ 183 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRC 183 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCccc
Confidence 2 23478999999999886643 35779999999999 99999999999999999888 99999998766
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
.
T Consensus 184 ~ 184 (232)
T PRK10359 184 T 184 (232)
T ss_pred c
Confidence 4
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=8e-22 Score=178.95 Aligned_cols=138 Identities=20% Similarity=0.341 Sum_probs=120.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
...++|.....+|+|++|.|||+++. .++..|+|+++.....+......|+-+++..+|||||.+++.+.. ...+++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr--~dklwi 89 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR--RDKLWI 89 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh--hcCcEE
Confidence 45678999999999999999999965 578899999998877777788899999999999999999998874 445778
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.||||.+|++.+. -.+.+...+|+.|+| ..+-+|||||-.||++++.|.+|++|||.+..+
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqi 162 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQI 162 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhh
Confidence 8889999976543 247799999999999 899999999999999999999999999998776
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-19 Score=149.44 Aligned_cols=131 Identities=14% Similarity=0.046 Sum_probs=104.3
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhh----------------------HhHHHHHHHHHHhhcCCCCc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE----------------------RAFRSFDSKCEVHKNVRHRN 210 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~n 210 (312)
..|...+.||+|+||.||++..++|+.||||+++.... .....+..|..++.++.|++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 34777789999999999999987899999998764320 01123567888888888774
Q ss_pred --eeeeeeeeeecccccEEEEecccCCCCHHHHH------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceE
Q 036266 211 --LIKILTTIAILILKPWYLSSCVMPNGDFPERL------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAH 282 (312)
Q Consensus 211 --iv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~k 282 (312)
+.+.++. ...+++|||++++++.... +++.+++.++.++| ..+|+||||||+||++++++.++
T Consensus 95 i~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 95 FPVPKPIDW------NRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCCceeec------CCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEE
Confidence 3333332 2347889999998875544 58999999999999 89999999999999999999999
Q ss_pred Eccccchhhh
Q 036266 283 VSDFNISKLL 292 (312)
Q Consensus 283 l~DFG~a~~~ 292 (312)
|+|||.|...
T Consensus 166 liDfg~~~~~ 175 (198)
T cd05144 166 IIDWPQMVST 175 (198)
T ss_pred EEECCccccC
Confidence 9999999665
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.2e-20 Score=147.69 Aligned_cols=153 Identities=19% Similarity=0.171 Sum_probs=120.5
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCC-CceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRH-RNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~l 228 (312)
....|...+.||+|+||.+|.|.. .+|..||||+-..... ..++..|.++.+.+++ ..|..+..+.. ...+-++
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~--e~~ynvl 88 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGT--EKDYNVL 88 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhcc--cccccee
Confidence 446789999999999999999994 5789999998765432 2456778888888875 56666665554 3344577
Q ss_pred EecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccchhhh-
Q 036266 229 SSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNISKLL- 292 (312)
Q Consensus 229 ~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a~~~- 292 (312)
+|+..... +..+.+-.+-|++.-++|+| .++.|||||||+|+|..- -..+.++|||+|+.+
T Consensus 89 VMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 89 VMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred eeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 77765322 44556678999999999999 889999999999999962 346889999999997
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCcccc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTIEMI 310 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~e~~ 310 (312)
||++...-.|..||.++.
T Consensus 166 d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 166 DIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred cccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 888888999999988764
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-20 Score=155.66 Aligned_cols=153 Identities=20% Similarity=0.269 Sum_probs=126.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
..++|...+.||+|+|+.|..+++. +.+.+|+|++++.. .++......|-.+..+. +||.+|-+..+|..+ ..
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte--sr 325 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE--SR 325 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc--ce
Confidence 3467899999999999999999965 57889999998754 34555666776666555 599999999998854 44
Q ss_pred EEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++.||+++|++.- ..-+...|+.||.||| +++||.||+|..|||+|..|.+|+.|+|+++.-
T Consensus 326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 566666999997631 1237899999999999 999999999999999999999999999998773
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.||..|+.||+-
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 8899999999999863
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-19 Score=171.20 Aligned_cols=136 Identities=25% Similarity=0.403 Sum_probs=113.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc----C----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCC-CCceeeeeeeeee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL----D----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAI 220 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 220 (312)
..++....+.+|+|.||.|++|... . ...||||..+... ....+.+..|+++|+.+. |+||+.++|++..
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3344455669999999999999843 1 2359999998644 345678999999999985 9999999999875
Q ss_pred cccccEEEEecccCCCCHH----------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCC
Q 036266 221 LILKPWYLSSCVMPNGDFP----------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSN 272 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~----------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~N 272 (312)
....++++||+..|++. +.+.++.|||.|++||+ +.++||||+-.+|
T Consensus 374 --~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRN 448 (609)
T KOG0200|consen 374 --DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARN 448 (609)
T ss_pred --CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhh
Confidence 56678888899988543 33468999999999999 8999999999999
Q ss_pred eeeCCCCceEEccccchhh
Q 036266 273 NLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 273 ill~~~~~~kl~DFG~a~~ 291 (312)
||+.++..+||+|||+|+.
T Consensus 449 VLi~~~~~~kIaDFGlar~ 467 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARD 467 (609)
T ss_pred EEecCCCEEEEccccceec
Confidence 9999999999999999985
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.80 E-value=4e-19 Score=150.03 Aligned_cols=139 Identities=31% Similarity=0.396 Sum_probs=116.9
Q ss_pred CcEEEEEEEEc-CCcEEEEEEeehhhhHh-HHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCCHHH--
Q 036266 165 SLGSVYKWIFL-DETNVAIKVFNLQLERA-FRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPE-- 240 (312)
Q Consensus 165 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~-- 240 (312)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++... ...++++|+++++++.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCCHHHHH
Confidence 58999999976 47889999998654333 67889999999999999999999988743 45778888998865544
Q ss_pred ----------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------------
Q 036266 241 ----------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------------ 292 (312)
Q Consensus 241 ----------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------------ 292 (312)
...++.++++++.||| +.+++|+||+|+||++++++.++++|||.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p 155 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAP 155 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCH
Confidence 4579999999999999 889999999999999999999999999986642
Q ss_pred -----------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+..
T Consensus 156 E~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 156 EVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred HHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 7788888888888754
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-20 Score=155.70 Aligned_cols=156 Identities=24% Similarity=0.320 Sum_probs=117.9
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----cccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~ 225 (312)
.+|.....++.|.- .|..+.+. .++.||+|+..... ....++..+|..++..+.|+||++++.+|.-. ....
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34555566777776 45445432 57889999886432 34566778999999999999999999987422 2345
Q ss_pred EEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhhh---
Q 036266 226 WYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG--- 293 (312)
Q Consensus 226 ~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~g--- 293 (312)
.|++||+|+.. |-.+.-.+..|++.|++|+| +.+|+||||||+||++..++.+||.|||+|+.-+
T Consensus 96 ~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~ 172 (369)
T KOG0665|consen 96 VYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDF 172 (369)
T ss_pred HHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCccc
Confidence 78999998753 33334469999999999999 9999999999999999999999999999998852
Q ss_pred hhhhhhhcCCCCCcccccC
Q 036266 294 VLLPETFTRKKPTIEMIIG 312 (312)
Q Consensus 294 ~~~~e~~tg~~p~~e~~~~ 312 (312)
.+-+.+.|+.+.+||.+.|
T Consensus 173 ~mtpyVvtRyyrapevil~ 191 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILG 191 (369)
T ss_pred ccCchhheeeccCchheec
Confidence 3445666666666666543
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-19 Score=148.54 Aligned_cols=129 Identities=16% Similarity=0.085 Sum_probs=100.4
Q ss_pred ccccceEeccCCcEEEEEEE--EcCCcEEEEEEeehhhh------------------------HhHHHHHHHHHHhhcCC
Q 036266 154 EFNEWHLLGTESLGSVYKWI--FLDETNVAIKVFNLQLE------------------------RAFRSFDSKCEVHKNVR 207 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 207 (312)
.|...+.||+|++|.||+|. ..+|+.||+|+++.... .....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788899999999999998 45789999999875321 01123568999999997
Q ss_pred CCc--eeeeeeeeeecccccEEEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCC-ceecCCCCCC
Q 036266 208 HRN--LIKILTTIAILILKPWYLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTP-MVHCDLKPSN 272 (312)
Q Consensus 208 h~n--iv~~~~~~~~~~~~~~~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~-iiHrDlkp~N 272 (312)
+.. +.+++++ ...+++|||++++++. +...++.|++.+++|+| ..+ |+||||||+|
T Consensus 109 ~~~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe------cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhh
Confidence 533 3333332 1236888899886432 23579999999999999 888 9999999999
Q ss_pred eeeCCCCceEEccccchhhh
Q 036266 273 NLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 273 ill~~~~~~kl~DFG~a~~~ 292 (312)
|+++ ++.++++|||.|+..
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 889999999999865
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=144.28 Aligned_cols=127 Identities=13% Similarity=0.122 Sum_probs=103.3
Q ss_pred eEeccCCcEEEEEEEEcCCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
+.||+|++|.||+|.+ .+..+++|...... ......+.+|++++..++|+++.....++.. ....+++|
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--PENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--CCCCEEEE
Confidence 4789999999999987 66789999765321 1123457789999999999998777666543 33467888
Q ss_pred cccCCCCHHHHH--------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 231 CVMPNGDFPERL--------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 231 ~~~~~g~~~~~~--------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
||++++++.+.+ .++.+++.++.++| ..+++|||++|+||+++ ++.++++|||.++..
T Consensus 79 e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 79 EYIEGEPLKDLINSNGMEELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 999998876543 79999999999999 89999999999999999 788999999998763
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-19 Score=157.92 Aligned_cols=140 Identities=16% Similarity=0.170 Sum_probs=110.6
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC------CCceeeeeeeee
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR------HRNLIKILTTIA 219 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~ 219 (312)
-.+.....|.+....|+|.|++|.+|.+. .|+.||||+|... +...+.-..|+++|++|. --++++++-.|.
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~ 504 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK 504 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence 33455678888899999999999999964 5788999999865 344455678999999995 247778877766
Q ss_pred ecccccEEEEecccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEc
Q 036266 220 ILILKPWYLSSCVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVS 284 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~ 284 (312)
...++|||+|-+.-. .+..+..++.|+.-||..|- .++|+|.||||.|||+++ ...+|||
T Consensus 505 --hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLC 579 (752)
T KOG0670|consen 505 --HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLC 579 (752)
T ss_pred --hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeec
Confidence 455678886654321 33444569999999999999 999999999999999985 5579999
Q ss_pred cccchhhh
Q 036266 285 DFNISKLL 292 (312)
Q Consensus 285 DFG~a~~~ 292 (312)
|||.|...
T Consensus 580 DfGSA~~~ 587 (752)
T KOG0670|consen 580 DFGSASFA 587 (752)
T ss_pred cCcccccc
Confidence 99998875
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=142.77 Aligned_cols=126 Identities=14% Similarity=0.104 Sum_probs=100.8
Q ss_pred EeccCCcEEEEEEEEcCCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.||+|++|.||+|.+ ++..|++|...... ......+.+|+++++.++|+++.....++.. ....+++||
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD--PDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE--CCCCEEEEE
Confidence 379999999999985 56789999864321 1123557789999999998876554444332 234578889
Q ss_pred ccCCCCHHHHH-----HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 232 VMPNGDFPERL-----NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 232 ~~~~g~~~~~~-----~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|++++++.+.+ .++.++++++.++| +.+++|||+||+||+++ ++.++++|||+++..
T Consensus 78 ~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 78 YIEGKPLKDVIEEGNDELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EECCccHHHHHhhcHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999887655 68999999999999 89999999999999999 789999999998764
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.7e-19 Score=153.21 Aligned_cols=136 Identities=17% Similarity=0.218 Sum_probs=107.0
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCC------ceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHR------NLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~~~ 223 (312)
...+|.+...+|+|+||.|-++.+. .+..||||+++.- ....+...-|+++++++.+. -+|++.+||. ..
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd--yr 163 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFD--YR 163 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh--cc
Confidence 3678999999999999999999865 4677999999753 44556677899999999432 3677777776 34
Q ss_pred ccEEEEecccC--------CC-----CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-------------
Q 036266 224 KPWYLSSCVMP--------NG-----DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE------------- 277 (312)
Q Consensus 224 ~~~~l~~~~~~--------~g-----~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~------------- 277 (312)
.+++++.|.+. .+ .+.+...++.|++++++||| +.+++|-||||+|||+.+
T Consensus 164 ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 164 GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCcc
Confidence 56677766654 21 45667789999999999999 999999999999999821
Q ss_pred -------CCceEEccccchhhh
Q 036266 278 -------DMVAHVSDFNISKLL 292 (312)
Q Consensus 278 -------~~~~kl~DFG~a~~~ 292 (312)
+..+||+|||.|+.-
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~ 262 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFD 262 (415)
T ss_pred ceeccCCCcceEEEecCCccee
Confidence 235799999999874
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.1e-18 Score=162.83 Aligned_cols=133 Identities=16% Similarity=0.110 Sum_probs=104.0
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEee-hh-------hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFN-LQ-------LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~-~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
..|...+.||+|+||.||++.+... .+++|+.. +. .......+.+|++++++++|++++....++.. ..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--PE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe--CC
Confidence 3445678999999999999987543 34444321 11 01223567899999999999999887666553 23
Q ss_pred cEEEEecccCCCCHHHH----HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPER----LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~----~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..+++|||++++++.+. ..++.++++++.|+| +.+++|||+||+||++ +++.++++|||+|+..
T Consensus 410 ~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 45788899999998774 468999999999999 8999999999999999 5789999999999874
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.76 E-value=2e-17 Score=136.23 Aligned_cols=127 Identities=31% Similarity=0.469 Sum_probs=107.4
Q ss_pred eccCCcEEEEEEEEcC-CcEEEEEEeehhhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCCH
Q 036266 161 LGTESLGSVYKWIFLD-ETNVAIKVFNLQLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDF 238 (312)
Q Consensus 161 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~ 238 (312)
+|+|.+|.||++.... ++.+++|++...... ....+.+|++.++.++|++++++++++... ...++++|+++++++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecCCCCcH
Confidence 5899999999999754 788999999865432 346789999999999999999999988743 556788889886654
Q ss_pred H-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchhhh
Q 036266 239 P-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISKLL 292 (312)
Q Consensus 239 ~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~~~ 292 (312)
. .+..++.+++++++||| +.+++|+||+|.||+++. ++.++++|||.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~ 143 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLL 143 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEc
Confidence 3 34568999999999999 889999999999999998 899999999988644
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-17 Score=147.67 Aligned_cols=133 Identities=21% Similarity=0.251 Sum_probs=102.9
Q ss_pred ccccceEeccCCcEEEEEEEEcCC--cEEEEEEeehhhhHhHHHHHHHHHHhhcCCC----CceeeeeeeeeecccccEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDE--TNVAIKVFNLQLERAFRSFDSKCEVHKNVRH----RNLIKILTTIAILILKPWY 227 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 227 (312)
.|.+.+.||+|+||.||.|..... ..+|+|............+..|+.++..+.. +++..+++... ....+-+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-STEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc-CCCceeE
Confidence 799999999999999999997553 4689998876433322367788888888863 57777777763 2333445
Q ss_pred EEecccCC-----------C--CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-----CceEEccccch
Q 036266 228 LSSCVMPN-----------G--DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-----MVAHVSDFNIS 289 (312)
Q Consensus 228 l~~~~~~~-----------g--~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-----~~~kl~DFG~a 289 (312)
++|..+.. + +..+.++|+.|++.+|+++| +.+++||||||+|+++... ..+.+.|||+|
T Consensus 98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 66554321 1 56677889999999999999 9999999999999999754 46899999999
Q ss_pred h
Q 036266 290 K 290 (312)
Q Consensus 290 ~ 290 (312)
+
T Consensus 175 r 175 (322)
T KOG1164|consen 175 R 175 (322)
T ss_pred c
Confidence 8
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.3e-18 Score=147.63 Aligned_cols=138 Identities=20% Similarity=0.206 Sum_probs=113.8
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecc
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILI 222 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 222 (312)
+....+.|..++.||+|.|++||++.+. .++.||+|.+.... ....+..|++.|..+. +.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4455677899999999999999999853 34669999997643 3355889999999986 899999999887444
Q ss_pred cccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccccchhhh
Q 036266 223 LKPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL 292 (312)
Q Consensus 223 ~~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~ 292 (312)
..+++++|++.. ++.+...+++.+..||+++| ..+||||||||.|+|.+ ..+.-.|.|||+|...
T Consensus 109 --~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 109 --QVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred --eeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHH
Confidence 456777788866 45566679999999999999 99999999999999998 5678899999999853
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-17 Score=139.54 Aligned_cols=154 Identities=18% Similarity=0.172 Sum_probs=119.7
Q ss_pred hhccccccceEeccCCcEEEEEEE-EcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 227 (312)
..--.|.+.+.||+|+||.++.|+ .-+++.||||.-.... ...++..|.+..+.|. .++|..+|-+.. ...+-.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGq--eG~~Ni 100 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQ--EGKYNI 100 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeecc--ccchhh
Confidence 344579999999999999999998 4578899999876543 3345677888887775 578887765544 333334
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-----CceEEccccchh
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-----MVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-----~~~kl~DFG~a~ 290 (312)
+++|..... ++.+...+|.|++.-++|+| ++..|.|||||+|+||... ..+.++|||+|+
T Consensus 101 LVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 101 LVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 555544221 55666789999999999999 8999999999999999633 358899999999
Q ss_pred hh-------------------------------------------hhhhhhhhcCCCCCcccc
Q 036266 291 LL-------------------------------------------GVLLPETFTRKKPTIEMI 310 (312)
Q Consensus 291 ~~-------------------------------------------g~~~~e~~tg~~p~~e~~ 310 (312)
.+ |-+....+.|..||.++-
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 97 888899999999998764
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-17 Score=135.25 Aligned_cols=125 Identities=17% Similarity=0.124 Sum_probs=91.1
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhH--hHHH----------------------HHHHHHHhhcCCCCc--e
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLER--AFRS----------------------FDSKCEVHKNVRHRN--L 211 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 211 (312)
.+.||+|+||.||+|...+++.||||+++..... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 3578999999999999878899999998753211 1111 124455555554332 2
Q ss_pred eeeeeeeeecccccEEEEecccCCC-----CH------HHHHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCC
Q 036266 212 IKILTTIAILILKPWYLSSCVMPNG-----DF------PERLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDM 279 (312)
Q Consensus 212 v~~~~~~~~~~~~~~~l~~~~~~~g-----~~------~~~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~ 279 (312)
.+.++. ...+++|||++++ .+ .+..+++.+++.++.++| . ++|+||||||+||+++ ++
T Consensus 82 ~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL------NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec------CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE-CC
Confidence 333322 1347888999984 22 334579999999999999 7 8999999999999999 89
Q ss_pred ceEEccccchhhh
Q 036266 280 VAHVSDFNISKLL 292 (312)
Q Consensus 280 ~~kl~DFG~a~~~ 292 (312)
.++++|||.|...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-17 Score=145.14 Aligned_cols=123 Identities=19% Similarity=0.211 Sum_probs=101.4
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-----C---Cceeeeeeeeee--
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-----H---RNLIKILTTIAI-- 220 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~-- 220 (312)
..+|.+.+.+|.|-|++||.|.+.. .+-||+|+.+.. ....+....||++|++++ | ..||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 4678999999999999999999764 567999999864 455667788999999884 2 379999999864
Q ss_pred cccccEEEEecccCC-------------CCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 221 LILKPWYLSSCVMPN-------------GDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~-------------g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
+...+++||+|++.. -.+..+.+|++||+.||.|||. +.+|||-||||+|||+..
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCS 223 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeec
Confidence 456789999987642 2566677899999999999997 569999999999999953
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.6e-16 Score=134.38 Aligned_cols=130 Identities=14% Similarity=0.093 Sum_probs=99.4
Q ss_pred eEec-cCCcEEEEEEEEcCCcEEEEEEeehhh-------------hHhHHHHHHHHHHhhcCCCCce--eeeeeeeeecc
Q 036266 159 HLLG-TESLGSVYKWIFLDETNVAIKVFNLQL-------------ERAFRSFDSKCEVHKNVRHRNL--IKILTTIAILI 222 (312)
Q Consensus 159 ~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~ 222 (312)
..+| .|+.|+||.+... +..++||.+.... ......+.+|++++.+++|+++ ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4677 8899999998764 6779999885321 1123457889999999998885 56666543322
Q ss_pred cc--cEEEEecccCC-CCHHHHH-------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 223 LK--PWYLSSCVMPN-GDFPERL-------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 223 ~~--~~~l~~~~~~~-g~~~~~~-------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.. ..++++|++++ .++.+.+ ..+.++++++.+|| +.+|+||||||+|||++.++.++++|||.++..
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 21 23588899997 5776543 46789999999999 999999999999999998889999999988764
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-16 Score=124.84 Aligned_cols=130 Identities=18% Similarity=0.147 Sum_probs=106.4
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCC--CceeeeeeeeeecccccEEEEecccC
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRH--RNLIKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
..+.+++|.++.||++...+ ..+++|....... ...+.+|+.+++.++| ..+++++.+.... ...++++||++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~e~~~ 76 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLMEWIE 76 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEEEecC
Confidence 35678999999999999744 6799999875433 4568889999999976 4888887776533 45788888998
Q ss_pred CCCH-----HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 235 NGDF-----PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 235 ~g~~-----~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++ .....++.+++++++++|.....+++|+|+||+||++++.+.++++|||.++.
T Consensus 77 g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 77 GETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 8755 46678999999999999954346899999999999999989999999999876
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.1e-17 Score=164.12 Aligned_cols=115 Identities=38% Similarity=0.626 Sum_probs=72.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|++|+|++|.+++.+|..++++++|+.|++++|.+.+.+|..++++++|++|+|++|++++.+|..++.+++|++|+|
T Consensus 140 ~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 219 (968)
T PLN00113 140 PNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYL 219 (968)
T ss_pred CCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEEC
Confidence 45566666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
++|++++.+|..+.++++|++|++++|.+++.+|.
T Consensus 220 ~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 254 (968)
T PLN00113 220 GYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPS 254 (968)
T ss_pred cCCccCCcCChhHhcCCCCCEEECcCceeccccCh
Confidence 66666666666666666666666666666555553
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.1e-19 Score=135.47 Aligned_cols=132 Identities=33% Similarity=0.442 Sum_probs=119.8
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++++++|-||+|+++ .+|+.+..|.+|+.|++++|++. .+|..+++|+.|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 356789999999999 88889999999999999999998 89999999999999999999998 9999999999999999
Q ss_pred ccCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccccccc
Q 036266 81 LSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALC 135 (312)
Q Consensus 81 l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~ 135 (312)
|+.|++.. .+|..|..++.|+.|++++|.+.-.+|+...+.++..+.+..|..+.
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~ 164 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLS 164 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhh
Confidence 99999974 68999999999999999999999777777778888888877776443
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-16 Score=137.51 Aligned_cols=160 Identities=23% Similarity=0.311 Sum_probs=125.0
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEcCC------cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeee
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLDE------TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTI 218 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~------~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 218 (312)
.++.....+++...++-+|+||.||.|.+++. +.|-+|.++... +-....+..|.-.+..+.|||+.++.+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 44555566778788889999999999976532 346777776543 33455678898899999999999999988
Q ss_pred eecccccEEEEecccCCCCHHHHH--------------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 219 AILILKPWYLSSCVMPNGDFPERL--------------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 219 ~~~~~~~~~l~~~~~~~g~~~~~~--------------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
.......+ ..+.++.-|++...+ .++.|++.|++||| ..+|||.||-.+|.+||+.
T Consensus 357 ie~~~~P~-V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 357 IEDYATPF-VLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred eeccCcce-EEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhh
Confidence 65444333 333466556554433 48999999999999 9999999999999999999
Q ss_pred CceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 279 MVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 279 ~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
..+|++|=.++|.+ |+.+||+.| |+.|+.|+
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeI 502 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEI 502 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcccc
Confidence 99999999999885 999999876 78888764
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.4e-16 Score=146.59 Aligned_cols=106 Identities=34% Similarity=0.526 Sum_probs=52.7
Q ss_pred CcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccC
Q 036266 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 83 (312)
++.|+|++|.|+|.+|..++.|++|+.|+|++|++.|.+|..++.+++|+.|+|++|+++|.+|+.++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CccCCCcchhHhhc-CCCcEEEeeCce
Q 036266 84 NNLSGKIPKSLEAL-SNLKELNVSYNR 109 (312)
Q Consensus 84 N~l~~~~p~~~~~l-~~L~~L~l~~N~ 109 (312)
|+++|.+|..+..+ .++..+++++|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCc
Confidence 55555555444432 233344444443
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.1e-14 Score=124.96 Aligned_cols=130 Identities=32% Similarity=0.464 Sum_probs=108.8
Q ss_pred cccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhH---hHHHHHHHHHHhhcCCCC-ceeeeeeeeeecccccEEEEe
Q 036266 155 FNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLER---AFRSFDSKCEVHKNVRHR-NLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~l~~ 230 (312)
|.....+|.|+|+.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+.+. .....++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~ 77 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ--DEGSLYLVM 77 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe--cCCEEEEEE
Confidence 566788999999999999876 67999999865422 467789999999999988 7999999884 333367888
Q ss_pred cccCCCCHH---------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhh
Q 036266 231 CVMPNGDFP---------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~---------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~ 291 (312)
+++.++++. ....++.|++.++.|+| ..+++|||+||+||+++..+ .++++|||.++.
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~ 151 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKL 151 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCccee
Confidence 899888655 23358999999999999 88899999999999999888 799999998863
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.2e-16 Score=123.30 Aligned_cols=108 Identities=30% Similarity=0.415 Sum_probs=81.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCC-CCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG-SIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L 79 (312)
|.+|+.|++++|++. .+|.++..|++|+.|+++.|++. .+|..|+.++.|+.|||++|++.. .+|+.|-.++.|+.|
T Consensus 55 l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlral 132 (264)
T KOG0617|consen 55 LKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRAL 132 (264)
T ss_pred hhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHH
Confidence 467888999999988 88889999999999999999988 889999999999999998888764 356666555566666
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
.|++|.+. .+|..++++++|+.|.+.+|.+-
T Consensus 133 yl~dndfe-~lp~dvg~lt~lqil~lrdndll 163 (264)
T KOG0617|consen 133 YLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL 163 (264)
T ss_pred HhcCCCcc-cCChhhhhhcceeEEeeccCchh
Confidence 66666655 55555566666666666555554
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-14 Score=131.78 Aligned_cols=135 Identities=17% Similarity=0.173 Sum_probs=92.7
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhH---------------------------------------
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAF--------------------------------------- 193 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--------------------------------------- 193 (312)
..|+ .+.+|+|++|+||+|+.++|+.||||+.+.......
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3344 367999999999999999999999999865321100
Q ss_pred -HHHHHHHHHhhcC----CCCceeeeeeeeeecccccEEEEecccCCCCHHHH----------HHHHHHHHH-HHHHHhC
Q 036266 194 -RSFDSKCEVHKNV----RHRNLIKILTTIAILILKPWYLSSCVMPNGDFPER----------LNIMIDMAL-AFEYLHH 257 (312)
Q Consensus 194 -~~~~~e~~~l~~l----~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~----------~~i~~~i~~-~l~ylH~ 257 (312)
-++.+|.+.+.++ +|.+-+.+-..+.. ....-+++|||++++++.+. .+++.+++. .+..+|
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~- 274 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWD-RTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVL- 274 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehh-hcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHH-
Confidence 0134455544444 22222222222211 12235889999999865433 246666666 467788
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 258 ~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..+++|+|+||.||++++++.++++|||++..+
T Consensus 275 --~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 275 --RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred --hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 889999999999999999999999999998775
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.2e-14 Score=140.85 Aligned_cols=150 Identities=23% Similarity=0.165 Sum_probs=108.0
Q ss_pred hhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC---CCceeeeeeeeeeccccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR---HRNLIKILTTIAILILKP 225 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~ 225 (312)
......|.+.+.+|+|+||.||+|...+|+.||+|+-+... .-+|.-=.+++.+|+ -+.|..+.......+ .
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--~ 768 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQN--A 768 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCC--c
Confidence 34456788899999999999999998889999999876532 111221223344444 123333333333223 3
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-------CCCceEEccc
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-------EDMVAHVSDF 286 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-------~~~~~kl~DF 286 (312)
-+++++|.+.|++.+.+ -++.|++.-+++|| ..+|||+||||+|+||. +...++|+||
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 46777799999877654 48899999999999 99999999999999993 2346899999
Q ss_pred cchhhh----------------hhhhhhhhcCCCCC
Q 036266 287 NISKLL----------------GVLLPETFTRKKPT 306 (312)
Q Consensus 287 G~a~~~----------------g~~~~e~~tg~~p~ 306 (312)
|.|-.+ +.-.+||.+|+.-+
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWt 881 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWT 881 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCc
Confidence 988665 55668888887643
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.8e-14 Score=137.90 Aligned_cols=112 Identities=40% Similarity=0.602 Sum_probs=101.4
Q ss_pred CCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEee
Q 036266 27 VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS 106 (312)
Q Consensus 27 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 106 (312)
.++.|+|++|.+.|.+|..+..+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+.++++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCCcc--CCCcccccccccccccccC
Q 036266 107 YNRLEGEIPTNVP--FGNFSSQSFISNYALCAHQ 138 (312)
Q Consensus 107 ~N~~~~~~p~~~~--~~~l~~l~~~~n~~l~~~~ 138 (312)
+|+++|.+|.... ...+..+.+.+|..+|+.+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 9999999997532 2344567788888888754
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5e-16 Score=134.29 Aligned_cols=126 Identities=25% Similarity=0.317 Sum_probs=113.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCcccc-CCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFE-SLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~ 80 (312)
+.|+.||..+|-+. .+|++++.|.+|..|+|..|++. .+| +|+++..|.+|+++.|++. .+|...+ ++++|..||
T Consensus 183 ~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeee
Confidence 46788999999887 89999999999999999999998 788 7999999999999999998 8888876 999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYA 133 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~ 133 (312)
|.+|+++ +.|+.++-+++|.+||+|+|.+++.++.-+.+ .+..+.+.||+.
T Consensus 259 LRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred ccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCch
Confidence 9999999 89999999999999999999999777766555 778888888874
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-14 Score=142.69 Aligned_cols=51 Identities=20% Similarity=0.287 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-------------------CCCceEEccccchh
Q 036266 237 DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-------------------EDMVAHVSDFNISK 290 (312)
Q Consensus 237 ~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-------------------~~~~~kl~DFG~a~ 290 (312)
+..+.+.++.||++||+||| +++|+||||||+|||++ .++.+|++|||+++
T Consensus 78 ~~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~ 147 (793)
T PLN00181 78 DAFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSR 147 (793)
T ss_pred cHHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccc
Confidence 44556679999999999999 89999999999999994 45678888999875
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.3e-15 Score=135.72 Aligned_cols=114 Identities=31% Similarity=0.309 Sum_probs=68.2
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
|+.|+.|+||.|.|...-++++.-.++|+.|+||+|++....|.+|..|.+|++|+|+.|+++..--..|..+.+|++||
T Consensus 292 Lt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~Ld 371 (873)
T KOG4194|consen 292 LTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLD 371 (873)
T ss_pred cchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhc
Confidence 45566666666666655566666666666666666666666666666666666666666666544444555566666666
Q ss_pred ccCCccCCCcch---hHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPK---SLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~---~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|.|++.+.+ .|..|++|+.|++.+|++. .||
T Consensus 372 Lr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~ 408 (873)
T KOG4194|consen 372 LRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIP 408 (873)
T ss_pred CcCCeEEEEEecchhhhccchhhhheeecCceee-ecc
Confidence 666666554442 3455555666666666654 444
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=109.88 Aligned_cols=124 Identities=18% Similarity=0.165 Sum_probs=92.9
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCcee-eeeeeeeecccccEEEEecccCCC
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI-KILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
.+.++.|.++.||++... ++.|++|....... ....+..|+++++.+.+.+++ +++.+.. ...+++||++++.
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~----~~~~lv~e~i~G~ 76 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP----ETGVLITEFIEGS 76 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC----CCCeEEEEecCCC
Confidence 356788999999998864 67899999865422 123457888888888665544 3443322 1236888999998
Q ss_pred CHHH----HHHHHHHHHHHHHHHhCCCCCC-----ceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 237 DFPE----RLNIMIDMALAFEYLHHGRSTP-----MVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 237 ~~~~----~~~i~~~i~~~l~ylH~~~~~~-----iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++.. ...++.+++++++.|| ..+ ++|+|++|.||+++ ++.++++|||.|..
T Consensus 77 ~l~~~~~~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTEDFSDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccccccccCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 7653 3357789999999999 555 59999999999999 66899999999876
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.9e-14 Score=134.93 Aligned_cols=143 Identities=25% Similarity=0.283 Sum_probs=104.3
Q ss_pred ccceEeccCCcEEEEEEEEc-CCcEEEEEEee----h-hhhH-hHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 156 NEWHLLGTESLGSVYKWIFL-DETNVAIKVFN----L-QLER-AFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~----~-~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.....+|.|++|.|+.+... ..+..+.|... . .... ....+..|..+-..++|||++.....+..... ..-
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~--~~~ 398 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDG--ILQ 398 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhccc--chh
Confidence 34678899999977766643 23334444332 1 1111 12226678888899999999887766543222 222
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
.||||+. |+...+ .++.|+..|++|+| ..+|.|||+|++|++++.+|.+||+|||.+..+
T Consensus 399 ~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 399 SMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 3889998 665443 58999999999999 999999999999999999999999999998775
Q ss_pred --------------hhhhhhhhcCCC
Q 036266 293 --------------GVLLPETFTRKK 304 (312)
Q Consensus 293 --------------g~~~~e~~tg~~ 304 (312)
+|++||.+++..
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ 500 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKE 500 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccc
Confidence 678888888754
|
|
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-14 Score=130.97 Aligned_cols=111 Identities=31% Similarity=0.273 Sum_probs=68.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
|++|+.|.|..|+++..-.+.|..|.+++.|+|+.|++...-..++.+|+.|+.|+||+|.+....++++..+++|++||
T Consensus 244 L~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~Ld 323 (873)
T KOG4194|consen 244 LPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELD 323 (873)
T ss_pred chhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEe
Confidence 45566666666666655555666666666666666666655556666666666666666666666666666666666666
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
|++|+|+...|.+|..|..|++|+|++|.++
T Consensus 324 Ls~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 324 LSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred ccccccccCChhHHHHHHHhhhhcccccchH
Confidence 6666666555555555555555555555443
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.1e-14 Score=130.79 Aligned_cols=128 Identities=36% Similarity=0.440 Sum_probs=101.3
Q ss_pred CCCcEEeecCCcccccCc-cccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCC-----------------
Q 036266 2 EYILQINLFSNSLSGSLP-SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ----------------- 63 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~----------------- 63 (312)
+++..|+||+|+|. .|| +-|.+|+.|-.||||+|++. .+|+.+.+|..|++|+||+|.+.
T Consensus 126 Kn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLh 203 (1255)
T KOG0444|consen 126 KNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLH 203 (1255)
T ss_pred cCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhh
Confidence 35678899999988 555 45678888888999999988 67777888888888888888654
Q ss_pred --------CCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 64 --------GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 64 --------~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
..+|.++..+.+|..+|+|.|++. .+|+.+.++++|+.|+||+|+|+..--......++..+.++.|.
T Consensus 204 ms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQ 279 (1255)
T KOG0444|consen 204 MSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQ 279 (1255)
T ss_pred cccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccch
Confidence 257888999999999999999999 89999999999999999999998543333344455566665554
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-12 Score=121.76 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=87.5
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhH----------------------------------hHHH
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLER----------------------------------AFRS 195 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~~ 195 (312)
....|+. +.+|+|++|+||+|+.++ |+.||||+.+..... ..+.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3455666 789999999999999877 999999999754211 0111
Q ss_pred ------HHHHHHHhhcCC----CCceeeeeeeeeecccccEEEEecccCCCCHHHHH----------HHHHHHHHH-HHH
Q 036266 196 ------FDSKCEVHKNVR----HRNLIKILTTIAILILKPWYLSSCVMPNGDFPERL----------NIMIDMALA-FEY 254 (312)
Q Consensus 196 ------~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~----------~i~~~i~~~-l~y 254 (312)
+.+|+..+.+++ +.+.+.+-..+.. ....-+++|||++++++.+.- .++...++. +.-
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d-~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q 275 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWD-YCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ 275 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecc-cCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 233333333332 3222222222211 123457999999999875421 233332222 122
Q ss_pred HhCCCCCCceecCCCCCCeeeCCCC----ceEEccccchhhh
Q 036266 255 LHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFNISKLL 292 (312)
Q Consensus 255 lH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG~a~~~ 292 (312)
++ ..+++|+|+||.||+++.++ .+++.|||++..+
T Consensus 276 if---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 276 VF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 34 67899999999999999887 9999999988765
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.9e-14 Score=129.02 Aligned_cols=134 Identities=25% Similarity=0.362 Sum_probs=91.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc----------------------CCCcCccCCCCCCEEeCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG----------------------DIPITISGLKDLTTLFLAG 59 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~----------------------~~p~~~~~l~~L~~L~l~~ 59 (312)
.+|..+|||.|+|. .+|..+.++.+|+.|+||+|+|+. .+|+++.+|+.|+.|++.+
T Consensus 222 ~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhcc
Confidence 45666666666666 666666666666666666666551 4666666666666666666
Q ss_pred CcCCC-CCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccccc
Q 036266 60 NRSQG-SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCAH 137 (312)
Q Consensus 60 n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 137 (312)
|+++- -+|..++.|.+|+.+..++|++. .+|.+++.+.+|+.|.|++|++- .+|.. .-+..+..+++..|+.+-.+
T Consensus 301 NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMP 378 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMP 378 (1255)
T ss_pred CcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCC
Confidence 66553 36777777777777777777777 67888888888888888888886 44543 34567777888888766554
Q ss_pred C
Q 036266 138 Q 138 (312)
Q Consensus 138 ~ 138 (312)
+
T Consensus 379 P 379 (1255)
T KOG0444|consen 379 P 379 (1255)
T ss_pred C
Confidence 4
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.2e-12 Score=106.62 Aligned_cols=152 Identities=22% Similarity=0.264 Sum_probs=94.9
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCC----------Cceeeeeeeee
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRH----------RNLIKILTTIA 219 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~ 219 (312)
.+...+.||.|+++.||.+.+. +++.+|||+..... ....+++.+|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4566789999999999999986 57889999986433 3345556666544444322 11111122211
Q ss_pred ec---------c-cc-----cEEEEecccCCCCH-------------------HHHHHHHHHHHHHHHHHhCCCCCCcee
Q 036266 220 IL---------I-LK-----PWYLSSCVMPNGDF-------------------PERLNIMIDMALAFEYLHHGRSTPMVH 265 (312)
Q Consensus 220 ~~---------~-~~-----~~~l~~~~~~~g~~-------------------~~~~~i~~~i~~~l~ylH~~~~~~iiH 265 (312)
.. . .. ..++.|+-+. +|+ ..++.+..|+++.++++| ..++||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 10 0 01 1233333322 222 223457799999999999 899999
Q ss_pred cCCCCCCeeeCCCCceEEccccchhhh-----------------------------------------hhhhhhhhcCCC
Q 036266 266 CDLKPSNNLLDEDMVAHVSDFNISKLL-----------------------------------------GVLLPETFTRKK 304 (312)
Q Consensus 266 rDlkp~Nill~~~~~~kl~DFG~a~~~-----------------------------------------g~~~~e~~tg~~ 304 (312)
+||||+|++++.+|.++|+||+..... |++++.++++..
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l 248 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL 248 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence 999999999999999999999854432 888888888888
Q ss_pred CCccc
Q 036266 305 PTIEM 309 (312)
Q Consensus 305 p~~e~ 309 (312)
|+...
T Consensus 249 Pf~~~ 253 (288)
T PF14531_consen 249 PFGLS 253 (288)
T ss_dssp STCCC
T ss_pred CCCCC
Confidence 87643
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.5e-14 Score=120.99 Aligned_cols=123 Identities=31% Similarity=0.361 Sum_probs=79.3
Q ss_pred EeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCcc
Q 036266 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNL 86 (312)
Q Consensus 7 l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 86 (312)
+.+++|.++ -+|..+..+++|+.|+|++|-+. .+|..++.+..|++|++|.|+|. .+|+.+-.+..|+++-.++|++
T Consensus 417 l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi 493 (565)
T KOG0472|consen 417 LVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQI 493 (565)
T ss_pred HHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccc
Confidence 445555544 66666777777777777777666 66777777777777777777776 6666666666666666666666
Q ss_pred CCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 87 SGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 87 ~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
....|+.+.+|.+|+.|||.+|.+...+|..+.+.++..+.+.+|+
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNp 539 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNP 539 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCc
Confidence 6444455666666666666666666445555556666666666665
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.1e-13 Score=124.42 Aligned_cols=127 Identities=25% Similarity=0.212 Sum_probs=99.4
Q ss_pred eccCCcEEEEEEEE----cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEeccc
Q 036266 161 LGTESLGSVYKWIF----LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 161 lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+|+|+||.|+.++- ..+..+|+|+.++.. .........|..++...+ ||.+|++...+.... ..+++.++.
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~--kl~l~ld~~ 79 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG--KLYLILDFL 79 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc--chhHhhhhc
Confidence 58899999987652 235668999887643 111123455777888887 999999988887544 455666699
Q ss_pred CCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 234 PNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 234 ~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+|++.++. .+...++-|++++| +.+|+|||+|++||+++.+|.+|+.|||+++..
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~ 147 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEA 147 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHh
Confidence 988766554 37788899999999 999999999999999999999999999999885
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.2e-13 Score=130.60 Aligned_cols=129 Identities=30% Similarity=0.388 Sum_probs=110.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
+.|+.|+|.+|.|+...-+.+.+.++|+.|+|++|++.......+.+++.|+.|+||+|+++ .+|..+..+..|++|..
T Consensus 359 ~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~a 437 (1081)
T KOG0618|consen 359 AALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRA 437 (1081)
T ss_pred HHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhh
Confidence 45788999999999887778899999999999999998666667889999999999999998 88999999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeecc-CCCCccCCCccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGE-IPTNVPFGNFSSQSFISNYA 133 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~-~p~~~~~~~l~~l~~~~n~~ 133 (312)
.+|++. .+| .+..+++|+.+|+|.|+++.. +|...+.+++..+++.||..
T Consensus 438 hsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 438 HSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 999998 788 889999999999999998753 45545557888888888864
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.3e-13 Score=108.95 Aligned_cols=151 Identities=22% Similarity=0.360 Sum_probs=116.4
Q ss_pred cccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 155 FNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
......+.+.-.|..|+|++. |..+++|++..+. ....+.|..|...++-+.||||..+++.|..+ ..++++..|
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp--pnlv~isq~ 268 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP--PNLVIISQY 268 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC--CCceEeeee
Confidence 344556778888999999984 4556777776543 44557799999999999999999999999854 567888889
Q ss_pred cCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc--c--ccch---hh
Q 036266 233 MPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS--D--FNIS---KL 291 (312)
Q Consensus 233 ~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~--D--FG~a---~~ 291 (312)
|+.|++. +..+++.++|+|++|||+. ++-|.---+.+..+++|++.+++|+ | |.+- +.
T Consensus 269 mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~ 347 (448)
T KOG0195|consen 269 MPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRA 347 (448)
T ss_pred ccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccc
Confidence 9999664 4457999999999999965 4445556789999999999988874 3 3221 11
Q ss_pred h---------------------------hhhhhhhhcCCCCCccc
Q 036266 292 L---------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 292 ~---------------------------g~~~~e~~tg~~p~~e~ 309 (312)
+ .++++|+.|+..||.++
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadl 392 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADL 392 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccC
Confidence 1 78899999999998764
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.4e-11 Score=96.26 Aligned_cols=124 Identities=19% Similarity=0.126 Sum_probs=88.3
Q ss_pred eEeccCCcEEEEEEEEcC-------CcEEEEEEeehhh------------h----------HhHHH----HHHHHHHhhc
Q 036266 159 HLLGTESLGSVYKWIFLD-------ETNVAIKVFNLQL------------E----------RAFRS----FDSKCEVHKN 205 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~----~~~e~~~l~~ 205 (312)
..||.|.=+.||.|...+ +..+|||+.+... + ...+. ..+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468899999999998543 4689999885421 0 00112 2378888888
Q ss_pred CCC--CceeeeeeeeeecccccEEEEecccCCCCH------------HHHHHHHHHHHHHHHHH-hCCCCCCceecCCCC
Q 036266 206 VRH--RNLIKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYL-HHGRSTPMVHCDLKP 270 (312)
Q Consensus 206 l~h--~niv~~~~~~~~~~~~~~~l~~~~~~~g~~------------~~~~~i~~~i~~~l~yl-H~~~~~~iiHrDlkp 270 (312)
+.. -++.+++++ ..-+++|||+.++.+ .+..++..+++.++..+ | ..++||+|+++
T Consensus 83 l~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 853 355555543 224677889876411 22346788999999999 7 88999999999
Q ss_pred CCeeeCCCCceEEccccchhhh
Q 036266 271 SNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.||++++ +.+.++|||.|-..
T Consensus 154 ~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 154 YNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred HHEEEEC-CcEEEEECCCceeC
Confidence 9999974 67999999987544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.4e-12 Score=101.68 Aligned_cols=103 Identities=33% Similarity=0.426 Sum_probs=26.4
Q ss_pred CcEEeecCCcccccCccccc-cCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccc-cCCCCCCEEec
Q 036266 4 ILQINLFSNSLSGSLPSNIQ-NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF-ESLASLEFLDL 81 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~l 81 (312)
+++|+|++|.|+ .+. .++ .|.+|+.|||++|.++. ++ .+..++.|++|++++|+++ .+++.+ ..+++|+.|+|
T Consensus 21 ~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 21 LRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYL 95 (175)
T ss_dssp -----------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-
T ss_pred cccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEEC
Confidence 455566666555 332 233 35555556666665552 32 3555555666666666655 333333 24555666666
Q ss_pred cCCccCCC-cchhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGK-IPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~-~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
++|+|... --..+..+++|+.|++.+|.++
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 66655421 1134445555555555555554
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-12 Score=124.69 Aligned_cols=131 Identities=21% Similarity=0.172 Sum_probs=96.4
Q ss_pred ccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh-hHhHHHHH---HHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL-ERAFRSFD---SKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++...+.+|++.|=.|.+|+++.|. |+||++-++. .-..+.+. .|++ ....+|||++++.-+.. .....||+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~--t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLV--TDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHH--hhHHHHHH
Confidence 5667789999999999999987775 8999987654 22333333 3444 55568999999866533 33444555
Q ss_pred ecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
-.|.... ...+..-|+.|++.|+.-+| ..+|+|+|||.+|||++....+.|+||..-+.
T Consensus 100 RqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCC
Confidence 4454432 12233359999999999999 99999999999999999988999999975444
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=99.23 E-value=6.7e-12 Score=82.63 Aligned_cols=61 Identities=33% Similarity=0.330 Sum_probs=40.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l 62 (312)
|+|+.|++++|+|+...+..|.++++|++|++++|++....|..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4666777777777755445666677777777777777666666666667777776666653
|
... |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.9e-11 Score=104.36 Aligned_cols=48 Identities=31% Similarity=0.368 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCC--ceEEccccchh
Q 036266 240 ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDM--VAHVSDFNISK 290 (312)
Q Consensus 240 ~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~--~~kl~DFG~a~ 290 (312)
...-+..|+++|+.||| +++|.|||+|++|||+. +|+ ...|+|||++-
T Consensus 342 ~~~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred HHHHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 34458899999999999 99999999999999993 444 46899999753
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.4e-11 Score=81.03 Aligned_cols=60 Identities=43% Similarity=0.536 Sum_probs=35.7
Q ss_pred CCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCcc
Q 036266 27 VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNL 86 (312)
Q Consensus 27 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 86 (312)
+|+.|++++|++....+..|.++++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455666666666655555566666666666666666655555566666666666666553
|
... |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.3e-12 Score=116.28 Aligned_cols=105 Identities=34% Similarity=0.439 Sum_probs=58.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCC-----
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASL----- 76 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L----- 76 (312)
..|+.|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|+.++.+..|..|+.+.|.+. .+|..++.+.+|
T Consensus 121 ~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~v 196 (722)
T KOG0532|consen 121 EALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNV 196 (722)
T ss_pred hHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHH
Confidence 34556666666666 5555555554 566666666665 55555665555666666666555 445555544444
Q ss_pred -----------------CEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 77 -----------------EFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 77 -----------------~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
..||+|.|+++ .+|..|..|+.|++|-|.+|.++
T Consensus 197 rRn~l~~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 197 RRNHLEDLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred hhhhhhhCCHHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC
Confidence 45555555555 45555555555555555555554
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.1e-11 Score=95.55 Aligned_cols=101 Identities=28% Similarity=0.363 Sum_probs=52.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCc-cCCCCCCEEeCCCCcCCCCC-CccccCCCCCCE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSI-PKSFESLASLEF 78 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~ 78 (312)
|++|+.|+|++|.|+ .++ .+..|+.|++|++++|+++. +++.+ ..+++|+.|+|++|++...- -..+..+++|+.
T Consensus 41 l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~ 117 (175)
T PF14580_consen 41 LDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRV 117 (175)
T ss_dssp -TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--E
T ss_pred hcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcce
Confidence 468999999999999 555 58899999999999999995 54444 46899999999999998421 245778999999
Q ss_pred EeccCCccCCCcc----hhHhhcCCCcEEEe
Q 036266 79 LDLSSNNLSGKIP----KSLEALSNLKELNV 105 (312)
Q Consensus 79 L~l~~N~l~~~~p----~~~~~l~~L~~L~l 105 (312)
|+|.+|.++. .+ -.+..+++|+.||-
T Consensus 118 L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 118 LSLEGNPVCE-KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EE-TT-GGGG-STTHHHHHHHH-TT-SEETT
T ss_pred eeccCCcccc-hhhHHHHHHHHcChhheeCC
Confidence 9999999983 34 35778999998873
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.2e-11 Score=114.35 Aligned_cols=39 Identities=31% Similarity=0.354 Sum_probs=19.7
Q ss_pred CCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 76 LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|+.|++++|+|+ .+|..+.++++|+.|++++|++++.+|
T Consensus 424 L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 424 LLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred hhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 344444444444 445555555555555555555554433
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-10 Score=95.74 Aligned_cols=133 Identities=15% Similarity=0.098 Sum_probs=99.1
Q ss_pred eEeccCCcEEEEEEEEcCCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCC--ceeeeeeeeeecc-cccEEEEecccC
Q 036266 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHR--NLIKILTTIAILI-LKPWYLSSCVMP 234 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~-~~~~~l~~~~~~ 234 (312)
+.++.|..+.+|++...+|+.+++|....... .....+.+|+++++.+++. .+.+++.+..... ....+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56889999999999876667899999865432 1345678899999998763 3556666554321 124578888998
Q ss_pred CCCH-----------HHHHHHHHHHHHHHHHHhCCC--------------------------------------------
Q 036266 235 NGDF-----------PERLNIMIDMALAFEYLHHGR-------------------------------------------- 259 (312)
Q Consensus 235 ~g~~-----------~~~~~i~~~i~~~l~ylH~~~-------------------------------------------- 259 (312)
+.++ .++..++.++++++.+||+..
T Consensus 84 G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (223)
T cd05154 84 GRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRW 163 (223)
T ss_pred CEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 7643 345578999999999999421
Q ss_pred ---------CCCceecCCCCCCeeeCC--CCceEEccccchhh
Q 036266 260 ---------STPMVHCDLKPSNNLLDE--DMVAHVSDFNISKL 291 (312)
Q Consensus 260 ---------~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~ 291 (312)
...++|+|+.|.||+++. ++.+.++||+.+..
T Consensus 164 ~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 164 LEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245799999999999998 66789999998766
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-11 Score=107.56 Aligned_cols=89 Identities=27% Similarity=0.291 Sum_probs=54.0
Q ss_pred CCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccc
Q 036266 48 GLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQ 126 (312)
Q Consensus 48 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l 126 (312)
+|++|+.|+|++|++++.-+.+|.++..++.|.|..|+|...--..|.++..|+.|+|.+|+|+..-|.. .....+..+
T Consensus 272 ~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l 351 (498)
T KOG4237|consen 272 KLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTL 351 (498)
T ss_pred hcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeee
Confidence 3444555555555555555555555555555555555555433445666777788888888887655543 334456667
Q ss_pred cccccccccc
Q 036266 127 SFISNYALCA 136 (312)
Q Consensus 127 ~~~~n~~l~~ 136 (312)
.+.+|+..|.
T Consensus 352 ~l~~Np~~Cn 361 (498)
T KOG4237|consen 352 NLLSNPFNCN 361 (498)
T ss_pred ehccCcccCc
Confidence 7777776664
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.5e-10 Score=86.88 Aligned_cols=126 Identities=14% Similarity=0.116 Sum_probs=89.1
Q ss_pred EeccCCcEEEEEEEEcCCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.+++|+=+.+|.+.+. |..+++|.=..+. .-....-.+|++++++++--.|...+-+.. +.....++||
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~~~~~I~me 79 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DPDNGLIVME 79 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cCCCCEEEEE
Confidence 5678888999988763 3345666432211 112344678999998886544444333333 3334456777
Q ss_pred ccCCCCHHHHH-----HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 232 VMPNGDFPERL-----NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 232 ~~~~g~~~~~~-----~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
|+++-.+.+.+ .++..+-.-+.-|| ..+|||+|+.++||++..+. +.++|||++..-
T Consensus 80 ~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEARPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhcchHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99988766443 58888889999999 99999999999999998754 999999998863
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.09 E-value=7.8e-11 Score=113.44 Aligned_cols=108 Identities=31% Similarity=0.427 Sum_probs=76.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+|+.++.+..|++|.||.++++. .+.+|+| ++++.- +.+- ++.....|.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-----ilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-----ILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-----hhhc--cccccCCccee-----------------
Confidence 44678999999999999999999864 5668884 433211 1110 33333444444
Q ss_pred ecccCCCCHHHHHH----HHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 230 SCVMPNGDFPERLN----IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~~----i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
||-.+.++ .-.+++.+++|+| ..+|+|||+||+|.+|+.-|.+|+.|||+++..
T Consensus 136 ------gDc~tllk~~g~lPvdmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 136 ------GDCATLLKNIGPLPVDMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred ------chhhhhcccCCCCcchhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhh
Confidence 22222211 1123388999999 999999999999999999999999999998874
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.2e-11 Score=117.32 Aligned_cols=105 Identities=36% Similarity=0.465 Sum_probs=91.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
.++|+.|+|++|+|.......+.+|..|+.|+||+|++. .+|.++..++.|++|...+|++. ..| .+..+++|+.+|
T Consensus 382 ~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lD 458 (1081)
T KOG0618|consen 382 FKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLD 458 (1081)
T ss_pred ccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEe
Confidence 368999999999999444457899999999999999999 79999999999999999999998 888 899999999999
Q ss_pred ccCCccCC-CcchhHhhcCCCcEEEeeCce
Q 036266 81 LSSNNLSG-KIPKSLEALSNLKELNVSYNR 109 (312)
Q Consensus 81 l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~ 109 (312)
+|.|+|+. .+|..... ++|++||+++|.
T Consensus 459 lS~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 459 LSCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred cccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 99999984 34544333 799999999996
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.8e-10 Score=114.89 Aligned_cols=123 Identities=24% Similarity=0.287 Sum_probs=98.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|...+.+|..+++|++|+.|++++|...+.+|..+ .+++|++|++++|.....+|.. ..+|+.|+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 578999999998888999999999999999999986666788776 7999999999998766566653 468999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeC-ceeeccCCCCccCCCccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSY-NRLEGEIPTNVPFGNFSSQSFI 129 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~-N~~~~~~p~~~~~~~l~~l~~~ 129 (312)
++|.++ .+|.++..+++|+.|++++ |+++...+....+..+..+.+.
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~ 901 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFS 901 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecC
Confidence 999998 7899999999999999987 5666433333344444444443
|
syringae 6; Provisional |
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.08 E-value=5.8e-10 Score=114.30 Aligned_cols=130 Identities=27% Similarity=0.263 Sum_probs=81.4
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCC----------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS---------------- 65 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~---------------- 65 (312)
++|+.|+|++|.....+|..+.+|++|+.|++++|...+.+|..+ ++++|+.|++++|...+.
T Consensus 657 ~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n 735 (1153)
T PLN03210 657 TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDET 735 (1153)
T ss_pred CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCC
Confidence 566677776665445667777777777777777654444566544 455555555555432222
Q ss_pred ----CCccc------------------------------cCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 66 ----IPKSF------------------------------ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 66 ----~p~~~------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+|..+ ...++|+.|+|++|...+.+|.++.++++|+.|++++|...
T Consensus 736 ~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L 815 (1153)
T PLN03210 736 AIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL 815 (1153)
T ss_pred ccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCc
Confidence 22211 01236677777777766678888999999999999887655
Q ss_pred ccCCCCccCCCcccccccccc
Q 036266 112 GEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 112 ~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+.+|....+.++..+.+.++.
T Consensus 816 ~~LP~~~~L~sL~~L~Ls~c~ 836 (1153)
T PLN03210 816 ETLPTGINLESLESLDLSGCS 836 (1153)
T ss_pred CeeCCCCCccccCEEECCCCC
Confidence 567766556666666665543
|
syringae 6; Provisional |
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.2e-12 Score=107.92 Aligned_cols=132 Identities=27% Similarity=0.327 Sum_probs=110.1
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCC-CcCCCCCCccccCCCCCCEEec
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG-NRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.-+.|+|..|.|+...|.+|..+++|+.||||+|+|+-+-|++|.++++|.+|-+-+ |+|+...-+.|++|.+|+-|.+
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLll 147 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLL 147 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhc
Confidence 457899999999977788999999999999999999999999999999998886655 9999555577999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC--ccCCCccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN--VPFGNFSSQSFISNYALC 135 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~--~~~~~l~~l~~~~n~~l~ 135 (312)
.-|++.-...+.|..|++|..|.+-+|.+. .++.. ..+.....+.+..|+..|
T Consensus 148 Nan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~ic 202 (498)
T KOG4237|consen 148 NANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFIC 202 (498)
T ss_pred ChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCcccc
Confidence 999999778899999999999999999987 55542 333444445555565444
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.5e-10 Score=110.54 Aligned_cols=97 Identities=32% Similarity=0.442 Sum_probs=52.0
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.|+|++|+|+ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|++. .+|..+. .+|+.|+++
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 4556666666666 4444433 35666666666655 3444332 34555666666555 4454443 355666666
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+|+|+ .+|..+. .+|+.|++++|+++
T Consensus 271 ~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 271 HNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred CCccC-ccccccC--CCCcEEECCCCccc
Confidence 66665 3454443 35566666666555
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.7e-10 Score=110.04 Aligned_cols=33 Identities=48% Similarity=0.506 Sum_probs=17.3
Q ss_pred CCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 75 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+|+.|+|++|+|+ .+|.. .++|+.|++++|+++
T Consensus 383 ~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls 415 (788)
T PRK15387 383 GLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT 415 (788)
T ss_pred ccceEEecCCccc-CCCCc---ccCCCEEEccCCcCC
Confidence 4556666666665 24432 234555555555555
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-11 Score=110.77 Aligned_cols=99 Identities=26% Similarity=0.400 Sum_probs=65.5
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCC
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 84 (312)
..||.+.|.+. .+|+.+++|.+|+.|.+..|.+. .+|+.+..| .|..||+|.|+++ .+|-.|.+|..|++|-|.+|
T Consensus 169 ~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenN 244 (722)
T KOG0532|consen 169 AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENN 244 (722)
T ss_pred HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccC
Confidence 33444444443 33444444444444444444444 344445433 4789999999999 89999999999999999999
Q ss_pred ccCCCcchhHhhcCCC---cEEEeeCc
Q 036266 85 NLSGKIPKSLEALSNL---KELNVSYN 108 (312)
Q Consensus 85 ~l~~~~p~~~~~l~~L---~~L~l~~N 108 (312)
-|. ..|..++...++ ++|+..-+
T Consensus 245 PLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 245 PLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred CCC-CChHHHHhccceeeeeeecchhc
Confidence 999 788888876554 45555444
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.1e-10 Score=111.03 Aligned_cols=55 Identities=25% Similarity=0.388 Sum_probs=25.9
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCC
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 63 (312)
+|+.|+|++|++. .+|..+. ++|+.|++++|++. .+|..+. ++|+.|++++|+++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt 296 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR 296 (754)
T ss_pred cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc
Confidence 3455555555555 4444433 24555555555554 2343332 24444454444444
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.3e-09 Score=83.61 Aligned_cols=130 Identities=16% Similarity=0.119 Sum_probs=91.0
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEeehh--------hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQ--------LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
....+.+|+-+.|+++.+ .|+...||.-... ..-..++..+|++.+.+++--.|.-..-++.+.....+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~- 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY- 88 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE-
Confidence 456888999999999987 4666666643211 122345677899999988755554444445544444445
Q ss_pred EecccCCC-CH-------------HHH-HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC---ceEEccccchh
Q 036266 229 SSCVMPNG-DF-------------PER-LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM---VAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g-~~-------------~~~-~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~---~~kl~DFG~a~ 290 (312)
|||+++. +. ... ..++..|-+.+.-|| ...|||+||..+||++..++ .+.++|||++.
T Consensus 89 -ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 89 -MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred -EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchh
Confidence 4588773 11 112 368899999999999 99999999999999996544 45899999986
Q ss_pred hh
Q 036266 291 LL 292 (312)
Q Consensus 291 ~~ 292 (312)
.-
T Consensus 165 ~s 166 (229)
T KOG3087|consen 165 VS 166 (229)
T ss_pred cc
Confidence 63
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.01 E-value=3.3e-09 Score=85.92 Aligned_cols=115 Identities=18% Similarity=0.117 Sum_probs=76.1
Q ss_pred EEEEEEEcCCcEEEEEEeehhh--------------------------hHhHHHHHHHHHHhhcCCCC--ceeeeeeeee
Q 036266 168 SVYKWIFLDETNVAIKVFNLQL--------------------------ERAFRSFDSKCEVHKNVRHR--NLIKILTTIA 219 (312)
Q Consensus 168 ~Vy~~~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~ 219 (312)
.||.|...++..+|||+.+... ........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 4899998889999999885421 01123457899999999765 455555442
Q ss_pred ecccccEEEEecccC--CC---CHH-------HHHHHHHHHHHHHHH-HhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 220 ILILKPWYLSSCVMP--NG---DFP-------ERLNIMIDMALAFEY-LHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~--~g---~~~-------~~~~i~~~i~~~l~y-lH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
.-+++|||++ +. .+. +...++.+++..+.. +| ..+|+|+|+.+.||+++++ .+.++||
T Consensus 80 -----~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 -----RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp -----TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--G
T ss_pred -----CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEec
Confidence 2367888998 33 222 233577888885555 57 8899999999999999887 9999999
Q ss_pred cchhhh
Q 036266 287 NISKLL 292 (312)
Q Consensus 287 G~a~~~ 292 (312)
|.|...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 987653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6e-11 Score=99.72 Aligned_cols=123 Identities=24% Similarity=0.300 Sum_probs=95.2
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
.|+++|||+|.++ .+..+..-++.++.|++|.|.+.. +. .+..+++|+.||||+|.++ .+-+.=..|-++++|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 5788999999998 888888889999999999999983 33 3788899999999999988 555555677889999999
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCc---ccccccccc
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF---SSQSFISNY 132 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l---~~l~~~~n~ 132 (312)
.|.+.. -+.+..|-+|..||+++|+|. .......++++ ..+.+.+|+
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIE-ELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchh-hHHHhcccccccHHHHHhhcCCC
Confidence 998872 357788888999999999987 33333334444 444555555
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.4e-11 Score=104.30 Aligned_cols=109 Identities=32% Similarity=0.296 Sum_probs=54.8
Q ss_pred CCcEEeecCCcccc------cCccccccCCCCCEEeccCCcCCcCCCcCccCCCC---CCEEeCCCCcCCC----CCCcc
Q 036266 3 YILQINLFSNSLSG------SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKD---LTTLFLAGNRSQG----SIPKS 69 (312)
Q Consensus 3 ~L~~l~l~~n~l~~------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~---L~~L~l~~n~l~~----~~p~~ 69 (312)
+|++|++++|.+.+ .++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...
T Consensus 52 ~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~ 131 (319)
T cd00116 52 SLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKG 131 (319)
T ss_pred CceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHH
Confidence 45556665555541 22334455556666666666555444444444443 6666666655542 12223
Q ss_pred ccCC-CCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceee
Q 036266 70 FESL-ASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 70 ~~~l-~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+..+ ++|+.|++++|.+++. ++..+..+++|+.|++++|.++
T Consensus 132 l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 132 LKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred HHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 3444 5556666666655532 2233444455555666555554
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.5e-09 Score=99.05 Aligned_cols=84 Identities=26% Similarity=0.406 Sum_probs=71.4
Q ss_pred hhcCCCCceeeeeeeeeecccccEEEEecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCc-eecCC
Q 036266 203 HKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPM-VHCDL 268 (312)
Q Consensus 203 l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~i-iHrDl 268 (312)
|+.+.|.|+.+++|.+... ...+.+-+||..|++.+.+ .++++++.|++|+|+ .+| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeee
Confidence 4678999999999998854 5667777799999776654 488999999999994 444 99999
Q ss_pred CCCCeeeCCCCceEEccccchhh
Q 036266 269 KPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 269 kp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++.|.++|....+|++|||+...
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~ 98 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSL 98 (484)
T ss_pred ccccceeeeeEEEEechhhhccc
Confidence 99999999999999999998654
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-10 Score=98.37 Aligned_cols=109 Identities=28% Similarity=0.289 Sum_probs=91.8
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+|.++.|++|+|.+. .+.. +..|.+|+.||||+|.++ .+..+=.++.++++|.|++|.+. .+ ..++.|-+|..||
T Consensus 306 ~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE-~L-SGL~KLYSLvnLD 380 (490)
T KOG1259|consen 306 APKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE-TL-SGLRKLYSLVNLD 380 (490)
T ss_pred ccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh-hh-hhhHhhhhheecc
Confidence 478999999999998 5554 899999999999999998 56666678899999999999987 32 4578899999999
Q ss_pred ccCCccCCC-cchhHhhcCCCcEEEeeCceeeccC
Q 036266 81 LSSNNLSGK-IPKSLEALSNLKELNVSYNRLEGEI 114 (312)
Q Consensus 81 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~~~~~~ 114 (312)
+++|++... --..+++|+.|+++.|.+|.+.+.+
T Consensus 381 l~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 381 LSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999999732 1257889999999999999998433
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=98.91 E-value=3e-10 Score=100.44 Aligned_cols=132 Identities=23% Similarity=0.261 Sum_probs=99.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCC---CCEEeccCCcCCc----CCCcCccCC-CCCCEEeCCCCcCCCC----CCc
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKV---LIGLDLSINRLYG----DIPITISGL-KDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~---L~~L~l~~N~l~~----~~p~~~~~l-~~L~~L~l~~n~l~~~----~p~ 68 (312)
+++|+.|+|++|.+.+..+..+..+.+ |+.|++++|++++ .+...+..+ ++|+.|++++|.+++. ++.
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 468999999999998777777777766 9999999999873 344456667 8999999999999853 344
Q ss_pred cccCCCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeeccCCC-----CccCCCcccccccccc
Q 036266 69 SFESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGEIPT-----NVPFGNFSSQSFISNY 132 (312)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~~~p~-----~~~~~~l~~l~~~~n~ 132 (312)
.+..+.+|++|++++|.+++. ++..+..+++|++|++++|.+++..+. ....+++..+.+.+|.
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~ 232 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNN 232 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCc
Confidence 567788999999999999853 344566667999999999988643211 1234567777776654
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.88 E-value=7.3e-11 Score=88.07 Aligned_cols=125 Identities=22% Similarity=0.221 Sum_probs=93.8
Q ss_pred CcEEeecCCcccccCccccc---cCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 4 ILQINLFSNSLSGSLPSNIQ---NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+-.++|+++.|. -+++... ....|+..+|++|.+....|..-.+.+-+++|+|++|.++ .+|..+..++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 456788888876 5666554 4456666799999998544444445568999999999998 8898999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++.|.+. ..|..+..|.+|..|+..+|.+. .+|...-.+++..+.-.+|.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgne 156 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNE 156 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCC
Confidence 9999998 78888888999999999888876 66654434444444333443
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=98.87 E-value=3.4e-09 Score=85.27 Aligned_cols=61 Identities=23% Similarity=0.202 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------------------------
Q 036266 237 DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------------------------ 292 (312)
Q Consensus 237 ~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------------------------ 292 (312)
++.+...++.|++.||+||| +.+ ||+||+++.++.+|+ ||+++..
T Consensus 15 ~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~ 83 (176)
T smart00750 15 NEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFMAPEVIQGQSYTE 83 (176)
T ss_pred CHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeeccccCCCcccccChHHhcCCCCcc
Confidence 67888999999999999999 555 999999999999999 9987642
Q ss_pred -------hhhhhhhhcCCCCCcc
Q 036266 293 -------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+.+
T Consensus 84 ~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 84 KADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred hhhHHHHHHHHHHHHhCCCCccc
Confidence 8999999999999754
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-09 Score=99.95 Aligned_cols=105 Identities=42% Similarity=0.611 Sum_probs=74.5
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.|++++|++. .+|..++.++.|+.|++++|++. .+|...+.+++|+.|++++|+++ .+|.....+..|++++++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 6888888888887 67677888888888888888887 56666667788888888888887 667665556667777777
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+|.+. ..|..+.++..+..+.+.+|++.
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~ 245 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLE 245 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceee
Confidence 77433 34555555555555555555554
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.8e-09 Score=98.61 Aligned_cols=122 Identities=32% Similarity=0.452 Sum_probs=80.0
Q ss_pred CCCcEEeecCCcccccCccccccCC-CCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLK-VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+.++.|++.+|+++ .+|.....++ +|+.|++++|++. .+|..+..+++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 35677777777777 6666666664 7777777777776 56566777777777777777777 6666666677777777
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQS 127 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~ 127 (312)
+++|+++ .+|.....+..|++|.+++|.+...+.....+..+..+.
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~ 238 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLE 238 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccc
Confidence 7777777 566665555667777777774332333333333343333
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.6e-08 Score=81.94 Aligned_cols=121 Identities=10% Similarity=0.048 Sum_probs=81.9
Q ss_pred EEEEEEEEcCCcEEEEEEeehhh-hHhH----------HHHHHHHHHhhcCCCCcee--eeeeeeeecc---cccEEEEe
Q 036266 167 GSVYKWIFLDETNVAIKVFNLQL-ERAF----------RSFDSKCEVHKNVRHRNLI--KILTTIAILI---LKPWYLSS 230 (312)
Q Consensus 167 g~Vy~~~~~~~~~vavK~~~~~~-~~~~----------~~~~~e~~~l~~l~h~niv--~~~~~~~~~~---~~~~~l~~ 230 (312)
..|++..+ +|+.|.||...... .... ..+.+|.+.+.++...+|. +++++..... ...-++++
T Consensus 36 rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 36 RRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred ceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 34556544 56789999774322 1111 1367898888777543333 3334433211 23456888
Q ss_pred cccCCC-CHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-------CCceEEccccc
Q 036266 231 CVMPNG-DFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-------DMVAHVSDFNI 288 (312)
Q Consensus 231 ~~~~~g-~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-------~~~~kl~DFG~ 288 (312)
|++++- ++. .+..++.++++.+.-|| ..+|+|+|+++.|||++. +..+.++||+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r 191 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHR 191 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCc
Confidence 888865 432 23368889999999999 999999999999999975 46899999998
Q ss_pred hhh
Q 036266 289 SKL 291 (312)
Q Consensus 289 a~~ 291 (312)
++.
T Consensus 192 ~~~ 194 (268)
T PRK15123 192 AQI 194 (268)
T ss_pred ccc
Confidence 744
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-09 Score=104.09 Aligned_cols=137 Identities=21% Similarity=0.359 Sum_probs=103.4
Q ss_pred ccccccceEeccCCcEEEEEEEEcC--CcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD--ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 226 (312)
...|...+.+|+|+|+.|-.+.... ...+|+|.+.... .........|..+-..+. |+|++.+++.... ....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--~~~~ 96 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--PRSY 96 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC--Cccc
Confidence 4567777889999999887766432 3447777775442 233344455777777777 9999999987663 3345
Q ss_pred EEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~ 291 (312)
++..++..+++....+ .++.|+..++.|+|. ..++.|||+||+|.+++..+ ..|++|||+|..
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 6666677776544333 589999999999995 56799999999999999999 999999999988
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
+
T Consensus 175 ~ 175 (601)
T KOG0590|consen 175 Y 175 (601)
T ss_pred c
Confidence 6
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.73 E-value=1e-07 Score=79.93 Aligned_cols=127 Identities=17% Similarity=0.045 Sum_probs=89.9
Q ss_pred ccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh----------------------hHhHHHHHHHHHHhhcCCCC--ce
Q 036266 156 NEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL----------------------ERAFRSFDSKCEVHKNVRHR--NL 211 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--ni 211 (312)
.....||-|.=+.||.|....|.++|||.=+... ........+|.++|.+|... .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 4567899999999999999889999999643211 01223467899999998754 66
Q ss_pred eeeeeeeeecccccEEEEecccCCCCHHH-------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEc
Q 036266 212 IKILTTIAILILKPWYLSSCVMPNGDFPE-------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 212 v~~~~~~~~~~~~~~~l~~~~~~~g~~~~-------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~ 284 (312)
.+.+++- .-+++||++++-.+.. .-.+...|++-+.-.- ..+|||+|+.+-||+++++|.+.++
T Consensus 174 P~P~~~n------RHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vI 244 (304)
T COG0478 174 PKPIAWN------RHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDIVVI 244 (304)
T ss_pred CCccccc------cceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecCCCEEEE
Confidence 6666542 2467788887753321 1134444444444444 5679999999999999999999999
Q ss_pred cccchhh
Q 036266 285 DFNISKL 291 (312)
Q Consensus 285 DFG~a~~ 291 (312)
||--+..
T Consensus 245 DwPQ~v~ 251 (304)
T COG0478 245 DWPQAVP 251 (304)
T ss_pred eCccccc
Confidence 9976544
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.72 E-value=7e-08 Score=89.69 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=86.4
Q ss_pred cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCCCC--HHH-----HHHHHHH
Q 036266 175 LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD--FPE-----RLNIMID 247 (312)
Q Consensus 175 ~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g~--~~~-----~~~i~~~ 247 (312)
.++..|.|...+...........+-++.++.+|||||+++++.+.. ...+|+++|-+.--+ |.+ ..-.+.|
T Consensus 35 ~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~Pl~~~lk~l~~~~v~~Gl~q 112 (690)
T KOG1243|consen 35 ADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVRPLETVLKELGKEEVCLGLFQ 112 (690)
T ss_pred ccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccccHHHHHHHhHHHHHHHHHHH
Confidence 4677888888876554334456677889999999999999998874 346788888664321 111 1236799
Q ss_pred HHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 248 i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
|+.||.|||+ +.+++|++|.-..|+++..|+-||++|-++
T Consensus 113 Il~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v 152 (690)
T KOG1243|consen 113 ILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELV 152 (690)
T ss_pred HHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence 9999999986 678999999999999999999999988765
|
|
| >KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.68 E-value=8.2e-10 Score=82.52 Aligned_cols=109 Identities=22% Similarity=0.283 Sum_probs=89.1
Q ss_pred CCcEEeecCCcccccCcccccc-CCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 3 YILQINLFSNSLSGSLPSNIQN-LKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.|+.++|++|.|. ..|+.|.. .+.++.|++++|.++ .+|..+..++.|+.|++++|.+. ..|..+..|.+|..||.
T Consensus 54 el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 54 ELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDS 130 (177)
T ss_pred eEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcC
Confidence 5788999999999 67777754 458999999999999 78999999999999999999998 78988888999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
.+|.+. ++|-.+..-+..-..++.++.+.+.-|
T Consensus 131 ~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 131 PENARA-EIDVDLFYSSLPALIKLGNEPLGDETK 163 (177)
T ss_pred CCCccc-cCcHHHhccccHHHHHhcCCcccccCc
Confidence 999998 677665543444444556666665444
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.2e-10 Score=105.35 Aligned_cols=125 Identities=25% Similarity=0.319 Sum_probs=74.1
Q ss_pred CcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc-cccCCCCCCEEecc
Q 036266 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK-SFESLASLEFLDLS 82 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~l~ 82 (312)
|...+.+.|.|. .+..++.-|+.|+.|+|+.|++...- .+..|+.|+.|||++|++. .+|. +...+. |..|.++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 455566677766 66666777777777777777776332 5666777777777777776 4442 233344 7777777
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeecc--CCCCccCCCccccccccccccc
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGE--IPTNVPFGNFSSQSFISNYALC 135 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~--~p~~~~~~~l~~l~~~~n~~l~ 135 (312)
+|.++. + ..+.+|.+|+.||+++|-+.+- +-.-..+..+..+++.||+.-|
T Consensus 241 nN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 777662 2 3566677777777777766531 1011223344555666666333
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.6e-08 Score=91.30 Aligned_cols=138 Identities=20% Similarity=0.210 Sum_probs=101.7
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--CCcEEEEEEeehhhhHhHHH--HHHHHHHhhcC-CCCceeeeeeeeeecccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--DETNVAIKVFNLQLERAFRS--FDSKCEVHKNV-RHRNLIKILTTIAILILK 224 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 224 (312)
....+|..+..+|.+.|+.|+++..+ ++..|++|...........+ -..|+.+...+ .|.+++..+..+.. ..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~--~r 339 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ--LR 339 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--cc
Confidence 34557888999999999999988743 56779999886543222111 23455555544 37888877665542 33
Q ss_pred cEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccchhh
Q 036266 225 PWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a~~ 291 (312)
..++-.||+.+++... +++...|++.++.++| ++.++|+|+||+||++..+ +.-+++|||+++.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhccccccccc
Confidence 4557778998885433 3468899999999999 9999999999999999875 8889999999874
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
+
T Consensus 417 ~ 417 (524)
T KOG0601|consen 417 L 417 (524)
T ss_pred c
Confidence 3
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.5e-09 Score=99.61 Aligned_cols=105 Identities=36% Similarity=0.357 Sum_probs=86.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcC-ccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPIT-ISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
|+.|+.|||++|++. ... .+..|++|+.|||+.|.+. .+|.. ..++. |+.|++++|-++. + ..+.+|.+|+.|
T Consensus 186 l~ale~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lrnN~l~t-L-~gie~LksL~~L 259 (1096)
T KOG1859|consen 186 LPALESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLRNNALTT-L-RGIENLKSLYGL 259 (1096)
T ss_pred HHHhhhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeeecccHHHh-h-hhHHhhhhhhcc
Confidence 478999999999999 444 7899999999999999999 55543 34444 9999999999983 3 357789999999
Q ss_pred eccCCccCCCc-chhHhhcCCCcEEEeeCceee
Q 036266 80 DLSSNNLSGKI-PKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 80 ~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~~~ 111 (312)
||+.|-|.+.- -.-++.|..|+.|+|.+|.+-
T Consensus 260 DlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 260 DLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred chhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99999998632 245678889999999999885
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.55 E-value=4.4e-07 Score=82.18 Aligned_cols=133 Identities=18% Similarity=0.148 Sum_probs=101.1
Q ss_pred EEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeee--cccccEEEEecccCCC-C-----
Q 036266 167 GSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI--LILKPWYLSSCVMPNG-D----- 237 (312)
Q Consensus 167 g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--~~~~~~~l~~~~~~~g-~----- 237 (312)
.+.|++.. .||..|++|++.............-+++++++.|+|+|++.++|.. -+..-++++++|.|+. +
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 46788884 4789999999954433333233455788999999999999988763 2345688899988864 1
Q ss_pred ----------------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 238 ----------------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 238 ----------------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
-.....++.|+..||.++| +.|..-+-+.|.+|+++.+.+++|+-.|+...+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 1234469999999999999 778888999999999999888998877765443
Q ss_pred ----------------hhhhhhhhcC
Q 036266 293 ----------------GVLLPETFTR 302 (312)
Q Consensus 293 ----------------g~~~~e~~tg 302 (312)
|.++.-+.||
T Consensus 447 ~~~~le~~Qq~D~~~lG~ll~aLAt~ 472 (655)
T KOG3741|consen 447 PTEPLESQQQNDLRDLGLLLLALATG 472 (655)
T ss_pred CCcchhHHhhhhHHHHHHHHHHHhhc
Confidence 7777777777
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.48 E-value=2.1e-08 Score=88.44 Aligned_cols=111 Identities=28% Similarity=0.246 Sum_probs=63.4
Q ss_pred CCCCcEEeecCCcccccCc--cccccCCCCCEEeccCCcCCcCCCcCc-cCCCCCCEEeCCCCcCCCCC-CccccCCCCC
Q 036266 1 LEYILQINLFSNSLSGSLP--SNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSI-PKSFESLASL 76 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L 76 (312)
|++++.||||+|-|..--| .-...|++|+.|+|+.|++.-...... ..+++|+.|.|+.|.+++.. -...-.+|+|
T Consensus 145 ~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl 224 (505)
T KOG3207|consen 145 LPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSL 224 (505)
T ss_pred CCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcH
Confidence 4677788888887763322 224577788888888887764332222 23566777777777776431 1122345666
Q ss_pred CEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 77 EFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 77 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+.|+|+.|...+.-.....-+..|+.|||++|++-
T Consensus 225 ~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li 259 (505)
T KOG3207|consen 225 EVLYLEANEIILIKATSTKILQTLQELDLSNNNLI 259 (505)
T ss_pred HHhhhhcccccceecchhhhhhHHhhccccCCccc
Confidence 66666666422222333344455666666666554
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.47 E-value=8.1e-08 Score=94.85 Aligned_cols=104 Identities=29% Similarity=0.349 Sum_probs=51.2
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCc--CCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINR--LYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~--l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
++..+-+|.+. .++....+ +.|++|-+..|. +....+..|..|+.|+.|||++|.=-+.+|.+++.|.+|++|+|+
T Consensus 526 rr~s~~~~~~~-~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~ 603 (889)
T KOG4658|consen 526 RRMSLMNNKIE-HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLS 603 (889)
T ss_pred eEEEEeccchh-hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccccc
Confidence 34444444444 33332222 245555555554 332333334455555555555555444555555555555555555
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+..++ .+|..+.+|..|.+||+..+...
T Consensus 604 ~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l 631 (889)
T KOG4658|consen 604 DTGIS-HLPSGLGNLKKLIYLNLEVTGRL 631 (889)
T ss_pred CCCcc-ccchHHHHHHhhheecccccccc
Confidence 55555 45555555555555555554433
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.4e-07 Score=57.08 Aligned_cols=37 Identities=30% Similarity=0.468 Sum_probs=26.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLY 39 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 39 (312)
++|++|+|++|+|+ .+|+.+++|++|+.|++++|+++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 46777777777777 56666777777777777777776
|
... |
| >COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.46 E-value=2.1e-06 Score=71.45 Aligned_cols=124 Identities=17% Similarity=0.113 Sum_probs=82.1
Q ss_pred EeccCCcEEEEEEEEcCCcEEEEEEeehhhhHh------------------------HHHHHHHHHHhhcCC--CCceee
Q 036266 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLERA------------------------FRSFDSKCEVHKNVR--HRNLIK 213 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------~~~~~~e~~~l~~l~--h~niv~ 213 (312)
.|++|.-+.||+|...++..+|||+++...... ......|..-|+++. +=.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 555677778999987788899999997543110 111234555555543 222333
Q ss_pred eeeeeeecccccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCce
Q 036266 214 ILTTIAILILKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281 (312)
Q Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~ 281 (312)
.+.+. .-+++|||+... ...+...+..++++.+.-|-. ..++||+||..-|||+. ++.+
T Consensus 135 Pi~~~------~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 135 PIAFR------NNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred ceeec------CCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeE
Confidence 33322 246778887654 111344567777777777762 47899999999999999 7899
Q ss_pred EEccccchhhh
Q 036266 282 HVSDFNISKLL 292 (312)
Q Consensus 282 kl~DFG~a~~~ 292 (312)
.++|||-|...
T Consensus 206 ~iID~~QaV~~ 216 (268)
T COG1718 206 YIIDVSQAVTI 216 (268)
T ss_pred EEEECcccccc
Confidence 99999977554
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.2e-08 Score=90.32 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=57.4
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
.....++|.....+|.|+||+|+.+.... +..+|||.|.... .....+..+|+..+.++.|++++++...|.
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~ 117 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWY 117 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheecee
Confidence 44556788999999999999999998654 4579999997644 455566788999999999999999876553
|
|
| >PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.6e-07 Score=56.86 Aligned_cols=36 Identities=36% Similarity=0.555 Sum_probs=15.5
Q ss_pred CCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccC
Q 036266 51 DLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLS 87 (312)
Q Consensus 51 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 87 (312)
+|++|++++|+++ .+|..+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 33434444444444444444444
|
... |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.5e-07 Score=92.90 Aligned_cols=107 Identities=26% Similarity=0.286 Sum_probs=93.5
Q ss_pred CCCcEEeecCCc--ccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 2 EYILQINLFSNS--LSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~--l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
++|++|-+..|. +....+..|..++.|..|||++|.=-+.+|..++.|-+|++|+|++..++ .+|..+++|..|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 468899999996 55344445888999999999998877899999999999999999999998 899999999999999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCce
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNR 109 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 109 (312)
|+..+.-...+|.....|++|++|.+....
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccc
Confidence 999987665678888889999999986654
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.8e-06 Score=71.40 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=68.3
Q ss_pred HHHHHHHHHhhcCCCCc--eeeeeeeeeecc--cccEEEEecccCCC-CHH------------HHHHHHHHHHHHHHHHh
Q 036266 194 RSFDSKCEVHKNVRHRN--LIKILTTIAILI--LKPWYLSSCVMPNG-DFP------------ERLNIMIDMALAFEYLH 256 (312)
Q Consensus 194 ~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~--~~~~~l~~~~~~~g-~~~------------~~~~i~~~i~~~l~ylH 256 (312)
....+|...+..+.... +.+.+++..... ....++++|++++- ++. ....++.++++.++-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 34677877776665333 333444443211 23457788888764 332 23468999999999999
Q ss_pred CCCCCCceecCCCCCCeeeCCCC---ceEEccccchhhh
Q 036266 257 HGRSTPMVHCDLKPSNNLLDEDM---VAHVSDFNISKLL 292 (312)
Q Consensus 257 ~~~~~~iiHrDlkp~Nill~~~~---~~kl~DFG~a~~~ 292 (312)
..+|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 136 ---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 136 ---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred ---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999776 8999999876553
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172 | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.7e-06 Score=69.96 Aligned_cols=127 Identities=13% Similarity=0.120 Sum_probs=82.4
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCce--eeeeeeeeecccccEEEEecccC
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL--IKILTTIAILILKPWYLSSCVMP 234 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~~~l~~~~~~ 234 (312)
.+..+++|..+.||+. .+..+++|...... ......+|.++++.+..-.+ .+.+++... .....++|++++
T Consensus 5 ~~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv~e~i~ 77 (226)
T TIGR02172 5 DWTQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLIYELIV 77 (226)
T ss_pred HheeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeeeeeecC
Confidence 3468899999999984 24467888886533 22446789988888764333 444555432 223456788988
Q ss_pred CCC-H--------HHHHHHHHHHHHHHHHHhC----------------------------------------CCCCCcee
Q 036266 235 NGD-F--------PERLNIMIDMALAFEYLHH----------------------------------------GRSTPMVH 265 (312)
Q Consensus 235 ~g~-~--------~~~~~i~~~i~~~l~ylH~----------------------------------------~~~~~iiH 265 (312)
|.+ . .....++.++++.+.-+|. .....++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 853 1 1112344444444444441 01235689
Q ss_pred cCCCCCCeeeCCCCceEEccccchhh
Q 036266 266 CDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 266 rDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|+.|.||++++++ +.++||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998765
|
This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.2e-07 Score=85.28 Aligned_cols=134 Identities=21% Similarity=0.223 Sum_probs=96.4
Q ss_pred cccccceEecc--CCcEEEEEEEE--c-CCcEEEEEEeeh--hhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccc
Q 036266 153 DEFNEWHLLGT--ESLGSVYKWIF--L-DETNVAIKVFNL--QLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILK 224 (312)
Q Consensus 153 ~~~~~~~~lg~--G~~g~Vy~~~~--~-~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 224 (312)
..+.....+|. |.+|.+|.+.. + ++..+|+|.-+. ........-.+|+....+++ |+|.++.+..+.. ..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~--~~ 191 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG--SG 191 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc--CC
Confidence 34566678898 99999999886 3 567799998433 22233333456777777775 9999997776663 44
Q ss_pred cEEEEecccCCCCHH-------------HHHHHHHHHHH----HHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccc
Q 036266 225 PWYLSSCVMPNGDFP-------------ERLNIMIDMAL----AFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDF 286 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~-------------~~~~i~~~i~~----~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DF 286 (312)
..++..|.+.. ++. ....+..+..+ |+.++| ..+++|-|+||+||++..+ ...+++||
T Consensus 192 ~lfiqtE~~~~-sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 192 ILFIQTELCGE-SLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred cceeeeccccc-hhHHhhhcccccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence 45666666653 222 12246666666 999999 8999999999999999988 88999999
Q ss_pred cchhhh
Q 036266 287 NISKLL 292 (312)
Q Consensus 287 G~a~~~ 292 (312)
|+...+
T Consensus 268 ~~v~~i 273 (524)
T KOG0601|consen 268 GLVSKI 273 (524)
T ss_pred ceeEEc
Confidence 987665
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=7.2e-06 Score=67.15 Aligned_cols=126 Identities=17% Similarity=0.053 Sum_probs=85.6
Q ss_pred ccCCcEEEEEEEEcCCcEEEEEEeehhh------hHhHHHHHHHHHHhhcCCCCc--eeeeeeeee---ecccccEEEEe
Q 036266 162 GTESLGSVYKWIFLDETNVAIKVFNLQL------ERAFRSFDSKCEVHKNVRHRN--LIKILTTIA---ILILKPWYLSS 230 (312)
Q Consensus 162 g~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~---~~~~~~~~l~~ 230 (312)
+.||.+-|++..+ +|+.+=+|.-.... +.....|.+|...+.++...+ +.++. ++. .......++++
T Consensus 27 ~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 5678888888665 34467788765221 224567899999888885332 33333 221 12233345666
Q ss_pred cccCCC-CH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc--eEEccccchhhh
Q 036266 231 CVMPNG-DF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV--AHVSDFNISKLL 292 (312)
Q Consensus 231 ~~~~~g-~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~--~kl~DFG~a~~~ 292 (312)
|-+++- ++ ..+..+..++++.++-|| ..++.|+|+-+.||+++.++. ++++||--++..
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~ 180 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR 180 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence 644432 22 233579999999999999 999999999999999986666 999999876653
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.6e-07 Score=86.24 Aligned_cols=104 Identities=33% Similarity=0.434 Sum_probs=57.1
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|..|++.+|+|. .+...+..+++|+.|++++|.|+...+ +..++.|+.|++++|.++ .+ ..+..+++|+.+++
T Consensus 95 ~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~-~~~~~l~~L~~l~l 169 (414)
T KOG0531|consen 95 KSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-DI-SGLESLKSLKLLDL 169 (414)
T ss_pred cceeeeeccccchh-hcccchhhhhcchheeccccccccccc--hhhccchhhheeccCcch-hc-cCCccchhhhcccC
Confidence 45566666666666 333335556666666666666654332 444555666666666665 22 23444566666666
Q ss_pred cCCccCCCcchh-HhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIPKS-LEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p~~-~~~l~~L~~L~l~~N~~~ 111 (312)
++|.++. ++.. ...+.+++.+.+++|.+.
T Consensus 170 ~~n~i~~-ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 170 SYNRIVD-IENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred Ccchhhh-hhhhhhhhccchHHHhccCCchh
Confidence 6666653 2221 355556666666666554
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.33 E-value=3e-06 Score=78.90 Aligned_cols=136 Identities=17% Similarity=0.178 Sum_probs=84.7
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHh----H--------------------------H------
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERA----F--------------------------R------ 194 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~--------------------------~------ 194 (312)
...+|+. +.++.++.|+||+|++++|+.||||+.+....+. . +
T Consensus 124 ~F~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 124 LFSEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred HHHHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 3444543 5889999999999999999999999986532110 0 0
Q ss_pred ----HHHHHHHHhhcCC-----CCceeeeeeeeeecccccEEEEecccCCCCHHHH----------HHHHHHHHHHH-HH
Q 036266 195 ----SFDSKCEVHKNVR-----HRNLIKILTTIAILILKPWYLSSCVMPNGDFPER----------LNIMIDMALAF-EY 254 (312)
Q Consensus 195 ----~~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~~----------~~i~~~i~~~l-~y 254 (312)
++.+|..-+.+++ .+++.-..-++. ....-+++|||++|-.+.+. ..++..++++. .-
T Consensus 203 ~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we--~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q 280 (517)
T COG0661 203 REELDYRREAANAERFRENFKDDPDVYVPKVYWE--YTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQ 280 (517)
T ss_pred HHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehh--ccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 1233444443332 232221111111 12345788999998643322 13444444332 11
Q ss_pred HhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 255 LHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 255 lH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+- ..+..|.|..|-||+++.+|+..+.|||+...+
T Consensus 281 ~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 281 LL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HH---hcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 22 457999999999999999999999999987664
|
|
| >PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.1e-06 Score=68.49 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=78.4
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCC--ceeeeeeeeeecc-cccEEEEecccC
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHR--NLIKILTTIAILI-LKPWYLSSCVMP 234 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~-~~~~~l~~~~~~ 234 (312)
.+.++.|..+.||+....+ +.+++|..... .....+.+|..+++.+... .+.+++.+..... ....+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4678899999999998766 68999998765 3445677888888777533 2445555332222 223577788887
Q ss_pred CCCHHH------HHHH--------------------------------------------------HHHHHH-HHHHHhC
Q 036266 235 NGDFPE------RLNI--------------------------------------------------MIDMAL-AFEYLHH 257 (312)
Q Consensus 235 ~g~~~~------~~~i--------------------------------------------------~~~i~~-~l~ylH~ 257 (312)
+.++.. ...+ ...+.+ .++.++.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 663322 0000 111222 2233321
Q ss_pred ----CCCCCceecCCCCCCeeeC-CCCceEEccccchhh
Q 036266 258 ----GRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKL 291 (312)
Q Consensus 258 ----~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~ 291 (312)
.....++|+|+.|.||+++ +++.+.++||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1256799999999999999 666668999998755
|
; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B .... |
| >PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY) | Back alignment and domain information |
|---|
Probab=98.30 E-value=7.3e-06 Score=67.42 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=84.3
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHH---------HHHHHHHhhcCCCCc---eeeeeeee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRS---------FDSKCEVHKNVRHRN---LIKILTTI 218 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~n---iv~~~~~~ 218 (312)
...+|...+.+.......|.+-. -+++.+.+|..+.......+. ..+++....+++... .+.++.+.
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIe-i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIE-IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEE-ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 34566666666665555444433 367889999887543221111 123333333333222 22222221
Q ss_pred e---ecccccEEEEecccCCCCHHHHH----HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 219 A---ILILKPWYLSSCVMPNGDFPERL----NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 219 ~---~~~~~~~~l~~~~~~~g~~~~~~----~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
. .......+++|||++|-.+.+.. .++..+++++.-+| +.|+.|+|..|.|+++++++ ++++||+..+.
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~~k~~ 183 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQGKRM 183 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECccccc
Confidence 1 11123456889999997654422 35577889999999 99999999999999998654 89999987655
Q ss_pred h
Q 036266 292 L 292 (312)
Q Consensus 292 ~ 292 (312)
.
T Consensus 184 ~ 184 (229)
T PF06176_consen 184 S 184 (229)
T ss_pred c
Confidence 4
|
The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.9e-07 Score=82.58 Aligned_cols=131 Identities=27% Similarity=0.258 Sum_probs=96.1
Q ss_pred CCCCcEEeecCCcccccCcccc-ccCCCCCEEeccCCcCCcC-CCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCE
Q 036266 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGD-IPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEF 78 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 78 (312)
||+|+.|+|+.|+|.-...+.. ..+++|+.|.|+.+.++.. +-.....+|+|..|+|..|.....--.+..-++.|+.
T Consensus 171 Lp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 171 LPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred cccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 6899999999999985555443 4678999999999998742 3334456789999999999633344444556788999
Q ss_pred EeccCCccCCCcc--hhHhhcCCCcEEEeeCceeecc-CCCC------ccCCCcccccccccc
Q 036266 79 LDLSSNNLSGKIP--KSLEALSNLKELNVSYNRLEGE-IPTN------VPFGNFSSQSFISNY 132 (312)
Q Consensus 79 L~l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~~~~~-~p~~------~~~~~l~~l~~~~n~ 132 (312)
|||++|++- ..+ ...+.++.|+.|+++.+.++.. .|+. ..++++.++....|+
T Consensus 251 LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~ 312 (505)
T KOG3207|consen 251 LDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENN 312 (505)
T ss_pred ccccCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCc
Confidence 999999987 444 4567888888888888887642 3333 356677777777765
|
|
| >PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2 | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.2e-05 Score=65.34 Aligned_cols=127 Identities=23% Similarity=0.352 Sum_probs=93.7
Q ss_pred cccccceEeccCCc-EEEEEEEEcCCcEEEEEEeeh---h--------hh----------HhHHHHHHHHHHhhcCC---
Q 036266 153 DEFNEWHLLGTESL-GSVYKWIFLDETNVAIKVFNL---Q--------LE----------RAFRSFDSKCEVHKNVR--- 207 (312)
Q Consensus 153 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~--------~~----------~~~~~~~~e~~~l~~l~--- 207 (312)
..++..+.+|.|.- |.||+++. +|+.+|+|.+.. . .. .....|..|.++..+++
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888899999999 99999987 677999999321 0 00 12345788988887775
Q ss_pred CCce--eeeeeeeeec----------------ccccEEEEecccCCCCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCC
Q 036266 208 HRNL--IKILTTIAIL----------------ILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLK 269 (312)
Q Consensus 208 h~ni--v~~~~~~~~~----------------~~~~~~l~~~~~~~g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlk 269 (312)
+.++ |+.+||..-. ......++.||++... .-..+-+.+|.+-+..+| ..+|+-+|+|
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-~~~~~~~~~~~~dl~~~~---k~gI~~~Dv~ 191 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-PLQIRDIPQMLRDLKILH---KLGIVPRDVK 191 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-ccchhHHHHHHHHHHHHH---HCCeeeccCc
Confidence 4455 8999987322 1223567888887765 223345678888899999 9999999999
Q ss_pred CCCeeeCCCCceEEccccch
Q 036266 270 PSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 270 p~Nill~~~~~~kl~DFG~a 289 (312)
+.|.. .-||+|||.+
T Consensus 192 ~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 192 PRNYR-----GGKLVDFSSS 206 (207)
T ss_pred ccccc-----CCEEEecccC
Confidence 99985 4589999864
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 312 | ||||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 2e-14 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 3e-14 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-11 | ||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 6e-10 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-09 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 2e-07 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 2e-07 | ||
| 3kj4_A | 286 | Structure Of Rat Nogo Receptor Bound To 1d9 Antagon | 9e-05 | ||
| 3rg1_A | 612 | Crystal Structure Of The Rp105MD-1 Complex Length = | 1e-04 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-04 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 2e-04 | ||
| 4g8a_A | 635 | Crystal Structure Of Human Tlr4 Polymorphic Variant | 2e-04 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 2e-04 | ||
| 3fxi_A | 605 | Crystal Structure Of The Human Tlr4-Human Md-2-E.Co | 2e-04 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 3e-04 | ||
| 2z66_A | 306 | Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 A | 3e-04 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 3e-04 | ||
| 3b2d_A | 603 | Crystal Structure Of Human Rp105MD-1 Complex Length | 3e-04 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 4e-04 | ||
| 1p8v_A | 279 | Crystal Structure Of The Complex Of Platelet Recept | 5e-04 | ||
| 2wfh_A | 193 | The Human Slit 2 Dimerization Domain D4 Length = 19 | 5e-04 | ||
| 1ook_G | 290 | Crystal Structure Of The Complex Of Platelet Recept | 5e-04 | ||
| 1p9a_G | 290 | Crystal Structure Of N-terminal Domain Of Human Pla | 5e-04 | ||
| 1gwb_B | 281 | Structure Of Glycoprotein 1b Length = 281 | 5e-04 | ||
| 3pmh_G | 290 | Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib | 5e-04 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 6e-04 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 6e-04 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 6e-04 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 6e-04 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 6e-04 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 6e-04 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 6e-04 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 6e-04 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 6e-04 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 6e-04 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 6e-04 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 6e-04 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 6e-04 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 6e-04 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 6e-04 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 6e-04 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 6e-04 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 6e-04 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 6e-04 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 6e-04 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 7e-04 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 7e-04 |
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist Antibody Length = 286 | Back alignment and structure |
|
| >pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex Length = 612 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g And T399i In Complex With Md-2 And Lps Length = 635 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex Length = 605 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 306 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex Length = 603 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor Gpib-alpha And Alpha-thrombin At 2.6a Length = 279 | Back alignment and structure |
|
| >pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4 Length = 193 | Back alignment and structure |
|
| >pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor Gpib-alpha And Human Alpha-thrombin Length = 290 | Back alignment and structure |
|
| >pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet Receptor Glycoprotein Ib-alpha At 1.7 Angstrom Resolution Length = 290 | Back alignment and structure |
|
| >pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b Length = 281 | Back alignment and structure |
|
| >pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib Interaction With Two Distinct Alpha-Thrombin Sites Length = 290 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 5e-43
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ + N L+G +P NL L +DLS N L GD + K+ + LA N +
Sbjct: 179 MTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL 237
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
+L LDL +N + G +P+ L L L LNVS+N L GEIP F
Sbjct: 238 G-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVS 296
Query: 127 SFISNYALC 135
++ +N LC
Sbjct: 297 AYANNKCLC 305
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-31
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 4/126 (3%)
Query: 1 LEYILQINLFS-NSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
L Y+ + + N+L G +P I L L L ++ + G IP +S +K L TL +
Sbjct: 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSY 134
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKE-LNVSYNRLEGEIPTNV 118
N G++P S SL +L + N +SG IP S + S L + +S NRL G+IP
Sbjct: 135 NALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT- 193
Query: 119 PFGNFS 124
F N +
Sbjct: 194 -FANLN 198
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 8e-31
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 6 QINLFSNSLSGS--LPSNIQNLKVLIGLDLS-INRLYGDIPITISGLKDLTTLFLAGNRS 62
++L +L +PS++ NL L L + IN L G IP I+ L L L++
Sbjct: 54 NLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNV 113
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
G+IP + +L LD S N LSG +P S+ +L NL + NR+ G IP + +G+
Sbjct: 114 SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS--YGS 171
Query: 123 FSS 125
FS
Sbjct: 172 FSK 174
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-24
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 5/117 (4%)
Query: 12 NSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI--TISGLKDLTTLFLAG-NRSQGSIPK 68
+ G L + LDLS L PI +++ L L L++ G N G IP
Sbjct: 36 RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPP 95
Query: 69 SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ L L +L ++ N+SG IP L + L L+ SYN L G +P + + +
Sbjct: 96 AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPS--ISSLPN 150
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 54.5 bits (132), Expect = 1e-08
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ + ++L +N + G+LP + LK L L++S N L G+IP L+ A N
Sbjct: 243 SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANN 301
Query: 61 RSQGSIP 67
+ P
Sbjct: 302 KCLCGSP 308
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 3e-41
Identities = 50/135 (37%), Positives = 65/135 (48%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L N+ S G N ++ LD+S N L G IP I + L L L N
Sbjct: 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHN 666
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
GSIP L L LDLSSN L G+IP+++ AL+ L E+++S N L G IP F
Sbjct: 667 DISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726
Query: 121 GNFSSQSFISNYALC 135
F F++N LC
Sbjct: 727 ETFPPAKFLNNPGLC 741
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 4e-31
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N LSG++PS++ +L L L L +N L G+IP + +K L TL L N G I
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEI 482
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
P + +L ++ LS+N L+G+IPK + L NL L +S N G IP G+ S
Sbjct: 483 PSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE--LGDCRS 539
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 7e-31
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ ++ L +N +G +P + N L+ L LS N L G IP ++ L L L L N
Sbjct: 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLN 452
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+G IP+ + +LE L L N+L+G+IP L +NL +++S NRL GEIP
Sbjct: 453 MLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKW--I 510
Query: 121 GNFSS 125
G +
Sbjct: 511 GRLEN 515
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-28
Identities = 40/110 (36%), Positives = 57/110 (51%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L+ N L G +P + +K L L L N L G+IP +S +L + L+ NR G I
Sbjct: 447 LKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEI 506
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
PK L +L L LS+N+ SG IP L +L L+++ N G IP
Sbjct: 507 PKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 5e-28
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 7 INLFSNSLSGSLPSNIQN--LKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
++L SN+ SG + N+ L L L N G IP T+S +L +L L+ N G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+IP S SL+ L L L N L G+IP+ L + L+ L + +N L GEIP+ N +
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG--LSNCT 490
Query: 125 S 125
+
Sbjct: 491 N 491
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 7e-28
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+++ N LSG I L L++S N+ G IP LK L L LA N+ G I
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEI 285
Query: 67 PKSFE-SLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
P + +L LDLS N+ G +P + S L+ L +S N GE+P +
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT-LLKMRG 344
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKV-LIGLDLSINRLYGDIPITI--SGLKDLTTLFL 57
+ + ++L N SG LP ++ NL L+ LDLS N G I + + L L+L
Sbjct: 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401
Query: 58 AGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
N G IP + + + L L LS N LSG IP SL +LS L++L + N LEGEIP
Sbjct: 402 QNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE 461
Query: 118 VPFGNFSS 125
+
Sbjct: 462 --LMYVKT 467
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 6e-26
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ + N +SG + + L LD+S N IP + L L ++GN+ G
Sbjct: 183 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDF 239
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
++ + L+ L++SSN G IP L +L+ L+++ N+ GEIP + G +
Sbjct: 240 SRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFTGEIPDFL-SGACDT 295
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 1e-25
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 7 INLFSNSLSGSLPSNIQ---NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++L +NS+SG+ L L +S N++ GD+ + S +L L ++ N
Sbjct: 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFS 213
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
IP ++L+ LD+S N LSG +++ + LK LN+S N+ G IP
Sbjct: 214 TGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP 265
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L N L+G +PS + N L + LS NRL G+IP I L++L L L+ N G+I
Sbjct: 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNI 530
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
P SL +LDL++N +G IP ++ S ++ N + G+ + +
Sbjct: 531 PAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGK----IAANFIAGKRYVYIKNDGMKKE 586
Query: 127 SFISNYAL 134
+ L
Sbjct: 587 CHGAGNLL 594
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 5e-25
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
Query: 7 INLFSNSLSGSLPSNIQ-NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L N +G +P + L GLDLS N YG +P L +L L+ N G
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALS-NLKELNVSYNRLEGEIPTNVPFGNF 123
+P + + L+ LDLS N SG++P+SL LS +L L++S N G I N+
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 124 SSQSFIS 130
++ +
Sbjct: 394 NTLQELY 400
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 4e-24
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSIN--RLYGDIPITISGLKDLTTLFLAGNRS 62
+ +N ++G I+N + + N G ++ L +
Sbjct: 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVY 620
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
G +F++ S+ FLD+S N LSG IPK + ++ L LN+ +N + G IP G+
Sbjct: 621 GGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE--VGD 678
Query: 123 FSS 125
Sbjct: 679 LRG 681
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 9e-24
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP--ITISGLKDLTTLFLA 58
L + + L ++ ++GS+ + L LDLS N L G + ++ L L ++
Sbjct: 76 LTGLESLFLSNSHINGSVSG-FKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVS 134
Query: 59 GNRSQGSIPKS-FESLASLEFLDLSSNNLSGKIPKSLEA---LSNLKELNVSYNRLEGEI 114
N S L SLE LDLS+N++SG LK L +S N++ G++
Sbjct: 135 SNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV 194
Query: 115 PTNVPFGNFSS 125
+
Sbjct: 195 ----DVSRCVN 201
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-23
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 7 INLFSNSLSGSLP----SNIQNLKVLIGLDLSINRLYGDIPITISGLK-DLTTLFLAGNR 61
+ L SN+ SG LP ++ LKV LDLS N G++P +++ L L TL L+ N
Sbjct: 323 LALSSNNFSGELPMDTLLKMRGLKV---LDLSFNEFSGELPESLTNLSASLLTLDLSSNN 379
Query: 62 SQGSIPKSF--ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
G I + +L+ L L +N +GKIP +L S L L++S+N L G IP++
Sbjct: 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSS-- 437
Query: 120 FGNFSS 125
G+ S
Sbjct: 438 LGSLSK 443
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 3e-22
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 8/127 (6%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
++ ++L +N +G++P+ + ++ N + G + I AGN
Sbjct: 537 CRSLIWLDLNTNLFNGTIPAAMFKQS----GKIAANFIAGKRYVYIKNDGMKKECHGAGN 592
Query: 61 RSQ--GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+ G + L++ +++S G + + ++ L++SYN L G IP
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE- 651
Query: 119 PFGNFSS 125
G+
Sbjct: 652 -IGSMPY 657
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 93.4 bits (233), Expect = 2e-21
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 7 INLFSNSLS---GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
I+L S L+ ++ S++ +L L L LS + + G + LT+L L+ N
Sbjct: 55 IDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLS 113
Query: 64 GSIPKSFE--SLASLEFLDLSSNNLSGKIPKSLEA-LSNLKELNVSYNRLEGEIPTNV-P 119
G + S + L+FL++SSN L S L++L+ L++S N + G
Sbjct: 114 GPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVL 173
Query: 120 FGNFSS 125
Sbjct: 174 SDGCGE 179
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-24
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 33/190 (17%)
Query: 124 SSQSFISNYALCAHQDSKRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIK 183
+S + + + +S R +D+ +AT+ F+ L+G G VYK + D VA+K
Sbjct: 10 NSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK 69
Query: 184 VFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL---TTIAILILKPWYLSSCV---MPNG- 236
+ + F+++ E RH +L+ ++ +IL + M NG
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL--------IYKYMENGN 121
Query: 237 ---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281
+ +RL I I A YLH ++H D+K N LLDE+ V
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVP 178
Query: 282 HVSDFNISKL 291
++DF ISK
Sbjct: 179 KITDFGISKK 188
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 7e-23
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 41/180 (22%)
Query: 141 KRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQ----LERAFRSF 196
KR S ++ A+D F+ ++LG G VYK D T VA+K + E F++
Sbjct: 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT- 76
Query: 197 DSKCEVH--KNVRHRNLIKIL---TTIAILILKPWYLSSCV---MPNG------------ 236
EV HRNL+++ T +L V M NG
Sbjct: 77 ----EVEMISMAVHRNLLRLRGFCMTPTERLL--------VYPYMANGSVASCLRERPES 124
Query: 237 ----DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
D+P+R I + A YLH ++H D+K +N LLDE+ A V DF ++KL+
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 9e-22
Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 26/183 (14%)
Query: 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVH 203
++ + + G V+K VA+K+F + +S+ ++ EV+
Sbjct: 15 GTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFP---IQDKQSWQNEYEVY 70
Query: 204 --KNVRHRNLIKILT--TIAILILKPWYLSSCVMPNG-----------DFPERLNIMIDM 248
++H N+++ + + +L + G + E +I M
Sbjct: 71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETM 130
Query: 249 ALAFEYLH------HGRSTP-MVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFT 301
A YLH P + H D+K N LL ++ A ++DF ++ T
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 302 RKK 304
+
Sbjct: 191 HGQ 193
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-20
Identities = 26/117 (22%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLAG 59
L ++ +++ + L L L ++ N + P + L++LT L L+
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
+ + P +F SL+SL+ L++S NN + L++L+ L+ S N +
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 536
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-20
Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ ++L + Q+L L L L+ N + SGL L L
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
L +L+ L+++ N + S K+P+ L+NL+ L++S N+++ T+
Sbjct: 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD-- 168
Query: 120 FGNFSS 125
Sbjct: 169 LRVLHQ 174
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 6e-20
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+L N L + + L LDLS + L L+TL L GN Q
Sbjct: 34 DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 93
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+F L+SL+ L NL+ + L LKELNV++N ++ F N ++
Sbjct: 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS-FKLPEYFSNLTN 150
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 85.1 bits (211), Expect = 1e-18
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 5/115 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQGS 65
+ L N + L L L L I LK L L +A N
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK----ELNVSYNRLEGEIPT 116
+P+ F +L +LE LDLSSN + L L + L++S N + P
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 195
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 3e-18
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 5/127 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAG 59
+ ++L N + + SN L+ L LD + L ++ L++L L ++
Sbjct: 372 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKI-PKSLEALSNLKELNVSYNRLEGEIPTNV 118
++ + F L+SLE L ++ N+ P L NL L++S +LE PT
Sbjct: 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA- 489
Query: 119 PFGNFSS 125
F + SS
Sbjct: 490 -FNSLSS 495
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 7e-18
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 7/122 (5%)
Query: 5 LQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
+ + +P N+ + K L DLS N L + +L L L+ Q
Sbjct: 10 ITYQCMELNFY-KIPDNLPFSTKNL---DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ 65
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+++SL+ L L L+ N + + LS+L++L L P G+
Sbjct: 66 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENF--PIGHL 123
Query: 124 SS 125
+
Sbjct: 124 KT 125
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 1e-17
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
L ++ S G + L LDLS N + + GL+ L L + +
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLK 409
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
S F SL +L +LD+S + LS+L+ L ++ N + ++ F
Sbjct: 410 QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI-FTE 468
Query: 123 FSS 125
+
Sbjct: 469 LRN 471
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 5e-16
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQG 64
++ +L+ I +LK L L+++ N + +P S L +L L L+ N+ Q
Sbjct: 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
Query: 65 SIPKSFESLASLEF----LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
L + LDLS N ++ P + + + L +L + N +
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTC-I 221
Query: 121 GNFSSQSFISNY 132
+
Sbjct: 222 QGLAGLEVHRLV 233
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L L P+ +L L L++S N + L L L + N S
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 534
Query: 67 PKSFESLA-SLEFLDLSSNNLSGKIPKS--LEALSNLKELNVSYNRLEGEIP 115
+ + SL FL+L+ N+ + L+ + + ++L V R+E P
Sbjct: 535 KQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 586
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 3e-09
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 7 INLFSNSLSGSLPSNIQNLK----VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
++L SN + ++++ L + + LDLS+N + P ++ L L L N
Sbjct: 154 LDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFD 212
Query: 63 QGSIPK-SFESLASLEFLDLSSNNLSGKI---PKSLEALSNLKELNVSYNRL 110
++ K + LA LE L + AL L L + RL
Sbjct: 213 SLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 56.6 bits (137), Expect = 4e-09
Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 11/121 (9%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQ 63
L ++L N ++ P + ++ L L L N ++ I GL L L +
Sbjct: 180 LSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 238
Query: 64 GS------IPKSFESLASLEFLDLSSNNLS---GKIPKSLEALSNLKELNVSYNRLEGEI 114
+ E L +L + L I L+N+ ++ +E
Sbjct: 239 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK 298
Query: 115 P 115
Sbjct: 299 D 299
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 1e-08
Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 24/140 (17%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRL---YGDIPITISGLKDLTTLFLAGNRSQG 64
+L S ++ L L + + L DI + L ++++ L +
Sbjct: 237 FRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER 296
Query: 65 SIPKSFESLASLEFLDLSSNNLS-------------------GKIPKSLEALSNLKELNV 105
S+ + L+L + G S L +L+ L++
Sbjct: 297 VKDFSY--NFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDL 354
Query: 106 SYNRLEGEIPTNVPFGNFSS 125
S N L + + +S
Sbjct: 355 SRNGLSFKGCCSQSDFGTTS 374
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 8e-20
Identities = 35/125 (28%), Positives = 53/125 (42%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ +++ N++S P Q L +L L+L N L T + +LT L L N
Sbjct: 48 YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSN 107
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
Q F +L LDLS N LS + L NL+EL +S N+++ +
Sbjct: 108 SIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDI 167
Query: 121 GNFSS 125
SS
Sbjct: 168 FANSS 172
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.4 bits (217), Expect = 3e-19
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+++L SNS+ + K LI LDLS N L T L++L L L+ N+ Q
Sbjct: 101 ELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160
Query: 66 IPKSFESLA--SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+ + A SL+ L+LSSN + P A+ L L ++ +L + +
Sbjct: 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELA 220
Query: 124 SSQ 126
++
Sbjct: 221 NTS 223
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 4e-19
Identities = 29/125 (23%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
I +NL N L +N L LD+ N + P L L L L N
Sbjct: 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
K+F +L L L SN++ NL L++S+N L
Sbjct: 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG--TQ 141
Query: 121 GNFSS 125
+
Sbjct: 142 VQLEN 146
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-18
Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
L+ ++ G ++ L L L+L N L +L + L N
Sbjct: 518 RLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLE-ALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
F + SL+ L+L N ++ K A NL EL++ +N + + F N+ ++
Sbjct: 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE 637
Query: 127 S-----FISNYALCAH 137
+ +S++ LC
Sbjct: 638 THTNIPELSSHYLCNT 653
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 4e-18
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRL--------YGDIPITISGLKDL 52
L + ++L +N+++ ++ L+ L LDL N L G + GL L
Sbjct: 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHL 538
Query: 53 TTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
L L N + F+ L L+ +DL NNL+ +LK LN+ N +
Sbjct: 539 HILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 598
Query: 113 EIPT 116
Sbjct: 599 VEKK 602
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 9e-18
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSN-IQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
L ++ ++L N + L + L+ + + LS N+ + + + L L L
Sbjct: 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRR 463
Query: 60 NRSQG--SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ S P F+ L +L LDLS+NN++ LE L L+ L++ +N L
Sbjct: 464 VALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-17
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 9/130 (6%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N+L+ + L L L N + ++ GL ++ L L + ++ SI
Sbjct: 253 LDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312
Query: 67 ---------PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
SF+ L LE L++ N++ G L NLK L++S + TN
Sbjct: 313 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTN 372
Query: 118 VPFGNFSSQS 127
F + +
Sbjct: 373 ETFVSLAHSP 382
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 81.6 bits (202), Expect = 2e-17
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 7 INLFSNSLSG--SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR--- 61
+ L +L S PS Q L+ L LDLS N + + GL+ L L L N
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLAR 518
Query: 62 -----SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
+ G + L+ L L+L SN + + L LK +++ N L +
Sbjct: 519 LWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPAS 578
Query: 117 NVPFGNFSS 125
F N S
Sbjct: 579 V--FNNQVS 585
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 4e-17
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
+ ++ SL + Q LK L L++ N + G +GL +L L L+ + +
Sbjct: 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTS 366
Query: 64 GS--IPKSFESLA--SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
++F SLA L L+L+ N +S + L +L+ L++ N + E+
Sbjct: 367 LRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQE- 425
Query: 120 FGNFSS 125
+ +
Sbjct: 426 WRGLEN 431
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 78.1 bits (193), Expect = 3e-16
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 7 INLFSNSLSGSLPSNIQ---NLKVLIGLDLSINRLYGDIPITISGLKD--LTTLFLAGNR 61
+ L + L SL + + L LS ++L T GLK LT L L+ N
Sbjct: 200 LFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259
Query: 62 SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
SF L LE+ L NN+ SL L N++ LN+ + + I
Sbjct: 260 LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLA 315
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 8e-16
Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 5/130 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQ----NLKVLIGLDLSINRLYGDIPITISGLKDLTTLF 56
L + ++L ++ S +N L L+L+ N++ S L L L
Sbjct: 352 LINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 411
Query: 57 LAGNRSQGSIPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
L N + + L ++ + LS N S + +L+ L + L+
Sbjct: 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471
Query: 116 TNVPFGNFSS 125
+ PF +
Sbjct: 472 SPSPFQPLRN 481
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 1e-15
Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKV--LIGLDLSINRLYGDIPITISGLKDLTTLFLA 58
I ++L ++ LS + + LK L LDLS N L + + L L FL
Sbjct: 221 NTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLE 280
Query: 59 GNRSQGSIPKSFESLASLEFLDLSSN---------NLSGKIPKSLEALSNLKELNVSYNR 109
N Q S L ++ +L+L + +L S + L L+ LN+ N
Sbjct: 281 YNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDND 340
Query: 110 LEGEIPTNVPFGNFSS 125
+ G F +
Sbjct: 341 IPGIKSNM--FTGLIN 354
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 5/121 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITIS----GLKDLTTLF 56
L+ + +N+ N + G + L L L LS + + L L
Sbjct: 328 LKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILN 387
Query: 57 LAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKS-LEALSNLKELNVSYNRLEGEIP 115
L N+ +F L LE LDL N + ++ L N+ E+ +SYN+
Sbjct: 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447
Query: 116 T 116
Sbjct: 448 N 448
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKD--LTTLFLAGNRSQG 64
++L N LS + L+ L L LS N++ + + L L L+ N+ +
Sbjct: 126 LDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 185
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSL---EALSNLKELNVSYNRLEGEIPT 116
P F ++ L L L++ L + + L A ++++ L++S ++L T
Sbjct: 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT 240
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 3e-11
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 1/114 (0%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+NL SN ++L L +DL +N L + L +L L N
Sbjct: 541 LNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVE 600
Query: 67 PKSFE-SLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
K F + +L LD+ N ++ + E + + L N P
Sbjct: 601 KKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHYLCNTP 654
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 86.6 bits (215), Expect = 9e-20
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 15/152 (9%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
E ++G + G V K + + VAIK + ER ++F + V H N++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 213 KIL--TTIAILI---------LKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRST 261
K+ + + L + +P ++ + + YLH +
Sbjct: 65 KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 262 PMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL 292
++H DLKP N LL V + DF + +
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 1e-19
Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 12/134 (8%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
E N + NLK L +++ +P + L ++ + +A N
Sbjct: 224 CEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACN 283
Query: 61 R--------SQGSIPKSFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLE 111
R ++ + + NNL + + SL+ + L L YN+LE
Sbjct: 284 RGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLE 343
Query: 112 GEIPTNVPFGNFSS 125
G++P FG+
Sbjct: 344 GKLPA---FGSEIK 354
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 6e-19
Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
QI SN+++ + + L L + + + ++ +
Sbjct: 186 TQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY-----AQQYK 239
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ +++L L +++ + K+P L+AL ++ +NV+ NR + +
Sbjct: 240 TEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALA 299
Query: 125 SQSFISN 131
Sbjct: 300 DAPVGEK 306
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 82.0 bits (203), Expect = 2e-17
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 13/127 (10%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQ--NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFL- 57
+ I+L N L+ L + + L L+G+DLS N P L +
Sbjct: 487 TYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSF-SKFPTQPLNSSTLKGFGIR 544
Query: 58 -----AGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
GNR+ P+ SL L + SN++ + + + N+ L++ N
Sbjct: 545 NQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK-VNEKI--TPNISVLDIKDNPNIS 601
Query: 113 EIPTNVP 119
+ V
Sbjct: 602 IDLSYVC 608
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 8e-17
Identities = 18/135 (13%), Positives = 52/135 (38%), Gaps = 18/135 (13%)
Query: 7 INLFSNSLSGSLPSN--IQNLKVLIGLDLSINRLYG-------DIPITISGLKDLTTLFL 57
++ N L +P+ +++ V+ +D S N + + T +++++ L
Sbjct: 382 LSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINL 440
Query: 58 AGNRSQGSIPKSFESLASLEFLDLSSNNLSG-------KIPKSLEALSNLKELNVSYNRL 110
+ N+ + F + + L ++L N L+ ++ + L +++ +N+L
Sbjct: 441 SNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKL 500
Query: 111 EGEIPTNVPFGNFSS 125
+ +
Sbjct: 501 TK-LSDDFRATTLPY 514
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 3e-16
Identities = 21/120 (17%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQGS 65
I+ ++ + + + + N L + ++ +K L L N+ +G
Sbjct: 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGK 345
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+P +F S L L+L+ N ++ ++ L+ ++N+L+ IP + S
Sbjct: 346 LP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSV 403
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 8e-16
Identities = 21/122 (17%), Positives = 46/122 (37%), Gaps = 11/122 (9%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPIT--ISGLKDLTTLFLAGNR-- 61
+NL N ++ + + + L + N+L IP + ++ + + N
Sbjct: 357 SLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKSVSVMSAIDFSYNEIG 415
Query: 62 -----SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
+ + + ++ ++LS+N +S + S L +N+ N L IP
Sbjct: 416 SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE-IPK 474
Query: 117 NV 118
N
Sbjct: 475 NS 476
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 4e-15
Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 15/121 (12%)
Query: 6 QINLFSNSLSG-------SLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFL 57
INL N L+ N +N +L +DL N+L + L L + L
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDL 520
Query: 58 AGNRSQGSIPKSFESLASLEFL------DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ N P + ++L+ D N + P+ + +L +L + N +
Sbjct: 521 SYNS-FSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR 579
Query: 112 G 112
Sbjct: 580 K 580
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 10/117 (8%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGL------DLSINRLYGDIPITISGLKDLTT 54
L Y++ I+L NS S P+ N L G D NR + P I+ LT
Sbjct: 512 LPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQ 570
Query: 55 LFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L + N + + + ++ LD+ N + + Y++ +
Sbjct: 571 LQIGSNDIR-KVNEKI--TPNISVLDIKDNPNISIDLSYVCPYIEAGMYMLFYDKTQ 624
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 4e-13
Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 7/116 (6%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNR 61
++L SG +P I L L L L + + P IS
Sbjct: 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMH 144
Query: 62 SQGSIPKS--FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
Q + E + L ++S+ I KS ++ N + +
Sbjct: 145 YQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VS 199
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 7e-11
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 32 DLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSG--- 88
+ ++ ++++ +T L L G + G +P + L LE L L S+
Sbjct: 63 NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNER 122
Query: 89 -KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQS 127
PK + A + ++ + P +FS
Sbjct: 123 LFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLI 162
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 9e-11
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 28 LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG----SIPKSFESLASLEFLDLSS 83
+ GL L G +P I L +L L L + + PK + S E
Sbjct: 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR 142
Query: 84 NNLSGKIPKSL--EALSNLKELNVSYNRLEGEIPT 116
+ E S+L + ++ + + I
Sbjct: 143 MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 3e-19
Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 30/162 (18%)
Query: 153 DEFNEWHLLGTESLGSVYK--WIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRH 208
+ N L G ++K W ++ +KV ++ R R F+ +C + H
Sbjct: 10 KQLNFLTKLNENHSGELWKGRW---QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 209 RNLIKILTTIAILILKPWYLSSCV----MPNG--------------DFPERLNIMIDMAL 250
N++ +L P + MP G D + + +DMA
Sbjct: 67 PNVLPVLGAC----QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 251 AFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+LH + L + ++DEDM A +S ++
Sbjct: 123 GMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 84.7 bits (210), Expect = 5e-19
Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 43/182 (23%)
Query: 143 TSYLDILQATDEFNEW----------HLLGTESLGSVYK--WIFLDETNVAIKVFNLQ-- 188
T+ Q + ++ +G S G+V++ W ++VA+K+ Q
Sbjct: 17 TTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDF 73
Query: 189 LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV----MPNG-------- 236
F + + K +RH N++ + + P + + G
Sbjct: 74 HAERVNEFLREVAIMKRLRHPNIVLF---MGAVTQPPNL---SIVTEYLSRGSLYRLLHK 127
Query: 237 -------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
D RL++ D+A YLH+ R+ P+VH +LK N L+D+ V DF +S
Sbjct: 128 SGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Query: 290 KL 291
+L
Sbjct: 187 RL 188
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 3e-18
Identities = 38/192 (19%), Positives = 64/192 (33%), Gaps = 26/192 (13%)
Query: 143 TSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEV 202
+ + D L+G G+VYK LDE VA+KVF+ + F + +
Sbjct: 3 AAASEPSLDLDNLKLLELIGRGRYGAVYKGS-LDERPVAVKVFSFANRQNFINE---KNI 58
Query: 203 HK--NVRHRNLIKIL---TTIAILILKPWYLSSCVMPNG-----------DFPERLNIMI 246
++ + H N+ + + + + L PNG D+ +
Sbjct: 59 YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH 118
Query: 247 DMALAFEYLH------HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETF 300
+ YLH + H DL N L+ D +SDF +S L
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP 178
Query: 301 TRKKPTIEMIIG 312
+ +G
Sbjct: 179 GEEDNAAISEVG 190
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 7e-18
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 153 DEFNEWHLLGTESLGSVYK--WIFLDETNVAIKVFNLQ-------LERAFRSFDSKCEVH 203
+E +G G V+K + D++ VAIK L + F+ F + +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 204 KNVRHRNLIKILTTIAILI---LKPWYLSSCVMPNG-------------DFPERLNIMID 247
N+ H N++K L P + +P G + +L +M+D
Sbjct: 78 SNLNHPNIVK-------LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD 130
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDE-----DMVAHVSDFNISKL 291
+AL EY+ + ++ P+VH DL+ N L + A V+DF +S+
Sbjct: 131 IALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 81.2 bits (201), Expect = 3e-17
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I+L N L + N L LDLS + GL L+ L L GN Q
Sbjct: 37 IDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFS 96
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
P SF L SLE L L+ + L LK+LNV++N + F N ++
Sbjct: 97 PGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHS-CKLPAYFSNLTN 154
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 3e-16
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ ++L + L L L L+ N + P + SGL L L
Sbjct: 55 FSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEG 112
+ L +L+ L+++ N + K+P L+NL +++SYN ++
Sbjct: 115 KLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 1/117 (0%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAG 59
LE +L +++ + L L L ++ N + + +LT L L+
Sbjct: 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSK 482
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
+ + F++L L+ L++S NNL L +L L+ S+NR+E
Sbjct: 483 CQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 539
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 25/104 (24%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ NS + SN+ N L LDLS +L L L L ++ N
Sbjct: 454 KMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLD 513
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
+ L SL LD S N + +L N++ N +
Sbjct: 514 SSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-15
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAG 59
+ ++L N + +N L+ L LD + L L+ L L ++
Sbjct: 375 TNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISY 433
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKS-LEALSNLKELNVSYNRLEGEIP 115
++ F L SL L ++ N+ + +NL L++S +LE
Sbjct: 434 TNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISW 490
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 2e-14
Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 10/127 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQGS 65
+ L N + P + L L L +L I L L L +A N
Sbjct: 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK 144
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK----ELNVSYNRLEGEIPTNVPFG 121
+P F +L +L +DLS N + L+ L L++S N + +
Sbjct: 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI-----DFIQDQ 199
Query: 122 NFSSQSF 128
F
Sbjct: 200 AFQGIKL 206
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 1e-13
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKV--LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
++L N+LS S + +L L LDLS N + GL++L L + +
Sbjct: 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKR 413
Query: 65 SIPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
S F SL L +LD+S N L++L L ++ N + +NV F N
Sbjct: 414 VTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV-FANT 472
Query: 124 SS 125
++
Sbjct: 473 TN 474
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 5e-10
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 16 GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLAS 75
GSL I+ + + +L +P I + L+ N + SF + +
Sbjct: 2 GSLNPCIEVVPNIT-YQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSE 57
Query: 76 LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
L++LDLS + K+ L +L L ++ N ++ P
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP 97
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 3e-09
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 7 INLFSNSLSG-SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLT----TLFLAGNR 61
+N+ N + LP+ NL L+ +DLS N + + L++ +L ++ N
Sbjct: 133 LNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192
Query: 62 SQGSIPKSFESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYNRLEGEIPTNVP 119
++F+ + L L L N S I K L+ L+ L + + E +
Sbjct: 193 IDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 8e-09
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L S+ L ++ K L + +L L L +L L N+ GS
Sbjct: 289 AMSLAGVSIK-YLEDVPKHFK-WQSLSIIRCQLKQ---FPTLDLPFLKSLTLTMNK--GS 341
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLE--ALSNLKELNVSYNRLE 111
I +L SL +LDLS N LS S ++L+ L++S+N
Sbjct: 342 ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 7/123 (5%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
I + L + L + + L+ + + +L + +
Sbjct: 262 TIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQL 319
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+ L L+ L L+ N S I AL +L L++S N L +
Sbjct: 320 KQF---PTLDLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLG 374
Query: 123 FSS 125
+S
Sbjct: 375 TNS 377
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 2e-08
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 10/116 (8%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQ 63
L +++ N + Q +K L L L N +I + L L L +
Sbjct: 184 LSLDMSLNPIDFIQDQAFQGIK-LHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFK 242
Query: 64 GSI------PKSFESLASL--EFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
P E L + + L+ N L+N+ ++++ ++
Sbjct: 243 DERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK 298
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 5e-06
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 7 INLFSNSLSGSLPSNIQNLK----VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
++L N + +++Q L+ V + LD+S+N + G+K L L L GN +
Sbjct: 158 VDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIK-LHELTLRGNFN 216
Query: 63 QGSIPK-SFESLASLEFLDLSSNNLSGKI------PKSLEALSNLKELNVSYNRLEGEIP 115
+I K ++LA L L + P +E L ++
Sbjct: 217 SSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSD 276
Query: 116 TNVPFGNFSS 125
V F ++
Sbjct: 277 DIVKFHCLAN 286
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 81.5 bits (201), Expect = 3e-17
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 6/121 (4%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
QI +N ++ + IQ L L + + + D D +
Sbjct: 428 TQIGNLTNRIT-FISKAIQRLTKLQIIYFANSPFTYDNIAV-----DWEDANSDYAKQYE 481
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ S+ +L L ++L + ++P L L L+ LN++ NR + +
Sbjct: 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541
Query: 125 S 125
Sbjct: 542 D 542
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 9e-17
Identities = 28/135 (20%), Positives = 49/135 (36%), Gaps = 14/135 (10%)
Query: 7 INLFSNSLSGSLPSNIQ--NLKVLIGLDLSINRLYGDIPITISGLKDLTTL------FLA 58
I+L N L+ SL + + L L +D+S N P L
Sbjct: 733 IDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF-SSFPTQPLNSSQLKAFGIRHQRDAE 790
Query: 59 GNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL-EGEIPTN 117
GNR P + SL L + SN++ K+ + L L L+++ N ++ +
Sbjct: 791 GNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEKL--TPQLYILDIADNPNISIDVTSV 847
Query: 118 VPFGNFSSQSFISNY 132
P+ + +
Sbjct: 848 CPYIEAGMYVLLYDK 862
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 73.0 bits (179), Expect = 2e-14
Identities = 18/121 (14%), Positives = 44/121 (36%), Gaps = 11/121 (9%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP--ITISGLKDLTTLFLAGNRSQ 63
+ + N +N +L +DL N+L + + L L+ + ++ N
Sbjct: 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRATTLPYLSNMDVSYNCFS 766
Query: 64 GSIPKSFESLASLEFLDL------SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
S P + + L+ + N + + P + +L +L + N + ++
Sbjct: 767 -SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIR-KVDEK 824
Query: 118 V 118
+
Sbjct: 825 L 825
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.9 bits (171), Expect = 2e-13
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 15/130 (11%)
Query: 7 INLFSNSLSG---------SLPSNIQNLKVLIGLDLSINRLYG-DIPITISGLKDLTTLF 56
+N+ N L + + + N L ++ + L L
Sbjct: 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLD 579
Query: 57 LAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIP 115
N + ++F + L L L N + IP+ ++ L S+N+L+ IP
Sbjct: 580 CVHN--KVRHLEAFGTNVKLTDLKLDYNQIEE-IPEDFCAFTDQVEGLGFSHNKLK-YIP 635
Query: 116 TNVPFGNFSS 125
+
Sbjct: 636 NIFNAKSVYV 645
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 3e-13
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 16/132 (12%)
Query: 1 LEYILQINLFSNSLSG-----SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTL 55
+ + ++ N + S + + LS N + + ++T+
Sbjct: 643 VYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTI 702
Query: 56 FLAGNR-------SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEA--LSNLKELNVS 106
L+ N S ++++ L +DL N L+ + A L L ++VS
Sbjct: 703 ILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVS 761
Query: 107 YNRLEGEIPTNV 118
YN PT
Sbjct: 762 YNCFS-SFPTQP 772
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 68.7 bits (168), Expect = 4e-13
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIP--ITISGLKDLTTLFLAGNRS 62
+ L N + +P + + GL S N+L IP + + ++ + N+
Sbjct: 599 DLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKY-IPNIFNAKSVYVMGSVDFSYNKI 656
Query: 63 QGSIPKSFESL-----ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
S+ + + LS N + + S + + +S N + IP N
Sbjct: 657 GSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPEN 715
Query: 118 V 118
Sbjct: 716 S 716
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 2e-10
Identities = 18/140 (12%), Positives = 36/140 (25%), Gaps = 29/140 (20%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L G +P I L L L + + +R +
Sbjct: 327 GLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMH 386
Query: 66 IPKSF-ESLASLEFLDLSSN----------------------------NLSGKIPKSLEA 96
K F + L DL + N I K+++
Sbjct: 387 YKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQR 446
Query: 97 LSNLKELNVSYNRLEGEIPT 116
L+ L+ + + + +
Sbjct: 447 LTKLQIIYFANSPFTYDNIA 466
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 5e-09
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 10/117 (8%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDL------SINRLYGDIPITISGLKDLTT 54
L Y+ +++ N S S P+ N L + NR+ P I+ L
Sbjct: 752 LPYLSNMDVSYNCFS-SFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQ 810
Query: 55 LFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L + N + + + L LD++ N S+ + Y++ +
Sbjct: 811 LQIGSNDIR-KVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 56.0 bits (135), Expect = 6e-09
Identities = 11/87 (12%), Positives = 29/87 (33%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ ++ + + +T L LAG ++G +P + L L+ L +++ +
Sbjct: 304 FNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSG 363
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTN 117
+ +R+
Sbjct: 364 RLFGDEELTPDMSEERKHRIRMHYKKM 390
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 5e-08
Identities = 15/131 (11%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
+ ++ + L L+ G++P ++ L+ LK L+ +
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 120 FGNFSSQSFISNYALCAHQDSKRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETN 179
S + + H Y L +D + + + + K + +
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD-LLQDAINRNPEMKPIKKDSRISLKD 427
Query: 180 VAIKVFNLQLE 190
I ++
Sbjct: 428 TQIGNLTNRIT 438
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 4e-17
Identities = 21/119 (17%), Positives = 36/119 (30%), Gaps = 5/119 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ N L + L L LDL+ ++Y T L TL L N
Sbjct: 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMA 97
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ +L+ L +S L L+ L + N + +++
Sbjct: 98 ETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI-----SSIKLPKGFP 151
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 8e-17
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 2/124 (1%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+ INL + + L LDL+ L ++P + GL L L L+ N+
Sbjct: 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLKKLVLSANKF 313
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKI-PKSLEALSNLKELNVSYNRLEGEIPTNVPFG 121
+ S + SL L + N ++ LE L NL+EL++S++ +E N+
Sbjct: 314 ENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373
Query: 122 NFSS 125
N S
Sbjct: 374 NLSH 377
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.7 bits (192), Expect = 4e-16
Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 2/130 (1%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + ++L + Q+ L L L+ N L +SG K L LF
Sbjct: 56 LINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT 115
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ +LE L L SN++S LK L+ N + +
Sbjct: 116 GISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED--M 173
Query: 121 GNFSSQSFIS 130
+ + +S
Sbjct: 174 SSLQQATNLS 183
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 7e-16
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 4/123 (3%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLAGNR--S 62
++ L +N + N L L + N ++ + L++L L L+ + +
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+L+ L+ L+LS N ++ + L+ L++++ RL+ PF N
Sbjct: 365 SDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKV-KDAQSPFQN 423
Query: 123 FSS 125
Sbjct: 424 LHL 426
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 2e-15
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 7 INLFSNSLSGSLP-SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L L S QNL +L L+LS + L GL L L L GN
Sbjct: 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464
Query: 66 I---PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
S ++L LE L LS +LS + +L + +++S+NRL
Sbjct: 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 75.1 bits (185), Expect = 4e-15
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 2/128 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L +N L + + K L L + I + K L +L+L N
Sbjct: 86 LVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIK 145
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK--ELNVSYNRLEGEIPTNVPFGNFS 124
L+ LD +N + + + +L LN++ N + G P F
Sbjct: 146 LPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQ 205
Query: 125 SQSFISNY 132
S +F
Sbjct: 206 SLNFGGTQ 213
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 1e-14
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG-DIPITISGLKDLTTLFLAG 59
L ++ +NL N + L LDL+ RL D L L L L+
Sbjct: 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKI---PKSLEALSNLKELNVSYNRLEGEIPT 116
+ S + F+ L +L+ L+L N+ SL+ L L+ L +S+ L I
Sbjct: 435 SLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS-SIDQ 493
Query: 117 NVPFGNFSS 125
+ F +
Sbjct: 494 HA-FTSLKM 501
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-14
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 3/125 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ +S ++ + + V ++L + + T L L L
Sbjct: 230 LWLGTFEDMDDEDISPAVFEGLCEMSVES-INLQKHYFFNISSNTFHCFSGLQELDLTAT 288
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+P L++L+ L LS+N S +L L++ N E+ T
Sbjct: 289 HLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGC-L 346
Query: 121 GNFSS 125
N +
Sbjct: 347 ENLEN 351
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 5e-14
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 6/132 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI---TISGLKDLTTLFL 57
L + +NL + L S L L L+L N ++ L L L L
Sbjct: 424 LHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483
Query: 58 AGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
+ +F SL + +DLS N L+ ++L L + LN++ N + +P+
Sbjct: 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSL 542
Query: 118 VPFGNFSSQSFI 129
S Q I
Sbjct: 543 --LPILSQQRTI 552
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 5e-13
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 8 NLFSNSLSG---SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
NL N +++Q L L L LS L + LK + + L+ NR
Sbjct: 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
S ++ L + +L+L+SN++S +P L LS + +N+ N L+
Sbjct: 515 SSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 66.2 bits (162), Expect = 3e-12
Identities = 20/119 (16%), Positives = 31/119 (26%), Gaps = 1/119 (0%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+S + N K L L L N + + L L N
Sbjct: 111 FFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170
Query: 68 KSFESLASLEFLDLS-SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ SL L L+ + N I + + LN + I + S
Sbjct: 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQS 229
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 5e-10
Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 5/95 (5%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ L +IP T+ L + N +F L +L FLDL+ +
Sbjct: 17 YNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ ++ L L ++ N L T +
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAET--ALSGPKA 106
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 9/131 (6%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVL--IGLDLSINRLYGDIPITISGLKDLTTLFLA 58
E + ++ +N++ ++ +L+ + L+L+ N + I +L
Sbjct: 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI-AGIEPGAFDSAVFQSLNFG 210
Query: 59 GNRSQGSIPK--SFESLASLEFLDLSSNNLSGKIPKSLEALS--NLKELNVSYNRLEGEI 114
G ++ I K ++ SL + P E L +++ +N+ +
Sbjct: 211 GTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270
Query: 115 PTNVPFGNFSS 125
F FS
Sbjct: 271 SN--TFHCFSG 279
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 5e-08
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 3/113 (2%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ-GS 65
+ L SN +S + L LD N ++ +S L+ T L L N +
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLE--ALSNLKELNVSYNRLEGEIPT 116
I A + L+ I K L+ + +L E P
Sbjct: 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPA 246
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 78.7 bits (195), Expect = 5e-17
Identities = 43/187 (22%), Positives = 72/187 (38%), Gaps = 53/187 (28%)
Query: 144 SYLDILQATDEFNEWHLLGTESL------GSVYKWIFLDETNVAIKVFN-------LQLE 190
S+ ++ T+ F+E + + G VYK +++ T VA+K +L+
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELK 74
Query: 191 RAFRSFDSKCEVH--KNVRHRNLIKIL---TTIAILILKPWYLSSCV---MPNG------ 236
+ F E+ +H NL+++L + L L V MPNG
Sbjct: 75 QQFDQ-----EIKVMAKCQHENLVELLGFSSDGDDLCL--------VYVYMPNGSLLDRL 121
Query: 237 ---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287
+ R I A +LH +H D+K +N LLDE A +SDF
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFG 178
Query: 288 ISKLLGV 294
+++
Sbjct: 179 LARASEK 185
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 77.8 bits (192), Expect = 1e-16
Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 28/156 (17%)
Query: 159 HLLGTESLGSVYK--WIFLDETNVAIKVFNLQLERAFRSFDSKCEVHK--NVRHRNLIKI 214
+G G V++ W NVA+K+F+ + E+ S+ + E++ +RH N++
Sbjct: 14 ECVGKGRYGEVWRGSW---QGENVAVKIFSSRDEK---SWFRETELYNTVMLRHENILGF 67
Query: 215 LT--TIAILILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLH----- 256
+ + +L + G D L I++ +A +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 257 HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ H DLK N L+ ++ ++D ++ +
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 2e-16
Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
Query: 159 HLLGTESLGSVYK--WIFLDETNVAIKVFNLQ----LERAFRSFDSKCEVHKNVRHRNLI 212
++G G VY+ W VA+K + + + + ++ ++H N+I
Sbjct: 13 EIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 213 KILTTIAILILKPWYLSSCV----MPNG-----------DFPERLNIMIDMALAFEYLHH 257
+ + + +P C+ G +N + +A YLH
Sbjct: 70 AL---RGVCLKEPNL---CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAH--------VSDFNISKL 291
P++H DLK SN L+ + + ++DF +++
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 3e-16
Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 24/154 (15%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHK--NVRHRNLIKILT 216
+G G V++ + E VA+K+F+ + ER S+ + E+++ +RH N++ +
Sbjct: 48 ESIGKGRFGEVWRGKWRGEE-VAVKIFSSREER---SWFREAEIYQTVMLRHENILGFIA 103
Query: 217 --TIAILILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLH-----HG 258
+L S +G + + + A +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ H DLK N L+ ++ ++D ++
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 76.3 bits (188), Expect = 6e-16
Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 28/148 (18%)
Query: 167 GSVYK--WIFLDETNVAIKVFNLQLERAFRSFDSKCEVHK--NVRHRNLIKILT--TIAI 220
G V+ W VA+KVF S+ + E+++ +RH N++ +
Sbjct: 51 GEVWMGKW---RGEKVAVKVFF---TTEEASWFRETEIYQTVLMRHENILGFIAADIKGT 104
Query: 221 LILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLH-----HGRSTPMV 264
YL + NG D L + +LH +
Sbjct: 105 GSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 265 HCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H DLK N L+ ++ ++D ++
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKF 192
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 5e-15
Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 29/151 (19%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKIL- 215
+G+ S G+VYK + + VA+K+ N+ + ++F ++ V + RH N++ +
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 216 --TTIAILILKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRS 260
T + I+ W + + ++I A +YLH +
Sbjct: 88 YSTAPQLAIVTQW------CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---A 138
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
++H DLK +N L ED + DF ++
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 1e-14
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ + + L LP +Q L L L+ N L +P +I+ L L L + +
Sbjct: 109 MTIDAAGLM-ELPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPELTEL 166
Query: 67 PKSF---------ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
P+ + L +L+ L L + +P S+ L NLK L + + L
Sbjct: 167 PEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-14
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+ ++ LS +L I +L L LDL + P G L L L + ++P
Sbjct: 212 KIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLP 270
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN---RLEGEIPTNVP 119
L LE LDL ++P + L + V + +L+ P P
Sbjct: 271 LDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPVARP 325
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-14
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
L S L P L L + + L ++P T+ L TL LA N + ++P
Sbjct: 87 ELRSVPLP-QFPDQAFRLSHLQHMTIDAAGL-MELPDTMQQFAGLETLTLARNPLR-ALP 143
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSL---------EALSNLKELNVSYNRLEGEIPTNV 118
S SL L L + + ++P+ L + L NL+ L + + + +P ++
Sbjct: 144 ASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASI 202
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 3e-10
Identities = 13/130 (10%), Positives = 36/130 (27%), Gaps = 24/130 (18%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP---------------------IT 45
+ ++ + + D + +
Sbjct: 17 LYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLE 76
Query: 46 ISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNV 105
+ L L P L+ L+ + + + L ++P +++ + L+ L +
Sbjct: 77 DATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTL 134
Query: 106 SYNRLEGEIP 115
+ N L +P
Sbjct: 135 ARNPLR-ALP 143
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 1e-14
Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 31/152 (20%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILT 216
L+G G VY + E VAI++ +++ E ++F + ++ RH N++
Sbjct: 39 ELIGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF-- 94
Query: 217 TIAILILKPWYLSSCV----MPNG-------------DFPERLNIMIDMALAFEYLHHGR 259
+ + P + D + I ++ YLH
Sbjct: 95 -MGACMSPPHL---AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH--- 147
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
+ ++H DLK N D V ++DF + +
Sbjct: 148 AKGILHKDLKSKNVFYDNGKV-VITDFGLFSI 178
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 5e-14
Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 1/118 (0%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+L N L + + L LDLS + L L+TL L GN Q
Sbjct: 34 DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLAL 93
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+F L+SL+ L NL+ + L LKELNV++N ++ F N ++
Sbjct: 94 GAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLTN 150
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 70.1 bits (172), Expect = 1e-13
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ ++L + Q+L L L L+ N + SGL L L
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLE 111
L +L+ L+++ N + S K+P+ L+NL+ L++S N+++
Sbjct: 111 NLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 2e-13
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ ++L ++ +L+ LI LD+S +GL L L +AGN Q +
Sbjct: 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 460
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
F L +L FLDLS L P + +LS+L+ LN++ N+L+ +P + F +
Sbjct: 461 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK-SVPDGI-FDRLT 518
Query: 125 SQSFI 129
S I
Sbjct: 519 SLQKI 523
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 67.4 bits (165), Expect = 1e-12
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 7 INLFSNSLS--GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
++L N LS G + L LDLS N + + GL+ L L + +
Sbjct: 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQ 410
Query: 65 SIPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
S F SL +L +LD+S + LS+L+ L ++ N + ++ F
Sbjct: 411 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI-FTEL 469
Query: 124 SS 125
+
Sbjct: 470 RN 471
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 4e-12
Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 10/127 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQGS 65
+ L N + L L L L I LK L L +A N
Sbjct: 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK 140
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK----ELNVSYNRLEGEIPTNVPFG 121
+P+ F +L +LE LDLSSN + L L + L++S N + + G
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM-----NFIQPG 195
Query: 122 NFSSQSF 128
F
Sbjct: 196 AFKEIRL 202
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 63.2 bits (154), Expect = 3e-11
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ +P N+ + K L DLS N L + +L L L+ Q
Sbjct: 13 QCMELNFY-KIPDNLPFSTKNL---DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE 68
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+++SL+ L L L+ N + + LS+L++L L
Sbjct: 69 DGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLEN 117
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 5e-11
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLAG 59
L ++ +++ + L L L ++ N + P + L++LT L L+
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
+ + P +F SL+SL+ L+++SN L + L++L+++ + N
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 3e-07
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 1 LEYILQINLFSNSLSGSLP-SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
L + +L S ++ S + L ++ + LK L L
Sbjct: 281 LTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQF------PTLKLKSLKRLTFTS 334
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLS--GKIPKSLEALSNLKELNVSYNRL 110
N+ + S L SLEFLDLS N LS G +S ++LK L++S+N +
Sbjct: 335 NKGGNAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 385
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ NS + +I L+ L LDLS +L P + L L L +A N+ +
Sbjct: 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Query: 67 PKSFESLASLEFLDLSSNNLS 87
F+ L SL+ + L +N
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWD 531
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 9e-14
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 23/150 (15%)
Query: 159 HLLGTESLGSVYK--WIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
+LG G K E + +K E R+F + +V + + H N++K
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEV-MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF-- 72
Query: 217 TIAILIL-KPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTP 262
I +L K + + G + +R++ D+A YLH S
Sbjct: 73 -IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMN 128
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H DL N L+ E+ V+DF +++L+
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLM 158
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-13
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ + + + + I L L L + + D +SGL LT L ++ + S
Sbjct: 70 DLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDS 127
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
I +L + +DLS N I L+ L LK LN+ ++ +
Sbjct: 128 ILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGV 171
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 5e-13
Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ + I L + +++ L + I+ + L ++ + ISGL +L L + G
Sbjct: 43 MNSLTYITLANINVT-DL-TGIEYAHNIKDLTINNIHA-TNYN-PISGLSNLERLRIMGK 98
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ L SL LD+S + I + L + +++SYN
Sbjct: 99 DVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYN 146
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 1e-12
Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ + ++ N+ L L LD+S + I I+ L + ++ L+ N + I
Sbjct: 93 LRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDI 152
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113
++L L+ L++ + + +E L +L + G+
Sbjct: 153 -MPLKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 7e-10
Identities = 19/117 (16%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ L L +S + + + +L + ++++ L G I ++ L +
Sbjct: 22 FKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTG-----IEYAHNIKDLTINNI 76
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
+ L++LE L + +++ +L L++L L++S++ + I T
Sbjct: 77 --HATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTK 131
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 2e-13
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 12/125 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ +SL +L S Q+ + LDLS N L ++ L L L+ N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
ESL++L LDL++N + L +++ L+ + N + + V
Sbjct: 69 V-LYETL-DLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-----SRVSC 116
Query: 121 GNFSS 125
Sbjct: 117 SRGQG 121
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-12
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 LEYILQINLFSNSLSG-SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
+ ++L N + + + L L+L N +Y D+ + L TL L+
Sbjct: 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSS 200
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
N+ + F+S A + ++ L +N L I K+L NL+ ++ N
Sbjct: 201 NKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFH 250
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-10
Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
NL SN L ++++L L LDL+ N + + + TL A N +
Sbjct: 64 NLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-RVS 115
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ + L++N ++ S ++ L++ N ++ + + +
Sbjct: 116 --CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDT 170
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 2e-08
Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 5/127 (3%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+NL N + + + L LDLS N+L + +T + L N+
Sbjct: 173 HLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKL-AFMGPEFQSAAGVTWISLRNNKLV-L 228
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
I K+ +LE DL N + N + V+ ++ N +
Sbjct: 229 IEKALRFSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTVAKQTVKKLTGQNEEECTVPT 287
Query: 126 QSFISNY 132
Y
Sbjct: 288 LGHYGAY 294
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 69.8 bits (171), Expect = 2e-13
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI- 66
+L+ +P + + L LS N + + L+ L L L + +I
Sbjct: 10 FYRFCNLT-QVPQVLNTTERL---LLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTID 65
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
++F +L +L LDL S+ + P + + L +L EL + + L + + F N +
Sbjct: 66 KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 69.1 bits (169), Expect = 3e-13
Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLAG 59
L ++ L N + S+ L+ L L+L I L +L L L
Sbjct: 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKI--PKSLEALSNLKELNVSYNRLEGEIPTN 117
++ P +F+ L L L L LS + L L L++S N++ + +
Sbjct: 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIR-SLYLH 141
Query: 118 VPFGNFSS 125
FG +S
Sbjct: 142 PSFGKLNS 149
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 1e-12
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+ ++L + + LK L L+L+ N++ GL +L L L+ N
Sbjct: 267 SVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+F L + ++DL N+++ ++ + L L+ L++ N L
Sbjct: 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-11
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKD--LTTLFLAGNRS 62
FSN++S S ++ ++G + + T +GL + L L+
Sbjct: 219 DITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFV 278
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+ FE+L L+ L+L+ N ++ ++ L NL+ LN+SYN L + N
Sbjct: 279 FSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL-----GELYSSN 333
Query: 123 FSS 125
F
Sbjct: 334 FYG 336
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 64.1 bits (156), Expect = 2e-11
Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 12/128 (9%)
Query: 6 QINLFSNSLSG-SLPSNIQNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQ 63
I+L N L + + + L L L+ NR T S L LFL N Q
Sbjct: 405 LIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQ 464
Query: 64 GSI-----PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+ FE L+ L+ L L+ N L+ P L+ L+ L+++ NRL T +
Sbjct: 465 LAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRL-----TVL 519
Query: 119 PFGNFSSQ 126
+ +
Sbjct: 520 SHNDLPAN 527
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 5e-11
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ + +NL N ++ L L L+LS N L GL + + L N
Sbjct: 289 LKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKN 348
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
++F+ L L+ LDL N L+ ++ + ++ ++ +S N+L +P
Sbjct: 349 HIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKL-----VTLPK 398
Query: 121 GNFSSQS 127
N ++
Sbjct: 399 INLTANL 405
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 5e-10
Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI--PITISGLKDLTTLFLAGNR-SQ 63
++L S+ + P Q L L L L L + LK LT L L+ N+
Sbjct: 78 LDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRS 137
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALS--NLKELNVSYNRLEGEIPTN 117
+ SF L SL+ +D SSN + LE L L +++ N L + +
Sbjct: 138 LYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVD 193
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 2e-06
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I+L N ++ + L+ L LDL N L TI + + +FL+GN+
Sbjct: 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLSGNKLVTLP 397
Query: 67 PKSFESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ + + LS N L I L + +L+ L ++ NR + S
Sbjct: 398 KINL----TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS-SCSGDQTPSENPS 452
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-----QNLKVLIGLDLSINRLYGDIPITISGLKDLTTL 55
+ Q+ L N L + + + + L L L L+ N L P S L L L
Sbjct: 450 NPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGL 509
Query: 56 FLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
L NR A+LE LD+S N L P + +L L++++N+
Sbjct: 510 SLNSNRLTVLSHNDL--PANLEILDISRNQLLAPNP---DVFVSLSVLDITHNKF 559
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 2e-13
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L N+L+ + + N L+ +DLS N L + ++ L L+++ NR ++
Sbjct: 231 LKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-AL 287
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ + +L+ LDLS N+L + ++ L+ L + +N + + +
Sbjct: 288 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI-----VTLKLSTHHT 340
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 5e-12
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+++L N L + + ++ L L +S NRL + + + L L L+ N
Sbjct: 252 EVDLSYNELE-KIMYHPFVKMQRLERLYISNNRL-VALNLYGQPIPTLKVLDLSHNHLL- 308
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ ++ LE L L N++ + L LK L +S+N + F N +
Sbjct: 309 HVERNQPQFDRLENLYLDHNSIV-TLK--LSTHHTLKNLTLSHNDWD-CNSLRALFRNVA 364
Query: 125 SQSFISNYALCA 136
+ C
Sbjct: 365 RPAVDDADQHCK 376
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 9e-12
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+NL + + + + L + N + P + LT L L N
Sbjct: 73 LLNLNDLQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS 131
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
F + L L +S+NNL + +A ++L+ L +S NRL T+V
Sbjct: 132 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-----THVDLSLIP 186
Query: 125 S 125
S
Sbjct: 187 S 187
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
++ + N++ LP ++ QN+ +L L L N L +P I LTTL ++ N +
Sbjct: 97 KLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLE 154
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+F++ SL+ L LSSN L+ + L + +L NVSYN L
Sbjct: 155 RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLLS 199
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 8e-10
Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ ++++ LP+ + + + + L+L+ ++ + + L++ N +
Sbjct: 50 VTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYL 108
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
P F+++ L L L N+LS L L++S N LE
Sbjct: 109 PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 154
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 9e-10
Identities = 12/116 (10%), Positives = 35/116 (30%), Gaps = 1/116 (0%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+++ + L + + + + + + L L +
Sbjct: 22 VFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 81
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+ +F +++ L + N + P + + L L + N L +P +
Sbjct: 82 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI 136
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 9e-09
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+LF ++S +L S + + LD S N + + +LT L L N
Sbjct: 187 SLFHANVSYNLLSTLAIPIAVEELDASHNSI---NVVRGPVNVELTILKLQHNNLT-DTA 242
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ L +DLS N L + + L+ L +S NRL
Sbjct: 243 -WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 5e-13
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ + +N +S + +++L L L++ N++ DI + ++ L L +LFL N+
Sbjct: 247 WLEIGTNQISD--INAVKDLTKLKMLNVGSNQI-SDISV-LNNLSQLNSLFLNNNQLGNE 302
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ L +L L LS N+++ P L +LS + + + ++
Sbjct: 303 DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 66.0 bits (162), Expect = 2e-12
Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ L +++S S + NL + L+L N D+ +S + L L + ++ +
Sbjct: 114 ELYLNEDNISD--ISPLANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDV 170
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
P +L L L L+ N + P L +L++L N++ P
Sbjct: 171 TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP 216
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 3e-12
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ + +N ++ S + NL L L++ N++ DI + L L L + N Q S
Sbjct: 225 SLKIGNNKITDL--SPLANLSQLTWLEIGTNQI-SDIN-AVKDLTKLKMLNVGSN--QIS 278
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+L+ L L L++N L + + + L+NL L +S N + P
Sbjct: 279 DISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 62.9 bits (154), Expect = 2e-11
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
NL +N S S + N+ L L ++ +++ PI + L DL +L L N+ + P
Sbjct: 138 NLGANHNL-SDLSPLSNMTGLNYLTVTESKVKDVTPI--ANLTDLYSLSLNYNQIEDISP 194
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
SL SL + N ++ P + ++ L L + N++ P
Sbjct: 195 --LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP 238
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 62.6 bits (153), Expect = 2e-11
Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+NL N ++ S + NL L L + N++ + L +L L+L +
Sbjct: 70 YLNLNGNQITD--ISPLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDI 125
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
P +L + L+L +N+ L ++ L L V+ ++++ P
Sbjct: 126 SP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVKDVTP 172
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 5e-11
Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ L S++ + L+ + L ++ ++ I I L +L L L GN
Sbjct: 21 LAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKV-ASIQ-GIEYLTNLEYLNLNGN 76
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+ P +L L L + +N ++ +L+ L+NL+EL ++ + + P
Sbjct: 77 QITDISP--LSNLVKLTNLYIGTNKIT--DISALQNLTNLRELYLNEDNISDISP 127
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 55.6 bits (135), Expect = 6e-09
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
+L I L + +T L+ +T L +AG + SI E L +LE+L
Sbjct: 16 FPDADLAEGIRAVLQKASVTD--VVTQEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYL 71
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+L+ N ++ P L L L L + N++
Sbjct: 72 NLNGNQITDISP--LSNLVKLTNLYIGTNKIT 101
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 6e-13
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L N+L+ + + N L+ +DLS N L + ++ L L+++ NR ++
Sbjct: 237 LKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-AL 293
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ + +L+ LDLS N+L + ++ L+ L + +N + + +
Sbjct: 294 NLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSI-----VTLKLSTHHT 346
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 59.2 bits (143), Expect = 5e-10
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
++ + N++ LP ++ QN+ +L L L N L +P I LTTL ++ N +
Sbjct: 103 KLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDL-SSLPRGIFHNTPKLTTLSMSNNNLE 160
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+F++ SL+ L LSSN L+ + L + +L NVSYN L
Sbjct: 161 RIEDDTFQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLLS 205
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 57.2 bits (138), Expect = 2e-09
Identities = 13/114 (11%), Positives = 37/114 (32%), Gaps = 3/114 (2%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+ I++ + + L + + + + + + L L + +
Sbjct: 32 VHIDMQTQDVYFGFED--ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE 89
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+F +++ L + N + P + + L L + N L +P +
Sbjct: 90 IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGI 142
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 1e-08
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 5/104 (4%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+LF ++S +L S + + LD S N + + +LT L L N
Sbjct: 193 SLFHANVSYNLLSTLAIPIAVEELDASHNSI---NVVRGPVNVELTILKLQHNNLT-DTA 248
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ L +DLS N L + + L+ L +S NRL
Sbjct: 249 -WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 291
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-12
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+ +SL +L S Q+ + LDLS N L ++ L L L+ N ++
Sbjct: 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD 75
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
ESL++L LDL++N + L +++ L+ + N + + V
Sbjct: 76 --LESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-----SRVSCSRGQG 121
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 6e-12
Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 1 LEYILQINLFSNSLSG-SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
+ ++L N + + + L L+L N +Y D+ + L TL L+
Sbjct: 143 RSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQVV-FAKLKTLDLSS 200
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
N+ + F+S A + ++ L +N L I K+L NL+ ++ N +
Sbjct: 201 NKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258
Query: 120 FGNFSSQSFISN 131
N Q+
Sbjct: 259 SKNQRVQTVAKQ 270
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 58.7 bits (142), Expect = 8e-10
Identities = 20/120 (16%), Positives = 45/120 (37%), Gaps = 11/120 (9%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+NL SN L ++++L L LDL+ N + + + TL A N
Sbjct: 62 LLNLSSNVLYE--TLDLESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS-R 113
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ + + L++N ++ S ++ L++ N ++ + + +
Sbjct: 114 VS--CSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID-TVNFAELAASSDT 170
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 57.9 bits (140), Expect = 1e-09
Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
+ +++L N LS +++ L L+LS N LY + + L L TL L N
Sbjct: 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--TLDLESLSTLRTLDLNNN 90
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ S+E L ++NN+S ++ K + ++ N++ +
Sbjct: 91 Y-----VQELLVGPSIETLHAANNNIS-RVS--CSRGQGKKNIYLANNKIT-MLRDLD-E 140
Query: 121 GNFSS 125
G S
Sbjct: 141 GCRSR 145
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 1e-08
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
Query: 49 LKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ + + ++ +S +++ LDLS N LS L + L+ LN+S N
Sbjct: 9 GNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSN 68
Query: 109 RLEGEIPTNVPFGNFSS 125
L E + S+
Sbjct: 69 VLY-ETL---DLESLST 81
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 14/112 (12%), Positives = 25/112 (22%), Gaps = 4/112 (3%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS-- 65
+ ++ N + V L L A QGS
Sbjct: 266 TVAKQTVKKLTGQNEEECTVPTLGHYGAYCCEDLPAPFADRLIALKRKEHALLSGQGSET 325
Query: 66 --IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+ E+ A +D I + L L+ ++
Sbjct: 326 ERLECERENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVS 377
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 2e-12
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQG 64
++L N L SLP Q L L LD+S NRL +P+ GL +L L+L GN +
Sbjct: 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRL-TSLPLGALRGLGELQELYLKGNELK- 137
Query: 65 SIPKS-FESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNVPFGN 122
++P LE L L++NNL+ ++P L L NL L + N L +P G
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL-----YTIPKGF 191
Query: 123 FSSQS 127
F S
Sbjct: 192 FGSHL 196
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 9e-11
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+L N L + + L L+L L + L L TL L+ N+ Q S+P
Sbjct: 37 HLSENLLYTFSLATLMPYTRLTQLNLDRAEL-TKLQ-VDGTLPVLGTLDLSHNQLQ-SLP 93
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
++L +L LD+S N L+ +L L L+EL + N L+ +P +
Sbjct: 94 LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGL 143
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 11/83 (13%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
++ L +P + KD T L L+ N + L L+L L+
Sbjct: 15 VNCDKRNL-TALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT--- 68
Query: 91 PKSLEA---LSNLKELNVSYNRL 110
L+ L L L++S+N+L
Sbjct: 69 --KLQVDGTLPVLGTLDLSHNQL 89
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 3e-12
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG-DIPITISGLKDLTTLFLAGNRSQGS 65
++L N LS S L L L+L N + L +L TL + +
Sbjct: 79 LDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSE 138
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
I + F L SL L++ + +L +SL+++ ++ L + +
Sbjct: 139 IRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 9e-12
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ S S + S+PS + +K L DLS N++ + +L L L +R
Sbjct: 11 DGRSRSFT-SIPSGLTAAMKSL---DLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+F SL SLE LDLS N+LS LS+LK LN+ N + + F N ++
Sbjct: 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQ-TLGVTSLFPNLTN 124
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 4e-11
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 13/131 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRL---YGDIPITISGLKDLTTLF 56
LE + +I + ++ + +P + Q+LK L LDLS N + Y L TL
Sbjct: 309 LEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLV 367
Query: 57 LAGNR--SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEI 114
L+ N S + +L +L LD+S N +P S + ++ LN+S +
Sbjct: 368 LSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGI---- 422
Query: 115 PTNVPFGNFSS 125
V +
Sbjct: 423 -RVVKTCIPQT 432
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 5e-10
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 2/159 (1%)
Query: 6 QINLFSNSLSG-SLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQ 63
+NL N + S NL L L + + +I I +GL L L + +
Sbjct: 102 YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+S +S+ + L L + + + + LS+++ L + L + +P
Sbjct: 162 NYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEV 221
Query: 124 SSQSFISNYALCAHQDSKRTSYLDILQATDEFNEWHLLG 162
SS + D L +L+ E +E
Sbjct: 222 SSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDD 260
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-09
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
I ++++ L L + L+ + + + ++++ LK L L L+ N
Sbjct: 287 TIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346
Query: 63 QGSIPKS---FESLASLEFLDLSSNNLS--GKIPKSLEALSNLKELNVSYNRLE 111
K+ + SL+ L LS N+L K + L L NL L++S N
Sbjct: 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH 400
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 9e-09
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N ++ +++ L L L +R+ L L L L+ N
Sbjct: 31 LDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90
Query: 67 PKSFESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
F L+SL++L+L N + L+NL+ L + EI F +S
Sbjct: 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRID-FAGLTS 149
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 1e-08
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 7 INLFSNSLSGSLPSN---IQNLKVLIGLDLSINRLY--GDIPITISGLKDLTTLFLAGNR 61
++L N + N L L LS N L + LK+LT+L ++ N
Sbjct: 339 LDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT 398
Query: 62 SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
+P S + + FL+LSS + + + L+ L+VS N L+ +P
Sbjct: 399 FH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLD-SFSLFLP 451
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 7e-07
Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+++ N+ +P + Q + + L+LS + + + L L ++ N +
Sbjct: 392 LDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV---VKTCIPQTLEVLDVSNNN----L 443
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
L L+ L +S N L +P + L + +S N+L+ +P + F +S
Sbjct: 444 DSFSLFLPRLQELYISRNKLK-TLPDAS-LFPVLLVMKISRNQLK-SVPDGI-FDRLTS 498
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 7e-07
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
E + +NL S + + + I Q L+VL D+S N L L L L+++
Sbjct: 409 PEKMRFLNLSSTGIR-VVKTCIPQTLEVL---DVSNNNL-DSFS---LFLPRLQELYISR 460
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
N+ + ++P + L + +S N L + L++L+++ + N
Sbjct: 461 NKLK-TLPDAS-LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 49.0 bits (117), Expect = 1e-06
Identities = 18/131 (13%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKD--------LTTL 55
+ S + L I L + D ++N L P + + + L
Sbjct: 232 GSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRL 291
Query: 56 FLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL-EGEI 114
+ + + L ++ + + ++ + + L +L+ L++S N + E +
Sbjct: 292 HIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYL 351
Query: 115 PTNVPFGNFSS 125
+ G + S
Sbjct: 352 KNSACKGAWPS 362
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 4e-12
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRS 62
++L N + + L L+L+ N + + + L +L TL L NR
Sbjct: 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIV-SAVEPGAFNNLFNLRTLGLRSNRL 92
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+ F L++L LD+S N + + + L NLK L V N L +
Sbjct: 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL-----VYISHRA 147
Query: 123 FS 124
FS
Sbjct: 148 FS 149
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-11
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 5/113 (4%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQGS 65
+ N L + L L L L L IP +S L L L L
Sbjct: 134 EVGDNDLV-YISHRAFSGLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLRLRHLNINAI 191
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
SF+ L L+ L++S + + NL L++++ L +P
Sbjct: 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLA 243
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 1e-11
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
Q+ L +L+ S+P+ +L LI L L + + L L L ++
Sbjct: 156 QLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLD 214
Query: 65 SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
++ + +L L ++ NL+ ++ L L+ LN+SYN + I ++
Sbjct: 215 TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS-TIEGSM-LHELL 272
Query: 125 S 125
Sbjct: 273 R 273
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 2e-10
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 5/125 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + + + ++ N L L ++ L + + L L L L+ N
Sbjct: 199 LYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYN 258
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
L L+ + L L+ P + L+ L+ LNVS N+L T +
Sbjct: 259 PISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQL-----TTLEE 313
Query: 121 GNFSS 125
F S
Sbjct: 314 SVFHS 318
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 6e-10
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 7 INLFSNSLSGSLPSN-IQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+++ +L+ ++P +++L L L+LS N + + L L + L G +
Sbjct: 229 LSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVV 287
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
P +F L L L++S N L+ ++ NL+ L + N L
Sbjct: 288 EPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 8e-10
Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
L +++ + + L L L++S + +LT+L + ++P
Sbjct: 182 RLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVP 240
Query: 68 -KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ L L FL+LS N +S L L L+E+ + +L V F
Sbjct: 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL-----AVVEPYAFRG 294
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 2e-09
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 5 LQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
+ ++P I ++L DL NR+ + L L L N
Sbjct: 14 RAVLCHRKRFV-AVPEGIPTETRLL---DLGKNRIKTLNQDEFASFPHLEELELNENIVS 69
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
P +F +L +L L L SN L LSNL +L++S N++ + F
Sbjct: 70 AVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI-----VILLDYMF 124
Query: 124 SS 125
Sbjct: 125 QD 126
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 8e-06
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
L Y+ +NL N +S ++ ++ L L + L +L P GL L L ++G
Sbjct: 247 LVYLRFLNLSYNPIS-TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSG 305
Query: 60 NRSQGSIPKS-FESLASLEFLDLSSNNLS 87
N+ ++ +S F S+ +LE L L SN L+
Sbjct: 306 NQLT-TLEESVFHSVGNLETLILDSNPLA 333
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 4e-12
Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L L L + + L L L L N L +P L +LT LFL GNR
Sbjct: 111 HLDRCGLQ-ELGPGLFRGLAALQYLYLQDNAL-QALPDDTFRDLGNLTHLFLHGNRISSV 168
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
++F L SL+ L L N ++ P + L L L + N L + +P +
Sbjct: 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNL-----SALPTEALAP 223
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 6e-11
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 8/121 (6%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I L N +S ++ + + L L L N L +GL L L L+ N S+
Sbjct: 37 IFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSV 96
Query: 67 PKS-FESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ F L L L L L ++ L+ L+ L + N L +P F
Sbjct: 97 DPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNAL-----QALPDDTFR 150
Query: 125 S 125
Sbjct: 151 D 151
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 8e-11
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L N+ S+ L L L L L ++ + GL L L+L N Q +
Sbjct: 86 DLSDNAQLRSVDPATFHGLGRLHTLHLDRCGL-QELGPGLFRGLAALQYLYLQDNALQ-A 143
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+P +F L +L L L N +S ++ L +L L + NR+ + +
Sbjct: 144 LPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA-HVHPHA 196
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 4e-10
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
L N+L +LP + ++L L L L NR+ GL L L L NR
Sbjct: 135 YLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
P +F L L L L +NNLS ++L L L+ L ++ N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 5e-07
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 41 DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNL 100
+P+ I +FL GNR SF + +L L L SN L+ + L+ L
Sbjct: 25 AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 101 KELNVSYNRLEGEIPTNV 118
++L++S N +
Sbjct: 83 EQLDLSDNAQLRSVDPAT 100
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-05
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
L N +S S+P + L L L L NR+ P L L TL+L N ++
Sbjct: 159 FLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-AL 216
Query: 67 PKS-FESLASLEFLDLSSNNL 86
P L +L++L L+ N
Sbjct: 217 PTEALAPLRALQYLRLNDNPW 237
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 9e-12
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 4/114 (3%)
Query: 8 NLFSNSLS-GSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+L SN LS S L LDLS N + + GL+ L L + +
Sbjct: 58 SLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQM 116
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
S F SL +L +LD+S + LS+L+ L ++ N + ++
Sbjct: 117 SEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 170
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-11
Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLY--GDIPITISGLKDLTTLFLAGNRSQ 63
+ L SN L SLP + L L L LS N L G + G L L L+ N
Sbjct: 33 LELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI 91
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNV 118
++ +F L LE LD +NL S+ +L NL L++S+ +
Sbjct: 92 -TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR-VAFNGI 145
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 3e-11
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
++ + I L L L ++ N + I + L++LT L L+ + +
Sbjct: 132 DISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-Q 189
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ +F SL+SL+ L++S NN + L++L+ L+ S N +
Sbjct: 190 LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI-----MTSKKQELQ 244
Query: 125 S 125
Sbjct: 245 H 245
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+L L L +L L L++S N + L L L + N S
Sbjct: 181 DLSQCQLE-QLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSK 239
Query: 67 PKSFESL-ASLEFLDLSSNNLS 87
+ + +SL FL+L+ N+ +
Sbjct: 240 KQELQHFPSSLAFLNLTQNDFA 261
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 1e-11
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQG 64
++L NS++ ++ L+ L L + I T GL L L L N+
Sbjct: 34 YVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQ 93
Query: 65 SIPKSFESLASLEFLDLSSNNL-SGKIPK-SLEALSNLKELNVSYNRLE 111
+F LA+LE L L+ NL + + L++L+ L + N ++
Sbjct: 94 LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 1e-10
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+L + + +L ++ + L L L+ N + I GL L L L+ N
Sbjct: 279 TCDLSKSKIF-ALLKSVFSHFTDLEQLTLAQNEI-NKIDDNAFWGLTHLLKLNLSQNFLG 336
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+ FE+L LE LDLS N++ +S L NLKEL + N+L +VP G F
Sbjct: 337 SIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL-----KSVPDGIF 391
Query: 124 SS 125
Sbjct: 392 DR 393
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 3e-09
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 8/104 (7%)
Query: 17 SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK-SFESLAS 75
LP+++ + DLS+N + + S L+DL L + I +F L+S
Sbjct: 27 ELPAHVNYV------DLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSS 80
Query: 76 LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL-EGEIPTNV 118
L L L N + L+NL+ L ++ L + N
Sbjct: 81 LIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNF 124
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 4e-09
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 15/126 (11%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKV----------LIGLDLSINRLYGDIPITI-SGLKDLT 53
L ++ N S +N ++ + DLS +++ + ++ S DL
Sbjct: 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI-FALLKSVFSHFTDLE 302
Query: 54 TLFLAGNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
L LA N I +F L L L+LS N L + E L L+ L++SYN +
Sbjct: 303 QLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIR- 360
Query: 113 EIPTNV 118
+
Sbjct: 361 ALGDQS 366
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 52.1 bits (125), Expect = 1e-07
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
Q+ L N ++ + N L L+ L+LS N L G I + L L L L+ N +
Sbjct: 303 QLTLAQNEIN-KIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR 360
Query: 64 GSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
++ SF L +L+ L L +N L + L++L+++ + N
Sbjct: 361 -ALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 6e-05
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQG 64
+NL N L S+ S + +NL L LDLS N + + + GL +L L L N+ +
Sbjct: 328 LNLSQNFLG-SIDSRMFENLDKLEVLDLSYNHI-RALGDQSFLGLPNLKELALDTNQLK- 384
Query: 65 SIPKS-FESLASLEFLDLSSNNL 86
S+P F+ L SL+ + L +N
Sbjct: 385 SVPDGIFDRLTSLQKIWLHTNPW 407
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 16/133 (12%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTL----- 55
L I ++ L N + LDLS N + T +
Sbjct: 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLIL 246
Query: 56 --------FLAGNRSQGSIPKSFESL--ASLEFLDLSSNNLSGKIPKSLEALSNLKELNV 105
+ +F+ L + ++ DLS + + + ++L++L +
Sbjct: 247 SNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306
Query: 106 SYNRLEGEIPTNV 118
+ N + +I N
Sbjct: 307 AQNEIN-KIDDNA 318
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 2e-11
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 16/136 (11%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQ 63
+ L N L+ + S + L LDLS N L + S L+ L L L N
Sbjct: 68 SLLLSHNHLN-FISSEAFVPVPNLRYLDLSSNHL-HTLDEFLFSDLQALEVLLLYNNHIV 125
Query: 64 GSIPK-SFESLASLEFLDLSSNNLSGKIP----KSLEALSNLKELNVSYNRLEGEIPTNV 118
+ + +FE +A L+ L LS N +S + P K L L L++S N+L +
Sbjct: 126 -VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKL-----KKL 178
Query: 119 PFGNFSSQSFISNYAL 134
P + L
Sbjct: 179 PLTDLQKLPAWVKNGL 194
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+L SN L +L + +L+ L L L N + + L L+L+ N+
Sbjct: 94 DLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RF 151
Query: 67 P----KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS 106
P K L L LDLSSN L L+ L + +
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 2e-06
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 42 IPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLEFLDLSSNNLSGKIPKSLEALSN 99
+P ++ L L+ N + + L +L L LS N+L+ ++ + N
Sbjct: 33 VPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPN 89
Query: 100 LKELNVSYNRLEGEIPTNV 118
L+ L++S N L + +
Sbjct: 90 LRYLDLSSNHLH-TLDEFL 107
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-11
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L + ++ Q+L L L L+ N + + + SGL L L S
Sbjct: 58 DLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLA-S 114
Query: 66 IP-KSFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+ L +L+ L+++ N + S K+P+ L+NL+ L++S N++ ++ +
Sbjct: 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI-----QSIYCTDL 169
Query: 124 SS 125
Sbjct: 170 RV 171
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 7e-09
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L N L L S + L LDLS + I L L+TL L GN Q S
Sbjct: 34 DLSFNPLR-HLGSYSFFSFPELQVLDLSRCEI-QTIEDGAYQSLSHLSTLILTGNPIQ-S 90
Query: 66 IP-KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
+ +F L+SL+ L NL+ + L LKELNV++N +
Sbjct: 91 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 15/125 (12%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQGS 65
+L+ SL + +LK L L+++ N + +P S L +L L L+ N+ Q S
Sbjct: 106 VAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-S 163
Query: 66 IP-KSFESLASLEF----LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
I L + LDLS N ++ I LKEL + N+L +VP
Sbjct: 164 IYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQL-----KSVPD 217
Query: 121 GNFSS 125
G F
Sbjct: 218 GIFDR 222
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 9e-08
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 11 SNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP-K 68
+ +P N+ + K L DLS N L + +L L L+ Q +I
Sbjct: 16 ELNFY-KIPDNLPFSTKNL---DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDG 70
Query: 69 SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+++SL+ L L L+ N + + LS+L++L L + N P G+ +
Sbjct: 71 AYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLE-NFPIGHLKT 125
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-11
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 12 NSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF 70
L + + L L L+L + + D+P ++ L L L ++GN P SF
Sbjct: 182 KKLE-YISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSF 238
Query: 71 ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
L+SL+ L + ++ +S + + L++L ELN+++N L +++P F+
Sbjct: 239 HGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNL-----SSLPHDLFTP 288
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 2e-10
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+NL ++ +P+ + L L L++S N P + GL L L++ ++
Sbjct: 201 LNLGMCNIK-DMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIE 258
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+F+ LASL L+L+ NNLS L L EL++ +N
Sbjct: 259 RNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 3e-10
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLS-INRLYGDIPITI-SGLKDLTTLFLAGNRS 62
++ L +N + S+PS + L+ LDL + +L I GL +L L L
Sbjct: 151 ELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKL-EYISEGAFEGLFNLKYLNLGMCNI 208
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+ +P + L LE L++S N+ P S LS+LK+L V +++ I N
Sbjct: 209 K-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS-LIERNA 261
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 5e-09
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQGS 65
+NL N++ ++L L L L N + I + +GL L TL L N
Sbjct: 80 LNLMENNIQMIQADTFRHLHHLEVLQLGRNSI-RQIEVGAFNGLASLNTLELFDNWLT-V 137
Query: 66 IPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS-YNRLEGEIPTNV 118
IP +FE L+ L L L +N + + + +L L++ +LE I
Sbjct: 138 IPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLE-YISEGA 191
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 54.4 bits (131), Expect = 2e-08
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ + L ++P I + L L N Q +F L LE L L N++
Sbjct: 59 VVCTRRGL-SEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIE 115
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVPFG 121
+ L++L L + N L IP+
Sbjct: 116 VGAFNGLASLNTLELFDNWLT-VIPSGAFEY 145
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 4/81 (4%)
Query: 8 NLFSNSLSGSLPSN-IQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ N + L L L + +++ GL L L LA N S+
Sbjct: 224 EMSGNHFP-EIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS-SL 281
Query: 67 PKS-FESLASLEFLDLSSNNL 86
P F L L L L N
Sbjct: 282 PHDLFTPLRYLVELHLHHNPW 302
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-11
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 27/165 (16%)
Query: 153 DEFNEWHLLGTESLGSVYK-WIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHR 209
+++ + +GT S G K D + K + E + S+ + + ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 210 NLIKILTTIAILILKPWYLSSCVM---PNGD--------------FPER--LNIMIDMAL 250
N+++ I Y+ VM GD E L +M + L
Sbjct: 66 NIVRYYDRIIDRTNTTLYI---VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 251 AFEYLHHGRSTP--MVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
A + H ++H DLKP+N LD + DF ++++L
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-11
Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 21/135 (15%)
Query: 176 DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL--------TTIAILILKPW- 226
D A+K ++ + ++H+ H N+++++ +L P+
Sbjct: 53 DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112
Query: 227 -------YLSSCVMPNGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277
+ E L +++ + E +H + H DLKP+N LL +
Sbjct: 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGD 169
Query: 278 DMVAHVSDFNISKLL 292
+ + D
Sbjct: 170 EGQPVLMDLGSMNQA 184
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 4e-11
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 12 NSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF 70
LS + + L L L+L++ L +IP ++ L L L L+GN P SF
Sbjct: 171 KRLS-YISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSF 227
Query: 71 ESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ L L+ L + + + + + L +L E+N+++N L T +P F+
Sbjct: 228 QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL-----TLLPHDLFTP 277
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 4e-10
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 7/122 (5%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLS-INRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++ L +N + S+PS + L LDL + RL GL +L L LA +
Sbjct: 140 ELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
IP + L L+ LDLS N+LS P S + L +L++L + ++++ I N F N
Sbjct: 199 -EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ-VIERNA-FDNL 254
Query: 124 SS 125
S
Sbjct: 255 QS 256
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 3e-09
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+NL N + ++ ++L+ L L LS N + +GL +L TL L NR +I
Sbjct: 69 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT-TI 127
Query: 67 PK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS-YNRLEGEIPTNV 118
P +F L+ L+ L L +N + + + +L+ L++ RL I
Sbjct: 128 PNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLS-YISEGA 180
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 56.3 bits (136), Expect = 4e-09
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
NL +L +P+ + L L LDLS N L P + GL L L++ ++ Q
Sbjct: 191 NLAMCNLR-EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIER 248
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+F++L SL ++L+ NNL+ L +L+ +++ +N
Sbjct: 249 NAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 2e-08
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ L ++P IS + L L N+ Q SF+ L LE L LS N++
Sbjct: 48 VICVRKNL-REVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIE 104
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ L+NL L + NRL T +P G F
Sbjct: 105 IGAFNGLANLNTLELFDNRL-----TTIPNGAFV 133
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
L + +++L N LS ++ Q L L L + +++ L+ L + LA
Sbjct: 206 LIKLDELDLSGNHLS-AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAH 264
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNL 86
N F L LE + L N
Sbjct: 265 NNLTLLPHDLFTPLHHLERIHLHHNPW 291
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 62.5 bits (151), Expect = 5e-11
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L L+ + +++ L ++ LDLS NRL +P ++ L+ L L + N + +
Sbjct: 445 VLHLAHKDLT--VLCHLEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALE-N 500
Query: 66 IPKSFESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRL 110
+ +L L+ L L +N L + L + L LN+ N L
Sbjct: 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 2e-08
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
L L+ L + + L +T L L+ NR + ++P + +L LE L S N L +
Sbjct: 446 LHLAHKDL--TVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NV 501
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ L L+EL + NRL+ + P +
Sbjct: 502 D-GVANLPRLQELLLCNNRLQ-QSAAIQPLVSCPR 534
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 8e-08
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 11/115 (9%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLD--------LSINRLYGDIPITISGLKDLTTLF 56
+ + + + +Q L +D ++ + + D+ L
Sbjct: 388 IILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLH 447
Query: 57 LAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
LA ++ E L + LDLS N L +P +L AL L+ L S N LE
Sbjct: 448 LAHKDL--TVLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 499
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 49.0 bits (116), Expect = 1e-06
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQG 64
++L N L +LP + L+ L L S N L ++ ++ L L L L NR Q
Sbjct: 467 HLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQS 523
Query: 65 SIPKSFESLASLEFLDLSSNNLSGK---IPKSLEALSNLKEL 103
+ + S L L+L N+L + + E L ++ +
Sbjct: 524 AAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 6e-04
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Query: 12 NSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI--TISGLKDLTTLFLAGNRSQGSI--- 66
L P N L +I L +++ L + S LK + + A S
Sbjct: 372 KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLL 431
Query: 67 --PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
A + L L+ +L+ + LE L + L++S+NRL +P +
Sbjct: 432 ENSVLKMEYADVRVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPAL 482
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 5e-11
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L N L S I NLK L L L N + P +S L L LF N + S
Sbjct: 292 LELNENQLED--ISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNN--KVSD 345
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQ 126
S +L ++ +L N +S P L L+ + +L ++ N S
Sbjct: 346 VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNY--KANVSIP 401
Query: 127 SFISNY 132
+ + N
Sbjct: 402 NTVKNV 407
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 7e-11
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++++ SN +S S + L L L + N++ P+ L +L L L GN Q
Sbjct: 181 RLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPL--GILTNLDELSLNGN--QLK 234
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+ SL +L LDL++N +S P L L+ L EL + N++ P
Sbjct: 235 DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 8e-11
Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ + + + ++ L L ++ S N+L P+ L L + + N
Sbjct: 45 LDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDITPL--KNLTKLVDILMNNN 100
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
+ P +L +L L L +N ++ P L+ L+NL L +S N +
Sbjct: 101 QIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD 148
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
L + L + + + L +TTL E L +L +
Sbjct: 18 FTDTALAEKMKTVLGKTNVTDTVSQ--TDLDQVTTLQADRL--GIKSIDGVEYLNNLTQI 73
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
+ S+N L+ P L+ L+ L ++ ++ N++ P
Sbjct: 74 NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP 107
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N L + +L L LDL+ N++ P+ SGL LT L L N+
Sbjct: 226 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPL--SGLTKLTELKLGANQISNIS 281
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
P L +L L+L+ N L P + L NL L + +N + P
Sbjct: 282 P--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 7e-10
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ LF+N ++ ++NL L L+LS N + +SGL L L +
Sbjct: 116 GLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQVTD-- 169
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
K +L +LE LD+SSN +S L L+NL+ L + N++ P
Sbjct: 170 -LKPLANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP 216
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 9/111 (8%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
+ L+ N++S S + +L L L N++ +++ L ++ L N+
Sbjct: 314 LTLYFNNISDI--SPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLT 369
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
P +L + L L+ + +N+ N N I
Sbjct: 370 P--LANLTRITQLGLNDQAWTNAPV---NYKANVSIPNTVKNVTGALIAPA 415
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 28 LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLS 87
L ++ + I T + L + L ++ L + L +
Sbjct: 3 LGSATITQDTPINQIF-TDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIK 59
Query: 88 GKIPKSLEALSNLKELNVSYNRLEGEIP 115
+E L+NL ++N S N+L P
Sbjct: 60 --SIDGVEYLNNLTQINFSNNQLTDITP 85
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 8e-11
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ + N+L+ SLP+ L+ L++S N+L +P+ GL +L+
Sbjct: 65 TLVIPDNNLT-SLPALPPELRT---LEVSGNQLT-SLPVLPPGLLELSIFSNPLT----H 115
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+P + L L + N L+ +P L+EL+VS N+L
Sbjct: 116 LP---ALPSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLA 154
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 4e-09
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 17/110 (15%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+ N L+ SLP L L + L P SGL L + GN+ S+P
Sbjct: 87 EVSGNQLT-SLPVLPPGLLELSIFSNPLTHL----PALPSGLCKLW---IFGNQLT-SLP 137
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
L+ L +S N L+ +P S L +L N+L +P
Sbjct: 138 ---VLPPGLQELSVSDNQLA-SLPAL---PSELCKLWAYNNQLT-SLPML 179
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 4e-09
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
L++ + L +P + +TTL + N S+P L L++S N L+ +
Sbjct: 45 LNVGESGL-TTLPDCL--PAHITTLVIPDNNLT-SLP---ALPPELRTLEVSGNQLT-SL 96
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTN 117
P L L + L +P+
Sbjct: 97 PVLPPGLLELSIFSNPLTHLP-ALPSG 122
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 55.3 bits (133), Expect = 1e-08
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++++ N L+ SLP+ L L N+L +P+ SGL++L+ ++ N+ S
Sbjct: 145 ELSVSDNQLA-SLPALPSELCKL---WAYNNQL-TSLPMLPSGLQELS---VSDNQLA-S 195
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+P + L L +N L+ +P S LKEL VS NRL
Sbjct: 196 LP---TLPSELYKLWAYNNRLT-SLPALP---SGLKELIVSGNRLT 234
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ + N L+ SLP LK L +S NRL +P+ SGL +L + N+
Sbjct: 225 ELIVSGNRLT-SLPVLPSELKEL---MVSGNRL-TSLPMLPSGL---LSLSVYRNQLT-R 275
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
+P+S L+S ++L N LS + ++L +++ + R + +
Sbjct: 276 LPESLIHLSSETTVNLEGNPLSERTLQALREITSAPGYSGPIIRFDMAGAS 326
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 41.8 bits (98), Expect = 2e-04
Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 5/99 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ + N L+ SLP L L + N+L +P ++ L TT+ L GN
Sbjct: 245 ELMVSGNRLT-SLPMLPSGLLSL---SVYRNQL-TRLPESLIHLSSETTVNLEGNPLSER 299
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELN 104
++ + S + L
Sbjct: 300 TLQALREITSAPGYSGPIIRFDMAGASAPRETRALHLAA 338
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 1e-10
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 9/115 (7%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L SN LS SLPS L L L L+ N+L +P I LK+L TL++ N+ Q +
Sbjct: 43 DLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQ-A 99
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNV 118
+P F+ L +L L L N L +P + ++L+ L L++ YN L+ +P V
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGV 152
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 6e-10
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 21/128 (16%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+ L N L +LP+ I + LK L L ++ N+L +PI + L +L L L N+ +
Sbjct: 65 LLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQLK 122
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNVSYNRLEGEIPTN 117
S+P F+SL L +L L N L +SL L++LKEL + N+L
Sbjct: 123 -SLPPRVFDSLTKLTYLSLGYNEL-----QSLPKGVFDKLTSLKELRLYNNQL-----KR 171
Query: 118 VPFGNFSS 125
VP G F
Sbjct: 172 VPEGAFDK 179
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 6e-07
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
L N L SLP + +L L L L N L +P + L L L L N+ +
Sbjct: 115 RLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL-QSLPKGVFDKLTSLKELRLYNNQLK-R 171
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+P+ F+ L L+ L L +N L + ++L LK L + N
Sbjct: 172 VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 1e-05
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 11/73 (15%)
Query: 51 DLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNV 105
D L L N+ K+F L L L L+ N L +L A L NL+ L V
Sbjct: 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-----TLPAGIFKELKNLETLWV 92
Query: 106 SYNRLEGEIPTNV 118
+ N+L+ +P V
Sbjct: 93 TDNKLQ-ALPIGV 104
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 1e-10
Identities = 30/169 (17%), Positives = 54/169 (31%), Gaps = 36/169 (21%)
Query: 153 DEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
+F E L+G+ G V+K +D IK E+A R + + + H N+
Sbjct: 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNI 66
Query: 212 IK-------ILTTIAILILKPWYLSSC----VM---PNGD------------FPER--LN 243
+ + M G + L
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 244 IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ + +Y+H + +++ DLKPSN L + + DF + L
Sbjct: 127 LFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 61.0 bits (148), Expect = 1e-10
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 9/128 (7%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ N L +P ++ Q +L ++S N + I L L L ++ NR Q
Sbjct: 5 VDRSKNGLI-HVPKDLSQKTTIL---NISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
F+ LE+LDLS N L KI NLK L++S+N + +P FGN S
Sbjct: 61 DISVFKFNQELEYLDLSHNKLV-KIS--CHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQ 116
Query: 126 QSFISNYA 133
F+
Sbjct: 117 LKFLGLST 124
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 3e-09
Identities = 15/109 (13%), Positives = 37/109 (33%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
I + L + +LK L + + ++ + +
Sbjct: 253 SISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGT 312
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ ++ LD S+N L+ + ++ L+ L+ L + N+L+
Sbjct: 313 RMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLK 361
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 4e-09
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRL--YGDIPITISGLKDLTTLFLA 58
+ L ++ +N L+ ++ N +L L L L +N+L I + +K L L ++
Sbjct: 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDIS 382
Query: 59 GNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
N K SL L++SSN L+ I + L +K L++ N+++ IP
Sbjct: 383 QNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL--PPRIKVLDLHSNKIK-SIPKQ 439
Query: 118 V 118
V
Sbjct: 440 V 440
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 8e-09
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Query: 8 NLFSNSLSGSLPSNI---QNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQ 63
L N L L +K L LD+S N + Y + S K L +L ++ N
Sbjct: 354 ILQMNQLK-ELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILT 412
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+I + ++ LDL SN + IPK + L L+ELNV+ N+L +VP G F
Sbjct: 413 DTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQL-----KSVPDGIF 464
Query: 124 SS 125
Sbjct: 465 DR 466
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 4e-07
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 2/120 (1%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ + + S+ + + + +++ + S + L + N
Sbjct: 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLS--GKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
++ ++ L LE L L N L KI + + +L++L++S N + +
Sbjct: 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGD 394
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 9e-07
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+ N + S + + L LDLS N+L I+ +L L L+ N ++P
Sbjct: 51 IISHNRIQYLDISVFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAFD-ALP 106
Query: 68 KS--FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
F +++ L+FL LS+ +L + L+ K L V +
Sbjct: 107 ICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED 156
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 9e-05
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+ N+ ++++ LP I+ L DL N++ IP + L+ L L +A N+ +
Sbjct: 406 MSSNILTDTIFRCLPPRIKVL------DLHSNKI-KSIPKQVVKLEALQELNVASNQLK- 457
Query: 65 SIPK-SFESLASLEFLDLSSNNL 86
S+P F+ L SL+ + L +N
Sbjct: 458 SVPDGIFDRLTSLQKIWLHTNPW 480
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-10
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQG 64
I L N++ +P K L +DLS N++ ++ GL+ L +L L GN+
Sbjct: 37 IRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQI-SELAPDAFQGLRSLNSLVLYGNKIT- 93
Query: 65 SIPKS-FESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+PKS FE L SL+ L L++N ++ + + + L NL L++ N+L + G
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKL-----QTIAKGT 147
Query: 123 FSS 125
FS
Sbjct: 148 FSP 150
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 52.0 bits (125), Expect = 4e-08
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 11/108 (10%)
Query: 18 LPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLE 77
LP I + L N + P S K L + L+ N+ P +F+ L SL
Sbjct: 30 LPETITEI------RLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLN 83
Query: 78 FLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
L L N ++ E L +L+ L ++ N++ + F
Sbjct: 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKI-----NCLRVDAFQD 126
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-08
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQG 64
I+L +N +S L + Q L+ L L L N++ ++P ++ GL L L L N+
Sbjct: 61 IDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKI-TELPKSLFEGLFSLQLLLLNANKIN- 117
Query: 65 SIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ +F+ L +L L L N L + L ++ ++++ N
Sbjct: 118 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 2e-10
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQGSI 66
N + SG + L GLDLS N L + L +L L+ + +
Sbjct: 210 NAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QV 268
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
PK A L LDLS N L P E L + L++ N
Sbjct: 269 PK--GLPAKLSVLDLSYNRLDR-NPSPDE-LPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 9e-09
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 7 INLFSNSLSGSL-------PSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAG 59
++L N G P L+VL + + G + L L L+
Sbjct: 178 LDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSH 237
Query: 60 NRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
N + + S + + L L+LS L ++PK L + L L++SYNRL+
Sbjct: 238 NSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL--PAKLSVLDLSYNRLDR 288
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 2e-07
Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 9/120 (7%)
Query: 5 LQINLFSNSLSGSLPSNIQNLKV--LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
L + S + + + +Q L L ++ + L+TL L+ N
Sbjct: 126 LNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185
Query: 63 QGSI-------PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
G P F +L L + SG A L+ L++S+N L
Sbjct: 186 LGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG 245
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 49.1 bits (117), Expect = 7e-07
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 10/118 (8%)
Query: 4 ILQINLFSNSLSGSLPSNI-----QNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFL 57
+ ++ L + ++G+ P + +L +L ++S + + L L +
Sbjct: 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSI 156
Query: 58 AGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKS----LEALSNLKELNVSYNRLE 111
A S + +L LDLS N G+ L+ L + +E
Sbjct: 157 AQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 59.4 bits (144), Expect = 2e-10
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 32/159 (20%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFN-LQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
+LG + +V++ +T AIKVFN + R + EV K + H+N++K+
Sbjct: 16 ILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 217 TIAILILKPWYLSSCVM---PNGD-------------FPER--LNIMIDMALAFEYLHHG 258
+ L +M P G PE L ++ D+ +L
Sbjct: 75 IEEETTTRHKVL---IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 259 RSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISKLLG 293
+VH ++KP N + D V ++DF ++ L
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 3e-10
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 13/113 (11%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
I++ +NSL LP +L+ + N+L ++P + L LT ++ N +
Sbjct: 158 IDVDNNSLK-KLPDLPPSLEFI---AAGNNQL-EELP-ELQNLPFLTAIYADNNS----L 207
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVP 119
K + SLE + +N L L+ L L + N L+ +P P
Sbjct: 208 KKLPDLPLSLESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPP 257
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-10
Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 17/127 (13%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
++ + S++L+ +P +N+K + + + P +++ L
Sbjct: 10 NTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDC 68
Query: 61 RSQG------------SIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ S+P E LE L S N+L+ ++P+ ++L +L N +
Sbjct: 69 LDRQAHELELNNLGLSSLP---ELPPHLESLVASCNSLT-ELPELPQSLKSLLVDNNNLK 124
Query: 109 RLEGEIP 115
L P
Sbjct: 125 ALSDLPP 131
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
NSL+ LP Q+LK L+ + ++ L P L L ++ N+ + +P
Sbjct: 97 VASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLPP-------LLEYLGVSNNQLE-KLP 147
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
++ + L+ +D+ +N+L K+P +L+ + N+LE E+P N
Sbjct: 148 -ELQNSSFLKIIDVDNNSLK-KLPDL---PPSLEFIAAGNNQLE-ELP---ELQNLPF 196
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
I +N L LP +QNL L + N L +P L ++ N
Sbjct: 177 FIAAGNNQLE-ELP-ELQNLPFLTAIYADNNSL-KKLP---DLPLSLESIVAGNNIL--E 228
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
++L L + +N L +P +L+ LNV N L
Sbjct: 229 ELPELQNLPFLTTIYADNNLLK-TLPDLPP---SLEALNVRDNYLT 270
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-06
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 16/111 (14%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ I +N L +LP +L+ L D + L P L L +
Sbjct: 236 LPFLTTIYADNNLLK-TLPDLPPSLEALNVRDNYLTDL----PELPQSLTFLDVSENIFS 290
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ E +L +L+ SSN + + +L+ELNVS N+L
Sbjct: 291 ----GLS---ELPPNLYYLNASSNEIR-SLCDLP---PSLEELNVSNNKLI 330
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 3e-06
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
N+ +N L LP+ L+ L S N L ++P ++L L + N + P
Sbjct: 323 NVSNNKLI-ELPALPPRLERL---IASFNHL-AEVP---ELPQNLKQLHVEYNPLR-EFP 373
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
ES+ L N+ ++P E NLK+L+V N L
Sbjct: 374 DIPESVEDLRM-----NSHLAEVP---ELPQNLKQLHVETNPLR 409
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 25/120 (20%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKD--------------- 51
+ N L+ +P QNLK L + N L + P ++D
Sbjct: 342 LIASFNHLA-EVPELPQNLKQL---HVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQ 396
Query: 52 -LTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
L L + N + P + S+E L ++S + + E L++ ++
Sbjct: 397 NLKQLHVETNPLR-EFP---DIPESVEDLRMNSERVVDPYEFAHETTDKLEDDVFEHHHH 452
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 5e-05
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 28/123 (22%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
I +NSL LP +L+ + N L + + L LTT++ N +
Sbjct: 199 AIYADNNSLK-KLPDLPLSLESI---VAGNNIL--EELPELQNLPFLTTIYADNNL-LKT 251
Query: 66 IPKSFESL-----------------ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+P SL SL FLD+S N S + + NL LN S N
Sbjct: 252 LPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFS-GLSELPP---NLYYLNASSN 307
Query: 109 RLE 111
+
Sbjct: 308 EIR 310
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 7e-04
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+L NS +P QNLK L + N L + P ++DL + R
Sbjct: 381 DLRMNSHLAEVPELPQNLKQL---HVETNPLR-EFPDIPESVEDL---RMNSERVVDPYE 433
Query: 68 KSFESLASLEFLDLSSNNLS 87
+ E+ LE ++
Sbjct: 434 FAHETTDKLEDDVFEHHHHH 453
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 59.4 bits (143), Expect = 3e-10
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 6/92 (6%)
Query: 35 INRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKS 93
D + G ++LT L++ + + L L L + + L P +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 94 LEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
L LN+S+N L ++ +
Sbjct: 76 FHFTPRLSRLNLSFNAL-----ESLSWKTVQG 102
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 56.3 bits (135), Expect = 3e-09
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 2/101 (1%)
Query: 11 SNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQGSIPKS 69
+ + ++ + L L + + + + GL +L L + + + P +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 70 FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
F L L+LS N L + +L+EL +S N L
Sbjct: 76 FHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPL 115
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-10
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 1 LEYILQINLFSNSL-SGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLA 58
L ++ + L +N L S + + Q +K L + ++ + I LT L L
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT---IPQGLPPSLTELHLD 200
Query: 59 GNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
GN+ + S + L +L L LS N++S SL +L+EL+++ N+L ++P
Sbjct: 201 GNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258
Query: 118 VP 119
+
Sbjct: 259 LA 260
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG 64
+++L N ++ + + + L L L LS N + +++ L L L N+
Sbjct: 196 ELHLDGNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV- 253
Query: 65 SIPKSFESLASLEFLDLSSNNLSG------KIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+P ++ + L +NN+S P ++ +++ N ++ +
Sbjct: 254 KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ---YWEI 310
Query: 119 PFGNFS 124
F
Sbjct: 311 QPSTFR 316
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 4e-09
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 14/123 (11%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ L +N +S + L L L LS N+L ++P + K L L + N
Sbjct: 81 LILINNKIS-KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEIT-K 135
Query: 66 IPK-SFESLASLEFLDLSSNNL-SGKIPK-SLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+ K F L + ++L +N L S I + + + L + ++ + T +P G
Sbjct: 136 VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI-----TTIPQGL 190
Query: 123 FSS 125
S
Sbjct: 191 PPS 193
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR---- 61
+ L NS+S ++ + N L L L+ N+L +P ++ K + ++L N
Sbjct: 221 LGLSFNSIS-AVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278
Query: 62 --SQGSIPKSFESLASLEFLDLSSNNLSGKI--PKSLEALSNLKELNVSYNR 109
+ P AS + L SN + P + + + + +
Sbjct: 279 GSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 4e-08
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ S L +P + D L L N+ F++L +L L L +N +S
Sbjct: 36 VQCSDLGL-EKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKIS 92
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVP 119
P + L L+ L +S N+L+ E+P +P
Sbjct: 93 PGAFAPLVKLERLYLSKNQLK-ELPEKMP 120
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG------DIPITISGLKDLTT 54
++ +++L +N L +P + + K + + L N + P + +
Sbjct: 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSG 297
Query: 55 LFLAGNRSQGSI--PKSFESLASLEFLDLSSN 84
+ L N Q P +F + + L +
Sbjct: 298 VSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 6e-10
Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 36/165 (21%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHR 209
+++ +G S G D IK N+ + + V N++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 210 NLIK----ILTTIAILILKPWYLSSCVM---PNGD------------FPER--LNIMIDM 248
N+++ ++ I VM GD F E L+ + +
Sbjct: 84 NIVQYRESFEENGSLYI---------VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQI 134
Query: 249 ALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
LA +++H + ++H D+K N L +D + DF I+++L
Sbjct: 135 CLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 58.8 bits (142), Expect = 6e-10
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 12/110 (10%)
Query: 5 LQINLFSNSLSG---SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR 61
L N F N++SG S + + N + + + + L L
Sbjct: 13 LSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLN 70
Query: 62 SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
S+P + + L+++ N L +P E ++L+ L+ NRL
Sbjct: 71 LS-SLPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLS 113
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 57.3 bits (138), Expect = 2e-09
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 16/104 (15%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+ N+L SLP +L+ L D NRL +P + LK L + N+ +P
Sbjct: 86 EITQNALI-SLPELPASLEYL---DACDNRL-STLPELPASLKHLD---VDNNQLT-MLP 136
Query: 68 KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
E A LE+++ +N L+ +P E ++L+ L+V N+L
Sbjct: 137 ---ELPALLEYINADNNQLT-MLP---ELPTSLEVLSVRNNQLT 173
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 1e-07
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTT----LFLAGNRSQ 63
++ +N L+ LP ++L+ L D+S N L +P NR
Sbjct: 166 SVRNNQLT-FLPELPESLEAL---DVSTNLL-ESLPAVPVRNHHSEETEIFFRCRENRIT 220
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
IP++ SL + L N LS +I +SL + + +
Sbjct: 221 -HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTAQPDYHGPRIYFSMSDG 271
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 6e-10
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 7 INLFSNSLSGSLPSN--IQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+ L +N + L + + L L ++ S N++ DI G + + L NR +
Sbjct: 37 LRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKI-TDIEEGAFEGASGVNEILLTSNRLE 94
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
++ F+ L SL+ L L SN ++ S LS+++ L++ N++ T V G
Sbjct: 95 -NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI-----TTVAPGA 148
Query: 123 FSS 125
F +
Sbjct: 149 FDT 151
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 7e-08
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 17 SLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSIPKSFESLA 74
+P +I Q L L+ N I L L + + N+ +FE +
Sbjct: 25 KIPEHIPQYTAEL---RLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS 81
Query: 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV 118
+ + L+SN L K + L +LK L + NR+ + +
Sbjct: 82 GVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDS 124
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 2e-06
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQG 64
IN +N ++ + + + + L+ NRL ++ + GL+ L TL L NR
Sbjct: 62 INFSNNKIT-DIEEGAFEGASGVNEILLTSNRL-ENVQHKMFKGLESLKTLMLRSNRIT- 118
Query: 65 SIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ SF L+S+ L L N ++ P + + L +L LN+ N
Sbjct: 119 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLAN 163
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 8e-10
Identities = 42/218 (19%), Positives = 67/218 (30%), Gaps = 44/218 (20%)
Query: 99 NLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQDSKRTSYLDILQATDEFNEW 158
+L N+ + + P V F +S++ S + S+ S+ F
Sbjct: 12 DLGTENLYFQSMHQLQPRRVSFRGEASETLQSP----GYDPSRPESFFQ-----QSFQRL 62
Query: 159 HLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVH---KNVRHRNLIK- 213
LG S G V+K D A+K EV K +H ++
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 214 -----------ILT-----TIAILILKPWYLSSCVMPNGDFPER--LNIMIDMALAFEYL 255
+ T ++ PE + D LA +L
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHCEAW---------GASLPEAQVWGYLRDTLLALAHL 173
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
H +VH D+KP+N L + DF + LG
Sbjct: 174 HSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 8e-10
Identities = 36/159 (22%), Positives = 63/159 (39%), Gaps = 32/159 (20%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFN-LQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
+LG + +V++ +T AIKVFN + R + EV K + H+N++K+
Sbjct: 16 ILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 217 TIAILILKPWYLSSCVM---PNGD-------------FPER--LNIMIDMALAFEYLHHG 258
+ L +M P G PE L ++ D+ +L
Sbjct: 75 IEEETTTRHKVL---IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 259 RSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISKLLG 293
+VH ++KP N + D V ++DF ++ L
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 57.6 bits (140), Expect = 8e-10
Identities = 34/159 (21%), Positives = 60/159 (37%), Gaps = 23/159 (14%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK 213
LG G+VY ++ +A+KV L+ + E+ ++RH N+++
Sbjct: 15 RPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 214 ILTTIA-----ILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRST 261
+ LIL+ Y + + F E+ + ++A A Y H S
Sbjct: 74 LYGYFHDATRVYLILE--YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SK 128
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETF 300
++H D+KP N LL ++DF S
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL 167
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 9e-10
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQ 63
+NL N +++ +L L L + + I +GL L L + + Q
Sbjct: 128 FLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
PKS +S+ ++ L L + ++ S+++ L + L+ + + G
Sbjct: 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247
Query: 124 SS 125
+S
Sbjct: 248 NS 249
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 5e-09
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 11 SNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKS 69
S SL+ S+PS + + +K L DLS NR+ + +L L L N S
Sbjct: 40 SGSLN-SIPSGLTEAVKSL---DLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDS 95
Query: 70 FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
F SL SLE LDLS N LS + LS+L LN+ N + + F + +
Sbjct: 96 FSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTK 150
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
+L +N ++ + ++ Q L L L+ N + I S L L L L+ N +
Sbjct: 58 DLSNNRIT-YISNSDLQRCVNLQALVLTSNGI-NTIEEDSFSSLGSLEHLDLSYNYLS-N 114
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNV 118
+ S F+ L+SL FL+L N SL L+ L+ L V +I
Sbjct: 115 LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKD 169
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 14/128 (10%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG- 64
++ + ++ L P ++++++ + L L + + + I + + L L
Sbjct: 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTF 237
Query: 65 ---SIPK----SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
+ S + + ++ +L ++ K L +S L EL S N+L +
Sbjct: 238 HFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQL-----KS 291
Query: 118 VPFGNFSS 125
VP G F
Sbjct: 292 VPDGIFDR 299
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 13/118 (11%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITIS--------GLKD 51
++ + + L L + L+L L +S
Sbjct: 197 IQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFT 255
Query: 52 LTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKS-LEALSNLKELNVSYN 108
+ + + K ++ L L+ S N L +P + L++L+++ + N
Sbjct: 256 FRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLKS-VPDGIFDRLTSLQKIWLHTN 311
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 3e-04
Identities = 14/76 (18%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 12 NSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKS-F 70
+ LS +++ + ++ L+ + ++ + L L + N+ + S+P F
Sbjct: 240 SELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIF 297
Query: 71 ESLASLEFLDLSSNNL 86
+ L SL+ + L +N
Sbjct: 298 DRLTSLQKIWLHTNPW 313
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 9e-10
Identities = 29/154 (18%), Positives = 64/154 (41%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LG G V+ + T VA+K + +F ++ V K ++H L+
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLV 246
Query: 213 KILTTIAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHG 258
K+ A++ +P Y+ + M G P+ ++ +A ++
Sbjct: 247 KL---HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE-- 301
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL+ +N L+ +V ++DF +++++
Sbjct: 302 -QRNYIHRDLRAANILVSASLVCKIADFGLARVI 334
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 58.5 bits (141), Expect = 9e-10
Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 46/172 (26%)
Query: 157 EWHL---LGTESLGSVYKWIFLDETN--VAIKVFNLQL-----ERAFRSFDSKCEVHKNV 206
W + LGT G V +WI +T VAIK +L ER ++ K +
Sbjct: 15 PWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSPKNRERWCLEI----QIMKKL 69
Query: 207 RHRNLIKIL----TTIAILILKPWYLSSCVM---PNGD-------------FPER--LNI 244
H N++ + L M GD E +
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLL---AMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 245 MIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLLG 293
+ D++ A YLH R ++H DLKP N +L + ++ + D +K L
Sbjct: 127 LSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD 175
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 57.3 bits (139), Expect = 1e-09
Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 39/167 (23%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIK---VFNLQLERAFRSFDSKCEVHKNVRH 208
F +G VY+ L D VA+K +F+L +A + ++ K + H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 209 RNLIK----ILTTIAILILKPWYLSSCVM---PNGD--------------FPER--LNIM 245
N+IK + + I V+ GD PER
Sbjct: 92 PNVIKYYASFIEDNELNI---------VLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 246 IDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ + A E++H R ++H D+KP+N + V + D + +
Sbjct: 143 VQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFF 186
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 2e-09
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L I QI ++ + S+ IQ L + L L+ N+L DI ++ LK+L LFL N
Sbjct: 42 LNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNGNKL-TDIK-PLTNLKNLGWLFLDEN 97
Query: 61 RSQGSIPK--SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ I S + L L+ L L N +S I L L L+ L + N++
Sbjct: 98 K----IKDLSSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKIT 144
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 50.1 bits (119), Expect = 4e-07
Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
I +L + D +T + L + + + + S+ + + L ++ L
Sbjct: 15 FPDDAFAETIKDNLKKKSV-TDA-VTQNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKL 70
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L+ N L+ I K L L NL L + N+++
Sbjct: 71 FLNGNKLT-DI-KPLTNLKNLGWLFLDENKIK 100
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 46.3 bits (109), Expect = 9e-06
Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 6/157 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + + L +N ++ + + L L L L N++ DI ++GL L L+L+ N
Sbjct: 130 LPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-DIVP-LAGLTKLQNLYLSKN 185
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
S ++ L +L+ L+L S K L + + L +
Sbjct: 186 --HISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEIISDDG 243
Query: 121 GNFSSQSFISNYALCAHQDSKRTSYLDILQATDEFNE 157
+ I +A F+
Sbjct: 244 DYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHG 280
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 44.7 bits (105), Expect = 2e-05
Identities = 11/87 (12%), Positives = 36/87 (41%), Gaps = 9/87 (10%)
Query: 25 LKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84
+ I + I +++ D + L ++ L S++ + +++
Sbjct: 1 MGETITVSTPIKQIFPD-----DAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNS 53
Query: 85 NLSGKIPKSLEALSNLKELNVSYNRLE 111
++ + + ++ L N+ +L ++ N+L
Sbjct: 54 DIK-SV-QGIQYLPNVTKLFLNGNKLT 78
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 2e-09
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 1 LEYILQINLFSNSL-SGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLA 58
L + I + N L + LK L L +S +L IP + + L L L
Sbjct: 146 LRNMNCIEMGGNPLENSGFEPGAFDGLK-LNYLRISEAKL-TGIPKDL--PETLNELHLD 201
Query: 59 GNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117
N+ Q +I + L L L N + SL L L+EL++ N+L +P
Sbjct: 202 HNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259
Query: 118 VP 119
+P
Sbjct: 260 LP 261
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 4e-08
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 16/128 (12%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQ 63
+++L N + ++ L L L N++ I ++S L L L L N+
Sbjct: 197 ELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQI-RMIENGSLSFLPTLRELHLDNNKLS 254
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIP-------KSLEALSNLKELNVSYNRLEGEIPT 116
+P L L+ + L +NN++ K+ + +++ N +
Sbjct: 255 -RVPAGLPDLKLLQVVYLHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVP---YW 309
Query: 117 NVPFGNFS 124
V F
Sbjct: 310 EVQPATFR 317
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 4e-08
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ L +N +S + L+ L L +S N L +IP + L L + NR +
Sbjct: 83 LVLVNNKIS-KIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIR-K 137
Query: 66 IPK-SFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
+PK F L ++ +++ N L + L L +S +L T +P
Sbjct: 138 VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKL-----TGIPKDLP 192
Query: 124 SS 125
+
Sbjct: 193 ET 194
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63
++L +N +S + + L+ L L L N++ S L+ L L+++ N
Sbjct: 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV 115
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYNRLE 111
IP +SL L + N + K+PK L N+ + + N LE
Sbjct: 116 -EIPP--NLPSSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE 160
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+ S L +P IS D T L L N F+ L L L L +N +S
Sbjct: 38 VQCSDLGL-KAVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94
Query: 91 PKSLEALSNLKELNVSYNRLEGEIPTNVP 119
K+ L L++L +S N L EIP N+P
Sbjct: 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP 122
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 56.8 bits (137), Expect = 3e-09
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 7 INLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ + +L+ +P ++ K L LS N + IS L +L L L+ NR + S
Sbjct: 36 VDYSNRNLT-HVPKDLPPRTKAL---SLSQNSISELRMPDISFLSELRVLRLSHNRIR-S 90
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
+ F LE+LD+S N L I +++L+ L++S+N + +P FGN +
Sbjct: 91 LDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLT 146
Query: 125 S 125
Sbjct: 147 K 147
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 55.6 bits (134), Expect = 7e-09
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 15/124 (12%)
Query: 7 INLFSNSLSGSLPS---NIQNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRS 62
+ L N L + +N+ L LD+S+N L T + + + L L+ N
Sbjct: 382 LILQRNGLK-NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNML 440
Query: 63 QGSIPKSFESL-ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFG 121
GS+ F L ++ LDL +N + IPK + L L+ELNV+ N+L +VP G
Sbjct: 441 TGSV---FRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQL-----KSVPDG 491
Query: 122 NFSS 125
F
Sbjct: 492 VFDR 495
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 6e-08
Identities = 16/109 (14%), Positives = 35/109 (32%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
I + + + LK L+ + S ++ L+ + +
Sbjct: 282 NIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDT 341
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
S +S FL+ + N + + + L L+ L + N L+
Sbjct: 342 PFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 4e-07
Identities = 36/207 (17%), Positives = 74/207 (35%), Gaps = 13/207 (6%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
L N + SL ++ + L LD+S NRL I+ + L L L+ N +
Sbjct: 82 RLSHNRIR-SLDFHVFLFNQDLEYLDVSHNRLQN---ISCCPMASLRHLDLSFNDFD-VL 136
Query: 67 PKS--FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFS 124
P F +L L FL LS+ ++ L +++L + + + I +
Sbjct: 137 PVCKEFGNLTKLTFLGLSAAKFR-QLD--LLPVAHLHLSCILLDLVSYHIK-GGETESLQ 192
Query: 125 SQSFISNYALCAHQDSKRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKV 184
+ + L H +S + +++ + + FL E +
Sbjct: 193 IPNTTVLH-LVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTL 251
Query: 185 FNLQLERAFRSFDSKCEVHKNVRHRNL 211
N+ L+ ++ ++ + R +
Sbjct: 252 LNVTLQHIETTWKCSVKLFQFFWPRPV 278
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 1e-04
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+ +N ++ + +++ VL +LS N L G + + + L L NR
Sbjct: 408 LDVSLNSLNSHAYDRTCAWAESILVL---NLSSNMLTGSVFRCLP--PKVKVLDLHNNRI 462
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYN 108
SIPK L +L+ L+++SN L +P + L++L+ + + N
Sbjct: 463 M-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 42.6 bits (100), Expect = 1e-04
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
NL SN L+GS+ + +KVL DL NR+ IP ++ L+ L L +A N+ + S+
Sbjct: 434 NLSSNMLTGSVFRCLPPKVKVL---DLHNNRI-MSIPKDVTHLQALQELNVASNQLK-SV 488
Query: 67 PK-SFESLASLEFLDLSSNN 85
P F+ L SL+++ L N
Sbjct: 489 PDGVFDRLTSLQYIWLHDNP 508
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 56.9 bits (137), Expect = 3e-09
Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 23/150 (15%)
Query: 161 LGTESLGSVYK--WIFLD-ETNVAIKVF-NLQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
LG + GSV + + + +VAIKV + + ++ + + ++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-- 401
Query: 217 TIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPM 263
I + + L + G ++ +++ +YL
Sbjct: 402 -IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---F 457
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
VH +L N LL A +SDF +SK LG
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALG 487
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 4e-09
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 26/163 (15%)
Query: 154 EFNEWHL-----LGTESLGSVYK--WIFLDE---TNVAIKVFNLQLERAFRSFDSKCEVH 203
+F E HL LG + GSV + L + VA+K E R F+ + E+
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
Query: 204 KNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMAL 250
K+++H N++K + L +P G + L +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 251 AFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
EYL R +H DL N L++ + + DF ++K+L
Sbjct: 126 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 165
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 4e-09
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 26/163 (15%)
Query: 154 EFNEWHL-----LGTESLGSVYK--WIFLDE---TNVAIKVFNLQLERAFRSFDSKCEVH 203
+F E HL LG + GSV + L + VA+K E R F+ + E+
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 96
Query: 204 KNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMAL 250
K+++H N++K + L +P G + L +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 251 AFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
EYL R +H DL N L++ + + DF ++K+L
Sbjct: 157 GMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLP 196
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 4e-09
Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 26/153 (16%)
Query: 161 LGTESLGSVYK--WIFLD--ETNVAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK 213
LG S G V + W +VA+K L A F + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 214 ILTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRS 260
+ +++ P + + + P G + +A YL R
Sbjct: 86 L---YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR- 141
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+H DL N LL + + DF + + L
Sbjct: 142 --FIHRDLAARNLLLATRDLVKIGDFGLMRALP 172
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 5e-09
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LG G V+ + T VAIK +F + +V K +RH L+
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLV 242
Query: 213 KILTTIAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHG 258
+ A++ +P Y+ + M G P+ +++ +A Y+
Sbjct: 243 Q---LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 297
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DL+ +N L+ E++V V+DF +++L+
Sbjct: 298 -RMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 5e-09
Identities = 37/167 (22%), Positives = 57/167 (34%), Gaps = 30/167 (17%)
Query: 153 DEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRN 210
+F LG G V++ +D+ N AIK L E A + + + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 211 LIKILTTIAILILKPWYLSSC-------VM---PNGD------------FPER---LNIM 245
+++ S M + ER L+I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 246 IDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ +A A E+LH ++H DLKPSN D V V DF + +
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 5e-09
Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 22/150 (14%)
Query: 176 DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKIL-----------TTIAILIL 223
A+K E R+ + K + H N+++ T A +L
Sbjct: 52 SGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLL 111
Query: 224 KPWY----LSSCVM---PNGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNL 274
L + G L I A +++H + P++H DLK N L
Sbjct: 112 LTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLL 170
Query: 275 LDEDMVAHVSDFNISKLLGVLLPETFTRKK 304
L + DF + + +++ ++
Sbjct: 171 LSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 6e-09
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 25/152 (16%)
Query: 161 LGTESLGSVYK--WIFLD---ETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG+ + G+VYK WI + VAIK +A + + V +V + ++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 215 LTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRST 261
+ I + L + +MP G LN + +A YL R
Sbjct: 83 ---LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR-- 137
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+VH DL N L+ ++DF ++KLLG
Sbjct: 138 -LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 55.7 bits (134), Expect = 7e-09
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LG G V+ + T VAIK +F + +V K +RH L+
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP-EAFLQEAQVMKKLRHEKLV 325
Query: 213 KILTTIAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHG 258
+ A++ +P Y+ + M G P+ +++ +A Y+
Sbjct: 326 Q---LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 380
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DL+ +N L+ E++V V+DF +++L+
Sbjct: 381 -RMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 55.4 bits (133), Expect = 7e-09
Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 227 YLSSCVMPNGDFPE--RLNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHV 283
L S + RL + + + LH +G +VH L+P + +LD+ +
Sbjct: 197 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFL 252
Query: 284 SDFNISKLLG 293
+ F G
Sbjct: 253 TGFEHLVRDG 262
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 7e-09
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 27/151 (17%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNL--IK 213
+G+ V++ L+E AIK NL+ + S+ ++ ++ + I+
Sbjct: 35 QIGSGGSSKVFQ--VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92
Query: 214 ILTTIA-----ILILKPWY----LSSCVMPNGDFPERL--NIMIDMALAFEYLH-HGRST 261
+ ++++ L+S + + +M A +H HG
Sbjct: 93 LYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 147
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+VH DLKP+N L+ + M+ + DF I+ +
Sbjct: 148 -IVHSDLKPANFLIVDGML-KLIDFGIANQM 176
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 1e-08
Identities = 27/154 (17%), Positives = 56/154 (36%), Gaps = 28/154 (18%)
Query: 160 LLGTESLGSVYKW--IFLDETNVAIKVFNLQLERAFRS-FDSKCEVHKNVRHRNLIKILT 216
+ LG +Y ++ V +K + ++ ++ + V H ++++I
Sbjct: 87 CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFN 146
Query: 217 TI---AILILKPWYLSSCVM-----------PNGDFP--ERLNIMIDMALAFEYLH-HGR 259
+ Y+ VM P E + ++++ A YLH G
Sbjct: 147 FVEHTDRHGDPVGYI---VMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIG- 202
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+V+ DLKP N +L E+ + + D +
Sbjct: 203 ---LVYNDLKPENIMLTEEQLK-LIDLGAVSRIN 232
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 23/150 (15%)
Query: 161 LGTESLGSVYKWIFL---DETNVAIKVF--NLQLERAFRSFDSKCEVHKNVRHRNLIKIL 215
LG+ + G+V K + VA+K+ ++ V + + + ++++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM- 83
Query: 216 TTIAILILKPWYLSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPM 263
I I + W L + G + ++ +++ +YL
Sbjct: 84 --IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---F 138
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
VH DL N LL A +SDF +SK L
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALR 168
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 1e-08
Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 227 YLSSCVMPNGDFPE--RLNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHV 283
L S + RL + + + LH +G +VH L+P + +LD+ +
Sbjct: 192 VLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG----LVHTYLRPVDIVLDQRGGVFL 247
Query: 284 SDFNISKLLGVLLPETFTR 302
+ F G + + +R
Sbjct: 248 TGFEHLVRDGARVVSSVSR 266
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 1e-08
Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 160 LLGTESLGSVY----KWIFLDETN--VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRN 210
LG G+VY K + +A+KV L+ E + E+ ++RH N
Sbjct: 21 PLGKGKFGNVYLAREK-----QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 211 LIKILTTIA-----ILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHG 258
++++ L+L+ + L + +G F E+ M ++A A Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLE--FAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH-- 131
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
++H D+KP N L+ ++DF S
Sbjct: 132 -ERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 53.2 bits (128), Expect = 2e-08
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 19/122 (15%)
Query: 9 LFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSIP 67
L S L+ + + L L L+L N+L + + L +L TL LA N+ S+P
Sbjct: 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSAGVFDDLTELGTLGLANNQLA-SLP 99
Query: 68 KS-FESLASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNVSYNRLEGEIPTNVPFG 121
F+ L L+ L L N L KSL + L+ LKEL ++ N+L ++P G
Sbjct: 100 LGVFDHLTQLDKLYLGGNQL-----KSLPSGVFDRLTKLKELRLNTNQL-----QSIPAG 149
Query: 122 NF 123
F
Sbjct: 150 AF 151
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 1e-07
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 13/124 (10%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+NL N L +L + + +L L L L+ N+L +P+ + L L L+L GN+ +
Sbjct: 63 WLNLDYNQLQ-TLSAGVFDDLTELGTLGLANNQL-ASLPLGVFDHLTQLDKLYLGGNQLK 120
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNVPFG 121
S+P F+ L L+ L L++N L IP + L+NL+ L++S N+L +VP G
Sbjct: 121 -SLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-----QSVPHG 173
Query: 122 NFSS 125
F
Sbjct: 174 AFDR 177
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 17 SLPSNI----QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFES 72
S+PS I + L DL L T GL LT L L N+ Q F+
Sbjct: 28 SVPSGIPADTEKL------DLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD 81
Query: 73 LASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNVSYNRLEGEIPTNV 118
L L L L++N L SL L+ L +L + N+L+ +P+ V
Sbjct: 82 LTELGTLGLANNQL-----ASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGV 126
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-05
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 8 NLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGS 65
L +N L+ SLP + +L L L L N+L +P + L L L L N+ Q S
Sbjct: 89 GLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQ-S 145
Query: 66 IPKS-FESLASLEFLDLSSNNLSGKIPKSLEALSNLKEL 103
IP F+ L +L+ L LS+N L +P A L +L
Sbjct: 146 IPAGAFDKLTNLQTLSLSTNQLQS-VPHG--AFDRLGKL 181
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 2e-08
Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 27/151 (17%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNL--IK 213
+G+ V++ L+E AIK NL+ + S+ ++ ++ + I+
Sbjct: 16 QIGSGGSSKVFQ--VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 214 ILTTIA-----ILILKPWY----LSSCVMPNGDFPERL--NIMIDMALAFEYLH-HGRST 261
+ ++++ L+S + + +M A +H HG
Sbjct: 74 LYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG--- 128
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+VH DLKP+N L+ + M+ + DF I+ +
Sbjct: 129 -IVHSDLKPANFLIVDGML-KLIDFGIANQM 157
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L+ I ++ F ++ +Q L LIGL+L N++ D+ + L +T L L+GN
Sbjct: 40 LDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQI-TDLA-PLKNLTKITELELSGN 95
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ L S++ LDL+S ++ P L LSNL+ L + N++
Sbjct: 96 --PLKNVSAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQIT 142
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ + L N ++ + ++NL + L+LS N L ++ I+GL+ + TL L
Sbjct: 62 LNNLIGLELKDNQITD--LAPLKNLTKITELELSGNPL-KNVS-AIAGLQSIKTLDLTST 117
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ P L++L+ L L N ++ I L L+NL+ L++ ++
Sbjct: 118 QITDVTP--LAGLSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVS 164
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L I ++ L N L S I L+ + LDL+ ++ D+ ++GL +L L+L N
Sbjct: 84 LTKITELELSGNPLKN--VSAIAGLQSIKTLDLTSTQI-TDVT-PLAGLSNLQVLYLDLN 139
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
Q + L +L++L + + +S + L LS L L N++
Sbjct: 140 --QITNISPLAGLTNLQYLSIGNAQVS-DLT-PLANLSKLTTLKADDNKIS 186
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 7e-07
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++I ++++ +L + L + I + L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGV-TTIEG-VQYLNNLIGLELKDN 73
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
Q + ++L + L+LS N L K ++ L ++K L+++ ++
Sbjct: 74 --QITDLAPLKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQI 119
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++L S ++ + + L L L L +N++ +I ++GL +L L + +
Sbjct: 111 TLDLTSTQITD--VTPLAGLSNLQVLYLDLNQI-TNIS-PLAGLTNLQYLSIGNAQVSDL 166
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
P +L+ L L N +S I L +L NL E+++ N++
Sbjct: 167 TP--LANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQIS 208
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 6e-06
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
L I + + + +T + L +TTL G +I + L +L L
Sbjct: 13 FPDPALANAIKIAAGKSNVTD--TVTQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGL 68
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+L N ++ + L+ L+ + EL +S N L+
Sbjct: 69 ELKDNQIT-DLA-PLKNLTKITELELSGNPLK 98
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 5e-04
Identities = 20/103 (19%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+++ + +S + + NL L L N++ DI ++ L +L + L N Q S
Sbjct: 155 YLSIGNAQVSDL--TPLANLSKLTTLKADDNKI-SDIS-PLASLPNLIEVHLKNN--QIS 208
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYN 108
+ ++L + L++ ++ + + +NL NV
Sbjct: 209 DVSPLANTSNLFIVTLTNQTITN---QPVFYNNNLVVPNVVKG 248
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 2e-08
Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 24/150 (16%)
Query: 161 LGTESLGSVYK--WIFLD--ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKIL 215
+G G V++ ++ + VAIK + F + + H +++K+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 81
Query: 216 TTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTP 262
I ++ P ++ + G+ + ++ A YL R
Sbjct: 82 --IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR--- 136
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH D+ N L+ + + DF +S+ +
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 2e-08
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 25/151 (16%)
Query: 161 LGTESLGSVYK--WIFLD---ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKI 214
LG+ G+V+K WI + V IKV + ++F++ ++ H +++++
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 215 LTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRST 261
L + L + +P G LN + +A YL
Sbjct: 81 L---GLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG-- 135
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
MVH +L N LL V+DF ++ LL
Sbjct: 136 -MVHRNLAARNVLLKSPSQVQVADFGVADLL 165
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 25/152 (16%)
Query: 161 LGTESLGSVYK--WIFLD---ETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG+ + G+VYK WI + VAIK +A + + V +V + ++ ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 215 LTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRST 261
+ I + L + +MP G LN + +A YL R
Sbjct: 83 ---LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR-- 137
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+VH DL N L+ ++DF ++KLLG
Sbjct: 138 -LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 3e-08
Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 26/163 (15%)
Query: 154 EFNEWHL-----LGTESLGSVYK--WIFL---DETNVAIKVFNLQLERAFRSFDSKCEVH 203
F E HL LG + GSV + L VA+K R F + ++
Sbjct: 19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQIL 78
Query: 204 KNVRHRNLIKILTTIAILILKPWYLSSCVMPNG-------------DFPERLNIMIDMAL 250
K + ++K + L +P+G D L +
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 138
Query: 251 AFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
EYL R VH DL N L++ + ++DF ++KLL
Sbjct: 139 GMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLP 178
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 7/118 (5%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+ L L ++PS+ NL + + +SI+ + L +T + + R+
Sbjct: 35 TLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNL 93
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIP--KSLEALSNLKELNVSYNRLEGEIPTNV 118
I + L L+FL + + L P + + L ++ N IP N
Sbjct: 94 TYIDPDALKELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNA 150
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 1e-06
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 8 NLFSNSLSGSLP--SNIQNLKVLIGLDLSINRLYGDIPI-TISGL-KDLTTLFLAGNRSQ 63
+F+ L P + + + + L+++ N IP+ GL + TL L N
Sbjct: 111 GIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSL--EALSNLKELNVSYNRLEGEIPTNVPFG 121
S+ + L+ + L+ N I K S L+VS + +P+
Sbjct: 170 -SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSKG-LE 226
Query: 122 NFSSQSFISNYAL 134
+ + + L
Sbjct: 227 HLKELIARNTWTL 239
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 4e-05
Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 1 LEYILQINLFSNSLSGSLPSNI-QNL-KVLIGLDLSINRLYGDIPI-TISGLKDLTTLFL 57
+ + + N S+P N Q L + L L N + +G K L ++L
Sbjct: 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF-TSVQGYAFNGTK-LDAVYL 186
Query: 58 AGNRSQGSIPK-SFESLAS-LEFLDLSSNNLSGKIPKSLEALSNLKELN 104
N+ I K +F + S LD+S +++ K LE L L N
Sbjct: 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARN 235
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 1e-04
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 47 SGLKDLTTLFLAGNRSQGSIPK-SFESLASLEFLDLSSNNLSGKIP-KSLEALSNLKELN 104
S TL L + +IP +F +L ++ + +S + ++ S LS + +
Sbjct: 28 SLPPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIE 86
Query: 105 VSYNRLEGEIPTNV 118
+ R I +
Sbjct: 87 IRNTRNLTYIDPDA 100
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 4e-08
Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 42/168 (25%)
Query: 161 LGTESLGSVYKWIFLDETN--VAIKVFN----LQLERAFRSFDSKC-----------EVH 203
L + ++ N A+K + + +S + K E+
Sbjct: 39 LNQGKFNKII---LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQ 95
Query: 204 --KNVRHRNLIKILTTIA-------IL-----------ILKPWYLSSCVMPNGDFPERLN 243
++++ + I I + L
Sbjct: 96 IITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKC 155
Query: 244 IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
I+ + +F Y+H+ ++ + H D+KPSN L+D++ +SDF S+
Sbjct: 156 IIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY 201
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 5e-08
Identities = 9/62 (14%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
Query: 240 ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPET 299
+ + L +VH P N + D + D + +G P +
Sbjct: 195 ALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 300 FT 301
Sbjct: 252 SV 253
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 6e-08
Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 23/150 (15%)
Query: 161 LGTESLGSVYK--WIFLD-ETNVAIKVF-NLQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
LG + GSV + + + +VAIKV + + ++ + + ++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-- 75
Query: 217 TIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPM 263
I + + L + G ++ +++ +YL
Sbjct: 76 -IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---F 131
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
VH DL N LL A +SDF +SK LG
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALG 161
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 6e-08
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 22/156 (14%)
Query: 153 DEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRN 210
++ +G + G V+ D T VA+K L F + + K H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 211 LIKILTTIAILILK-PWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLH 256
++++ I + K P Y+ ++ GDF L ++ D A EYL
Sbjct: 174 IVRL---IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 257 HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S +H DL N L+ E V +SDF +S+
Sbjct: 231 ---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 52.5 bits (126), Expect = 6e-08
Identities = 28/149 (18%), Positives = 61/149 (40%), Gaps = 23/149 (15%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNL--IKIL 215
+G+ V++ + + AIK NL+ + S+ ++ ++ + I++
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 216 TTIA-----ILILKPWY----LSSCVMPNGDFPERL--NIMIDMALAFEYLH-HGRSTPM 263
++++ L+S + + +M A +H HG +
Sbjct: 123 DYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG----I 176
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DLKP+N L+ + M+ + DF I+ +
Sbjct: 177 VHSDLKPANFLIVDGML-KLIDFGIANQM 204
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 7e-08
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK 213
LG ++ I +T A K+ L + +H+++ H++++
Sbjct: 47 RFLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 214 ILTTIA-----ILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRST 261
++L+ L E + + L +YLH R
Sbjct: 106 FHGFFEDNDFVFVVLE--LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H DLK N L+ED+ + DF ++ +
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 1e-07
Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 24/150 (16%)
Query: 161 LGTESLGSVYK--WIFLD--ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKIL 215
+G G V++ ++ + VAIK + F + + H +++K+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL- 456
Query: 216 TTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTP 262
I ++ P ++ + G+ + ++ A YL S
Sbjct: 457 --IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKR 511
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH D+ N L+ + + DF +S+ +
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-07
Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 23/151 (15%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK 213
LG ++ I +T A K+ L + +H+++ H++++
Sbjct: 21 RFLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 214 ILTTIA-----ILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRST 261
++L+ L E + + L +YLH R
Sbjct: 80 FHGFFEDNDFVFVVLE--LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H DLK N L+ED+ + DF ++ +
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 1e-07
Identities = 30/148 (20%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
LG G V+ + T VA+K +F ++ + K ++H+ L+++
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLY--- 74
Query: 219 AILILKPWYLSSCVMPNGDFPE----------RLNIMIDMAL----AFEYLHHGRSTPMV 264
A++ +P Y+ + M NG + +N ++DMA ++ +
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 265 HCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H DL+ +N L+ + + ++DF +++L+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI 159
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 31/164 (18%), Positives = 53/164 (32%), Gaps = 27/164 (16%)
Query: 154 EFNEWHL-----LGTESLGSVYK--WIFL---DETNVAIKVF-NLQLERAFRSFDSKCEV 202
F + L LG G V + VA+K + E+
Sbjct: 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEI 76
Query: 203 HKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPERL---------NIMIDMAL--- 250
+N+ H N++K L +P+G E L + A+
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 251 -AFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+YL + VH DL N L++ + + DF ++K +
Sbjct: 137 KGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 2e-07
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 24/150 (16%)
Query: 161 LGTESLGSVYKWIFLD----ETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRNLIKIL 215
LG G VY+ ++ + + NVA+K F S+ + KN+ H +++K+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL- 78
Query: 216 TTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTP 262
I I+ +P ++ + P G+ + + + A YL
Sbjct: 79 --IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN--- 133
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH D+ N L+ + DF +S+ +
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYI 163
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 51.0 bits (122), Expect = 2e-07
Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQ 63
++ L + L +++S N + I S L L + + +
Sbjct: 34 ELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92
Query: 64 GSIPKS-FESLASLEFLDLSSNNLSGKIPK-SLEALSNLKELNVSYNRLEGEIPTNV 118
I F++L +L++L +S+ + +P L++ N I N
Sbjct: 93 LYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNS 148
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 8e-06
Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 5/140 (3%)
Query: 5 LQINLFSNSLSGSLPSN-IQNLKV-LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+ +++ N ++ N L + L L+ N + +G + N
Sbjct: 131 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNL 190
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
+ F + LD+S + LE L L+ + + ++PT
Sbjct: 191 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPTLEKLVA 247
Query: 123 FSSQSFISNYALCAHQDSKR 142
S CA + +R
Sbjct: 248 LMEASLTYPSHCCAFANWRR 267
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 3e-04
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 6/90 (6%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90
+++ +IP + ++ L + + +F LE +++S N++ I
Sbjct: 14 FLCQESKV-TEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 70
Query: 91 PKS-LEALSNLKELNVS-YNRLEGEIPTNV 118
L L E+ + N L I
Sbjct: 71 EADVFSNLPKLHEIRIEKANNLL-YINPEA 99
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 34/178 (19%)
Query: 143 TSYLDILQATDEFNEWHL----------LGTESLGSVYK--WIFLD--ETNVAIKVFNLQ 188
++ D Q EF L +G G V E +VAIK +
Sbjct: 26 HTFEDPTQTVHEF-AKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 84
Query: 189 L-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDF--------- 238
E+ R F + + H N+I++ + KP + + M NG
Sbjct: 85 YTEKQRRDFLGEASIMGQFDHPNIIRLEG--VVTKSKPVMIVTEYMENGSLDSFLRKHDA 142
Query: 239 ----PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ + ++ +A +YL VH DL N L++ ++V VSDF + ++L
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 31/167 (18%)
Query: 152 TDEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN 210
+F E +LG + G V K LD AIK E + S+ + ++ H+
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQY 63
Query: 211 LIKILTTIAILILKPWYLSSC--------VM---PNGD-----------FPER--LNIMI 246
+++ +++ M NG +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR 123
Query: 247 DMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ A Y+H G ++H DLKP N +DE + DF ++K +
Sbjct: 124 QILEALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L I QI ++ + S+ IQ L + L L+ N+L DI ++ LK+L LFL N
Sbjct: 45 LNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFLNGNKL-TDIKP-LANLKNLGWLFLDEN 100
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ + + S + L L+ L L N +S I L L L+ L + N++
Sbjct: 101 KVK-DL-SSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKIT 147
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 2e-06
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
+ NLK L L L N++ D+ ++ LK L +L L N S L LE L
Sbjct: 84 KPLANLKNLGWLFLDENKV-KDLS-SLKDLKKLKSLSLEHN--GISDINGLVHLPQLESL 139
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L +N ++ L L+ L L++ N++
Sbjct: 140 YLGNNKIT--DITVLSRLTKLDTLSLEDNQIS 169
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 2e-05
Identities = 16/92 (17%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
+ I +L + + + L + + + + + L ++ L
Sbjct: 18 FSDDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNS--DIKSVQGIQYLPNVTKL 73
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L+ N L+ I K L L NL L + N+++
Sbjct: 74 FLNGNKLT-DI-KPLANLKNLGWLFLDENKVK 103
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ L +N ++ + + L L L L N++ DI ++GL L L+L+ N S
Sbjct: 138 SLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLYLSKN--HIS 191
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
++ L +L+ L+L S K L + + L
Sbjct: 192 DLRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL 236
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 2e-07
Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 28/165 (16%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL- 215
+G S G V++ T A+K L+ + + ++ +
Sbjct: 64 PRVGRGSFGEVHRMKDKQ-TGFQCAVKKVRLE-----VFRVEELVACAGLSSPRIVPLYG 117
Query: 216 -----TTIAILILKPWY-----LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRSTPM 263
+ I ++ L + G PE + EYLH + +
Sbjct: 118 AVREGPWVNI-FME--LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRI 171
Query: 264 VHCDLKPSNNLLDED-MVAHVSDFNISKLLGVLLPETFTRKKPTI 307
+H D+K N LL D A + DF + L I
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYI 216
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 32/151 (21%)
Query: 159 HLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213
++G G VY LD + + A+K N F ++ + K+ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 214 IL-----TTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYL 255
+L + + L++ P+ M +GD + + + +A +YL
Sbjct: 91 LLGICLRSEGSPLVVLPY------MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
S VH DL N +LDE V+DF
Sbjct: 145 A---SKKFVHRDLAARNCMLDEKFTVKVADF 172
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 3e-07
Identities = 37/178 (20%), Positives = 64/178 (35%), Gaps = 34/178 (19%)
Query: 143 TSYLDILQATDEFNEWHL----------LGTESLGSVYK--WIFLD--ETNVAIKVFNL- 187
+Y + +A F + +G+ G V + VAIK
Sbjct: 30 HTYEEPGRAGRSF-TREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG 88
Query: 188 QLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD---------- 237
ER R F S+ + H N+I++ + + + + M NG
Sbjct: 89 YTERQRRDFLSEASIMGQFDHPNIIRLEG--VVTRGRLAMIVTEYMENGSLDTFLRTHDG 146
Query: 238 ---FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ + ++ + YL VH DL N L+D ++V VSDF +S++L
Sbjct: 147 QFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 3e-07
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 159 HLLGTESLGSVYKWIFLDETN--VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK 213
+LLG S VY+ + T VAIK+ + + + ++ ++H ++H ++++
Sbjct: 17 NLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILE 75
Query: 214 ILTTIA-----ILILKPWYLSS------CVMPNGDFPERL--NIMIDMALAFEYLHHGRS 260
+ L+L+ + F E + M + YLH S
Sbjct: 76 LYNYFEDSNYVYLVLE--MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---S 130
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDF 286
++H DL SN LL +M ++DF
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADF 156
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 3e-07
Identities = 34/176 (19%), Positives = 61/176 (34%), Gaps = 29/176 (16%)
Query: 137 HQDSKRTSYLDILQATDEFNEWHLL-----GTESLGSVYKWIFLDETN--VAIKVFNLQL 189
H + + + E + LL G E L +V + T V ++ NL+
Sbjct: 6 HHHMENLYFQGMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEA 64
Query: 190 ERAFRSFDSKCEVH--KNVRHRNLIKILTTIAILILKPW----YLS--SC-----VMPNG 236
+ E+H K H N++ T I + W +++ S
Sbjct: 65 CSNEMVTFLQGELHVSKLFNHPNIVPYRATF-IADNELWVVTSFMAYGSAKDLICTHFMD 123
Query: 237 DFPERL--NIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
E I+ + A +Y+H G VH +K S+ L+ D ++S +
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMGY----VHRSVKASHILISVDGKVYLSGLRSN 175
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 5e-07
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSI 66
L N ++ P +L L L L N+L G +P+ + L LT L L N+
Sbjct: 46 YLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVLP 104
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
F+ L L+ L + N L+ ++P+ +E L++L L + N+L+ ++P G F
Sbjct: 105 SAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-----SIPHGAF 155
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 9e-06
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKS-FESLASLEFLDLSSNNLSGK 89
L L N++ P L +L L+L N+ ++P F+SL L LDL +N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQL--- 100
Query: 90 IPKSLEA-----LSNLKELNVSYNRLEGEIPTNV 118
L + L +LKEL + N+L E+P +
Sbjct: 101 --TVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI 131
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 6e-07
Identities = 33/151 (21%), Positives = 59/151 (39%), Gaps = 32/151 (21%)
Query: 159 HLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213
++G G VY LD + + A+K N F ++ + K+ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 214 IL-----TTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYL 255
+L + + L++ P+ M +GD + + + +A ++L
Sbjct: 155 LLGICLRSEGSPLVVLPY------MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
S VH DL N +LDE V+DF
Sbjct: 209 A---SKKFVHRDLAARNCMLDEKFTVKVADF 236
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 7e-07
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 11/118 (9%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ NL S++ + L + + + + + I L ++ L L GN+
Sbjct: 23 KANLKKKSVT-DAVTQN-ELNSIDQIIANNSDIKSVQGIQY--LPNVRYLALGGNKLH-D 77
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
I + + L +L +L L+ N L + L+NLKEL + N+L ++P G F
Sbjct: 78 IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQL-----QSLPDGVF 129
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 6 QINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQ 63
+ L N L SLP+ + L L L L N+L +P + L +LT L LA N+ Q
Sbjct: 89 YLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQL-QSLPDGVFDKLTNLTYLNLAHNQLQ 146
Query: 64 GSIPKSFESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNVPFGN 122
F+ L +L LDLS N L +P+ + + L+ LK+L + N+L +VP G
Sbjct: 147 SLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL-----KSVPDGV 200
Query: 123 F 123
F
Sbjct: 201 F 201
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 8e-07
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ +A +YL + ++H D+KP N LLDE H++DFNI+ +L
Sbjct: 124 LVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 8e-07
Identities = 34/149 (22%), Positives = 58/149 (38%), Gaps = 23/149 (15%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVF--NLQLERAFRSFDSKCEVHKNVRHRNLIKILT 216
+G+ G V+ +L++ VAIK E F + EV + H L+++
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYG 70
Query: 217 TIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPM 263
L P L + M +G L + +D+ YL +
Sbjct: 71 --VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACV 125
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E+ V VSDF +++ +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFV 154
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 8e-07
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 18 LPSNIQNLKVLIGLDLSINRLYGDIPIT----ISGLKDLTTLFLAGNRSQGSIPKSFESL 73
+ + + LK L LS N I +SG+++L L L N + I
Sbjct: 40 MDATLSTLKACKHLALSTNN------IEKISSLSGMENLRILSLGRNLIK-KIENLDAVA 92
Query: 74 ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+LE L +S N ++ + +E L NL+ L +S N++
Sbjct: 93 DTLEELWISYNQIA-SL-SGIEKLVNLRVLYMSNNKIT 128
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 3e-06
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGL----KDLTTLFLAGNRSQGSIPKSFESLAS 75
S++ ++ L L L N + I L L L+++ N+ S+ E L +
Sbjct: 64 SSLSGMENLRILSLGRNLIK-----KIENLDAVADTLEELWISYNQIA-SL-SGIEKLVN 116
Query: 76 LEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGN 122
L L +S+N ++ L AL L++L ++ N L + N
Sbjct: 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 1e-06
Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 29/164 (17%)
Query: 154 EFNEWHL-----LGTESLGSVYK--WIFLDE---TNVAIKVFNLQ---LERAFRSFDSKC 200
F++ +L LG G V + ++ VA+K L+ + + +
Sbjct: 27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--LKADAGPQHRSGWKQEI 84
Query: 201 EVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD-----------FPERLNIMIDMA 249
++ + + H ++IK L +P G + L +
Sbjct: 85 DILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC 144
Query: 250 LAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
YLH +H DL N LLD D + + DF ++K +
Sbjct: 145 EGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 1e-06
Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 19/159 (11%)
Query: 160 LLGTESLGSVYKWIFLDE-TNVAIKVFNLQLERAFRSFDSKCEVH--KNVRHRNLIKILT 216
+G S +VYK + + VA + K E K ++H N+++
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 217 TIAILILKPWY------------LSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRSTP 262
+ + L + + ++ + + ++LH R+ P
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH-TRTPP 151
Query: 263 MVHCDLKPSNNLLD-EDMVAHVSDFNISKLLGVLLPETF 300
++H DLK N + + D ++ L +
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 190
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 19/147 (12%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
LGT G V + + +VAIK+ + F + +V N+ H L+++
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYG-- 86
Query: 219 AILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVH 265
+P ++ + M NG + L + D+ A EYL S +H
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLH 143
Query: 266 CDLKPSNNLLDEDMVAHVSDFNISKLL 292
DL N L+++ V VSDF +S+ +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYV 170
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 1e-06
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 239 PER-LNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
P R + I+ + A + H G H D+KP N L+ D A++ DF I+
Sbjct: 133 PPRAVAIVRQIGSALDAAHAAG----ATHRDVKPENILVSADDFAYLVDFGIASATT 185
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + N ++++ SL + +Q L L LS N++ D+ + L L L + N
Sbjct: 40 LSGVQNFNGDNSNIQ-SL-AGMQFFTNLKELHLSHNQI-SDLS-PLKDLTKLEELSVNRN 95
Query: 61 RSQGSIPK-SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
R + + A L L L +N L SL L NL+ L++ N+L+
Sbjct: 96 R----LKNLNGIPSACLSRLFLDNNELRD--TDSLIHLKNLEILSIRNNKLK 141
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 3e-06
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 6/92 (6%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79
L + +L + D+ + L + + + +L+ L
Sbjct: 13 FPDPGLANAVKQNLGKQSV-TDLV-SQKELSGVQNFNGDNS--NIQSLAGMQFFTNLKEL 68
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
LS N +S + L+ L+ L+EL+V+ NRL+
Sbjct: 69 HLSHNQIS-DL-SPLKDLTKLEELSVNRNRLK 98
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 4e-06
Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L ++ NL S++ + + L + + + + + + +L L L+ N
Sbjct: 18 LANAVKQNLGKQSVTD--LVSQKELSGVQNFNGDNSNI-QSLA-GMQFFTNLKELHLSHN 73
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALS--NLKELNVSYNRLE 111
Q S + L LE L ++ N L +L + L L + N L
Sbjct: 74 --QISDLSPLKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLDNNELR 119
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 2e-06
Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 19/147 (12%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
LG+ G V + + +VA+K+ + + F + + + H L+K
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYG-- 70
Query: 219 AILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVH 265
P Y+ + + NG + L + D+ +L S +H
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIH 127
Query: 266 CDLKPSNNLLDEDMVAHVSDFNISKLL 292
DL N L+D D+ VSDF +++ +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYV 154
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 2e-06
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 17 SLPSNI----QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFES 72
LP I L L N+ +P +S K LT + L+ NR +SF +
Sbjct: 24 VLPKGIPRDVTEL------YLDGNQF-TLVPKELSNYKHLTLIDLSNNRISTLSNQSFSN 76
Query: 73 LASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132
+ L L LS N L P++ + L +L+ L++ N + VP G F+ S +S+
Sbjct: 77 MTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDIS-----VVPEGAFNDLSALSHL 131
Query: 133 AL 134
A+
Sbjct: 132 AI 133
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 47.6 bits (112), Expect = 2e-06
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Query: 11 SNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-------SGLKDLTTLFLAGNRSQ 63
+ + L S++ NL+ L+ L + + D + + +L L + Q
Sbjct: 207 DSVVEDILGSDLPNLEKLV-LYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQ 265
Query: 64 GSIPKSF---ESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGE 113
+ + F + L LE +D+S+ L+ + + ++ + +LK +N+ YN L E
Sbjct: 266 NVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 2e-06
Identities = 24/120 (20%), Positives = 37/120 (30%), Gaps = 16/120 (13%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+N +N L+ S L L + + N L I +S LT L N+
Sbjct: 110 YLNCDTNKLTKLDVSQNPLLTYL---NCARNTLT---EIDVSHNTQLTELDCHLNKKITK 163
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ L LD S N ++ + L LN N + T +
Sbjct: 164 LD--VTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNI-----TKLDLNQNIQ 213
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 16/120 (13%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ SN L+ +L + L L L+ N+L + +S LT L A N
Sbjct: 89 YLACDSNKLT-NLD--VTPLTKLTYLNCDTNKL---TKLDVSQNPLLTYLNCARNTLT-E 141
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
I L LD N K+ + + L L+ S+N++ T +
Sbjct: 142 ID--VSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKI-----TELDVSQNKL 192
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 6e-06
Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + ++ ++S++ + I+ L L L + N + + +S +LT L N
Sbjct: 41 LATLTSLDCHNSSIT-DMT-GIEKLTGLTKLICTSNNITT---LDLSQNTNLTYLACDSN 95
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPF 120
+ ++ L L +L+ +N L+ K+ S L LN + N L T +
Sbjct: 96 KLT-NLD--VTPLTKLTYLNCDTNKLT-KLDVSQ--NPLLTYLNCARNTL-----TEIDV 144
Query: 121 GNFSS 125
+ +
Sbjct: 145 SHNTQ 149
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
+ + + + + L L LD + + D+ I L LT L N +
Sbjct: 22 SEVAAAFEMQATDTISEEQLATLTSLDCHNSSI-TDMT-GIEKLTGLTKLICTSNNIT-T 78
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
+ +L +L SN L+ + + L+ L LN N+L T +
Sbjct: 79 LD--LSQNTNLTYLACDSNKLT-NLD--VTPLTKLTYLNCDTNKL-----TKLDVSQNPL 128
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ N ++ ++ K+L L+ N + + ++ LT L + N+
Sbjct: 174 TLDCSFNKITEL---DVSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT-E 226
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
I L L + D S N L+ ++ S LS L L+ L
Sbjct: 227 ID--VTPLTQLTYFDCSVNPLT-ELDVS--TLSKLTTLHCIQTDLL 267
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 16/120 (13%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ SN L+ + + L L D S+N L + +S L LTTL
Sbjct: 216 FLDCSSNKLT-EID--VTPLTQLTYFDCSVNPL---TELDVSTLSKLTTLHCIQTDLL-E 268
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
I + L + ++ + + L L+ + T +
Sbjct: 269 IDLT--HNTQLIYFQAEGCRKIKELD--VTHNTQLYLLDCQAAGI-----TELDLSQNPK 319
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 11/106 (10%), Positives = 30/106 (28%), Gaps = 11/106 (10%)
Query: 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS 65
++ L ++ L + ++ L L
Sbjct: 258 TLHCIQTDLLEIDLTHNTQLI-----YFQAEGCRKIKELDVTHNTQLYLLDCQAAGIT-E 311
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ L +L L++ L+ ++ + + LK L+ ++
Sbjct: 312 LD--LSQNPKLVYLYLNNTELT-ELD--VSHNTKLKSLSCVNAHIQ 352
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 4e-04
Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 52 LTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
+ A Q + S E LA+L LD +++++ +E L+ L +L + N +
Sbjct: 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD--MTGIEKLTGLTKLICTSNNI- 76
Query: 112 GEIPTNVPFGNFSS 125
T + ++
Sbjct: 77 ----TTLDLSQNTN 86
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 39/182 (21%)
Query: 147 DILQATDEFNEWH---LLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCE 201
D+L+ E++E +LG + G VY L +AIK + R + +
Sbjct: 13 DLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLS-NQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 202 VHKNVRHRNLIKIL------TTIAIL-----------ILKPWYLSSCVMPNGDFP--ERL 242
+HK+++H+N+++ L I I +L+ + G E+
Sbjct: 72 LHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKW--------GPLKDNEQT 123
Query: 243 --NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLLGVLLPET 299
+ +YLH + +VH D+K N L++ V +SDF SK L + P T
Sbjct: 124 IGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180
Query: 300 FT 301
T
Sbjct: 181 ET 182
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 2e-06
Identities = 36/155 (23%), Positives = 58/155 (37%), Gaps = 30/155 (19%)
Query: 159 HLLGTESLGSVYK--WIFLD--ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLI 212
+LG GSV + D VA+K L +R F S+ K+ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 213 KIL---------TTIAILILKPW--------YLSSCVMPNGDFPERLNIMIDMAL----A 251
++L +++ P+ YL + G L ++ +
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 252 FEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
EYL + +H DL N +L +DM V+DF
Sbjct: 160 MEYLS---NRNFLHRDLAARNCMLRDDMTVCVADF 191
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 3e-06
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 237 DFPERLNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+N + ++ H +VH D+KP N L+D + + DF I+K L
Sbjct: 109 SVDTAINFTNQILDGIKHAHDMR----IVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-06
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 11 SNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSF 70
S S G L + L L L I + L L L L+ NR G +
Sbjct: 27 SRSNEGKLEGLTDEFEELEFLSTINVGL-TSIAN-LPKLNKLKKLELSDNRVSGGLEVLA 84
Query: 71 ESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYN 108
E +L L+LS N + + L+ L NLK L++
Sbjct: 85 EKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 5e-05
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 49 LKDLTTLFLAGNRSQ-GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSY 107
D+ L L +RS G + + LEFL + L+ I +L L+ LK+L +S
Sbjct: 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT-SI-ANLPKLNKLKKLELSD 73
Query: 108 NRLEGEIP 115
NR+ G +
Sbjct: 74 NRVSGGLE 81
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 1e-04
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 21 NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLEF 78
++K L+ LD S + G + ++L L + + L L+
Sbjct: 15 TPSDVKELV-LDNSRSNE-GKLEGLTDEFEELEFLSTINV----GLTSIANLPKLNKLKK 68
Query: 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L+LS N +SG + E NL LN+S N+++
Sbjct: 69 LELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 47.3 bits (112), Expect = 3e-06
Identities = 29/164 (17%), Positives = 48/164 (29%), Gaps = 28/164 (17%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFLDETN------VAIKVFNLQLERAFRSFDSKCEVHKN 205
+ HLLG + VY+ D + +KV F E K
Sbjct: 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKP 123
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGDFPERLN-----------------IMIDM 248
+K + A L L + G +N + M
Sbjct: 124 SMQHMFMKFYS--AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRM 181
Query: 249 ALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
E +H ++H D+KP N +L + + ++S L
Sbjct: 182 LYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 47.5 bits (113), Expect = 3e-06
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
+ H LG G VY+ ++ VA+K F + V K ++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNL 278
Query: 212 IKILTTIAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHH 257
+++L P+Y+ + M G+ L + ++ A EYL
Sbjct: 279 VQLLG--VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE- 335
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H +L N L+ E+ + V+DF +S+L+
Sbjct: 336 --KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 31/154 (20%)
Query: 161 LGTESLGSVYK--WIFLD--ETNVAIKVF--NLQLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG GSV + D VA+K+ ++ F + K H ++ K+
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 215 L----------TTIAILILKPW--------YLSSCVMPNGDFPERLNIMIDMAL----AF 252
+ +++ P+ +L + + F L ++ +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 253 EYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
EYL S +H DL N +L EDM V+DF
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADF 181
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 3e-06
Identities = 31/149 (20%), Positives = 56/149 (37%), Gaps = 32/149 (21%)
Query: 161 LGTESLGSVYKWIFLD----ETNVAIKVFN-LQLERAFRSFDSKCEVHKNVRHRNLIKIL 215
+G G VY ++D AIK + + + +F + + + + H N++ ++
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 216 -----TTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHH 257
+L P+ M +GD + ++ + +A EYL
Sbjct: 89 GIMLPPEGLPHVLLPY------MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA- 141
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
VH DL N +LDE V+DF
Sbjct: 142 --EQKFVHRDLAARNCMLDESFTVKVADF 168
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 4e-06
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 237 DFPERLNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
+ ++ D A + H +G ++H D+KP+N ++ V DF I++
Sbjct: 114 TPKRAIEVIADACQALNFSHQNG----IIHRDVKPANIMISATNAVKVMDFGIAR 164
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 47.1 bits (112), Expect = 4e-06
Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 46/169 (27%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQ-LERAFRSFDSKCEV---HKNVRHRNLIKIL 215
+LG S G+V VA+K + + A E+ ++ H N+I+
Sbjct: 22 ILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALM------EIKLLTESDDHPNVIRYY 75
Query: 216 TT--------IAI---------LILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLH-H 257
+ IA+ L+ + + ++++ +A +LH
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKE-YNPISLLRQIASGVAHLHSL 134
Query: 258 GRSTPMVHCDLKPSNNLLD-------------EDMVAHVSDFNISKLLG 293
++H DLKP N L+ E++ +SDF + K L
Sbjct: 135 K----IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 46.6 bits (111), Expect = 5e-06
Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 35/190 (18%)
Query: 143 TSYLDILQATDEFNEWHL----------LGTESLGSVYK--WIFLD---ETNVAIKVFNL 187
D QA +F + +G G VYK E VAIK
Sbjct: 25 AMGSDPNQAVLKF-TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA 83
Query: 188 QL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGD--------- 237
E+ F + + H N+I++ I KP + + M NG
Sbjct: 84 GYTEKQRVDFLGEAGIMGQFSHHNIIRLEG--VISKYKPMMIITEYMENGALDKFLREKD 141
Query: 238 ----FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+ + ++ +A +YL + VH DL N L++ ++V VSDF +S++L
Sbjct: 142 GEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198
Query: 294 VLLPETFTRK 303
T+T
Sbjct: 199 DDPEATYTTS 208
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 5e-06
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 223 LKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAH 282
LK W C + + + L+I I +A A E+LH ++H DLKPSN D V
Sbjct: 148 LKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVK 204
Query: 283 VSDFNISKLL 292
V DF + +
Sbjct: 205 VGDFGLVTAM 214
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 20/105 (19%)
Query: 202 VHKNVRHRNLIKILTTIAILILKPWYLSSCVM------------PNGDFPERL--NIMID 247
+ K + H N++K++ + Y+ V E D
Sbjct: 89 ILKKLDHPNVVKLVEVLDDPNEDHLYM---VFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ EYLH+ + ++H D+KPSN L+ ED ++DF +S
Sbjct: 146 LIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 6e-06
Identities = 36/165 (21%), Positives = 59/165 (35%), Gaps = 42/165 (25%)
Query: 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQ-LERAFRSFDSKCEV---HKNVRHR 209
F +LG + G++ D +VA+K + A R EV ++ H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADR------EVQLLRESDEHP 78
Query: 210 NLIKILTT--------IAI---------LILKPWYLSSCVMPNGDFPERLNIMIDMALAF 252
N+I+ T IAI + + + E + ++
Sbjct: 79 NVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHL-------GLEPITLLQQTTSGL 131
Query: 253 EYLHHGRSTPMVHCDLKPSNNLLDE-----DMVAHVSDFNISKLL 292
+LH +VH DLKP N L+ + A +SDF + K L
Sbjct: 132 AHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 7e-06
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSI 66
+L +NSL L L L L N+L +P + + L LT L L+ N+ Q
Sbjct: 34 DLETNSLKSLPNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQLQSLP 92
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNVPFGNF 123
F+ L L+ L L++N L +P + + L+ LK+L + N+L+ +VP G F
Sbjct: 93 NGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-----SVPDGVF 144
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 8e-06
Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 42/141 (29%)
Query: 178 TNVAIKVFN------------LQLERAFRSFDSKCEVH--KNVRHRNLIKILTTIA---- 219
V +K +L + E+ V H N+IK+L
Sbjct: 50 KEVVVKFIKKEKVLEDCWIEDPKLGKVTL------EIAILSRVEHANIIKVLDIFENQGF 103
Query: 220 -ILILKPW--------YLSSCVMPNGDFPERL--NIMIDMALAFEYLHHGRSTPMVHCDL 268
L+++ ++ + E L I + A YL ++H D+
Sbjct: 104 FQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDI 156
Query: 269 KPSNNLLDEDMVAHVSDFNIS 289
K N ++ ED + DF +
Sbjct: 157 KDENIVIAEDFTIKLIDFGSA 177
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 8e-06
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 17 SLPSNI-QNLKVLIGLDLSINRLYGDIPITI-SGLKDLTTLFLAGNRSQGSIPKSFESLA 74
+P +I + L L+ N L + L L L L N+ G P +FE +
Sbjct: 22 EIPRDIPLHTTEL---LLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGAS 78
Query: 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF 123
++ L L N + K L LK LN+ N++ + V G+F
Sbjct: 79 HIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI-----SCVMPGSF 122
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 1e-05
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 236 GDFPER--LNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
E+ IM + LH +VH DLKP N LLD+DM ++DF S L
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLN----IVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 293 G 293
Sbjct: 175 D 175
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-05
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Query: 13 SLSGSLPSNIQNLKV----LIGLDLSINRLYGDIPIT-ISGLKDLTTLFLAGNRSQGSIP 67
L G I+NL +D S N + + L+ L TL + NR
Sbjct: 25 DLRGYKIPVIENLGATLDQFDAIDFSDNEI---RKLDGFPLLRRLKTLLVNNNRICRIGE 81
Query: 68 KSFESLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYN 108
++L L L L++N+L L +L +L L + N
Sbjct: 82 GLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 123
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 1e-05
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Query: 20 SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLE 77
+ N LDL ++ I + L + + N I K F L L+
Sbjct: 13 AQYTNAVRDRELDLRGYKI-PVIENLGATLDQFDAIDFSDN----EIRKLDGFPLLRRLK 67
Query: 78 FLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L +++N + +AL +L EL ++ N L
Sbjct: 68 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLV 101
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 28/142 (19%)
Query: 180 VAIKVFNLQLERAFRSFDSKC--EVH--KNVRHRNLIKILTTIAILILKPWYLSSCVM-- 233
A+K+ + R + ++ E+ + +RH+N+I+++ + + Y+ VM
Sbjct: 33 RAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM---VMEY 89
Query: 234 ------------PNGDFPER--LNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDED 278
P FP + EYLH G +VH D+KP N LL
Sbjct: 90 CVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG----IVHKDIKPGNLLLTTG 145
Query: 279 MVAHVSDFNISKLLGVLLPETF 300
+S +++ L +
Sbjct: 146 GTLKISALGVAEALHPFAADDT 167
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 21/149 (14%)
Query: 159 HLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTT 217
H LG G VY+ ++ VA+K F + V K ++H NL+++L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLG- 76
Query: 218 IAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHGRSTPM 263
P+Y+ + M G+ L + ++ A EYL
Sbjct: 77 -VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 132
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E+ + V+DF +S+L+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM 161
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-05
Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 33/163 (20%)
Query: 152 TDEFNEWHLLGTESLGSVYKWI-FLDETNVAIKVFNLQLERAFRSFDSKCEVH---KNVR 207
T EF+E +G+ GSV+K + LD AIK L + ++ EV+ +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 208 HRNLIK------------ILT------TIAILILKPWYLSSCVMPNGDFPER--LNIMID 247
H ++++ I ++A I + F E ++++
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE------NYRIMSYFKEAELKDLLLQ 123
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
+ Y+H +VH D+KPSN + + + + +
Sbjct: 124 VGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDE 163
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 2e-05
Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 52/142 (36%)
Query: 180 VAIKVFNLQ-----LERAFRSFDSKCEVHKNVRHRNLIK----ILTTIAILILKPWYLSS 230
VA+K+ +++ E + + ++K + H N++K YL
Sbjct: 35 VAVKIVDMKRAVDCPENIKK----EICINKMLNHENVVKFYGHRREGNIQ------YL-- 82
Query: 231 CVM-------------PNGDFPERLNIMIDMALAF--------EYLHHGRSTPMVHCDLK 269
+ P+ PE A F YLH + H D+K
Sbjct: 83 -FLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQLMAGVVYLH---GIGITHRDIK 132
Query: 270 PSNNLLDEDMVAHVSDFNISKL 291
P N LLDE +SDF ++ +
Sbjct: 133 PENLLLDERDNLKISDFGLATV 154
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 54/143 (37%)
Query: 180 VAIKVFNLQ-----LERAFRSFDSKCEVHKNVRHRNLIK----ILTTIAILILKPWYLSS 230
VA+K+ +++ E + + ++K + H N++K YL
Sbjct: 35 VAVKIVDMKRAVDCPENIKK----EICINKMLNHENVVKFYGHRREGNIQ------YL-- 82
Query: 231 CVM-------------PNGDFPERLNIMIDMALAF--------EYLH-HGRSTPMVHCDL 268
+ P+ PE A F YLH G + H D+
Sbjct: 83 -FLEYCSGGELFDRIEPDIGMPE------PDAQRFFHQLMAGVVYLHGIG----ITHRDI 131
Query: 269 KPSNNLLDEDMVAHVSDFNISKL 291
KP N LLDE +SDF ++ +
Sbjct: 132 KPENLLLDERDNLKISDFGLATV 154
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 3e-05
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFT 301
+ A EYLH ++H DLKP N LL+EDM ++DF +K+L +
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 189
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 43.9 bits (104), Expect = 3e-05
Identities = 26/150 (17%), Positives = 62/150 (41%), Gaps = 17/150 (11%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCEVHKNVRHR 209
+ + +G S G V + VA+K+ +L+ ++ ++ + ++ +H
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102
Query: 210 NLIKILTTIAILILKPW----YLS--SC--VMPNGDFPERL--NIMIDMALAFEYLHHGR 259
N++++ + ++ + W +L + ++ E + + A YLH
Sbjct: 103 NVVEMYKSY-LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH--- 158
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
+ ++H D+K + LL D +SDF
Sbjct: 159 AQGVIHRDIKSDSILLTLDGRVKLSDFGFC 188
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 34/150 (22%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCEVHKNVRHR 209
++ + +G + G+VY + + T VAI+ NLQ + ++ V + ++
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDV-ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 210 NLIKILTTIAILILKPW----YLS--SC--VMPNGDFPERL--NIMIDMALAFEYLHHGR 259
N++ L + ++ + W YL+ S V+ E + + A E+LH
Sbjct: 78 NIVNYLDSY-LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH--- 133
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
S ++H D+K N LL D ++DF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 37/135 (27%)
Query: 178 TNVAIKVFN------LQLERAFRSFDSKCEVH--KNVRHRNLIKILTTIAILILKPWYLS 229
VAIK+ + L++ FR EV K + H N++K+ I K YL
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFR------EVRIMKILNHPNIVKLFEVIETE--KTLYL- 91
Query: 230 SCVM---PNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNL 274
+M G+ E + + A +Y H R +VH DLK N L
Sbjct: 92 --IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLL 146
Query: 275 LDEDMVAHVSDFNIS 289
LD DM ++DF S
Sbjct: 147 LDADMNIKIADFGFS 161
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 6e-05
Identities = 52/313 (16%), Positives = 98/313 (31%), Gaps = 87/313 (27%)
Query: 36 NRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESL-ASLEFLDLSSNNL-------S 87
+RLY D + F N S+ + + L +L L + N+ S
Sbjct: 117 DRLYNDNQV-----------FAKYNVSR---LQPYLKLRQALLELR-PAKNVLIDGVLGS 161
Query: 88 GKIPKSLEALSNLKELNVSYNRLEGEIPTNV---PFGNFSSQSFISNY--ALCAHQDSKR 142
GK +L+ + K ++ ++ + N +S + L D
Sbjct: 162 GKTWVALDVCLSYK--------VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 143 TSYLDILQA----TDEFNEW--HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSF 196
TS D LL ++ + + L NV +A+ +F
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL--LVLL--NVQNA-------KAWNAF 262
Query: 197 DSKCEVHKNVRHRNLIKIL----TTIAILILKPW---------YLSSCV-MPNGDFPERL 242
+ C++ R + + L TT L L + D P +
Sbjct: 263 NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREV 322
Query: 243 NIMIDMALAF--EYLHHGRST----PMVHCD-----LKPSNNLLD--------EDMVAHV 283
L+ E + G +T V+CD ++ S N+L+ + +
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 284 SDFNI-SKLLGVL 295
+I + LL ++
Sbjct: 383 PSAHIPTILLSLI 395
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 9e-05
Identities = 55/324 (16%), Positives = 92/324 (28%), Gaps = 99/324 (30%)
Query: 8 NLFSNSLS---GSLPSNIQNLKV---LIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR 61
+L L LP + L + + I D T K + ++
Sbjct: 305 SLLLKYLDCRPQDLPR--EVLTTNPRRLSI---IAESIRDGLATWDNWKHVNC-----DK 354
Query: 62 SQGSIPKSFESLASLE----FLDLSSNNLSGKIP-------------------------K 92
I S L E F LS S IP
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 93 SLEALSNLKELNVSYNRLEGEIPTNVPFGNFSS--QSFISNYAL--CAHQDSKRTSYLDI 148
SL KE +S + E+ + N + +S + +Y + D YLD
Sbjct: 415 SL-VEKQPKESTISIPSIYLELKVKLE--NEYALHRSIVDHYNIPKTFDSDDLIPPYLD- 470
Query: 149 LQATDEFNEW------HLLGTESLG--SVYKWIFLDETNVAIKVFNLQLERAFRSFDSKC 200
+ HL E ++++ +FLD FR + K
Sbjct: 471 -------QYFYSHIGHHLKNIEHPERMTLFRMVFLD----------------FRFLEQK- 506
Query: 201 EVHKNVRHRNLI-----KILTTIAILILKPWYLSSCVMPNGDFPERLNIMIDMALAFE-Y 254
+RH + IL T+ L Y + + +N ++D E
Sbjct: 507 -----IRHDSTAWNASGSILNTLQQLKF---YKPYICDNDPKYERLVNAILDFLPKIEEN 558
Query: 255 LHHGRSTPMVHCDLKPSNNLLDED 278
L + T ++ L + + E+
Sbjct: 559 LICSKYTDLLRIALMAEDEAIFEE 582
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 6e-05
Identities = 40/176 (22%), Positives = 68/176 (38%), Gaps = 26/176 (14%)
Query: 138 QDSKRTSYLDILQAT-----DEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLE 190
K+T YL I ++ +G+ + G V+K F +T +A+K
Sbjct: 5 SSGKQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSGN 63
Query: 191 RAFRSFDSKCE---VHKNVRHRNLIK----ILTTIAILILKPWYLSSCV-----MPNGDF 238
+ + V K+ +++ +T + I + +C G
Sbjct: 64 KEENK-RILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME-LMGTCAEKLKKRMQGPI 121
Query: 239 PERL--NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
PER+ + + + A YL ++H D+KPSN LLDE + DF IS L
Sbjct: 122 PERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL 175
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 7e-05
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 21/146 (14%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL--- 215
+G G V + VA+K ++ + ++F ++ V +RH NL+++L
Sbjct: 199 QTIGKGEFGDVMLGDYRG-NKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 216 ----TTIAILI-------LKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMV 264
+ I+ L YL S L +D+ A EYL V
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVD-YLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFV 311
Query: 265 HCDLKPSNNLLDEDMVAHVSDFNISK 290
H DL N L+ ED VA VSDF ++K
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK 337
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 7e-05
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 180 VAIKVFNLQ-------LERAFRSFDSKCEVH--KNVRHRNLIKILTTIA-----ILILKP 225
VA+K+ N Q + + R E+ K RH ++IK+ I+ ++++
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRR------EIQNLKLFRHPHIIKLYQVISTPSDIFMVME- 96
Query: 226 WY-----LSSCVMPNGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278
Y L + NG E+ + + +Y H +VH DLKP N LLD
Sbjct: 97 -YVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAH 152
Query: 279 MVAHVSDFNISKLL--GVLL-----------PETFTRKK 304
M A ++DF +S ++ G L PE + +
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 191
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 8e-05
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 236 GDFPER--LNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
E+ +IM + A +LH + +VH DLKP N LLD++M +SDF S L
Sbjct: 195 VALSEKETRSIMRSLLEAVSFLHANN----IVHRDLKPENILLDDNMQIRLSDFGFSCHL 250
Query: 293 G 293
Sbjct: 251 E 251
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 9e-05
Identities = 39/155 (25%), Positives = 58/155 (37%), Gaps = 34/155 (21%)
Query: 161 LGTESLGSVYK--WIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIK 213
LG S G VY+ + ET VAIK N R F ++ V K ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 214 ILTTIAILILKPWYLSSCVMPNGD------------------FPERLNIMIDMAL----A 251
+L + +P + +M GD P L+ MI MA
Sbjct: 93 LLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 252 FEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
YL+ + VH DL N ++ ED + DF
Sbjct: 151 MAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDF 182
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 38/168 (22%), Positives = 53/168 (31%), Gaps = 65/168 (38%)
Query: 180 VAIKVFN---LQLERAFRSFDSKCEVHKNVRHRNLIK----ILTTIAILILKPWYLSSCV 232
VA+K E R + H+++RH N+++ ILT + I +
Sbjct: 48 VAVKYIERGAAIDENVQR----EIINHRSLRHPNIVRFKEVILTPTHLAI---------I 94
Query: 233 M-------------PNGDFPERLNIMIDMALAF--------EYLHHGRSTPMVHCDLKPS 271
M G F E D A F Y H + + H DLK
Sbjct: 95 MEYASGGELYERICNAGRFSE------DEARFFFQQLLSGVSYCHSMQ---ICHRDLKLE 145
Query: 272 NNLLDEDMVAH--VSDFNISKL--LGVLL-----------PETFTRKK 304
N LLD + DF SK L PE R++
Sbjct: 146 NTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 1e-04
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 49 LKDLTTLFLAGNRSQ-GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSY 107
+ L L +S G I +LEFL L + L + +L L LK+L +S
Sbjct: 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-SV-SNLPKLPKLKKLELSE 80
Query: 108 NRLEG 112
NR+ G
Sbjct: 81 NRIFG 85
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 1e-04
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 21 NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLEF 78
++ L+ LD + G I + +L L L + + L L+
Sbjct: 22 TPAAVRELV-LDNCKSND-GKIEGLTAEFVNLEFLSLINV----GLISVSNLPKLPKLKK 75
Query: 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111
L+LS N + G + E L NL LN+S N+L+
Sbjct: 76 LELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 1e-04
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 15/108 (13%)
Query: 20 SNIQNLKVLIGLDLSINRLYGD-----IPITISGLKDLTTLFLAGNR-----SQGSIPKS 69
+N L + NRL + T + L T+ + N + + +
Sbjct: 153 KKAKNAPPLRSIICGRNRL-ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 211
Query: 70 FESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGE 113
L+ LDL N + + +L++ NL+EL ++ L
Sbjct: 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 44/158 (27%)
Query: 180 VAIKVFNLQ-------LERAFRSFDSKCEVH--KNVRHRNLIKILTTIA-----ILILKP 225
VA+K + Q R R E+ K +RH ++IK+ I +++++
Sbjct: 37 VALKFISRQLLKKSDMHMRVER------EISYLKLLRHPHIIKLYDVITTPTDIVMVIE- 89
Query: 226 WY----LSSCVMPNGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM 279
Y L ++ E + A EY H + +VH DLKP N LLD+++
Sbjct: 90 -YAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNL 145
Query: 280 VAHVSDFNISKLL--GVLL-----------PETFTRKK 304
++DF +S ++ G L PE K
Sbjct: 146 NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 11 SNSLSGSLPSNI----QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
S L+ S+P+ I L +L N+L L LT L L+ N+ Q
Sbjct: 16 SKGLT-SVPTGIPSSATRL------ELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68
Query: 67 PKSFESLASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPTNVPFGNFSS 125
F+ L L L L N L +P + + L+ LKEL + N+L+ +VP G F
Sbjct: 69 DGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLK-----SVPDGIFDR 122
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 18/154 (11%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNL-QLERAFRSFDSKCEVHKNVRH 208
+ F + +G S G V+K I T VAIK+ +L + E + V
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS 79
Query: 209 RNLIKILTTIAILILKPW----YLS--SC--VMPNGDFPERL--NIMIDMALAFEYLHHG 258
+ K + + K W YL S ++ G E I+ ++ +YLH
Sbjct: 80 PYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH-- 136
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S +H D+K +N LL E ++DF ++ L
Sbjct: 137 -SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 32/161 (19%), Positives = 56/161 (34%), Gaps = 42/161 (26%)
Query: 161 LGTESLGSVYK--WIFL----DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG + G V+ L D+ VA+K E A + F + E+ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 215 LTTIAILILKPWYLSSCVMPNGD---------------------------FPERLNIMID 247
+P + M +GD + L +
Sbjct: 109 FG--VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 248 MALAFEYL--HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
+A YL H VH DL N L+ + +V + DF
Sbjct: 167 VAAGMVYLAGLH-----FVHRDLATRNCLVGQGLVVKIGDF 202
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 180 VAIKVFNLQ-------LERAFRSFDSKCEVH--KNVRHRNLIKILTTIA-----ILILKP 225
VA+K+ N Q + + R E+ K RH ++IK+ I+ ++++
Sbjct: 39 VAVKILNRQKIRSLDVVGKIKR------EIQNLKLFRHPHIIKLYQVISTPTDFFMVME- 91
Query: 226 WY-----LSSCVMPNGDFPER--LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278
Y L + +G E + + A +Y H +VH DLKP N LLD
Sbjct: 92 -YVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAH 147
Query: 279 MVAHVSDFNISKLL--GVLL-----------PETFTRKK 304
M A ++DF +S ++ G L PE + +
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 37/141 (26%)
Query: 180 VAIKVFN---LQLERAFRSFDSK-----CEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231
VAIK+ + + A + + E+ K + H +IKI + +Y+
Sbjct: 38 VAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA---EDYYI--- 91
Query: 232 VM-------------PNGDFPERL--NIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLL 275
V+ N E M LA +YLH +G ++H DLKP N LL
Sbjct: 92 VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPENVLL 147
Query: 276 ---DEDMVAHVSDFNISKLLG 293
+ED + ++DF SK+LG
Sbjct: 148 SSQEEDCLIKITDFGHSKILG 168
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 2e-04
Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 39/158 (24%)
Query: 160 LLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTT 217
+LG+ + V+ T A+K S +++ V K ++H N++
Sbjct: 16 VLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT---- 70
Query: 218 IAILILKPWYLSSC----VM-------------PNGDFPERL--NIMIDMALAFEYLH-H 257
L+ Y S+ VM G + E+ ++ + A +YLH +
Sbjct: 71 -----LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 258 GRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL 292
G +VH DLKP N L +E+ ++DF +SK+
Sbjct: 126 G----IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 23/159 (14%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCE---VHKNVR 207
++ + +G + GSV K + + +A+K ++ + + V ++
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEKEQK-QLLMDLDVVMRSSD 79
Query: 208 HRNLIK------ILTTIAILI------LKPWYLSSCVMPNGDFPERL--NIMIDMALAFE 253
+++ I + +Y + + PE + I + A
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 254 YLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+L +H D+KPSN LLD + DF IS L
Sbjct: 140 HLKENLKI--IHRDIKPSNILLDRSGNIKLCDFGISGQL 176
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 43/144 (29%)
Query: 180 VAIKVFN--------LQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231
VAI++ + + + +++ E+ K + H +IK +K ++ +
Sbjct: 163 VAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK---------IKNFFDAED 213
Query: 232 V------MPNGD----------FPERL--NIMIDMALAFEYLH-HGRSTPMVHCDLKPSN 272
M G+ E M LA +YLH +G ++H DLKP N
Sbjct: 214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG----IIHRDLKPEN 269
Query: 273 NLL---DEDMVAHVSDFNISKLLG 293
LL +ED + ++DF SK+LG
Sbjct: 270 VLLSSQEEDCLIKITDFGHSKILG 293
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 32/159 (20%)
Query: 160 LLGTESLGSVYKWI-FLDETNVAIKVFNLQ--LERAFRSFDSKCE--------VHKNVRH 208
LLG G+V+ D VAIKV L + S C V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 209 RNLIKILTTIA-----ILILKPWYLSSC------VMPNGDFPERL--NIMIDMALAFEYL 255
+I++L +L+L+ + G E + A ++
Sbjct: 98 PGVIRLLDWFETQEGFMLVLE--RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 256 H-HGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL 292
H G +VH D+K N L+D A + DF LL
Sbjct: 156 HSRG----VVHRDIKDENILIDLRRGCAKLIDFGSGALL 190
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 33/160 (20%), Positives = 55/160 (34%), Gaps = 39/160 (24%)
Query: 161 LGTESLGSVYK--WIFL----DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKI 214
LG + G V+ L D+ VA+K A + F + E+ N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 215 LTTIAILILKPWYLSSCVMPNGD----------------------------FPERLNIMI 246
P + M +GD + L+I
Sbjct: 83 YG--VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286
+A YL S VH DL N L+ +++ + DF
Sbjct: 141 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDF 177
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 5e-04
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Query: 236 GDFPER--LNIMIDMALAFEYLH-HGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNIS 289
F E IM + A ++H G +VH DLKP N L ++++ + DF +
Sbjct: 101 KHFSETEASYIMRKLVSAVSHMHDVG----VVHRDLKPENLLFTDENDNLEIKIIDFGFA 156
Query: 290 KLL 292
+L
Sbjct: 157 RLK 159
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 5e-04
Identities = 41/178 (23%), Positives = 66/178 (37%), Gaps = 31/178 (17%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDS-KCEVH--KNVR 207
D++ ++G+ + V VAIK NL E+ S D E+
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINL--EKCQTSMDELLKEIQAMSQCH 71
Query: 208 HRNLIKILTTIAILILKPW----YLS--SC-----------VMPNGDFPERL--NIMIDM 248
H N++ T+ ++ + W LS S +G E I+ ++
Sbjct: 72 HPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 249 ALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPT 306
EYLH +H D+K N LL ED ++DF +S L T + + T
Sbjct: 131 LEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT 185
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 6e-04
Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 40/164 (24%)
Query: 161 LGTESLGSVYK--------WIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
LG + ++K + L ET V +KV + SF + + H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 213 KILTTIAI-LILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYL--H 256
+ + L + G +L + +A A +L +
Sbjct: 76 LN---YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 257 HGRSTPMVHCDL--------KPSNNLLDEDMVAHVSDFNISKLL 292
++H ++ + + +SD IS +
Sbjct: 133 T-----LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 39.7 bits (93), Expect = 7e-04
Identities = 34/154 (22%), Positives = 56/154 (36%), Gaps = 21/154 (13%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDS-KCEVH--KNV 206
F++ +G S G+VY + + VAIK + +++ + EV + +
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 111
Query: 207 RHRNLIKILTTIAILILKPW----YLS-SCV----MPNGDFPERL--NIMIDMALAFEYL 255
RH N I+ + W Y S + E + YL
Sbjct: 112 RHPNTIQYRGCY-LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 170
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
H S M+H D+K N LL E + + DF +
Sbjct: 171 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 312 | |||
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 99.97 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 99.97 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 99.97 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 99.97 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 99.97 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 99.97 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 99.97 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 99.97 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 99.97 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 99.97 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 99.97 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.97 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 99.97 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 99.97 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 99.97 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 99.97 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 99.96 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 99.96 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.96 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.96 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.96 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 99.96 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.96 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 99.96 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 99.96 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 99.96 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.96 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 99.96 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 99.96 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.96 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 99.96 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.96 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 99.96 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 99.96 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 99.96 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.96 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 99.96 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.96 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 99.96 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 99.96 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 99.96 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 99.96 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 99.96 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 99.96 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.96 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 99.96 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 99.96 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.96 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.96 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 99.96 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 99.96 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 99.96 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 99.96 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 99.96 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 99.96 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.96 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 99.96 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 99.96 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.96 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 99.96 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.96 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.96 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 99.96 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 99.96 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 99.96 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 99.96 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 99.96 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.96 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 99.96 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.96 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.96 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.96 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.96 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.96 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 99.96 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 99.96 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.96 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 99.96 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.96 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.96 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 99.96 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 99.96 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.95 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 99.95 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.95 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 99.95 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 99.95 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 99.95 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 99.95 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 99.95 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 99.95 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.95 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.95 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 99.95 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 99.95 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.95 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 99.95 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.95 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.95 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.95 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 99.95 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.95 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.95 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 99.95 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 99.95 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 99.95 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 99.95 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.95 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 99.95 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.95 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 99.95 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.95 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.95 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 99.95 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.95 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 99.95 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 99.95 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.95 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 99.95 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 99.95 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.95 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.95 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 99.95 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.95 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 99.95 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 99.95 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.95 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.95 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 99.95 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.95 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 99.95 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.95 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 99.95 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.95 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 99.95 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 99.95 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.95 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 99.95 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 99.95 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 99.95 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.95 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 99.95 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.95 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.95 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.95 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 99.95 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.95 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 99.95 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.95 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.95 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 99.95 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.95 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.95 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.95 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 99.95 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.95 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 99.95 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.95 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.95 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.95 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.95 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.95 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 99.95 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 99.95 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.95 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.95 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.95 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.95 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 99.95 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.95 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.95 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.95 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.95 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.95 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.95 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 99.95 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.95 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.95 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.95 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.95 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 99.95 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.95 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 99.95 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.95 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.94 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.94 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.94 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 99.94 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.94 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.94 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 99.94 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.94 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.94 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.94 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.94 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.94 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 99.94 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.94 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.94 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.94 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.94 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.94 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.94 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.94 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.94 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.93 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.93 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.93 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.93 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.93 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.93 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.93 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.93 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.93 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.93 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.93 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.93 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.93 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.92 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.92 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.91 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.91 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.88 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.84 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.84 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.84 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.83 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.83 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.83 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.82 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 99.81 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.81 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 99.81 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.8 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.79 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.79 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.79 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.78 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.78 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.77 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.77 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.77 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.77 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.76 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.76 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.76 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.76 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.76 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.76 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.75 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.75 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.75 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.75 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.75 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.75 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.74 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.74 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.73 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.73 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.73 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.73 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.73 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.72 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.72 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.72 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.72 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 99.72 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 99.71 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.71 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.71 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.71 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.71 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.7 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.7 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 99.69 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.69 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.69 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 99.69 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.69 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.69 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.68 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.68 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.68 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.68 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 99.68 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.68 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 99.67 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.67 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.67 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.67 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.67 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.67 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.67 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.66 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.66 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.66 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.66 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.66 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 99.65 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 99.65 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 99.65 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.65 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 99.65 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 99.65 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.65 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 99.65 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.64 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.64 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.64 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 99.64 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.64 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.64 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.64 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.63 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 99.63 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.63 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.62 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 99.62 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.62 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.61 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.61 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.61 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.61 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.61 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.6 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.6 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.59 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.59 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.59 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.59 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.58 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.57 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.55 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.54 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.54 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.53 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 99.49 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.49 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.49 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.47 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.47 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.45 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.43 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.43 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.43 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.43 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.43 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.42 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.39 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.39 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.36 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.36 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.35 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.35 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.34 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.32 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.23 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.21 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.11 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.08 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.07 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.04 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 99.0 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 98.93 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.91 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.9 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.89 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 98.78 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.71 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.7 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.62 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 98.59 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.58 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.57 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.52 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 98.39 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.34 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.33 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.32 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.28 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 98.23 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.15 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.11 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.07 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.96 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.87 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 97.84 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.73 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 97.73 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.71 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.67 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.61 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.58 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 97.57 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 97.56 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 97.53 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.47 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.42 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 97.39 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.38 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.24 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.09 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.09 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.08 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 96.98 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 96.91 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 96.73 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.31 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.22 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.55 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 93.93 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 89.94 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 86.26 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 83.22 |
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=285.29 Aligned_cols=153 Identities=22% Similarity=0.345 Sum_probs=130.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++|||||++++++.. ...+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~--~~~~y 99 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE--NGSLY 99 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--CCEEE
Confidence 3568999999999999999999975 68999999997643 4456778999999999999999999999984 45689
Q ss_pred EEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 228 LSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++||||++|++.+.+ .|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 999999999886654 48999999999999 899999999999999999999999999999864
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~ 227 (350)
T 4b9d_A 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227 (350)
T ss_dssp HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999864
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=279.62 Aligned_cols=153 Identities=27% Similarity=0.411 Sum_probs=132.7
Q ss_pred ccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.++|...+.||+|+||.||+|++. +++.||||+++.......++|.+|++++++++|||||++++++. +...
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~ 89 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV--EGDP 89 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEe--eCCE
Confidence 356788899999999999999864 36679999998766666788999999999999999999999987 4456
Q ss_pred EEEEecccCCCCHHH-------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc
Q 036266 226 WYLSSCVMPNGDFPE-------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV 280 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~ 280 (312)
++++||||++|++.+ +++|+.||++||+||| +++||||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCc
Confidence 889999999997654 4569999999999999 889999999999999999999
Q ss_pred eEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 281 AHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 281 ~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
+||+|||+|+.. |++++||+| |+.||.+.
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999999864 999999998 89998764
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-39 Score=279.17 Aligned_cols=152 Identities=26% Similarity=0.385 Sum_probs=135.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||+||+|+.. +++.||||++++.. ....+.+.+|++++++++|||||++++++. +...+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~y 108 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--DDEKLY 108 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--eCCEEE
Confidence 357999999999999999999975 68899999998643 334567899999999999999999999998 456789
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+.+ .|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 109 ivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 109 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 999999999887655 49999999999999 899999999999999999999999999999753
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=280.70 Aligned_cols=152 Identities=26% Similarity=0.391 Sum_probs=130.4
Q ss_pred cccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++...+.||+|+||.||+|+++ +++.||||+++.......++|.+|++++++++|||||+++++|. +...+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~--~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCT--EGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--ECCEE
Confidence 46777889999999999999864 36779999998766666788999999999999999999999987 44568
Q ss_pred EEEecccCCCCHHH---------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC
Q 036266 227 YLSSCVMPNGDFPE---------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM 279 (312)
Q Consensus 227 ~l~~~~~~~g~~~~---------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~ 279 (312)
+++||||++|++.+ +++|+.|||+||+||| +++||||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCC
Confidence 89999999997654 4579999999999999 88999999999999999999
Q ss_pred ceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 280 VAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 280 ~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
.+||+|||+|+.. |++++||+| |+.||.+.
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~ 264 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC
Confidence 9999999999863 899999998 89998753
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=283.52 Aligned_cols=151 Identities=17% Similarity=0.311 Sum_probs=135.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
..|+..+.||+|+||.||+|++. +|+.||||+++.......+.+.+|+++|++++|||||++++++.. ...+|++||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~ivmE 151 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVME 151 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEEC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEEe
Confidence 56888999999999999999975 689999999987655555678899999999999999999999984 456899999
Q ss_pred ccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 232 VMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 232 ~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
||++|++.+.+ .|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 152 y~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~ 228 (346)
T 4fih_A 152 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228 (346)
T ss_dssp CCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred CCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence 99999776544 69999999999999 899999999999999999999999999999764
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||.+
T Consensus 229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999864
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=268.97 Aligned_cols=150 Identities=21% Similarity=0.265 Sum_probs=129.6
Q ss_pred ccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccEEEEe
Q 036266 156 NEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPWYLSS 230 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~~l~~ 230 (312)
+..+.||+|+||.||+|.+. +++.||+|++.... ....+.|.+|++++++++|||||++++++... ....++++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45668999999999999975 57889999997543 34557799999999999999999999998642 345689999
Q ss_pred cccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeC-CCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLD-EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~--- 292 (312)
|||++|++.+.+ .|+.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 999999876654 58999999999999 666 99999999999998 4799999999999864
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 186 ~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8999999999999864
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=275.57 Aligned_cols=152 Identities=24% Similarity=0.377 Sum_probs=129.9
Q ss_pred cccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.+++..+.||+|+||.||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|++.. ...
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--~~~ 103 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--DQP 103 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE--CCE
Confidence 34566789999999999999863 45679999997543 3345789999999999999999999999874 456
Q ss_pred EEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 226 WYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
++++||||++|++.+. ++|+.|||+||+||| +++||||||||+|||+++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~ 180 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYD 180 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECC
Confidence 7899999999977654 469999999999999 889999999999999999
Q ss_pred CCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 278 DMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 278 ~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
++.+||+|||+|+.. |++++|++| |+.||++.
T Consensus 181 ~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 181 KLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp GGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred CCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 999999999999763 999999998 88998763
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=285.23 Aligned_cols=152 Identities=17% Similarity=0.308 Sum_probs=135.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
...|+..+.||+|+||.||+|++. +|+.||||+++.......+.+.+|+.+|++++|||||+++++|.. ...+|++|
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--~~~~~iVm 227 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELWVVM 227 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEE--CCEEEEEE
Confidence 356999999999999999999975 689999999987655555678999999999999999999999984 45689999
Q ss_pred cccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 231 CVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
|||++|++.+.+ .|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+
T Consensus 228 Ey~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 304 (423)
T 4fie_A 228 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 304 (423)
T ss_dssp ECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB
T ss_pred eCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc
Confidence 999999776554 59999999999999 899999999999999999999999999999764
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||.+
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999854
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=273.32 Aligned_cols=151 Identities=23% Similarity=0.398 Sum_probs=130.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...+++...+.||+|+||+||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.. ..++
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---~~~~ 107 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---DNLA 107 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---CeEE
Confidence 34567888899999999999999864 359999987432 4556789999999999999999999998753 3478
Q ss_pred EEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++||||++|++.+ +++|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+..
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999996654 4579999999999999 889999999999999999999999999999753
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||++
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 8899999999999875
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=265.63 Aligned_cols=150 Identities=25% Similarity=0.373 Sum_probs=123.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++. +...+|+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--~~~~~~i 90 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK--SKDEIIM 90 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE--ECCEEEE
Confidence 57999999999999999999965 68999999997543 234567899999999999999999999987 4456889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+ +|++.+. ..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+..
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 4655443 469999999999999 899999999999999999999999999999874
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||++
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 8888888888888754
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-38 Score=273.72 Aligned_cols=151 Identities=29% Similarity=0.369 Sum_probs=126.5
Q ss_pred cccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++.. ...+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT--EGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE--TTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--CCEE
Confidence 57999999999999999999863 36789999997543 2233467889999999999999999999984 4568
Q ss_pred EEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
|++||||++|++.+.+ .++.|++.||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999775544 59999999999999 899999999999999999999999999999863
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=272.57 Aligned_cols=148 Identities=16% Similarity=0.169 Sum_probs=128.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.|...+.||+|+||.||+|++. +|+.||||+++.+.. ..+|+.++++++|||||++++++.. ...+|++|
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~--~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVRE--GPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEE
Confidence 356778889999999999999975 588999999986421 2469999999999999999999874 45689999
Q ss_pred cccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhhh-----
Q 036266 231 CVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~~----- 292 (312)
|||++|++.+.+ .|+.||+.||+||| +++||||||||+|||++.++ .+||+|||+|+.+
T Consensus 130 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 999999876654 59999999999999 89999999999999999887 6999999998642
Q ss_pred ------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++||+||+.||.+.
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 89999999999998653
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=263.68 Aligned_cols=137 Identities=25% Similarity=0.369 Sum_probs=115.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc-------
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL------- 223 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------- 223 (312)
++|+..+.||+|+||.||+|++. +++.||||+++... +...+.+.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46889999999999999999975 68899999997543 3455678999999999999999999999864332
Q ss_pred ---ccEEEEecccCCCCHHHHH---------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 224 ---KPWYLSSCVMPNGDFPERL---------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 224 ---~~~~l~~~~~~~g~~~~~~---------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
..+|++||||++|++.+.+ .|+.||++||+||| +++||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3478999999999876543 58999999999999 89999999999999999999999999
Q ss_pred ccchhhh
Q 036266 286 FNISKLL 292 (312)
Q Consensus 286 FG~a~~~ 292 (312)
||+|+.+
T Consensus 162 FGla~~~ 168 (299)
T 4g31_A 162 FGLVTAM 168 (299)
T ss_dssp CCCC---
T ss_pred Cccceec
Confidence 9999763
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-36 Score=260.42 Aligned_cols=137 Identities=18% Similarity=0.238 Sum_probs=112.8
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc--ccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--KPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~~~l~~ 230 (312)
.+|...+.||+|+||.||+|++ +|+.||||+++..... ...+..|+..+.+++|||||++++++...+. ..++++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3577788999999999999987 6889999999765322 2233456777788999999999999875443 3579999
Q ss_pred cccCCCCHH-----------HHHHHHHHHHHHHHHHhCC-----CCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 231 CVMPNGDFP-----------ERLNIMIDMALAFEYLHHG-----RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 231 ~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~-----~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||++|++. ++++++.|+++||+|||+. +.++||||||||+|||+|.++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999654 4557999999999999943 134999999999999999999999999999864
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-36 Score=265.13 Aligned_cols=159 Identities=23% Similarity=0.296 Sum_probs=134.7
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCC-Cceeeeeeee
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRH-RNLIKILTTI 218 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~~~~ 218 (312)
.++...++|+..+.||+|+||.||+|.+.. ++.||||.++... ....+.|.+|++++++++| ||||+++++|
T Consensus 58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~ 137 (353)
T 4ase_A 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 137 (353)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEE
Confidence 344566789999999999999999998642 2579999997654 3445779999999999975 8999999988
Q ss_pred eecccccEEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCC
Q 036266 219 AILILKPWYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKP 270 (312)
Q Consensus 219 ~~~~~~~~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp 270 (312)
... ...++++||||++|++.+. +.|+.|||+||+||| +++||||||||
T Consensus 138 ~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 138 TKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp CCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred Eec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 642 3457899999999876543 468999999999999 89999999999
Q ss_pred CCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 271 SNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
+|||+++++.+||+|||+|+.+ |++++||+| |+.||++.
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999753 999999998 89999764
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=267.39 Aligned_cols=153 Identities=23% Similarity=0.335 Sum_probs=131.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----cccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKP 225 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~ 225 (312)
++|+..+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|+++|++++|||||++++++... +...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 68999999997543 34456788999999999999999999987643 3457
Q ss_pred EEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+|++||||+++ +..+...|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 89999999743 33444579999999999999 899999999999999999999999999999742
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||++
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 8999999999999864
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-34 Score=270.25 Aligned_cols=153 Identities=19% Similarity=0.234 Sum_probs=130.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHh---HHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERA---FRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|+..+.||+|+||.||+|+.+ +|+.||||++++.. ... ......++.+++.++|||||+++++|. +.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~--~~ 264 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH--TP 264 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE--CS
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE--EC
Confidence 3578999999999999999999975 68899999997643 111 222234467778889999999999998 45
Q ss_pred ccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 224 KPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..+|++|||+++|++.+.+ .|+.||+.||+||| +++||||||||+|||+|.+|.+||+|||+|+.
T Consensus 265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 6789999999999887655 49999999999999 99999999999999999999999999999987
Q ss_pred h-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++||++|+.||.+
T Consensus 342 ~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 342 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp CSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred cCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 4 8999999999999853
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=253.73 Aligned_cols=137 Identities=18% Similarity=0.208 Sum_probs=116.8
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
.+....+.|+..+.||+|+||+||+|+.+ +++.||||.+.... ....+.+|+++++.+ +|||||++++++..
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~- 91 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRK- 91 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE-
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEE-
Confidence 34455678999999999999999999864 35679999987543 234578899999988 69999999999884
Q ss_pred ccccEEEEecccCCCCHHHH---------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccchh
Q 036266 222 ILKPWYLSSCVMPNGDFPER---------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISK 290 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~---------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a~ 290 (312)
...+|++|||+++|++.+. ..++.|++.||+||| +++||||||||+|||++.+ +.+||+|||+|+
T Consensus 92 -~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 92 -NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp -TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred -CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 4568999999999977654 469999999999999 8999999999999999876 799999999985
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=264.03 Aligned_cols=152 Identities=21% Similarity=0.254 Sum_probs=134.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|++++|||||+++++|. +...++++|
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~--~~~~~~iv~ 233 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE--DDNEMVMIY 233 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEE--CSSEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEE--ECCEEEEEE
Confidence 467999999999999999999975 68899999998765556677899999999999999999999998 456789999
Q ss_pred cccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC--CCceEEccccchhhh---
Q 036266 231 CVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE--DMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~~--- 292 (312)
|||++|++.+.+ .++.||+.||+||| +++|+||||||+|||++. .+.+||+|||+|+.+
T Consensus 234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 999999886654 59999999999999 899999999999999985 489999999999764
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|..||.+
T Consensus 311 ~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~ 358 (573)
T 3uto_A 311 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358 (573)
T ss_dssp SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 8889999999999864
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-31 Score=232.41 Aligned_cols=155 Identities=24% Similarity=0.334 Sum_probs=134.8
Q ss_pred hhhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
....++|+..+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++. ....
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~--~~~~ 88 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE--TEKT 88 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE--ECCE
Confidence 34566899999999999999999997 478999999997643 345567889999999999999999999987 4556
Q ss_pred EEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
.+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 8899999999977554 369999999999999 889999999999999999999999999998653
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 166 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 216 (328)
T 3fe3_A 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216 (328)
T ss_dssp SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 8888999999988864
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=226.38 Aligned_cols=153 Identities=20% Similarity=0.363 Sum_probs=133.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...+|+..+.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.. ....+++
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE--CCEEEEE
Confidence 4567999999999999999999964 688999999987655556678899999999999999999999874 4457899
Q ss_pred ecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 230 SCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 230 ~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 172 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172 (297)
T ss_dssp EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc
Confidence 999999977554 469999999999999 889999999999999999999999999987542
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||..
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 218 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999854
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=230.73 Aligned_cols=153 Identities=22% Similarity=0.262 Sum_probs=131.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+.+|.++++.+ +||||+++++++. ....
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~--~~~~ 98 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ--TPDR 98 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE--CSSE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEE--eCCE
Confidence 3567999999999999999999975 58899999998643 33445678899999988 6999999999987 4456
Q ss_pred EEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++|||+++|++... ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 8899999999977544 359999999999999 889999999999999999999999999998741
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=237.12 Aligned_cols=157 Identities=20% Similarity=0.291 Sum_probs=134.0
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
.+.....++|+..+.||+|+||.||+|+.. +++.||+|++++.. ......+.+|+.+++.++|||||++++++.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-- 139 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-- 139 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--
Confidence 344456788999999999999999999976 57889999997643 122345788999999999999999999988
Q ss_pred ccccEEEEecccCCCCHHHHH-----------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 222 ILKPWYLSSCVMPNGDFPERL-----------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~~-----------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+...++++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 140 ~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 140 DDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 456689999999999776543 58999999999999 8999999999999999999999999999985
Q ss_pred hh-----------------------------------------hhhhhhhhcCCCCCc
Q 036266 291 LL-----------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 291 ~~-----------------------------------------g~~~~e~~tg~~p~~ 307 (312)
.. |++++||++|+.||.
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 274 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 274 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCC
Confidence 32 788899999999875
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=237.37 Aligned_cols=158 Identities=21% Similarity=0.269 Sum_probs=134.0
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
.+.....++|+..+.||+|+||.||+|+... ++.||||++++... .....+.+|..+++.++||||+++++++.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-- 144 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ-- 144 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE--
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--
Confidence 3444567899999999999999999999864 77899999986431 22334788999999999999999999987
Q ss_pred ccccEEEEecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 222 ILKPWYLSSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
+...++++|||+++|++.+.+ .++.|++.||+||| +.+||||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 455689999999999776544 58999999999999 89999999999999999999999999998
Q ss_pred hhhh------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.. |++++||++|+.||..
T Consensus 222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 8532 7888889999998853
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=228.78 Aligned_cols=152 Identities=22% Similarity=0.272 Sum_probs=131.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+.. +++.||+|++++.. ......+.+|++++++++||||+++++++.. ...++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~--~~~~~ 81 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLC 81 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC--SSEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe--CCEEE
Confidence 467899999999999999999975 58899999998653 2344568899999999999999999999874 45688
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++... ..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999977543 358999999999999 889999999999999999999999999998742
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 8899999999999853
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=226.66 Aligned_cols=154 Identities=20% Similarity=0.261 Sum_probs=131.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...++|+..+.||+|+||.||+|++.+++.||+|++.... ......+.+|++++++++||||+++++++. .....+
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~ 95 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH--SERCLT 95 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC--CSSCEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc--cCCEEE
Confidence 4567899999999999999999999889999999997543 223467889999999999999999999987 445678
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||++++ +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 96 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 96 LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 899999853 34556679999999999999 889999999999999999999999999998652
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 222 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG 222 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-30 Score=229.56 Aligned_cols=161 Identities=30% Similarity=0.484 Sum_probs=140.1
Q ss_pred chHHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 143 TSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
.+..++....++|+..+.||+|+||.||+|.+.+++.||||++........+.+.+|++++++++||||+++++++..
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 106 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-- 106 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC--
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--
Confidence 344556678889999999999999999999987889999999876655566788999999999999999999999874
Q ss_pred cccEEEEecccCCC----------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 223 LKPWYLSSCVMPNG----------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 223 ~~~~~l~~~~~~~g----------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
....+++|||+++| ++.++++++.|+++||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 45678888899876 45667789999999999999 889999999999999999999999999
Q ss_pred cchhhh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|++||+.|+..
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~ 243 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ 243 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSC
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccc
Confidence 988531 8999999999998754
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=225.18 Aligned_cols=152 Identities=25% Similarity=0.360 Sum_probs=132.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..+++.++||||+++++++. +...++
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~--~~~~~~ 82 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--DAQQIF 82 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--CSSEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEE--eCCEEE
Confidence 467899999999999999999975 68899999998653 223456788999999999999999999987 455689
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 999999999776544 58999999999999 899999999999999999999999999998642
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||.+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 8999999999999853
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=233.18 Aligned_cols=142 Identities=20% Similarity=0.235 Sum_probs=121.7
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 220 (312)
+.+.....++|+..+.||+|+||.||+|+.+ +++.||||++++.. ......+.+|..++.+++||||+++++++.
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~- 131 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ- 131 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE-
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe-
Confidence 3344556788999999999999999999975 68899999997643 223345788999999999999999999987
Q ss_pred cccccEEEEecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcccc
Q 036266 221 LILKPWYLSSCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
+...++++|||+++|++.+.+ .++.||+.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 132 -~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 132 -DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp -CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred -eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 455689999999999776543 58999999999999 8999999999999999999999999999
Q ss_pred chhh
Q 036266 288 ISKL 291 (312)
Q Consensus 288 ~a~~ 291 (312)
+|+.
T Consensus 208 la~~ 211 (412)
T 2vd5_A 208 SCLK 211 (412)
T ss_dssp TCEE
T ss_pred hhee
Confidence 8753
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-30 Score=223.18 Aligned_cols=155 Identities=23% Similarity=0.294 Sum_probs=129.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--------------------------HhHHHHHHHHHHh
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--------------------------RAFRSFDSKCEVH 203 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l 203 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 3467999999999999999999975 578899999975421 1235688999999
Q ss_pred hcCCCCceeeeeeeeeecccccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCC
Q 036266 204 KNVRHRNLIKILTTIAILILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSN 272 (312)
Q Consensus 204 ~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~N 272 (312)
++++||||+++++++........+++|||++++ ++.+...++.|+++||+||| +.+|+||||||+|
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSN 167 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHH
Confidence 999999999999998865567789999999876 46677889999999999999 8899999999999
Q ss_pred eeeCCCCceEEccccchhhh---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 273 NLLDEDMVAHVSDFNISKLL---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 273 ill~~~~~~kl~DFG~a~~~---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.++.+||+|||+|+.. |++++|+++|+.||.+
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999987542 7788888888888753
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=221.19 Aligned_cols=152 Identities=22% Similarity=0.346 Sum_probs=132.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|++. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++. .....+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~--~~~~~~ 87 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE--EDDCYY 87 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE--CSSEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee--eCCeEE
Confidence 457999999999999999999975 58899999985432 445577899999999999999999999987 445678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999986654 4469999999999999 889999999999999999999999999988642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||++
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 214 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=222.71 Aligned_cols=156 Identities=26% Similarity=0.388 Sum_probs=130.0
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
+......+|+..+.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~ 107 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ--PP 107 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--TT
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CC
Confidence 3344567899999999999999999986 67889999997543 3445678999999999999999999999874 44
Q ss_pred cEEEEecccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeCCCCceEEcccc
Q 036266 225 PWYLSSCVMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
..+++|||+++|++.+ ++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 5788899999986654 3468999999999999 778 9999999999999999999999999
Q ss_pred chhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|+.. |++++|++||+.||..
T Consensus 185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 98642 8899999999999865
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.3e-30 Score=231.62 Aligned_cols=152 Identities=20% Similarity=0.296 Sum_probs=130.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ....+.+.+|..+++++ +||||+++++++. ....
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~--~~~~ 127 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ--TESR 127 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEE--CSSE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEE--ECCE
Confidence 4567999999999999999999976 57789999998653 23345578899999877 8999999999987 4556
Q ss_pred EEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++|||+++|++... ..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 8899999999976543 358999999999999 889999999999999999999999999998751
Q ss_pred -----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||++|+.||.
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~ 254 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence 899999999999984
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-30 Score=229.69 Aligned_cols=153 Identities=27% Similarity=0.408 Sum_probs=130.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAI 220 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 220 (312)
..++|...+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 3467899999999999999999863 23469999997653 44567789999999999 89999999999873
Q ss_pred cccccEEEEecccCCCCHHHH----------------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCC
Q 036266 221 LILKPWYLSSCVMPNGDFPER----------------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSN 272 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~~----------------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~N 272 (312)
...++++|||+++|++.+. +.++.|++.||+||| +.+|+||||||+|
T Consensus 159 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~N 233 (370)
T 2psq_A 159 --DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARN 233 (370)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGG
T ss_pred --CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhh
Confidence 4567888999999876543 458999999999999 8899999999999
Q ss_pred eeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 273 NLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 273 ill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
||++.++.+||+|||+|+.. |++++|++| |+.|+++
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~ 308 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999998632 888889998 8888765
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=9.4e-30 Score=224.31 Aligned_cols=149 Identities=18% Similarity=0.307 Sum_probs=130.3
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++.. ....+++|||+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv~e~~ 124 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV--GEELWVLMEFL 124 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEEECCC
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CCEEEEEEecC
Confidence 667789999999999999976 689999999987655556778899999999999999999999874 34678999999
Q ss_pred CCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 234 PNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 234 ~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
+++++. ++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 125 ~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 201 (321)
T 2c30_A 125 QGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL 201 (321)
T ss_dssp CSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence 998654 45579999999999999 889999999999999999999999999987542
Q ss_pred --------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 202 ~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999998753
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=225.47 Aligned_cols=151 Identities=21% Similarity=0.298 Sum_probs=131.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|..+++++ +||||+++++++. ....+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~--~~~~~ 85 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ--TESRL 85 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE--CSSEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEE--eCCEE
Confidence 457899999999999999999976 57889999998643 34456678899999887 8999999999987 45568
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 86 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 999999999977544 358999999999999 889999999999999999999999999998741
Q ss_pred ----------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||++|+.||.
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 211 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcC
Confidence 899999999999985
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-30 Score=221.65 Aligned_cols=151 Identities=19% Similarity=0.303 Sum_probs=129.1
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|+..+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT--KKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--SSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--CCeEEEEE
Confidence 5788999999999999999998778999999997543 2234668899999999999999999999874 45678888
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||+++. +..+...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 156 (288)
T 1ob3_A 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (288)
T ss_dssp ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred EecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc
Confidence 888742 34556679999999999999 889999999999999999999999999998653
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888754
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.4e-30 Score=235.71 Aligned_cols=155 Identities=23% Similarity=0.308 Sum_probs=131.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.+++.++||||+++++++.... .
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3567999999999999999999975 57889999997542 445667889999999999999999999986432 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
..++++|||++++ +..+...++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 4679999999875 44556689999999999999 889999999999999999999999999998763
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||++
T Consensus 217 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 217 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=226.45 Aligned_cols=152 Identities=26% Similarity=0.345 Sum_probs=132.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++. +...++
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~ 117 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--DNSNLY 117 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--cCCEEE
Confidence 467999999999999999999975 68899999997653 234467888999999999999999999987 455688
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 99999999976554 358999999999999 899999999999999999999999999998742
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 8999999999999753
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=224.05 Aligned_cols=137 Identities=20% Similarity=0.307 Sum_probs=117.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc--cccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI--LKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~~~ 227 (312)
...++|+..+.||+|+||.||+|++. ++.||||++..... ......+|+.++++++||||+++++++.... ...++
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 45578999999999999999999874 78899999976533 3345567999999999999999999987543 34578
Q ss_pred EEecccCCCCHHH-----------HHHHHHHHHHHHHHHhCCCCC----------CceecCCCCCCeeeCCCCceEEccc
Q 036266 228 LSSCVMPNGDFPE-----------RLNIMIDMALAFEYLHHGRST----------PMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 228 l~~~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~~~~----------~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
++|||+++|++.+ +..++.|+++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999986654 4579999999999999 77 9999999999999999999999999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|+|+.
T Consensus 176 g~a~~ 180 (322)
T 3soc_A 176 GLALK 180 (322)
T ss_dssp TTCEE
T ss_pred Ccccc
Confidence 99843
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=7.5e-30 Score=222.02 Aligned_cols=138 Identities=22% Similarity=0.340 Sum_probs=121.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|++. +++.||||++........+.+.+|++++++++||||+++++++...+...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 4567899999999999999999842 57789999998766666678999999999999999999999987656667
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 889999999986654 3468999999999999 89999999999999999999999999999865
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=226.91 Aligned_cols=165 Identities=32% Similarity=0.435 Sum_probs=139.0
Q ss_pred CCchHHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 141 KRTSYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
...++.++....++|+..+.||+|+||.||+|...+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 3456778888999999999999999999999998788999999997654 223346889999999999999999999987
Q ss_pred ecccccEEEEecccCCCCHH----------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 220 ILILKPWYLSSCVMPNGDFP----------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~----------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
. ....+++|||+++|++. .+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||
T Consensus 98 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 98 T--PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp C--SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred c--CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 4 44567888899988554 45579999999999999332239999999999999999999999
Q ss_pred ccccchhhh-------------------------------------hhhhhhhhcCCCCCc
Q 036266 284 SDFNISKLL-------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 284 ~DFG~a~~~-------------------------------------g~~~~e~~tg~~p~~ 307 (312)
+|||+|+.. |++++|++||+.|++
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 999998642 899999999999985
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-30 Score=226.23 Aligned_cols=154 Identities=25% Similarity=0.317 Sum_probs=131.3
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILK 224 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 224 (312)
...++|...+.||+|+||.||+|+.. +++.||||+++... ......+..|..+++.+ +||||+++++++.. ..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~--~~ 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT--KE 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC--SS
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe--CC
Confidence 45678999999999999999999976 57889999998653 23345677899998876 89999999999874 45
Q ss_pred cEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.++++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 68899999999977554 358999999999999 889999999999999999999999999998642
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 8899999999999853
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=220.24 Aligned_cols=135 Identities=22% Similarity=0.335 Sum_probs=119.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|...+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.. ....+++
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 85 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK--DKRLNFI 85 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec--CCeeEEE
Confidence 3467889999999999999999975 588899999876556667889999999999999999999999874 4567888
Q ss_pred ecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 230 SCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
|||+++|++. ++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccce
Confidence 9999998654 44569999999999999 8899999999999999999999999999985
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=228.52 Aligned_cols=152 Identities=24% Similarity=0.387 Sum_probs=131.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|||||++++++. +...+
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~ 90 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ--DEEDM 90 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--eCCEE
Confidence 3467999999999999999999975 57889999997643 234567889999999999999999999988 44568
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||+++|++... ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 91 FMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp EEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 899999999876544 469999999999999 899999999999999999999999999998642
Q ss_pred ------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++||++|+.||.
T Consensus 168 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~ 218 (384)
T 4fr4_A 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218 (384)
T ss_dssp TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCC
Confidence 788888888888875
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=224.08 Aligned_cols=152 Identities=22% Similarity=0.339 Sum_probs=129.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++. .....+++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~--~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR--EGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCCeEEEE
Confidence 467999999999999999999976 68899999997543 233456889999999999999999999987 44567888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||+++| +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 9999887 45667789999999999999 899999999999999999999999999998532
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 210 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999854
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=222.25 Aligned_cols=151 Identities=16% Similarity=0.256 Sum_probs=131.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|...+.||+|+||.||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.. ....+++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~ 80 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFES--MEELVMIF 80 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEec--CCEEEEEE
Confidence 467899999999999999999976 57789999997543 344568899999999999999999999874 45688999
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC--CCceEEccccchhhh---
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE--DMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~~--- 292 (312)
||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.+
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 9999986654 4469999999999999 889999999999999986 789999999998652
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||..
T Consensus 158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 205 (321)
T 1tki_A 158 DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence 8899999999999854
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=222.05 Aligned_cols=153 Identities=25% Similarity=0.386 Sum_probs=131.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...+|...+.||+|+||.||+|.+. .+..||||+++... ....+.+.+|++++++++||||+++++++. ....
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~ 124 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT--RGRL 124 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--GGGC
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--eCCc
Confidence 3567889999999999999999974 24459999998643 445577899999999999999999999986 4556
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||+++|++.+ +..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred cEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 788999999986654 4469999999999999 889999999999999999999999999998642
Q ss_pred ---------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |..||.+
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 888899998 8888854
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=224.38 Aligned_cols=151 Identities=25% Similarity=0.370 Sum_probs=130.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|...+.||+|+||.||+|.+. +++.||||++.... ......+.+|+++++.++||||+++++++.. ....+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~--~~~~~ 85 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT--PTDIV 85 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe--CCEEE
Confidence 467899999999999999999974 68899999998643 2234568899999999999999999999874 45678
Q ss_pred EEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+ +|+ ..+...++.|++.|++||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999999 454 3445679999999999999 889999999999999999999999999998653
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 8899999999999865
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=225.70 Aligned_cols=153 Identities=19% Similarity=0.257 Sum_probs=131.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhH------hHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLER------AFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..+.|+..+.||+|+||.||+|... +++.||+|+++..... ..+.+.+|+.++++++||||+++++++. ..
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~ 87 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE--NR 87 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CS
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE--eC
Confidence 4467899999999999999999976 5889999999764321 3467899999999999999999999987 44
Q ss_pred ccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC----ceEEcccc
Q 036266 224 KPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFN 287 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG 287 (312)
..++++|||+++|++.+. ..++.||+.||+||| +.+|+||||||+||++++++ .+||+|||
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 568899999999976554 469999999999999 88999999999999998776 79999999
Q ss_pred chhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|+.. |++++|+++|..||.+
T Consensus 165 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp SCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 98652 8899999999999853
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-29 Score=228.56 Aligned_cols=156 Identities=28% Similarity=0.407 Sum_probs=133.7
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
....++|...+.||+|+||.||+|.+. +++.||||.++... ......+.+|++++++++||||+++++++. .....
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~ 187 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT--QKQPI 187 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC--SSSSC
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe--cCCCc
Confidence 344568889999999999999999986 68899999997543 334456889999999999999999999987 34567
Q ss_pred EEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||+++|++.+ .+.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 88999999986644 3469999999999999 889999999999999999999999999987631
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |..|++..
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 889999998 89898753
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=223.52 Aligned_cols=153 Identities=19% Similarity=0.308 Sum_probs=124.7
Q ss_pred hccccccceEeccCCcEEEEEEEE----cCCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF----LDETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++++++||||+++++++. .
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~ 92 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ--T 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE--C
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE--c
Confidence 456799999999999999999997 367899999997542 233456788999999999999999999987 4
Q ss_pred cccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
....+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 93 GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 4568899999999876543 458999999999999 8899999999999999999999999999886
Q ss_pred hh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.||..
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 42 8899999999999854
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=231.91 Aligned_cols=156 Identities=22% Similarity=0.419 Sum_probs=135.8
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
......++|+..+.||+|+||.||+|.+.+++.||||+++... ...+.+.+|++++++++||||+++++++. ....
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~---~~~~ 257 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT---KEPI 257 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSC
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe---CCcc
Confidence 3455667899999999999999999998888889999998643 34577899999999999999999999875 3457
Q ss_pred EEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+++|||+++|++.+. ++++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 899999999976543 468999999999999 889999999999999999999999999999753
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.|+++.
T Consensus 335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 889999999 99998753
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=223.10 Aligned_cols=137 Identities=26% Similarity=0.360 Sum_probs=117.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL------ 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 223 (312)
.++|+..+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467899999999999999999986 68899999997543 3455778999999999999999999998754321
Q ss_pred -------------------------------------------------ccEEEEecccCCCCHHH--------------
Q 036266 224 -------------------------------------------------KPWYLSSCVMPNGDFPE-------------- 240 (312)
Q Consensus 224 -------------------------------------------------~~~~l~~~~~~~g~~~~-------------- 240 (312)
...+++|||+++|++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 23789999999997765
Q ss_pred -HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 241 -RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 241 -~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.++++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 213 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccc
Confidence 4569999999999999 88999999999999999999999999998753
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=221.30 Aligned_cols=153 Identities=24% Similarity=0.267 Sum_probs=132.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++........+++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467899999999999999999976 48899999998643 3345667899999999999999999999887666678999
Q ss_pred ecccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee----CCCCceEEccccchh
Q 036266 230 SCVMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill----~~~~~~kl~DFG~a~ 290 (312)
|||+++|++.+ ...++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999886544 4569999999999999 8899999999999999 788889999999985
Q ss_pred hh-------------------------------------------hhhhhhhhcCCCCCc
Q 036266 291 LL-------------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 291 ~~-------------------------------------------g~~~~e~~tg~~p~~ 307 (312)
.. |++++|++||+.||.
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 224 (319)
T 4euu_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224 (319)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred ecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 42 888889999998885
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=224.89 Aligned_cols=153 Identities=21% Similarity=0.265 Sum_probs=131.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ......+..|..+++.+ +||+|+++++++. ....
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~--~~~~ 95 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--TMDR 95 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE--CSSE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE--cCCE
Confidence 4567999999999999999999976 47789999998653 23445678899999888 7999999999987 4456
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++|||+++|++.+.+ .++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 88999999999775543 58999999999999 889999999999999999999999999998751
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 8899999999999853
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-29 Score=224.02 Aligned_cols=152 Identities=18% Similarity=0.276 Sum_probs=129.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-----HhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-----RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.+.|+..+.||+|+||.||+|... +++.||||+++.... ...+.+.+|+.++++++||||+++++++.. ...
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~ 100 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--DGM 100 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe--CCE
Confidence 457899999999999999999975 688999999975431 135678999999999999999999999874 456
Q ss_pred EEEEecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc---eEEccc
Q 036266 226 WYLSSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV---AHVSDF 286 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~---~kl~DF 286 (312)
++++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++.++. +||+||
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Df 177 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGF 177 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecC
Confidence 889999999987643 2358999999999999 889999999999999986554 999999
Q ss_pred cchhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|+++|+.||.+
T Consensus 178 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 178 GVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp TTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 998552 8889999999988754
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=226.15 Aligned_cols=153 Identities=25% Similarity=0.433 Sum_probs=124.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...+|+..+.||+|+||.||+|+.. ++..||||.++... ....+.+.+|+.++++++||||+++++++. ....
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~ 120 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT--KSKP 120 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--SSSS
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--eCCc
Confidence 3457899999999999999999864 45679999997643 445577999999999999999999999987 3456
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||+++|++.+ ++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 788999999886654 4569999999999999 889999999999999999999999999998653
Q ss_pred ---------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 888888887 8888754
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=223.76 Aligned_cols=153 Identities=22% Similarity=0.375 Sum_probs=131.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. +....+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--EESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--eCCEEE
Confidence 3567999999999999999999975 58899999997643 344567889999999999999999999987 445678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~DFG~a~~~ 292 (312)
++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+|+..
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999986644 4479999999999999 8899999999999999854 45999999998642
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||.+
T Consensus 182 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp TTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 8899999999999753
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-29 Score=214.79 Aligned_cols=152 Identities=26% Similarity=0.386 Sum_probs=131.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++. +....+++|
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 84 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCL--EQAPICLVF 84 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSSEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCCceEEEE
Confidence 346789999999999999999998888889999998653 23356889999999999999999999987 445678999
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||++++++.+ ...++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 85 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred EeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 9999986554 4469999999999999 889999999999999999999999999998742
Q ss_pred --------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 888888888 8888754
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=218.11 Aligned_cols=134 Identities=19% Similarity=0.281 Sum_probs=116.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.. ....+++
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--CCEEEEE
Confidence 57889999999999999999975 58889999997543 3344678899999999999999999999874 4567888
Q ss_pred ecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||++++ +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 80 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~ 150 (292)
T 3o0g_A 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARA 150 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 9999854 44556689999999999999 88999999999999999999999999999864
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=220.70 Aligned_cols=155 Identities=21% Similarity=0.331 Sum_probs=130.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc--c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--K 224 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~ 224 (312)
..++|+..+.||+|+||.||+|++. +++.||||+++... ......+.+|++++++++||||+++++++..... .
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 3567999999999999999999974 67889999997643 3445678899999999999999999999864432 3
Q ss_pred cEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..+++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 4589999999886544 4569999999999999 889999999999999999999999999998632
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||..
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 221 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=225.82 Aligned_cols=153 Identities=27% Similarity=0.334 Sum_probs=123.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHH-hhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEV-HKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ......+.+|..+ ++.++||||+++++++. ....
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~--~~~~ 113 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ--TADK 113 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEE--CSSE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEE--eCCE
Confidence 3467999999999999999999976 57889999998653 2233456667766 57789999999999987 4457
Q ss_pred EEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++|||+++|++.+.+ .++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~ 190 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI 190 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence 88999999999775543 48999999999999 899999999999999999999999999998762
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|..||..
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 191 EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 8999999999999853
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=224.53 Aligned_cols=152 Identities=18% Similarity=0.259 Sum_probs=132.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.|+..+.||+|+||.||+|... +++.||+|++..........+.+|++++++++||||+++++++. +....+++|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--~~~~~~lv~ 127 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--DKYEMVLIL 127 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--CSSEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE--eCCEEEEEE
Confidence 457999999999999999999975 68889999998765555567899999999999999999999987 455688999
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~~~kl~DFG~a~~~--- 292 (312)
||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+|+..
T Consensus 128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 9999886544 4579999999999999 88999999999999997 4578999999998753
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||..
T Consensus 205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 252 (387)
T 1kob_A 205 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252 (387)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=229.78 Aligned_cols=153 Identities=20% Similarity=0.329 Sum_probs=129.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. +....+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~--~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS--EEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE--CSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE--ECCEEE
Confidence 4567999999999999999999975 68889999997643 344567899999999999999999999987 455678
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~a~~~ 292 (312)
++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++ +++.+||+|||+|+..
T Consensus 87 lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999977554 469999999999999 88999999999999998 5678999999998542
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||.+
T Consensus 164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 164 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp CTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 8888999999988743
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=232.05 Aligned_cols=153 Identities=23% Similarity=0.264 Sum_probs=124.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ......+.+|++++++++||||+++++++.. ...+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~--~~~~ 223 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRL 223 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE--TTEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee--CCEE
Confidence 4567999999999999999999975 68899999998643 2334567889999999999999999999874 4467
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||+++|++.. ...++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+|+..
T Consensus 224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 89999999997644 3468999999999999 7 89999999999999999999999999998752
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 8999999999999854
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-29 Score=215.65 Aligned_cols=154 Identities=27% Similarity=0.385 Sum_probs=130.3
Q ss_pred hhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
....++|+..+.||+|+||.||+|.+.++..||+|+++.... ..+++.+|++++++++||||+++++++. .....++
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~l 96 (283)
T 3gen_A 20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFI 96 (283)
T ss_dssp BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSSEEE
T ss_pred cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEe--cCCCeEE
Confidence 345678999999999999999999988888899999986532 3356889999999999999999999987 4556889
Q ss_pred EecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 229 SSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 999999886544 4579999999999999 889999999999999999999999999998742
Q ss_pred ----------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ----------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 888899998 8888764
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=221.18 Aligned_cols=151 Identities=23% Similarity=0.330 Sum_probs=114.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.. ....+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHT--ENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECC--TTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEE--CCeEEEE
Confidence 467899999999999999999965 58899999997543 2334668899999999999999999999874 4567888
Q ss_pred ecccCCCCH------------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDF------------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~------------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||+++ ++ .....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 82 ~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 999984 43 334568889999999999 88999999999999999999999999999864
Q ss_pred h-------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L-------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~-------------------------------------g~~~~e~~tg~~p~~e 308 (312)
. |++++|++||+.||+.
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2 7888888888888754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=226.42 Aligned_cols=136 Identities=24% Similarity=0.316 Sum_probs=110.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehh--hhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ--LERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|.+. +++.||||++... .....+.+.+|+.+++++. ||||+++++++...+...+
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4567999999999999999999975 6889999998643 2445567789999999997 9999999999987666678
Q ss_pred EEEecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|||+++ ++. ....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 87 ~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCSE-EHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccCc-CHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 999999984 443 44568999999999999 8899999999999999999999999999885
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=220.98 Aligned_cols=159 Identities=27% Similarity=0.380 Sum_probs=134.7
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTT 217 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~ 217 (312)
........++|+..+.||+|+||.||+|++.. ++.||||+++... ....+.+.+|++++++++||||++++++
T Consensus 39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 118 (343)
T 1luf_A 39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 118 (343)
T ss_dssp HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 34445567889999999999999999999742 3679999998653 3445778999999999999999999999
Q ss_pred eeecccccEEEEecccCCCCHHHH------------------------------------HHHHHHHHHHHHHHhCCCCC
Q 036266 218 IAILILKPWYLSSCVMPNGDFPER------------------------------------LNIMIDMALAFEYLHHGRST 261 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~g~~~~~------------------------------------~~i~~~i~~~l~ylH~~~~~ 261 (312)
+.. ....+++|||+++|++.+. +.++.|+++||+||| +.
T Consensus 119 ~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~ 193 (343)
T 1luf_A 119 CAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ER 193 (343)
T ss_dssp ECS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred Ecc--CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 874 4567888999998876543 348999999999999 88
Q ss_pred CceecCCCCCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-C
Q 036266 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-R 302 (312)
Q Consensus 262 ~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g 302 (312)
+|+||||||+||+++.++.+||+|||+++.. |++++|++| |
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 9999999999999999999999999998652 788888998 8
Q ss_pred CCCCcc
Q 036266 303 KKPTIE 308 (312)
Q Consensus 303 ~~p~~e 308 (312)
..|+.+
T Consensus 274 ~~p~~~ 279 (343)
T 1luf_A 274 LQPYYG 279 (343)
T ss_dssp CCTTTT
T ss_pred CCcCCC
Confidence 888754
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=213.29 Aligned_cols=152 Identities=24% Similarity=0.372 Sum_probs=132.0
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.||+|+||.||+|...++..||+|+++... ...+++.+|++++++++||||+++++++. .....+++|
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~ 82 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCS--KEYPIYIVT 82 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSSEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEc--cCCceEEEE
Confidence 456789999999999999999998888889999997653 23356889999999999999999999986 455678999
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||++++++.+ +..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred EccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 9999886544 4569999999999999 889999999999999999999999999988632
Q ss_pred --------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 889999998 8888854
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.4e-29 Score=222.59 Aligned_cols=139 Identities=24% Similarity=0.345 Sum_probs=119.5
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCCCCceeeeeeeeee
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 220 (312)
++....++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~- 98 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE- 98 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-
Confidence 34566788999999999999999999975 57889999997642 234567899999999999999999999987
Q ss_pred cccccEEEEecccCCCCHHHHH----------------------------------------------------HHHHHH
Q 036266 221 LILKPWYLSSCVMPNGDFPERL----------------------------------------------------NIMIDM 248 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~~~----------------------------------------------------~i~~~i 248 (312)
+....+++|||+++|++.+.+ .++.|+
T Consensus 99 -~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 177 (345)
T 3hko_A 99 -DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI 177 (345)
T ss_dssp -CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred -cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 455688999999998775533 589999
Q ss_pred HHHHHHHhCCCCCCceecCCCCCCeeeCCCC--ceEEccccchh
Q 036266 249 ALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM--VAHVSDFNISK 290 (312)
Q Consensus 249 ~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~--~~kl~DFG~a~ 290 (312)
++||+||| +.+|+||||||+||+++.++ .+||+|||+|+
T Consensus 178 ~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~ 218 (345)
T 3hko_A 178 FSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218 (345)
T ss_dssp HHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCE
T ss_pred HHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccc
Confidence 99999999 88999999999999998766 89999999886
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=233.38 Aligned_cols=153 Identities=21% Similarity=0.291 Sum_probs=133.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++|||||++++++. +...+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~--~~~~l 259 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE--TKDAL 259 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe--eCCEE
Confidence 4567999999999999999999975 68899999997643 223456789999999999999999999987 44568
Q ss_pred EEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+++|||+++|++.+. ..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999976543 458999999999999 889999999999999999999999999998653
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 337 ~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~ 387 (576)
T 2acx_A 337 PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387 (576)
T ss_dssp CTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSC
T ss_pred ccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 8999999999999864
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=219.36 Aligned_cols=153 Identities=19% Similarity=0.257 Sum_probs=131.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..+.|...+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~ 86 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE--NK 86 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CS
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE--eC
Confidence 3456889999999999999999975 588999999976431 13567889999999999999999999987 44
Q ss_pred ccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC----ceEEcccc
Q 036266 224 KPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFN 287 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG 287 (312)
...+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 567889999999876554 469999999999999 89999999999999999877 89999999
Q ss_pred chhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|+.. |++++|+++|..|+..
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 164 LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp TCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 98652 8899999999998853
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=223.30 Aligned_cols=149 Identities=19% Similarity=0.273 Sum_probs=123.4
Q ss_pred cccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+...+.||+|+||.||+|... +++.||+|+++.......+.+.+|++++++++||||+++++++.. ....+++|||+
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~~~~lv~E~~ 168 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFES--KNDIVLVMEYV 168 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEEEEECC
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEE--CCEEEEEEeCC
Confidence 344678999999999999975 688999999987655566789999999999999999999999874 45678999999
Q ss_pred CCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee--CCCCceEEccccchhhh------
Q 036266 234 PNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL--DEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 234 ~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill--~~~~~~kl~DFG~a~~~------ 292 (312)
++|++. ++..++.|+++||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 988543 34568999999999999 8899999999999999 56789999999998753
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||.+
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 290 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999854
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.8e-29 Score=222.73 Aligned_cols=152 Identities=22% Similarity=0.252 Sum_probs=129.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.. ....+++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~lv 94 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILT--PTHLAII 94 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEee--CCEEEEE
Confidence 4567999999999999999999976 68899999997643 223567899999999999999999999874 4567899
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc--eEEccccchhhh---
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV--AHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~--~kl~DFG~a~~~--- 292 (312)
|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+..
T Consensus 95 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 95 MEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 999999976544 469999999999999 899999999999999987665 999999988742
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=222.88 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=118.3
Q ss_pred hhccccccceEeccC--CcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 150 QATDEFNEWHLLGTE--SLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
...++|+..+.||+| +||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||++++++.. ..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~ 99 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DN 99 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TT
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE--CC
Confidence 455689999999999 99999999976 68899999998654 3455678889999999999999999999884 45
Q ss_pred cEEEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 225 PWYLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
.++++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||.+
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccc
Confidence 67899999998866543 469999999999999 889999999999999999999999999875
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-29 Score=232.04 Aligned_cols=152 Identities=23% Similarity=0.335 Sum_probs=132.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++. ....++
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~--~~~~l~ 261 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE--TKTDLC 261 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--eCCEEE
Confidence 467888999999999999999975 68899999998653 223466889999999999999999999987 445689
Q ss_pred EEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|||+++|++.+. ..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~ 338 (543)
T 3c4z_A 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338 (543)
T ss_dssp EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence 99999999877543 358999999999999 88999999999999999999999999999865
Q ss_pred h------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++||+||+.||..
T Consensus 339 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~ 391 (543)
T 3c4z_A 339 LKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391 (543)
T ss_dssp CCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCC
Confidence 3 8999999999999864
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.8e-29 Score=222.58 Aligned_cols=153 Identities=15% Similarity=0.192 Sum_probs=126.5
Q ss_pred HhhhccccccceEeccCCcEEEEEEE------EcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC---CCceeeeeeee
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWI------FLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR---HRNLIKILTTI 218 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~ 218 (312)
+....++|...+.||+|+||.||+|. ..+++.||||+++... ..++.+|++++++++ |+||+++++++
T Consensus 60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 33456789999999999999999994 3357789999997543 345667777777776 99999999998
Q ss_pred eecccccEEEEecccCCCCHHHH-----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC----
Q 036266 219 AILILKPWYLSSCVMPNGDFPER-----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---- 277 (312)
Q Consensus 219 ~~~~~~~~~l~~~~~~~g~~~~~-----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---- 277 (312)
.. ....+++|||+++|++.+. +.++.|++.||+||| +.+||||||||+|||++.
T Consensus 137 ~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 137 LF--QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EC--SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTC
T ss_pred ec--CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccC
Confidence 74 4557899999999866543 469999999999999 899999999999999988
Q ss_pred -------CCceEEccccchhhh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 278 -------DMVAHVSDFNISKLL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 278 -------~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
++.+||+|||+|+.+ |++++||+||+.|+..
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999532 8999999999988753
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=211.26 Aligned_cols=154 Identities=25% Similarity=0.310 Sum_probs=131.6
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...++|+..+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++. +...
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~ 83 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH--DATR 83 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSE
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe--cCCE
Confidence 35678999999999999999999976 46789999997643 223466889999999999999999999987 4456
Q ss_pred EEEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
.+++|||+++|++. ....++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 78899999988554 34579999999999999 899999999999999999999999999987432
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 209 (279)
T 3fdn_A 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence 8899999999998764
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-29 Score=228.39 Aligned_cols=152 Identities=25% Similarity=0.356 Sum_probs=131.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|...+.||+|+||.||+|++. +++.||||++..... .....+.+|+.+++.++||||+++++++.. ...++
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~--~~~~~ 92 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST--PSDIF 92 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEE
Confidence 457899999999999999999976 688999999986532 234678899999999999999999999874 45678
Q ss_pred EEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++. +...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999988654 44579999999999999 899999999999999999999999999998653
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||.+
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 170 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 8888999999988864
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.8e-29 Score=218.00 Aligned_cols=161 Identities=27% Similarity=0.390 Sum_probs=124.4
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEcC-Cc---EEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFLD-ET---NVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTI 218 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 218 (312)
..+.....++|+..+.||+|+||.||+|.+.. ++ .||||+++... ....+.+.+|++++++++||||+++++++
T Consensus 15 ~~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp -CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred hhhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence 34445566789999999999999999999653 32 79999997642 34567789999999999999999999998
Q ss_pred eecccc----cEEEEecccCCCCHH------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC
Q 036266 219 AILILK----PWYLSSCVMPNGDFP------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD 276 (312)
Q Consensus 219 ~~~~~~----~~~l~~~~~~~g~~~------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~ 276 (312)
...... ..+++|||+++|++. ++.+++.|++.||+||| +.+|+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~ 171 (323)
T 3qup_A 95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLA 171 (323)
T ss_dssp ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEC
T ss_pred eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEc
Confidence 644322 347888999998654 34569999999999999 88999999999999999
Q ss_pred CCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 277 EDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 277 ~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+++.+||+|||+|+.. |++++|+++ |+.|+..
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 242 (323)
T 3qup_A 172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242 (323)
T ss_dssp TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 9999999999998652 889999999 8888764
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=215.70 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=131.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--~~~~~l 108 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT--RAGGLV 108 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE--CCcEEE
Confidence 57999999999999999999976 48889999997643 3345778999999999999999999999874 355789
Q ss_pred EecccCCCCHHHH----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 229 SSCVMPNGDFPER----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
+|||++++++.+. .+++.|++.||+||| +.+|+||||||+||+++.++.+||+++|.....
T Consensus 109 v~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di 185 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDI 185 (286)
T ss_dssp EEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHH
T ss_pred EEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHH
Confidence 9999998866544 469999999999999 889999999999999999999999988875443
Q ss_pred ---hhhhhhhhcCCCCCcc
Q 036266 293 ---GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||.+
T Consensus 186 ~slG~il~elltg~~Pf~~ 204 (286)
T 3uqc_A 186 RGIGASLYALLVNRWPLPE 204 (286)
T ss_dssp HHHHHHHHHHHHSEECSCC
T ss_pred HHHHHHHHHHHHCCCCCCc
Confidence 9999999999999865
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=224.48 Aligned_cols=154 Identities=24% Similarity=0.280 Sum_probs=133.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|...+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++........+++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467899999999999999999976 48899999998643 3345667899999999999999999999887666678999
Q ss_pred ecccCCCCH---------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee----CCCCceEEccccchh
Q 036266 230 SCVMPNGDF---------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL----DEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~---------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill----~~~~~~kl~DFG~a~ 290 (312)
|||+++|++ .++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999998744 445679999999999999 8899999999999999 778889999999985
Q ss_pred hh-------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL-------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~-------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|++||+.||..
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp ECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred EccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 42 8899999999999853
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.2e-29 Score=220.36 Aligned_cols=152 Identities=23% Similarity=0.286 Sum_probs=129.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~~~ 130 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAW 130 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--CCeEE
Confidence 356888999999999999999964 68889999997532 3445678899999999999999999999874 45678
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||++++ ++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 131 lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 131 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 888899743 34556679999999999999 889999999999999999999999999998642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+.+
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 208 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888753
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=217.72 Aligned_cols=154 Identities=24% Similarity=0.276 Sum_probs=134.4
Q ss_pred hccccccceEeccCCcEEEEEEEE-----cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-----LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 346789999999999999999984 256789999998766666677999999999999999999999987666777
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||++++++.+ +..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 899999999986644 4469999999999999 899999999999999999999999999998642
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|..|+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 231 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC 231 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 888888999888864
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.7e-29 Score=221.79 Aligned_cols=152 Identities=24% Similarity=0.348 Sum_probs=127.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.++|+..+.||+|+||.||+|.+. +++.||||+++... ......+.+|+.++++++||||+++++++.. ..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--~~ 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--SL 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--SS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec--CC
Confidence 467889999999999999999843 35679999997532 4455678899999999999999999999873 44
Q ss_pred cEEEEecccCCCCHHH-------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC---ceE
Q 036266 225 PWYLSSCVMPNGDFPE-------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM---VAH 282 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~-------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~---~~k 282 (312)
..+++|||+++|++.+ ++.++.|+++||+||| +.+|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEE
Confidence 5688889999886644 3469999999999999 88999999999999999554 599
Q ss_pred Eccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 283 VSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 283 l~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|+|||+|+.. |++++|++| |..|++.
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999742 888899998 8888764
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=215.15 Aligned_cols=152 Identities=21% Similarity=0.240 Sum_probs=129.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR--KRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--CCeEEE
Confidence 357899999999999999999975 58899999986543 3345668899999999999999999999874 456788
Q ss_pred EecccCCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||++++++ .....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 8899988744 445579999999999999 889999999999999999999999999988542
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|++.
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888754
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=220.21 Aligned_cols=155 Identities=22% Similarity=0.296 Sum_probs=129.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.... .
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3467999999999999999999975 57889999997532 344567889999999999999999999986433 2
Q ss_pred ccEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 224 KPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
...+++|||++++ +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 103 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 3678999999864 34455679999999999999 889999999999999999999999999998653
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 180 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 180 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp ----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=210.96 Aligned_cols=153 Identities=24% Similarity=0.299 Sum_probs=132.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|+..+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++. .....+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 84 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE--DNTDIYLV 84 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe--cCCeEEEE
Confidence 3467899999999999999999976 46789999998765555678899999999999999999999987 44567889
Q ss_pred ecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhhh--
Q 036266 230 SCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 230 ~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~~-- 292 (312)
|||++++++.+ ...++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 85 MELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 99999986644 4579999999999999 8899999999999999 78899999999988542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 162 ~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 162 GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp TSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCC
Confidence 8899999999999864
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=220.34 Aligned_cols=162 Identities=20% Similarity=0.273 Sum_probs=134.5
Q ss_pred hHHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh-----------hHhHHHHHHHHHHhhcCCCCcee
Q 036266 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL-----------ERAFRSFDSKCEVHKNVRHRNLI 212 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv 212 (312)
...++....++|...+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3456677889999999999999999999998889999999986432 22346789999999999999999
Q ss_pred eeeeeeeec---ccccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 213 KILTTIAIL---ILKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 213 ~~~~~~~~~---~~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
++++++... ....++++|||++++ ++.....++.|++.||+||| +.+|+||||||+||+++.
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 999998542 334678999999843 45566689999999999999 889999999999999999
Q ss_pred CCceEEccccchhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 278 DMVAHVSDFNISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 278 ~~~~kl~DFG~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
++.+||+|||+|+.. |++++|+++|+.|+..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp TCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 999999999998642 7888888888888754
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=211.82 Aligned_cols=152 Identities=27% Similarity=0.349 Sum_probs=130.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.+.|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....+++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~~~lv 98 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE--DYHNMYIV 98 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee--cCCeEEEE
Confidence 457889999999999999999975 57889999998654 334567899999999999999999999987 44567899
Q ss_pred ecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchh
Q 036266 230 SCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~ 290 (312)
|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 99999986644 3469999999999999 8899999999999999 456789999999986
Q ss_pred hh----------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.||.+
T Consensus 176 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~ 227 (285)
T 3is5_A 176 LFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG 227 (285)
T ss_dssp C----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence 42 8899999999999864
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=225.95 Aligned_cols=153 Identities=29% Similarity=0.432 Sum_probs=132.3
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...++|+..+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++... ...++++
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-TSCEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-CCceEEE
Confidence 45578889999999999999999874 7789999998643 456789999999999999999999987643 2357899
Q ss_pred ecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||+++|++.+ .+.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999986644 3469999999999999 889999999999999999999999999998642
Q ss_pred ------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.|++.+
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 390 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 390 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTS
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 899999998 99998754
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=213.13 Aligned_cols=162 Identities=30% Similarity=0.459 Sum_probs=136.7
Q ss_pred CCchHHHHhhhccccccc------eEeccCCcEEEEEEEEcCCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCCCc
Q 036266 141 KRTSYLDILQATDEFNEW------HLLGTESLGSVYKWIFLDETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRHRN 210 (312)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~n 210 (312)
..+++.++..++.+|... +.||+|+||.||+|.. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 345667777788777766 8999999999999986 67889999986532 344577899999999999999
Q ss_pred eeeeeeeeeecccccEEEEecccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee
Q 036266 211 LIKILTTIAILILKPWYLSSCVMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL 275 (312)
Q Consensus 211 iv~~~~~~~~~~~~~~~l~~~~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill 275 (312)
|+++++++.. ....+++|||+++|++.+ +..++.|++.||+||| +.+|+||||||+||++
T Consensus 92 i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 92 LVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp BCCEEEEECS--SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred eEEEEEEEec--CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 9999999874 446788888998886544 4569999999999999 8899999999999999
Q ss_pred CCCCceEEccccchhhh-------------------------------------hhhhhhhhcCCCCCcc
Q 036266 276 DEDMVAHVSDFNISKLL-------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 276 ~~~~~~kl~DFG~a~~~-------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.++.+||+|||+++.. |++++|+++|+.|+.+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 236 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCccc
Confidence 99999999999987531 8899999999999864
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-28 Score=227.34 Aligned_cols=155 Identities=26% Similarity=0.436 Sum_probs=133.2
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.....++|+..+.||+|+||.||+|.+..+..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~~ 254 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIY 254 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCE
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---CceE
Confidence 345567889999999999999999998877789999998643 234678999999999999999999998763 4578
Q ss_pred EEecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 228 LSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++|||+++|++.+ .+.++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+|+..
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999986644 4469999999999999 899999999999999999999999999998752
Q ss_pred ------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.|++++
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 889999999 89898754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=1.7e-28 Score=216.72 Aligned_cols=151 Identities=28% Similarity=0.409 Sum_probs=123.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.++|+..+.||+|+||.||+|++. +++ .||+|.+.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS---S
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC---C
Confidence 457899999999999999999964 343 36888876433 34557789999999999999999999998743 3
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++++++++|++.+ ++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 567788999886544 4569999999999999 889999999999999999999999999998753
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+..
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 222 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccC
Confidence 888999999 8988864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-29 Score=231.17 Aligned_cols=156 Identities=27% Similarity=0.439 Sum_probs=133.9
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
......+|+..+.||+|+||.||+|.+.. +..||||.++... ...+.+.+|++++++++||||+++++++. ....+
T Consensus 215 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~ 291 (495)
T 1opk_A 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--REPPF 291 (495)
T ss_dssp CBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSSC
T ss_pred cccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe--cCCcE
Confidence 33455678889999999999999999864 7889999997653 23567899999999999999999999987 34567
Q ss_pred EEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 227 YLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+++|||+++|++.+. +.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceec
Confidence 889999999866544 468999999999999 889999999999999999999999999998752
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |..|++..
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 899999999 88888653
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.7e-28 Score=213.73 Aligned_cols=151 Identities=22% Similarity=0.320 Sum_probs=131.2
Q ss_pred cccceEeccCCcEEEEEEEEc-----CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 155 FNEWHLLGTESLGSVYKWIFL-----DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
|+..+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.......+++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999988653 56789999998654 345677899999999999999999999998766677899
Q ss_pred EecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 229 SSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 229 ~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+|||+++|++. ++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 99999998654 45579999999999999 889999999999999999999999999988642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||..|+..
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 8899999999888753
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=220.81 Aligned_cols=154 Identities=29% Similarity=0.400 Sum_probs=129.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIA 219 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 219 (312)
...++|...+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34568899999999999999999853 22469999997653 44557789999999999 8999999999987
Q ss_pred ecccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 220 ILILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
. ....+++|||+++|++.+ +++++.|++.||+||| +.+|+||||||+
T Consensus 146 ~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 220 (382)
T 3tt0_A 146 Q--DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 220 (382)
T ss_dssp S--SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGG
T ss_pred c--CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcc
Confidence 4 455788889999876543 4578999999999999 889999999999
Q ss_pred CeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 272 NNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
||+++.++.+||+|||+|+.. |++++|++| |..|+++
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999998632 888888888 8888764
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=217.87 Aligned_cols=151 Identities=23% Similarity=0.320 Sum_probs=120.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..+.|+..+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++.. ....+++
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFET--PTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEec--CCeEEEE
Confidence 4567899999999999999999976 57889999998643 34567889999999999999999999874 4567899
Q ss_pred ecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccchhhh--
Q 036266 230 SCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNISKLL-- 292 (312)
Q Consensus 230 ~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a~~~-- 292 (312)
|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 127 LELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp ECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999986644 4579999999999999 889999999999999975 889999999998753
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 204 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 204 QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988753
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-29 Score=220.09 Aligned_cols=151 Identities=21% Similarity=0.286 Sum_probs=125.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++. .....+++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH--TEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE--CSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe--eCCEEEEEe
Confidence 57889999999999999999976 688999999975432 22224567999999999999999999987 445678889
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||+++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 156 (324)
T 3mtl_A 80 EYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 156 (324)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc
Confidence 999842 34555679999999999999 889999999999999999999999999987532
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888754
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=214.63 Aligned_cols=154 Identities=26% Similarity=0.316 Sum_probs=130.8
Q ss_pred hhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
...++|...+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 97 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ-- 97 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec--
Confidence 34567889999999999999999862 34679999997643 4455778999999999999999999999874
Q ss_pred cccEEEEecccCCCCHHH------------------------------------HHHHHHHHHHHHHHHhCCCCCCceec
Q 036266 223 LKPWYLSSCVMPNGDFPE------------------------------------RLNIMIDMALAFEYLHHGRSTPMVHC 266 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~------------------------------------~~~i~~~i~~~l~ylH~~~~~~iiHr 266 (312)
....+++|||+++|++.+ .++++.|+++||+||| +.+|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccc
Confidence 455788889999876543 3468999999999999 8899999
Q ss_pred CCCCCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCc
Q 036266 267 DLKPSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTI 307 (312)
Q Consensus 267 Dlkp~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~ 307 (312)
||||+||+++.++.+||+|||+++.. |++++|++| |..|++
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999988532 889999999 988886
Q ss_pred c
Q 036266 308 E 308 (312)
Q Consensus 308 e 308 (312)
.
T Consensus 255 ~ 255 (314)
T 2ivs_A 255 G 255 (314)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=221.24 Aligned_cols=154 Identities=23% Similarity=0.334 Sum_probs=124.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..+.|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.... .
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 3467899999999999999999975 68899999996432 344567889999999999999999999986432 2
Q ss_pred ccEEEEecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 224 KPWYLSSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
..++++|||+ ++++. ....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 4568899998 55544 44569999999999999 889999999999999999999999999998652
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999998864
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-28 Score=217.75 Aligned_cols=156 Identities=22% Similarity=0.332 Sum_probs=129.3
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeee
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAI 220 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 220 (312)
....++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 345678999999999999999999962 34579999997543 33456789999999999 89999999999874
Q ss_pred cccccEEEEecccCCCCHHH-----------------------------------HHHHHHHHHHHHHHHhCCCCCCcee
Q 036266 221 LILKPWYLSSCVMPNGDFPE-----------------------------------RLNIMIDMALAFEYLHHGRSTPMVH 265 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~-----------------------------------~~~i~~~i~~~l~ylH~~~~~~iiH 265 (312)
....+++|||+++|++.+ ++.++.|++.||+||| +.+|+|
T Consensus 121 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 195 (344)
T 1rjb_A 121 --SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVH 195 (344)
T ss_dssp --SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred --CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 445788899999876644 3458999999999999 889999
Q ss_pred cCCCCCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCC
Q 036266 266 CDLKPSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPT 306 (312)
Q Consensus 266 rDlkp~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~ 306 (312)
|||||+||+++.++.+||+|||+++.. |++++|++| |..|+
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999998642 888889998 88888
Q ss_pred ccc
Q 036266 307 IEM 309 (312)
Q Consensus 307 ~e~ 309 (312)
++.
T Consensus 276 ~~~ 278 (344)
T 1rjb_A 276 PGI 278 (344)
T ss_dssp TTC
T ss_pred ccC
Confidence 653
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=213.56 Aligned_cols=137 Identities=21% Similarity=0.296 Sum_probs=115.1
Q ss_pred ccccccceEeccCCcEEEEEEEE-----cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIF-----LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.......
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 34588899999999999999984 257789999997543 334567889999999999999999999998666677
Q ss_pred EEEEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccc
Confidence 8999999999876554 469999999999999 89999999999999999999999999998854
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-28 Score=217.99 Aligned_cols=152 Identities=20% Similarity=0.260 Sum_probs=132.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....+++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--CCEEEEE
Confidence 467999999999999999999976 68889999997653 4455778999999999999999999999874 4567899
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||++++++.+. ..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999877554 369999999999999 64 8999999999999999999999999998653
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||+.
T Consensus 187 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp ----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-28 Score=219.72 Aligned_cols=160 Identities=23% Similarity=0.284 Sum_probs=133.8
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILT 216 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~ 216 (312)
........++|+..+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++ +||||+++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 4455567789999999999999999999842 34679999997643 34456789999999999 7999999999
Q ss_pred eeeecccccEEEEecccCCCCHHH--------------------------------------------------------
Q 036266 217 TIAILILKPWYLSSCVMPNGDFPE-------------------------------------------------------- 240 (312)
Q Consensus 217 ~~~~~~~~~~~l~~~~~~~g~~~~-------------------------------------------------------- 240 (312)
++.... ...+++|||+++|++.+
T Consensus 94 ~~~~~~-~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 94 ACTKPG-GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EECSTT-SCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeecCC-CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 987533 34788889999865543
Q ss_pred ----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 241 ----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 241 ----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
.+.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 3458999999999999 889999999999999999999999999998642
Q ss_pred --------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|++.
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 298 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCc
Confidence 889999998 9998865
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=221.06 Aligned_cols=152 Identities=21% Similarity=0.244 Sum_probs=125.0
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec-------
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL------- 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------- 221 (312)
...++|+..+.||+|+||.||+|... +++.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 45678999999999999999999974 688999999975432 234799999999999999999988542
Q ss_pred -----------------------------ccccEEEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhC
Q 036266 222 -----------------------------ILKPWYLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHH 257 (312)
Q Consensus 222 -----------------------------~~~~~~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~ 257 (312)
....++++|||++++ ++.....++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH- 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH- 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 234578999999853 23445579999999999999
Q ss_pred CCCCCceecCCCCCCeeeC-CCCceEEccccchhhh------------------------------------hhhhhhhh
Q 036266 258 GRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL------------------------------------GVLLPETF 300 (312)
Q Consensus 258 ~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~------------------------------------g~~~~e~~ 300 (312)
+.+|+||||||+||+++ .++.+||+|||+|+.+ |++++|++
T Consensus 159 --~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 159 --SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp --TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred --HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 89999999999999998 6899999999999753 88899999
Q ss_pred cCCCCCcc
Q 036266 301 TRKKPTIE 308 (312)
Q Consensus 301 tg~~p~~e 308 (312)
+|+.||++
T Consensus 237 ~g~~pf~~ 244 (383)
T 3eb0_A 237 LGKPLFSG 244 (383)
T ss_dssp HSSCSSCC
T ss_pred hCCCCCCC
Confidence 99988864
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=209.16 Aligned_cols=155 Identities=23% Similarity=0.342 Sum_probs=132.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++........+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3568899999999999999999975 68889999997543 34556789999999999999999999988765667789
Q ss_pred EEecccCCCCHH----------------HHHHHHHHHHHHHHHHhCCCCCC-----ceecCCCCCCeeeCCCCceEEccc
Q 036266 228 LSSCVMPNGDFP----------------ERLNIMIDMALAFEYLHHGRSTP-----MVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 228 l~~~~~~~g~~~----------------~~~~i~~~i~~~l~ylH~~~~~~-----iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
++|||++++++. ....++.|++.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 999999987554 34569999999999999 666 999999999999999999999999
Q ss_pred cchhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|++||+.|+..
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 218 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 218 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 998652 8889999999988764
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=223.92 Aligned_cols=150 Identities=23% Similarity=0.267 Sum_probs=125.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----ccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~ 226 (312)
...|+..+.||+|+||.||+|++. +++.||||++.... ....+|++++++++|||||++++++... +..++
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 446888999999999999999985 58899999997542 2234799999999999999999988532 33457
Q ss_pred EEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccchh
Q 036266 227 YLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a~ 290 (312)
+++|||++++ ++.....++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+|+
T Consensus 129 ~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 7899999864 33445678999999999999 8999999999999999954 678999999997
Q ss_pred hh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.+ |++++||++|+.||++
T Consensus 206 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~ 259 (420)
T 1j1b_A 206 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259 (420)
T ss_dssp ECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 52 8999999999999864
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=226.83 Aligned_cols=139 Identities=22% Similarity=0.351 Sum_probs=109.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec---ccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL---ILK 224 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~~~ 224 (312)
..++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++|||||++++++... ...
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3467999999999999999999975 68899999996532 34557788999999999999999999998543 235
Q ss_pred cEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.++++|||+++. +......++.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+..
T Consensus 131 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 689999988632 34455679999999999999 889999999999999999999999999999754
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=216.84 Aligned_cols=139 Identities=26% Similarity=0.340 Sum_probs=111.5
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
....++|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 107 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--NHR 107 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE--TTE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec--CCE
Confidence 345678999999999999999999965 67889999997543 2334567889999999999999999999874 456
Q ss_pred EEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee-----CCCCceEEccccch
Q 036266 226 WYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL-----DEDMVAHVSDFNIS 289 (312)
Q Consensus 226 ~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill-----~~~~~~kl~DFG~a 289 (312)
.+++|||+++. +..+...++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|
T Consensus 108 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 108 LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 78888899842 34445679999999999999 8899999999999999 45566999999998
Q ss_pred hhh
Q 036266 290 KLL 292 (312)
Q Consensus 290 ~~~ 292 (312)
+..
T Consensus 185 ~~~ 187 (329)
T 3gbz_A 185 RAF 187 (329)
T ss_dssp HHH
T ss_pred ccc
Confidence 753
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-28 Score=235.30 Aligned_cols=153 Identities=21% Similarity=0.263 Sum_probs=131.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|.+++..+ +||+|+++++++. +...
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~--~~~~ 416 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ--TMDR 416 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB--CSSE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE--eCCE
Confidence 3467899999999999999999975 57889999998643 23445678899999887 6999999999987 4456
Q ss_pred EEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++++|||+++|++... ..|+.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+..
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 8899999999977544 459999999999999 889999999999999999999999999998752
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 494 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence 8999999999999864
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-28 Score=219.52 Aligned_cols=138 Identities=18% Similarity=0.289 Sum_probs=117.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc-----
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----- 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----- 222 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 3468999999999999999999974 68899999986543 223456789999999999999999999987543
Q ss_pred -cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 223 -LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 223 -~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
...++++|||++++ ++.+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 34578999999852 56677789999999999999 889999999999999999999999999987
Q ss_pred hh
Q 036266 290 KL 291 (312)
Q Consensus 290 ~~ 291 (312)
+.
T Consensus 172 ~~ 173 (351)
T 3mi9_A 172 RA 173 (351)
T ss_dssp EE
T ss_pred cc
Confidence 53
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=215.78 Aligned_cols=153 Identities=24% Similarity=0.348 Sum_probs=129.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 100 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK--KKRWY 100 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec--CCEEE
Confidence 4568999999999999999999976 48899999986543 3345667899999999999999999999874 45678
Q ss_pred EEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++++ +.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 8899998764 4455679999999999999 889999999999999999999999999998652
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|++.
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPG 227 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7888888888888754
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-28 Score=207.87 Aligned_cols=154 Identities=23% Similarity=0.346 Sum_probs=131.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|+..+.||+|+||.||+|++. ++.||||++.... ....+.+.+|+.++++++||||+++++++........++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3467899999999999999999974 7889999997643 345567899999999999999999999988665577889
Q ss_pred EecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||+++|++. ++..++.|++.||+||| +.+ |+||||||+||+++.++.++++|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 99999987554 45579999999999999 777 999999999999999999999988865331
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 164 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 164 QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred cccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 8899999999999864
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=230.37 Aligned_cols=155 Identities=26% Similarity=0.434 Sum_probs=133.8
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.....++|+..+.||+|+||.||+|.+..+..||||+++... ...+.+.+|++++++++||||+++++++.. ...+
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~ 337 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIY 337 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee---ccce
Confidence 344567788899999999999999998877789999998643 234678999999999999999999998763 4578
Q ss_pred EEecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 228 LSSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 228 l~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
++|||+++|++. +.++++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+++..
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999988654 34579999999999999 899999999999999999999999999998752
Q ss_pred ------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||+++
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 889999999 89898754
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-28 Score=208.37 Aligned_cols=153 Identities=24% Similarity=0.379 Sum_probs=131.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh---HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE---RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 86 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED--SNYV 86 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC--SSEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc--CCeE
Confidence 4467999999999999999999974 688999999976431 234678899999999999999999999874 4567
Q ss_pred EEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||++++++ .+...++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 888999988754 445579999999999999 889999999999999999999999999987642
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 214 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=214.94 Aligned_cols=150 Identities=21% Similarity=0.368 Sum_probs=131.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|... +++.||||+++... .+.+.+|++++++++ ||||+++++++........+++
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 467999999999999999999864 68899999997532 356889999999997 9999999999987667778999
Q ss_pred ecccCCCCHHH---------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhhh-------
Q 036266 230 SCVMPNGDFPE---------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL------- 292 (312)
Q Consensus 230 ~~~~~~g~~~~---------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~~------- 292 (312)
|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+|+..
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 99999997654 4579999999999999 88999999999999999766 8999999998642
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 889999999999873
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-28 Score=213.24 Aligned_cols=153 Identities=16% Similarity=0.268 Sum_probs=132.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...+|...+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|+.++++++||||+++++++. +....
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~~ 116 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE--DNDFV 116 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe--cCCeE
Confidence 4567999999999999999999976 47789999997643 345567889999999999999999999987 44568
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||++++++.+ ...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 117 ~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 193 (335)
T 2owb_A 117 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 193 (335)
T ss_dssp EEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceeccc
Confidence 89999999886544 4569999999999999 889999999999999999999999999998642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 194 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 194 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 8899999999999864
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.3e-28 Score=207.50 Aligned_cols=153 Identities=22% Similarity=0.371 Sum_probs=130.0
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~ 81 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ--EESFHY 81 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE--cCCEEE
Confidence 3567999999999999999999975 58899999997643 344567889999999999999999999987 445678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc---eEEccccchhhh
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV---AHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~---~kl~DFG~a~~~ 292 (312)
++|||++++++.+ ...++.|++.|++||| +.+|+||||||+||+++.++. +||+|||++...
T Consensus 82 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 8999999986643 4469999999999999 889999999999999986554 999999988442
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp CSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 8888999999988743
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.1e-28 Score=208.73 Aligned_cols=153 Identities=16% Similarity=0.268 Sum_probs=132.0
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...+|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++. .....
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~ 90 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE--DNDFV 90 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec--cCCEE
Confidence 4467899999999999999999976 47889999997643 344567889999999999999999999987 44567
Q ss_pred EEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||++++++. +...++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 167 (294)
T 2rku_A 91 FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY 167 (294)
T ss_dssp EEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence 8899999988554 44569999999999999 889999999999999999999999999988642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 217 (294)
T 2rku_A 168 DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217 (294)
T ss_dssp TTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-29 Score=224.47 Aligned_cols=151 Identities=19% Similarity=0.263 Sum_probs=121.5
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCC---------CCceee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVR---------HRNLIK 213 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~ 213 (312)
..++|+..+.||+|+||.||+|++ +++.||||+++... ....+.+.+|++++++++ |||||+
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 456799999999999999999997 67899999998642 123367888999988886 666666
Q ss_pred eeeee-----------------eec-----------ccccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHH
Q 036266 214 ILTTI-----------------AIL-----------ILKPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEY 254 (312)
Q Consensus 214 ~~~~~-----------------~~~-----------~~~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~y 254 (312)
+.+.+ ... ....++++|||+++| +..+...++.|++.||+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 55543 210 256789999999887 456778899999999999
Q ss_pred HhCCCCCCceecCCCCCCeeeCCCC--------------------ceEEccccchhhh---------hhhhhhhhcCCC
Q 036266 255 LHHGRSTPMVHCDLKPSNNLLDEDM--------------------VAHVSDFNISKLL---------GVLLPETFTRKK 304 (312)
Q Consensus 255 lH~~~~~~iiHrDlkp~Nill~~~~--------------------~~kl~DFG~a~~~---------g~~~~e~~tg~~ 304 (312)
||+ +.+|+||||||+|||++.++ .+||+|||+|+.. .|++||++.|..
T Consensus 177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~ 253 (336)
T 2vuw_A 177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG 253 (336)
T ss_dssp HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS
T ss_pred HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC
Confidence 993 36799999999999999877 8999999999875 578888887654
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-28 Score=210.41 Aligned_cols=154 Identities=20% Similarity=0.318 Sum_probs=124.0
Q ss_pred hhhccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
....++|+..+.||+|+||.||+|.+.. +..||+|.++... ....+.+.+|+.++++++||||+++++++. .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~ 87 (281)
T 1mp8_A 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT---E 87 (281)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC---S
T ss_pred EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc---c
Confidence 3456789999999999999999998743 3469999987543 445567899999999999999999999874 2
Q ss_pred ccEEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 224 KPWYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
...+++|||+++|++. +.+.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcccccc
Confidence 3567889999987554 44568999999999999 8899999999999999999999999999886
Q ss_pred hh-------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 291 LL-------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 291 ~~-------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
.. |++++|+++ |..|+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~ 220 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCc
Confidence 42 888889886 8888754
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-28 Score=211.06 Aligned_cols=154 Identities=22% Similarity=0.275 Sum_probs=130.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|...+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||+++++++........
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 467999999999999999999975 57889999998643 2345678999999999999999999999865566678
Q ss_pred EEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||++++ ++.+...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 9999999876 34556679999999999999 889999999999999999999999999987531
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8888888898888754
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=9e-29 Score=219.32 Aligned_cols=153 Identities=22% Similarity=0.320 Sum_probs=129.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh--------HhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE--------RAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
..++|+..+.||+|+||.||+|++. +++.||||+++.... .....+.+|++++++++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~-- 99 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE-- 99 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE--
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--
Confidence 4568999999999999999999965 578899999976431 13345678999999999999999999987
Q ss_pred ccccEEEEecccCCC-CH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 222 ILKPWYLSSCVMPNG-DF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g-~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
.....+++|||+..| ++ ..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 445678888888776 44 445579999999999999 88999999999999999999999999999
Q ss_pred hhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
++.. |++++|+++|+.||.+
T Consensus 177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 8642 8888888888888754
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.8e-28 Score=208.99 Aligned_cols=136 Identities=20% Similarity=0.327 Sum_probs=112.0
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhc--CCCCceeeeeeeeeec--ccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKN--VRHRNLIKILTTIAIL--ILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~--~~~~~ 226 (312)
..++|+..+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++... .....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 356899999999999999999987 68889999997543 2344556666555 8999999999986532 34568
Q ss_pred EEEecccCCCCHHH-----------HHHHHHHHHHHHHHHhCC-----CCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGDFPE-----------RLNIMIDMALAFEYLHHG-----RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~-----~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|||+++|++.+ +++++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+|+
T Consensus 82 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 89999999986654 457999999999999942 25789999999999999999999999999874
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-28 Score=206.93 Aligned_cols=152 Identities=26% Similarity=0.395 Sum_probs=131.1
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.. ....+++|
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~ 82 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVT 82 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECS--SSSCEEEE
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcc--CCCeEEEE
Confidence 3467889999999999999999988888899999986532 33678899999999999999999999874 45678899
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
||++++++.+ ...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 9999886544 4469999999999999 889999999999999999999999999998742
Q ss_pred --------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 788888888 7888754
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=225.54 Aligned_cols=153 Identities=25% Similarity=0.404 Sum_probs=131.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++. ....++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~ 97 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE--DSSSFY 97 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE--cCCEEE
Confidence 3467999999999999999999975 68899999997643 234567889999999999999999999987 455688
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~a~~~ 292 (312)
++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++ .++.+||+|||+|+.+
T Consensus 98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 9999999997644 3469999999999999 88999999999999995 4568999999998742
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 175 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 175 QQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp CCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999998854
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-28 Score=225.41 Aligned_cols=153 Identities=25% Similarity=0.358 Sum_probs=132.1
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++. .....
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~ 101 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE--DKGYF 101 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE--eCCEE
Confidence 3457899999999999999999976 68899999997543 334567899999999999999999999987 45568
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhh
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~ 291 (312)
+++|||+.+|++.+ ...++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+.
T Consensus 102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 89999999987654 3469999999999999 8899999999999999 4678999999999875
Q ss_pred h----------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++|+++|..||..
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 229 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNG 229 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence 3 8889999999999864
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=206.26 Aligned_cols=153 Identities=20% Similarity=0.242 Sum_probs=130.4
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~~ 227 (312)
..|...+.||+|+||.||+|.+. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++... ....++
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34777889999999999999975 57789999997643 44567789999999999999999999988643 345689
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeC-CCCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLD-EDMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~ 292 (312)
++|||+++|++.+. ..++.|++.||+||| +.+ |+||||||+||+++ +++.+||+|||+++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999866544 468999999999999 777 99999999999998 7899999999998642
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999865
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=213.41 Aligned_cols=134 Identities=22% Similarity=0.230 Sum_probs=110.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||+||+|++. +++.||||++.... .........|+..+.++ +||||+++++++. .....++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~--~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE--EGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE--ETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE--eCCEEEE
Confidence 57999999999999999999976 68899999986532 23334455566655554 8999999999987 4456788
Q ss_pred EecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 229 SSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 229 ~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
+|||+.+. ++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 135 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~ 206 (311)
T 3p1a_A 135 QTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE 206 (311)
T ss_dssp EEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred EEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence 88998542 45566789999999999999 88999999999999999999999999998754
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=213.13 Aligned_cols=140 Identities=25% Similarity=0.369 Sum_probs=118.7
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
+.....++|+..+.||+|+||.||+|.+. +++.||||.+.... ......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 34456678999999999999999999864 35679999997543 344567889999999999999999999987
Q ss_pred ecccccEEEEecccCCCCHHH----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC
Q 036266 220 ILILKPWYLSSCVMPNGDFPE----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE 277 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~ 277 (312)
. ....+++|||+++|++.+ +++++.|++.||+||| +.+|+||||||+||+++.
T Consensus 99 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 99 Q--GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAE 173 (322)
T ss_dssp S--SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECT
T ss_pred c--CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcC
Confidence 4 446788899999986644 3458999999999999 889999999999999999
Q ss_pred CCceEEccccchhh
Q 036266 278 DMVAHVSDFNISKL 291 (312)
Q Consensus 278 ~~~~kl~DFG~a~~ 291 (312)
++.+||+|||+++.
T Consensus 174 ~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 174 DFTVKIGDFGMTRD 187 (322)
T ss_dssp TCCEEECCTTCCCG
T ss_pred CCeEEECcCccccc
Confidence 99999999998864
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=216.67 Aligned_cols=158 Identities=21% Similarity=0.288 Sum_probs=131.5
Q ss_pred hHHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-----CCceeeeeee
Q 036266 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-----HRNLIKILTT 217 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~~~~~ 217 (312)
++.+.....++|...+.||+|+||.||+|++. +++.||||+++.. ....+.+..|++++++++ ||||++++++
T Consensus 26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 34444556678999999999999999999975 6788999999753 334456778999998886 9999999999
Q ss_pred eeecccccEEEEecccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC------
Q 036266 218 IAILILKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE------ 277 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~------ 277 (312)
+.. ....+++|||+ ++++ .+...++.|++.||+||| +.+|+||||||+|||++.
T Consensus 105 ~~~--~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 105 FMY--YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEE--TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEE
T ss_pred eeE--CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccc
Confidence 874 34678889998 6654 344569999999999999 899999999999999975
Q ss_pred -------------------CCceEEccccchhhh---------------------------------hhhhhhhhcCCCC
Q 036266 278 -------------------DMVAHVSDFNISKLL---------------------------------GVLLPETFTRKKP 305 (312)
Q Consensus 278 -------------------~~~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p 305 (312)
++.+||+|||+|+.. |++++|++||+.|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 789999999998742 8899999999999
Q ss_pred Ccc
Q 036266 306 TIE 308 (312)
Q Consensus 306 ~~e 308 (312)
|..
T Consensus 259 f~~ 261 (360)
T 3llt_A 259 FRT 261 (360)
T ss_dssp CCC
T ss_pred CCC
Confidence 853
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=5e-28 Score=208.72 Aligned_cols=152 Identities=22% Similarity=0.441 Sum_probs=131.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...++|+..+.||+|+||.||+|...+++.||||.+.... ...+.+.+|++++++++||||+++++++.. ...+++
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~v 85 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPIYII 85 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC---CCcEEE
Confidence 4457899999999999999999998778889999997643 234678899999999999999999998752 346888
Q ss_pred ecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||++++++. +.+.++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++..
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999988654 34579999999999999 889999999999999999999999999988642
Q ss_pred ----------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ----------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.|+++
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 889999999 8888864
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-28 Score=221.73 Aligned_cols=153 Identities=27% Similarity=0.385 Sum_probs=127.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAI 220 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 220 (312)
...++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999975 57899999997642 1122347899999999999999999999753
Q ss_pred cccccEEEEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEcc
Q 036266 221 LILKPWYLSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSD 285 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~D 285 (312)
...+++|||+++|+ +.+...++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|
T Consensus 212 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 ---EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp ---SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred ---CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEee
Confidence 23689999999884 4556689999999999999 8899999999999999754 4599999
Q ss_pred ccchhhh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 286 FNISKLL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 286 FG~a~~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
||+|+.. |++++|++||+.||.+
T Consensus 286 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 346 (419)
T 3i6u_A 286 FGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346 (419)
T ss_dssp SSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 9998653 8888999999999864
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=218.62 Aligned_cols=155 Identities=16% Similarity=0.135 Sum_probs=125.6
Q ss_pred hccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhhhHh-----------HHHHHHHHHHhhcCCCCceee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQLERA-----------FRSFDSKCEVHKNVRHRNLIK 213 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 213 (312)
..++|...+.||+|+||.||+|.+.. ++.||||++....... ...+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 44589999999999999999998754 3679999987543211 122445667788899999999
Q ss_pred eeeeeeecc--cccEEEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--
Q 036266 214 ILTTIAILI--LKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-- 276 (312)
Q Consensus 214 ~~~~~~~~~--~~~~~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-- 276 (312)
+++++.... ....+++|||+ ++++ .+++.++.|++.||+||| +.+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 999986532 35688999999 6644 455679999999999999 88999999999999999
Q ss_pred CCCceEEccccchhhh-------------------------------------------hhhhhhhhcCCCCCccc
Q 036266 277 EDMVAHVSDFNISKLL-------------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 277 ~~~~~kl~DFG~a~~~-------------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
.++.+||+|||+|+.+ |++++|++||+.||.+.
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 8899999999998431 89999999999999853
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.1e-28 Score=208.74 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=116.8
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-C-------cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-E-------TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
.++|...+.||+|+||.||+|.... + +.||+|++........+.+.+|++++++++||||+++++++.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--G 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC--T
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe--C
Confidence 4678899999999999999998653 3 4699999987666667789999999999999999999999874 4
Q ss_pred ccEEEEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc--------eE
Q 036266 224 KPWYLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV--------AH 282 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~--------~k 282 (312)
...+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++. +|
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred CCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceee
Confidence 456788999999866543 469999999999999 889999999999999998876 99
Q ss_pred Eccccchhh
Q 036266 283 VSDFNISKL 291 (312)
Q Consensus 283 l~DFG~a~~ 291 (312)
|+|||+++.
T Consensus 162 l~Dfg~~~~ 170 (289)
T 4fvq_A 162 LSDPGISIT 170 (289)
T ss_dssp ECCCCSCTT
T ss_pred eccCccccc
Confidence 999999854
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.8e-28 Score=212.77 Aligned_cols=153 Identities=18% Similarity=0.245 Sum_probs=131.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..+.|+..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~ 87 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE--NR 87 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CS
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe--cC
Confidence 3457899999999999999999976 588999999976431 13567899999999999999999999987 44
Q ss_pred ccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC----ceEEcccc
Q 036266 224 KPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFN 287 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG 287 (312)
...+++|||++++++.+. ..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 568899999999876554 469999999999999 88999999999999999887 79999999
Q ss_pred chhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+++.. |++++|+++|..|+..
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 165 LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp TCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 88642 8899999999998854
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.5e-28 Score=214.61 Aligned_cols=154 Identities=27% Similarity=0.401 Sum_probs=130.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIA 219 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 219 (312)
...++|...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 34578999999999999999999863 35679999997643 34567789999999999 8999999999987
Q ss_pred ecccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 220 ILILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
. ....+++|||+++|++.+ ++.++.|+++||+||| +.+|+||||||+
T Consensus 112 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~ 186 (334)
T 2pvf_A 112 Q--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAAR 186 (334)
T ss_dssp S--SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred c--CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccc
Confidence 4 456788899999876544 3568999999999999 889999999999
Q ss_pred CeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 272 NNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
||+++.++.+||+|||+++.. |++++|++| |..|+++
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 999999999999999988532 888999998 8888864
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-28 Score=216.41 Aligned_cols=155 Identities=21% Similarity=0.301 Sum_probs=130.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---ccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~ 225 (312)
...+|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3467999999999999999999975 57789999997533 344567889999999999999999999986432 246
Q ss_pred EEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 226 WYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 226 ~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
.+++||++++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 105 VYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 78999998842 34455679999999999999 889999999999999999999999999987531
Q ss_pred -------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 234 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence 8888999999988864
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=212.21 Aligned_cols=155 Identities=21% Similarity=0.275 Sum_probs=124.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-----hHhHHHHHHHHHHhhcCC---CCceeeeeeeeeec
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVR---HRNLIKILTTIAIL 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~ 221 (312)
..++|+..+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4568999999999999999999964 68899999997432 112245667777776664 99999999998754
Q ss_pred c---cccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 222 I---LKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 222 ~---~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
. ....+++|||+++. ++.+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence 3 23578889998742 34556679999999999999 88999999999999999999999999
Q ss_pred ccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 286 FNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 286 FG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
||+|+.. |++++|+++|+.||..
T Consensus 164 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 221 (308)
T 3g33_A 164 FGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 221 (308)
T ss_dssp CSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred CccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 9998653 8889999999988853
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-28 Score=207.05 Aligned_cols=152 Identities=22% Similarity=0.355 Sum_probs=123.0
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|.+. ++.||||+++... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 81 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK--EPNL 81 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC--C--C
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec--CCce
Confidence 3467889999999999999999974 7889999987543 2234678899999999999999999999874 4457
Q ss_pred EEEecccCCCCHH-----------HHHHHHHHHHHHHHHHhCCCCCC---ceecCCCCCCeeeCC--------CCceEEc
Q 036266 227 YLSSCVMPNGDFP-----------ERLNIMIDMALAFEYLHHGRSTP---MVHCDLKPSNNLLDE--------DMVAHVS 284 (312)
Q Consensus 227 ~l~~~~~~~g~~~-----------~~~~i~~~i~~~l~ylH~~~~~~---iiHrDlkp~Nill~~--------~~~~kl~ 284 (312)
+++|||++++++. ....++.|+++|++||| +.+ |+||||||+||+++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 8889999988654 44579999999999999 666 999999999999986 6789999
Q ss_pred cccchhhh----------------------------------hhhhhhhhcCCCCCcc
Q 036266 285 DFNISKLL----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 285 DFG~a~~~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|||+++.. |++++|+++|+.|+..
T Consensus 159 Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 159 DFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred cCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99998753 8999999999999864
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-28 Score=232.42 Aligned_cols=141 Identities=15% Similarity=0.090 Sum_probs=110.1
Q ss_pred eccCCcEEEEEEEE-cCCcEEEEEEeehh----------hhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 161 LGTESLGSVYKWIF-LDETNVAIKVFNLQ----------LERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 161 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
.+.|+.|.+..++. -.|+.+|||.+..+ .+...++|.+|+++|+++ .|+||++++++++ +....|+
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e--d~~~~yL 319 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE--NAQSGWL 319 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE--CSSEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--ECCEEEE
Confidence 45566666655542 35788999999653 134567799999999999 6999999999988 5667899
Q ss_pred EecccCCCCHHHHH---------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 229 SSCVMPNGDFPERL---------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~---------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
+|||++|+++.+++ +|+.||+.||+|+| +++||||||||+|||+++++.+||+|||+|+..
T Consensus 320 VMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~ 396 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP 396 (569)
T ss_dssp EEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred EEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence 99999999998876 49999999999999 999999999999999999999999999999764
Q ss_pred -------hhhhhhhhcCCCCC
Q 036266 293 -------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 -------g~~~~e~~tg~~p~ 306 (312)
+|++||+++|++++
T Consensus 397 ~t~vGTp~YmAPE~l~g~~~~ 417 (569)
T 4azs_A 397 TNLVQSFFVFVNELFAENKSW 417 (569)
T ss_dssp HHHHHHHHHHHHHHC------
T ss_pred cCceechhhccHHHhCCCCCC
Confidence 89999999998664
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=213.75 Aligned_cols=143 Identities=22% Similarity=0.298 Sum_probs=121.7
Q ss_pred ceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEecccCC
Q 036266 158 WHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.+.||+|+||.||+|.+. +++.||||++... ....+.+|+.+++++. ||||+++++++. +....+++|||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~--~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH--DQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE--CSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE--cCCEEEEEEEccCC
Confidence 478999999999999975 5889999999754 2355678999999997 999999999987 45567899999999
Q ss_pred CCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC---ceEEccccchhhh--------
Q 036266 236 GDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM---VAHVSDFNISKLL-------- 292 (312)
Q Consensus 236 g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~---~~kl~DFG~a~~~-------- 292 (312)
|++.+ ...++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+|+..
T Consensus 91 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~ 167 (325)
T 3kn6_A 91 GELFERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167 (325)
T ss_dssp CBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc
Confidence 87654 4469999999999999 89999999999999997665 8999999998642
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=221.13 Aligned_cols=151 Identities=21% Similarity=0.271 Sum_probs=126.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----ccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~ 226 (312)
...+|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++... +...+
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3457999999999999999999987777799998865432 224699999999999999999998543 23447
Q ss_pred EEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccccchh
Q 036266 227 YLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DFG~a~ 290 (312)
+++|||++++ +......++.|+++||+||| +.+|+||||||+|||++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 8999999865 33445579999999999999 88999999999999999 79999999999986
Q ss_pred hh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.+ |++++|+++|+.||++
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 244 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 52 8899999999998864
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-28 Score=219.61 Aligned_cols=151 Identities=23% Similarity=0.270 Sum_probs=128.0
Q ss_pred ccccccceEeccCCcEEEEEEEE----cCCcEEEEEEeehhh----hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIF----LDETNVAIKVFNLQL----ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
.++|+..+.||+|+||.||+|+. .+++.||||+++... ......+.+|+++++++ +||||+++++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 130 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-- 130 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee--
Confidence 46799999999999999999997 367899999987532 22345567899999999 69999999998874
Q ss_pred cccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
....+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 131 ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 4467899999999877554 358999999999999 8899999999999999999999999999876
Q ss_pred hh---------------------------------------hhhhhhhhcCCCCCc
Q 036266 291 LL---------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 291 ~~---------------------------------------g~~~~e~~tg~~p~~ 307 (312)
.+ |++++|++||+.||.
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 263 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence 32 888889999988875
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-28 Score=211.23 Aligned_cols=150 Identities=25% Similarity=0.355 Sum_probs=124.7
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
.++|+..+.||+|+||.||+|++ .++.||||.+... ...+.+.+|++++++++||||+++++++.. ..+++||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN----PVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----TTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----CcEEEEE
Confidence 45788899999999999999987 4678999999753 344678999999999999999999998762 3678899
Q ss_pred ccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc-eEEccccchhhh---
Q 036266 232 VMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV-AHVSDFNISKLL--- 292 (312)
Q Consensus 232 ~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~-~kl~DFG~a~~~--- 292 (312)
|+++|++.+ .+.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++..
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999986644 4468899999999999432289999999999999998876 799999998643
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.|+.+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 8999999999999864
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=6.5e-28 Score=220.97 Aligned_cols=138 Identities=25% Similarity=0.357 Sum_probs=117.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--- 223 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 223 (312)
...++|...+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 34568999999999999999999975 57789999997532 3455778999999999999999999999865432
Q ss_pred ccEEEEecccCCC-----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 224 KPWYLSSCVMPNG-----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 224 ~~~~l~~~~~~~g-----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
..++++|||+++. +......++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+
T Consensus 103 ~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 103 DELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp CCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 5688999998742 44555679999999999999 8899999999999999999999999999985
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-28 Score=211.05 Aligned_cols=137 Identities=17% Similarity=0.179 Sum_probs=117.0
Q ss_pred hhccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~ 226 (312)
...++|+..+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++... .....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 3456899999999999999999997 46889999999766556667889999999999999999999998632 34567
Q ss_pred EEEecccCCCCHHH----------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 227 YLSSCVMPNGDFPE----------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 227 ~l~~~~~~~g~~~~----------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
+++|||+++|++.+ +..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 89999999986543 3469999999999999 889999999999999999999999999964
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-28 Score=217.09 Aligned_cols=138 Identities=26% Similarity=0.317 Sum_probs=109.5
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-----HhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-----RAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
....++|+..+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 83 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH-- 83 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC--
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee--
Confidence 345578999999999999999999975 588999999975321 123467899999999999999999999874
Q ss_pred cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
....+++|||++++ +..+...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 84 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 84 KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 45678888898753 23345679999999999999 8899999999999999999999999999987
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 161 ~ 161 (346)
T 1ua2_A 161 S 161 (346)
T ss_dssp T
T ss_pred e
Confidence 5
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.6e-28 Score=225.08 Aligned_cols=153 Identities=24% Similarity=0.333 Sum_probs=126.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..+.|+..+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++||||+++++++. ....++
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~ 112 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE--DKRNYY 112 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE--eCCEEE
Confidence 3457899999999999999999976 67889999997643 233567889999999999999999999987 455678
Q ss_pred EEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccchhhh
Q 036266 228 LSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNISKLL 292 (312)
Q Consensus 228 l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a~~~ 292 (312)
++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+|+.+
T Consensus 113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 9999999997644 3469999999999999 889999999999999975 455999999988642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||..
T Consensus 190 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 190 ENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp BTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 8899999999999864
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=215.63 Aligned_cols=151 Identities=25% Similarity=0.400 Sum_probs=126.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcE----EEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETN----VAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.++|+..+.||+|+||.||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. ...
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---~~~ 88 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP---GSS 88 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC---BSS
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc---CCc
Confidence 457888999999999999999964 3443 7888875432 233456778999999999999999999885 345
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence 788899999886544 4469999999999999 889999999999999999999999999999753
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.||..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 220 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence 889999999 9999865
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-28 Score=210.84 Aligned_cols=156 Identities=28% Similarity=0.440 Sum_probs=133.3
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
+.....++|+..+.||+|+||.||+|.+.. ++.||+|.+.... ...+.+.+|++++++++||||+++++++. ....
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~ 83 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--REPP 83 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEEC--SSSS
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEc--cCCC
Confidence 344567789999999999999999999764 7789999997643 34567889999999999999999999987 4456
Q ss_pred EEEEecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.+++|||++++++.+ +..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 788999999875543 4568999999999999 88999999999999999999999999999865
Q ss_pred h-------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 292 L-------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 292 ~-------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
. |++++|+++ |..|++.
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2 888899998 8888764
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=206.36 Aligned_cols=153 Identities=25% Similarity=0.341 Sum_probs=130.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~ 89 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH--DRKRI 89 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEE
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE--cCCEE
Confidence 3467999999999999999999976 56789999997643 223467889999999999999999999987 44567
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||+++|++.+ ...++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (284)
T 2vgo_A 90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS 166 (284)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence 89999999886544 4569999999999999 899999999999999999999999999987431
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 167 LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 8889999999998853
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.4e-28 Score=213.40 Aligned_cols=154 Identities=25% Similarity=0.360 Sum_probs=130.6
Q ss_pred hccccccceEeccCCcEEEEEEEE-----cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-----LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
...+|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.......
T Consensus 39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 446788999999999999999984 257789999998765566678999999999999999999999987655567
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||++++++.+ .++++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 889999999886644 4468999999999999 889999999999999999999999999987542
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||..|+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 249 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSK 249 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCC
Confidence 888888999887764
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-28 Score=209.21 Aligned_cols=136 Identities=22% Similarity=0.297 Sum_probs=116.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
...+.|+..+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 93 (302)
T 2j7t_A 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH--DGKLWI 93 (302)
T ss_dssp CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--C-CEEE
T ss_pred CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee--CCeEEE
Confidence 34567899999999999999999976 588899999987655566788999999999999999999999874 456788
Q ss_pred EecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|||++++++. +...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 89999988554 34569999999999999 8899999999999999999999999999864
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-28 Score=210.40 Aligned_cols=160 Identities=29% Similarity=0.392 Sum_probs=127.0
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
.++....++|...+.||+|+||.||+|.... ++.||+|.++... ....+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 3444566789999999999999999998642 3479999997542 344567899999999999999999999987
Q ss_pred ecccc---cEEEEecccCCCCHHH------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 220 ILILK---PWYLSSCVMPNGDFPE------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 220 ~~~~~---~~~l~~~~~~~g~~~~------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
..... ..+++|||+++|++.+ .+.++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCC
Confidence 54432 4588999999886544 4569999999999999 8999999999999999999
Q ss_pred CceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 279 MVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 279 ~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+.+||+|||+++.. |++++|+++ |..|++.
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 252 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCcc
Confidence 99999999998642 888899999 7777754
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-28 Score=217.21 Aligned_cols=155 Identities=21% Similarity=0.304 Sum_probs=121.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----cc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----IL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~ 223 (312)
..++|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4468999999999999999999965 67889999996532 34556788999999999999999999998643 22
Q ss_pred ccEEEEecccCC----------CCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 224 KPWYLSSCVMPN----------GDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~----------g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
...+++++++.+ -+......++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 107 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred CeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 456888888742 145667789999999999999 899999999999999999999999999998763
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||++
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999988864
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=208.51 Aligned_cols=151 Identities=28% Similarity=0.410 Sum_probs=126.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-------HhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-------RAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++++++||||+++++++....
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3467899999999999999999975 688899999865321 11267889999999999999999999986332
Q ss_pred cccEEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeCCCCc-----eE
Q 036266 223 LKPWYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLDEDMV-----AH 282 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~~~~~-----~k 282 (312)
+++|||+++|++. ....++.|++.|++||| +.+ |+||||||+||+++.++. +|
T Consensus 97 ----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 ----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp ----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred ----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEE
Confidence 5788899988654 34579999999999999 778 999999999999987776 99
Q ss_pred Eccccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 283 VSDFNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 283 l~DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+|||+|+.. |++++|+++|+.||.+
T Consensus 170 l~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 230 (287)
T 4f0f_A 170 VADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230 (287)
T ss_dssp ECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 9999988642 8999999999999864
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-28 Score=213.62 Aligned_cols=133 Identities=22% Similarity=0.274 Sum_probs=113.3
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCC--CceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRH--RNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~ 226 (312)
....|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.. ....
T Consensus 7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~--~~~~ 84 (343)
T 3dbq_A 7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT--DQYI 84 (343)
T ss_dssp SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEE
T ss_pred ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee--CCEE
Confidence 456799999999999999999998888999999997543 4455778999999999986 999999999874 4567
Q ss_pred EEEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++||+ .+++ +.++..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+|+
T Consensus 85 ~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~ 155 (343)
T 3dbq_A 85 YMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 155 (343)
T ss_dssp EEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred EEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccc
Confidence 888884 4444 4455679999999999999 88999999999999997 5789999999885
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9e-28 Score=215.80 Aligned_cols=155 Identities=24% Similarity=0.299 Sum_probs=129.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc---
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK--- 224 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 224 (312)
..++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.++++++||||+++++++......
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4567899999999999999999975 57889999997542 34457788999999999999999999998744322
Q ss_pred -cEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 225 -PWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 225 -~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
.++++|||+++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 120 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 196 (371)
T 4exu_A 120 YDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADA 196 (371)
T ss_dssp CCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-----
T ss_pred eeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCccccccc
Confidence 348888898742 45667789999999999999 889999999999999999999999999998653
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 197 EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp ---CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999988864
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=215.87 Aligned_cols=149 Identities=19% Similarity=0.187 Sum_probs=126.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|... +++.||||++.... ..+.+.+|+++++++ +||||+++++++.. ....+++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~--~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPC--GKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEE--TTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEec--CCccEEE
Confidence 467899999999999999999964 68889999997543 234578999999999 89999999999874 4567888
Q ss_pred ecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc-----eEEccccchhh
Q 036266 230 SCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV-----AHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~-----~kl~DFG~a~~ 291 (312)
|||+ ++++. +.+.++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+.
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 8999 66544 44579999999999999 889999999999999998887 99999999863
Q ss_pred h-------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L-------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~-------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++|+++|+.||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~ 219 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQG 219 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccc
Confidence 1 8999999999999865
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=205.88 Aligned_cols=153 Identities=22% Similarity=0.331 Sum_probs=131.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 82 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE--GNIQYL 82 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc--CCEEEE
Confidence 3467899999999999999999976 68899999997543 3345678899999999999999999999874 456788
Q ss_pred EecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||++++ +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.++.+
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 88899876 45667789999999999999 889999999999999999999999999987531
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 210 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSC
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999988754
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=223.41 Aligned_cols=153 Identities=25% Similarity=0.347 Sum_probs=128.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-------------HhHHHHHHHHHHhhcCCCCceeeeee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-------------RAFRSFDSKCEVHKNVRHRNLIKILT 216 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~~~ 216 (312)
..+.|...+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4567999999999999999999976 578899999975421 23467889999999999999999999
Q ss_pred eeeecccccEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC---ce
Q 036266 217 TIAILILKPWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM---VA 281 (312)
Q Consensus 217 ~~~~~~~~~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~---~~ 281 (312)
++. +...++++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++.++ .+
T Consensus 114 ~~~--~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFE--DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEE--CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEE--cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccE
Confidence 987 4556889999999996644 4469999999999999 88999999999999998765 69
Q ss_pred EEccccchhhh----------------------------------hhhhhhhhcCCCCCcc
Q 036266 282 HVSDFNISKLL----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 282 kl~DFG~a~~~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
||+|||+|+.+ |++++|+++|..||..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999998642 8999999999999864
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.6e-28 Score=208.24 Aligned_cols=153 Identities=21% Similarity=0.211 Sum_probs=120.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.++...++.++||||+++++++.. ....+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~--~~~~~ 82 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--EGDVW 82 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSSEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--cCCEE
Confidence 4578999999999999999999974 68889999997643 2233334455566888999999999999874 45678
Q ss_pred EEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|||++++ ++.....++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+|+.
T Consensus 83 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 83 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred EEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 888898752 34455679999999999999 76 999999999999999999999999998864
Q ss_pred h---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
. |++++|++||+.|++.
T Consensus 160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 2 8888899999998864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-28 Score=221.39 Aligned_cols=150 Identities=21% Similarity=0.239 Sum_probs=119.7
Q ss_pred ccccc-ceEeccCCcEEEEEEEEc---CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNE-WHLLGTESLGSVYKWIFL---DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
+.|.. .+.||+|+||.||+|++. +++.||||++.... ....+.+|++++++++||||+++++++.......+++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34554 457999999999999965 46789999997542 2346788999999999999999999997666778899
Q ss_pred EecccCCC--------------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee----CCCCceEEc
Q 036266 229 SSCVMPNG--------------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL----DEDMVAHVS 284 (312)
Q Consensus 229 ~~~~~~~g--------------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill----~~~~~~kl~ 284 (312)
+|||++++ ++.....++.|++.||+||| +.+|+||||||+|||+ +.++.+||+
T Consensus 98 v~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 98 LFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99998753 23345679999999999999 8899999999999999 678899999
Q ss_pred cccchhhh----------------------------------------hhhhhhhhcCCCCCc
Q 036266 285 DFNISKLL----------------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 285 DFG~a~~~----------------------------------------g~~~~e~~tg~~p~~ 307 (312)
|||+|+.+ |++++||+||+.||.
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 99998642 888888888888884
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=208.89 Aligned_cols=153 Identities=21% Similarity=0.264 Sum_probs=128.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--~~~~ 109 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--DGQL 109 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee--CCeE
Confidence 4568999999999999999999975 67889999997643 2345678899999999999999999999874 4567
Q ss_pred EEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 88899999876544 4579999999999999 889999999999999999999999999987542
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 8889999999998854
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-27 Score=210.47 Aligned_cols=133 Identities=23% Similarity=0.345 Sum_probs=112.9
Q ss_pred cccccc-eEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEW-HLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
+.|... +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.. ....+++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~--~~~~~lv 89 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE--EDRFYLV 89 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--CCEEEEE
Confidence 456663 68999999999999964 6889999999865544556788999999885 79999999999874 4568899
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc---eEEccccchh
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV---AHVSDFNISK 290 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~---~kl~DFG~a~ 290 (312)
|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 90 FEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 999999876544 469999999999999 889999999999999997765 9999999864
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=205.10 Aligned_cols=153 Identities=25% Similarity=0.367 Sum_probs=131.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 86 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST--PTDF 86 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--SSEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec--CCeE
Confidence 3467899999999999999999976 68899999997643 2234578899999999999999999999874 4567
Q ss_pred EEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 227 YLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++|||++++++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 889999998866543 469999999999999 889999999999999999999999999988642
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 164 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 8888888888888754
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-27 Score=208.91 Aligned_cols=153 Identities=24% Similarity=0.346 Sum_probs=129.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|...+.||+|+||.||+|+.. +++.||+|+++.........+.+|+.++++++||||+++++++. .....+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~~lv 84 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE--STTHYYLV 84 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE--CSSEEEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc--cCCEEEEE
Confidence 3467889999999999999999975 68899999998654444567889999999999999999999987 44567899
Q ss_pred ecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhhh--
Q 036266 230 SCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~~-- 292 (312)
|||++++++.+. ..++.|++.||+||| +.+|+||||||+||++ ++++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 85 MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp ECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred EEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999876543 469999999999999 8899999999999999 78899999999987642
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 162 GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 8899999999999754
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=210.96 Aligned_cols=135 Identities=27% Similarity=0.448 Sum_probs=113.0
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|...+.||+|+||.||+|.... +..||||.++... ......+.+|++++++++||||+++++++. ....
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--~~~~ 120 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS--KYKP 120 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe--cCCC
Confidence 4567778999999999999998653 2359999997643 344567889999999999999999999987 4456
Q ss_pred EEEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 226 WYLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 226 ~~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.+++|||+++|++. +++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred cEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 78899999987554 44569999999999999 88999999999999999999999999998864
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-28 Score=219.98 Aligned_cols=154 Identities=14% Similarity=0.182 Sum_probs=122.9
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehh---hhHhHHHHHHHH---HHhhcCCCCceeeee-------e
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQ---LERAFRSFDSKC---EVHKNVRHRNLIKIL-------T 216 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~-------~ 216 (312)
..++|...+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 356788899999999999999996 46889999999743 234557788999 556666899999998 4
Q ss_pred eeeeccc---------------ccEEEEecccCCCCHH-------------------HHHHHHHHHHHHHHHHhCCCCCC
Q 036266 217 TIAILIL---------------KPWYLSSCVMPNGDFP-------------------ERLNIMIDMALAFEYLHHGRSTP 262 (312)
Q Consensus 217 ~~~~~~~---------------~~~~l~~~~~~~g~~~-------------------~~~~i~~~i~~~l~ylH~~~~~~ 262 (312)
++..... ...+++|||+ +|++. .++.|+.|++.||+||| +.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCC
Confidence 4432211 1378899999 46543 34469999999999999 889
Q ss_pred ceecCCCCCCeeeCCCCceEEccccchhh-------------------------------------------hhhhhhhh
Q 036266 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKL-------------------------------------------LGVLLPET 299 (312)
Q Consensus 263 iiHrDlkp~Nill~~~~~~kl~DFG~a~~-------------------------------------------~g~~~~e~ 299 (312)
|+||||||+|||++.++.+||+|||+|+. +|++++|+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el 306 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI 306 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence 99999999999999999999999999852 18889999
Q ss_pred hcCCCCCcc
Q 036266 300 FTRKKPTIE 308 (312)
Q Consensus 300 ~tg~~p~~e 308 (312)
+||+.||.+
T Consensus 307 ltg~~Pf~~ 315 (377)
T 3byv_A 307 WCADLPITK 315 (377)
T ss_dssp HHSSCCC--
T ss_pred HHCCCCCcc
Confidence 999999864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=209.13 Aligned_cols=155 Identities=22% Similarity=0.302 Sum_probs=130.5
Q ss_pred hhccccccceEeccCCcEEEEEEEE------cCCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIF------LDETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
...++|...+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~- 98 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI- 98 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec-
Confidence 4456899999999999999999985 235679999998643 34457789999999999 89999999999874
Q ss_pred ccccEEEEecccCCCCHH------------------------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 222 ILKPWYLSSCVMPNGDFP------------------------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~------------------------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
....+++|||+++|++. +..+++.|+++||+||| +.+|+||||||+
T Consensus 99 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 174 (313)
T 1t46_A 99 -GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (313)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred -CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence 44578888899886553 34568999999999999 889999999999
Q ss_pred CeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 272 NNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
||+++.++.+||+|||+++.. |++++|++| |+.|+...
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 251 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcc
Confidence 999999999999999988642 888899998 88887653
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-28 Score=214.52 Aligned_cols=149 Identities=26% Similarity=0.363 Sum_probs=125.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|+..+.||+|+||.||+|... +++.||||+++.... ...+|++++.++ +||||+++++++. +....++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~--~~~~~~l 93 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYD--DGKYVYV 93 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEE--CSSEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEE--cCCEEEE
Confidence 4567999999999999999999976 578899999976532 235688888887 7999999999987 4567899
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-C---CceEEccccchhhh
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-D---MVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~---~~~kl~DFG~a~~~ 292 (312)
+|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||++.+ + +.+||+|||+|+..
T Consensus 94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999976554 469999999999999 889999999999999853 2 35999999998642
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..||..
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 8999999999999864
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-28 Score=229.69 Aligned_cols=144 Identities=23% Similarity=0.382 Sum_probs=124.7
Q ss_pred EeccCCcEEEEEEEEc---CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecccCC
Q 036266 160 LLGTESLGSVYKWIFL---DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 160 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++|||||++++++.. ..++++|||+++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---CCeEEEEEeCCC
Confidence 7999999999999864 34569999997643 3356779999999999999999999999863 347899999999
Q ss_pred CCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----------
Q 036266 236 GDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---------- 292 (312)
Q Consensus 236 g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---------- 292 (312)
|++.+ +..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 420 g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 420 GPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp CBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred CcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 86654 4569999999999999 889999999999999999999999999998752
Q ss_pred -----------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 -----------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 -----------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||++.
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 899999998 99998753
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-27 Score=212.40 Aligned_cols=141 Identities=22% Similarity=0.353 Sum_probs=119.8
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcC-CCCceeeee
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNV-RHRNLIKIL 215 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~~~ 215 (312)
.......++|+..+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445678999999999999999999985 68999999987532 22345678899999999 799999999
Q ss_pred eeeeecccccEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 216 TTIAILILKPWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 216 ~~~~~~~~~~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
+++. .....+++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 167 ~~~~--~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 167 DSYE--SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEE--BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEe--eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 9987 4556889999999986654 3469999999999999 889999999999999999999999
Q ss_pred ccccchhh
Q 036266 284 SDFNISKL 291 (312)
Q Consensus 284 ~DFG~a~~ 291 (312)
+|||++..
T Consensus 242 ~DfG~~~~ 249 (365)
T 2y7j_A 242 SDFGFSCH 249 (365)
T ss_dssp CCCTTCEE
T ss_pred EecCcccc
Confidence 99998753
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=228.70 Aligned_cols=145 Identities=25% Similarity=0.416 Sum_probs=124.4
Q ss_pred eEeccCCcEEEEEEEEc---CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFL---DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|.+. .++.||||+++... ....+++.+|++++++++|||||++++++.. ...+++|||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCEEEEEEcc
Confidence 47999999999999753 35679999998643 3345789999999999999999999999863 3478999999
Q ss_pred CCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++.+ ++.++.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+.+
T Consensus 452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9986544 4579999999999999 889999999999999999999999999998753
Q ss_pred ------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||+..
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 889999998 99998653
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=207.25 Aligned_cols=149 Identities=21% Similarity=0.312 Sum_probs=125.8
Q ss_pred ccccccc-eEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHh-hcCCCCceeeeeeeeee--cccccE
Q 036266 152 TDEFNEW-HLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVH-KNVRHRNLIKILTTIAI--LILKPW 226 (312)
Q Consensus 152 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~--~~~~~~ 226 (312)
.++|... +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ......
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 3456665 78999999999999974 6889999999743 3456788877 66689999999998864 235668
Q ss_pred EEEecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccch
Q 036266 227 YLSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNIS 289 (312)
Q Consensus 227 ~l~~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a 289 (312)
+++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999986654 3469999999999999 899999999999999997 789999999999
Q ss_pred hhh--------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL--------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~--------------g~~~~e~~tg~~p~~e 308 (312)
+.. |++++|++||+.||..
T Consensus 168 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 168 KETTGEKYDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp EECTTCGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 764 9999999999999854
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=207.61 Aligned_cols=152 Identities=23% Similarity=0.392 Sum_probs=125.7
Q ss_pred hhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
....++|+..+.||+|+||.||+|++. ..||||+++... ....+.+.+|++++++++||||++++++.. ....
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---~~~~ 94 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---APQL 94 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC---SSSC
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc---CCcc
Confidence 445678999999999999999999853 359999997543 445577899999999999999999999754 3346
Q ss_pred EEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||++++++ .+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccc
Confidence 888899987754 445579999999999999 889999999999999999999999999987531
Q ss_pred ----------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 8889999999999864
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-27 Score=216.59 Aligned_cols=148 Identities=21% Similarity=0.315 Sum_probs=123.1
Q ss_pred cccccc-eEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHh-hcCCCCceeeeeeeeee--cccccEE
Q 036266 153 DEFNEW-HLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVH-KNVRHRNLIKILTTIAI--LILKPWY 227 (312)
Q Consensus 153 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~--~~~~~~~ 227 (312)
++|... +.||+|+||.||+|.+. +++.||||+++.. ..+.+|+.++ +..+||||+++++++.. .+...++
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456555 68999999999999975 5888999999743 3456788876 44589999999998863 2355689
Q ss_pred EEecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccchh
Q 036266 228 LSSCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a~ 290 (312)
++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+|+
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999886544 4469999999999999 889999999999999997 7899999999986
Q ss_pred hh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++||++|+.||..
T Consensus 213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 265 (400)
T 1nxk_A 213 ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_dssp ECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 52 8999999999999853
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=214.89 Aligned_cols=153 Identities=12% Similarity=0.065 Sum_probs=115.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHH---HHhhcCCCCceeeee-------ee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKC---EVHKNVRHRNLIKIL-------TT 217 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~~~-------~~ 217 (312)
...|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+ +.++. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 455889999999999999999975 68889999998743 33455677775 45555 799988855 33
Q ss_pred eeeccc---------------ccEEEEecccCCCCHHHH-------------------HHHHHHHHHHHHHHhCCCCCCc
Q 036266 218 IAILIL---------------KPWYLSSCVMPNGDFPER-------------------LNIMIDMALAFEYLHHGRSTPM 263 (312)
Q Consensus 218 ~~~~~~---------------~~~~l~~~~~~~g~~~~~-------------------~~i~~~i~~~l~ylH~~~~~~i 263 (312)
+..... ..++++|||++ |++.+. ..++.|+++||+||| +.+|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~i 215 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGL 215 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCC
Confidence 322211 44799999999 776543 345699999999999 8899
Q ss_pred eecCCCCCCeeeCCCCceEEccccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 264 iHrDlkp~Nill~~~~~~kl~DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+||||||+|||++.++.+||+|||+|+.. |++++|++||+.||.+
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998653 8999999999999876
Q ss_pred c
Q 036266 309 M 309 (312)
Q Consensus 309 ~ 309 (312)
.
T Consensus 296 ~ 296 (371)
T 3q60_A 296 V 296 (371)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=214.89 Aligned_cols=132 Identities=22% Similarity=0.288 Sum_probs=111.9
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC--CCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR--HRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~ 227 (312)
...|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++... ..++
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~--~~~~ 132 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD--QYIY 132 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC--CEEE
Confidence 35699999999999999999998778899999997543 445677899999999997 59999999998743 4578
Q ss_pred EEecccCCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 228 LSSCVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++||+ .++++ .++..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+|+
T Consensus 133 lv~E~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 133 MVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp EEEEC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred EEEec-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 88884 45544 455679999999999999 89999999999999996 5899999999885
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-27 Score=210.07 Aligned_cols=153 Identities=23% Similarity=0.394 Sum_probs=125.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec---------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--------- 221 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--------- 221 (312)
.++|...+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467899999999999999999976 4788999999876666677889999999999999999999987432
Q ss_pred ---ccccEEEEecccCCCCH-----------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEEccc
Q 036266 222 ---ILKPWYLSSCVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDF 286 (312)
Q Consensus 222 ---~~~~~~l~~~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl~DF 286 (312)
.....+++|||++ |++ .....++.|++.||+||| +.+|+||||||+||+++ +++.+||+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3356789999997 444 445679999999999999 88999999999999997 5679999999
Q ss_pred cchhhh----------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL----------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~----------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|++||+.|+..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 227 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCC
Confidence 988631 8899999999998864
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-27 Score=207.15 Aligned_cols=153 Identities=23% Similarity=0.328 Sum_probs=131.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..+.|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l 97 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DTKLWI 97 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CCeEEE
Confidence 3456888999999999999999865 68899999997653 3345778999999999999999999999874 456788
Q ss_pred EecccCCCCH-----------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 229 SSCVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 229 ~~~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
+|||++++++ .+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 98 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 174 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174 (303)
T ss_dssp EEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred EEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence 9999998754 445679999999999999 889999999999999999999999999988542
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 8889999999998864
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.5e-28 Score=215.71 Aligned_cols=135 Identities=23% Similarity=0.311 Sum_probs=109.2
Q ss_pred cccccceEeccCCcEEEEEEEEc--CC--cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL--DE--TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..|...+.||+|+||.||+|.+. ++ ..||||.++... ....+.+.+|+.++++++||||+++++++... ....+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~~~~ 167 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPL 167 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-SSCCE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CCCeE
Confidence 35677889999999999999864 22 358999987533 34567789999999999999999999986532 33567
Q ss_pred EEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 228 LSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 228 l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
++|||+++|++.+. +.++.|+++||+||| +.+|+||||||+||++++++.+||+|||+|+.
T Consensus 168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccc
Confidence 88999999876544 468999999999999 88999999999999999999999999999863
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.3e-27 Score=207.55 Aligned_cols=137 Identities=20% Similarity=0.270 Sum_probs=112.8
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhc--CCCCceeeeeeeeeeccc-
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKN--VRHRNLIKILTTIAILIL- 223 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~- 223 (312)
......++|+..+.||+|+||.||+|++. ++.||||++..... ..+.+|.+++.. ++||||+++++++.....
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445678999999999999999999874 78899999975432 234445555544 489999999999875433
Q ss_pred -ccEEEEecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCC--------CceecCCCCCCeeeCCCCceEE
Q 036266 224 -KPWYLSSCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRST--------PMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 224 -~~~~l~~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~--------~iiHrDlkp~Nill~~~~~~kl 283 (312)
...+++|||+++|++.+. ..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl 183 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred CCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence 568999999999976554 469999999999999 66 9999999999999999999999
Q ss_pred ccccchh
Q 036266 284 SDFNISK 290 (312)
Q Consensus 284 ~DFG~a~ 290 (312)
+|||+|+
T Consensus 184 ~Dfg~a~ 190 (337)
T 3mdy_A 184 ADLGLAV 190 (337)
T ss_dssp CCCTTCE
T ss_pred EeCCCce
Confidence 9999984
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=210.82 Aligned_cols=151 Identities=28% Similarity=0.413 Sum_probs=124.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcE----EEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETN----VAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..+|+..+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---T 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS---S
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC---C
Confidence 467899999999999999999964 3443 5777775432 34557789999999999999999999998743 3
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++++++++|++.+ .+.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 677888999886544 4569999999999999 889999999999999999999999999998653
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|+++ |+.||..
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 222 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 888999999 8888864
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-27 Score=211.97 Aligned_cols=154 Identities=24% Similarity=0.304 Sum_probs=130.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc----c
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL----K 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----~ 224 (312)
..+|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.++++++||||+++++++..... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467899999999999999999975 58889999997532 3445678899999999999999999999865432 2
Q ss_pred cEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 225 PWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 225 ~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
..+++|||+++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 179 (353)
T 3coi_A 103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179 (353)
T ss_dssp CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence 458888888742 56777889999999999999 889999999999999999999999999998653
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8888999999988864
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=204.48 Aligned_cols=152 Identities=20% Similarity=0.281 Sum_probs=129.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.++|+..+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|+.++++++||||+++++++.. ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~ 81 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN--KT 81 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--SS
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC--CC
Confidence 356889999999999999999976 688999999975431 135678999999999999999999999874 45
Q ss_pred cEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC----ceEEccccc
Q 036266 225 PWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFNI 288 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG~ 288 (312)
..+++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 82 DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred eEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 6788999999886654 4469999999999999 88999999999999998777 899999998
Q ss_pred hhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
++.. |++++|+++|+.|+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 8642 8888899999888754
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-28 Score=212.20 Aligned_cols=157 Identities=21% Similarity=0.305 Sum_probs=131.4
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEcC-C-----cEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeee
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFLD-E-----TNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIA 219 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 219 (312)
.....++|...+.||+|+||.||+|.... + +.||+|.+.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999999642 2 479999997643 34456789999999999 8999999999987
Q ss_pred ecccccEEEEecccCCCCHHH--------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 220 ILILKPWYLSSCVMPNGDFPE--------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 220 ~~~~~~~~l~~~~~~~g~~~~--------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
. ....+++|||+++|++.+ .+.++.|++.||+||| +.+|+||||||+||
T Consensus 121 ~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NI 195 (333)
T 2i1m_A 121 H--GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNV 195 (333)
T ss_dssp S--SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGC
T ss_pred c--CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceE
Confidence 4 446788899999876644 3458899999999999 88999999999999
Q ss_pred eeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 274 LLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
+++.++.+||+|||+|+.. |++++|++| |..|+++.
T Consensus 196 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 196 LLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp EEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred EECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999999998642 888888998 88888653
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.4e-27 Score=205.88 Aligned_cols=151 Identities=27% Similarity=0.360 Sum_probs=126.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
++|.....||+|+||.||+|.+. +++.||||.+........+.+.+|+.++++++||||+++++++.. ....+++||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 99 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE--NGFIKIFME 99 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--CCcEEEEEE
Confidence 34555669999999999999975 578899999987655556778999999999999999999999874 446788889
Q ss_pred ccCCCCHHH---------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccchhhh---
Q 036266 232 VMPNGDFPE---------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNISKLL--- 292 (312)
Q Consensus 232 ~~~~g~~~~---------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~a~~~--- 292 (312)
|++++++.+ ...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 998875543 3458899999999999 889999999999999987 899999999987531
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 8899999999999864
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-27 Score=205.12 Aligned_cols=151 Identities=23% Similarity=0.356 Sum_probs=127.5
Q ss_pred ccccccce-EeccCCcEEEEEEEEc---CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWH-LLGTESLGSVYKWIFL---DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|...+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++. ....
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---~~~~ 84 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ---AEAL 84 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE---SSSE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec---CCCc
Confidence 34566665 9999999999999864 46779999998643 445677899999999999999999999984 2347
Q ss_pred EEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||++++++. +...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 8899999987554 44579999999999999 889999999999999999999999999987532
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 889999998 9999864
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=217.31 Aligned_cols=152 Identities=22% Similarity=0.306 Sum_probs=126.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC------CCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV------RHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~~ 223 (312)
...+|+..+.||+|+||.||+|... +++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++.. .
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~--~ 171 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF--R 171 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE--T
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc--C
Confidence 3457999999999999999999875 5788999999764 33345677788887776 57799999999874 4
Q ss_pred ccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc--eEEccccc
Q 036266 224 KPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV--AHVSDFNI 288 (312)
Q Consensus 224 ~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~--~kl~DFG~ 288 (312)
..++++|||+++. ++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 172 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 172 NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp TEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence 5678889998643 44556689999999999999 889999999999999998887 99999999
Q ss_pred hhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.. |++++|++||+.||+.
T Consensus 249 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 249 SCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 8542 8999999999998864
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.8e-27 Score=205.68 Aligned_cols=153 Identities=22% Similarity=0.327 Sum_probs=125.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...+|+..+.||+|+||.||+|... +++.||||++.... ......+.+|+.++++++||||+++++++.. ....
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~ 107 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE--DNEL 107 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--CCcE
Confidence 3457999999999999999999974 68899999997532 3455678899999999999999999999874 4467
Q ss_pred EEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 227 YLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+++|||++++++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence 888999999866543 468999999999999 8899999999999999999999999999876
Q ss_pred hh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.|+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred eecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 42 8899999999998753
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3e-27 Score=208.94 Aligned_cols=139 Identities=18% Similarity=0.198 Sum_probs=117.5
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeee------
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAI------ 220 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~------ 220 (312)
.....+|+..+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++..
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 344568999999999999999999975 68899999997665566677899999999996 9999999998842
Q ss_pred cccccEEEEecccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeCCCCceEEc
Q 036266 221 LILKPWYLSSCVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLDEDMVAHVS 284 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~~~~~~kl~ 284 (312)
.....++++|||+++. ++.+...++.|++.||+||| +.+ |+||||||+||+++.++.+||+
T Consensus 104 ~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 104 TGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp TSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred cCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEe
Confidence 2344578889998632 34455679999999999999 777 9999999999999999999999
Q ss_pred cccchh
Q 036266 285 DFNISK 290 (312)
Q Consensus 285 DFG~a~ 290 (312)
|||+++
T Consensus 181 Dfg~~~ 186 (337)
T 3ll6_A 181 DFGSAT 186 (337)
T ss_dssp CCTTCB
T ss_pred cCccce
Confidence 999874
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=210.51 Aligned_cols=137 Identities=23% Similarity=0.253 Sum_probs=116.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec---cccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL---ILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~---~~~~ 225 (312)
..++|...+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++... ....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4567999999999999999999975 58889999997432 34456788999999999999999999987543 2356
Q ss_pred EEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 226 WYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 226 ~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
.+++|||+++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 89 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 89 VYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 88999998742 34455679999999999999 8899999999999999999999999999875
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=2.3e-27 Score=208.06 Aligned_cols=159 Identities=23% Similarity=0.290 Sum_probs=132.1
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeee
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTT 217 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 217 (312)
.......++|...+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|+++++++ +||||++++++
T Consensus 20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 99 (316)
T 2xir_A 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 99 (316)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEE
Confidence 344456678999999999999999999842 35679999997643 34456788999999999 69999999999
Q ss_pred eeecccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCC
Q 036266 218 IAILILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLK 269 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlk 269 (312)
+... ...++++|||+++|++.+ +..++.|+++||+||| +.+|+|||||
T Consensus 100 ~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dik 175 (316)
T 2xir_A 100 CTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 175 (316)
T ss_dssp ECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCc
Confidence 8643 334788899999875543 4568999999999999 8899999999
Q ss_pred CCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 270 PSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 270 p~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|+||+++.++.+||+|||+++.. |++++|++| |..|+.+
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 99999999999999999998642 888889998 8888864
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-27 Score=204.70 Aligned_cols=136 Identities=24% Similarity=0.339 Sum_probs=113.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
....|+..+.||+|+||.||+|.+.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 101 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGS 101 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-CCc
Confidence 34568888999999999999998643 2258999987533 34557789999999999999999999986533 345
Q ss_pred EEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 226 WYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
.+++|||+++|++.+ ...++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|+
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence 678899999986654 4468999999999999 8899999999999999999999999999986
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=209.17 Aligned_cols=152 Identities=28% Similarity=0.374 Sum_probs=124.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
..++|...+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467899999999999999999975 57889999997532 12234578999999999999999999998643
Q ss_pred ccccEEEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc---eEEccc
Q 036266 222 ILKPWYLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV---AHVSDF 286 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~---~kl~DF 286 (312)
..+++|||++++++. +...++.|++.||+||| +.+|+||||||+||+++.++. +||+||
T Consensus 88 ---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 ---DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp ---SEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred ---ceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 378899999987554 44579999999999999 889999999999999986654 999999
Q ss_pred cchhhh--------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL--------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~--------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|+++|..|+.+
T Consensus 162 g~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (322)
T 2ycf_A 162 GHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221 (322)
T ss_dssp TTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred ccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 987542 8888899999988754
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.4e-28 Score=209.50 Aligned_cols=155 Identities=23% Similarity=0.353 Sum_probs=116.2
Q ss_pred hhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
....++|...+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~ 88 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVV--KDEL 88 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEES--SSCE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEee--cCCc
Confidence 345678999999999999999999864 67889999987543 3345678899999999999999999999874 3457
Q ss_pred EEEecccCCCCHHH--------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 227 YLSSCVMPNGDFPE--------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 227 ~l~~~~~~~g~~~~--------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
+++|||++++++.+ +..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEec
Confidence 88899999886543 4468999999999999 889999999999999999999999999
Q ss_pred cchhhh------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|+++|+.|+..
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 987531 8899999999999864
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=203.71 Aligned_cols=151 Identities=24% Similarity=0.395 Sum_probs=128.1
Q ss_pred hccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|...+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 86 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---EP 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS---SS
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CC
Confidence 45678999999999999999998643 2359999998653 3456778999999999999999999998763 23
Q ss_pred EEEEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||++++++.+. ..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 5788999998866543 468999999999999 899999999999999999999999999988642
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTI 307 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~ 307 (312)
|++++|++| |+.|+.
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~ 216 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF 216 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence 888999998 888875
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=214.72 Aligned_cols=152 Identities=19% Similarity=0.224 Sum_probs=128.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC--------CCceeeeeeeeeec-
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR--------HRNLIKILTTIAIL- 221 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~~~- 221 (312)
.++|...+.||+|+||.||+|+.. +++.||||+++.. ....+.+.+|++++++++ |+||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 467999999999999999999975 5788999999754 344567889999998885 78899999988632
Q ss_pred -ccccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCC-------
Q 036266 222 -ILKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDM------- 279 (312)
Q Consensus 222 -~~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~------- 279 (312)
....++++|||+.++ ++.+...++.|++.||+||| +. +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 456789999999543 44556689999999999999 77 999999999999999775
Q ss_pred ------------------------------------------ceEEccccchhhh-------------------------
Q 036266 280 ------------------------------------------VAHVSDFNISKLL------------------------- 292 (312)
Q Consensus 280 ------------------------------------------~~kl~DFG~a~~~------------------------- 292 (312)
.+||+|||+|+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 271 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYN 271 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCC
Confidence 7999999998642
Q ss_pred --------hhhhhhhhcCCCCCc
Q 036266 293 --------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------g~~~~e~~tg~~p~~ 307 (312)
|++++||+||+.||.
T Consensus 272 ~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 272 TPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCC
T ss_pred cHHHHHHHHHHHHHHhhCCCCCC
Confidence 899999999999985
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=209.83 Aligned_cols=142 Identities=21% Similarity=0.265 Sum_probs=120.0
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc-
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI- 222 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~- 222 (312)
..+....++|+..+.||+|+||.||+|++. +++.||||++.... .....+.+|+.+++++ +||||+++++++....
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 344456778999999999999999999974 68899999997543 2346688999999998 7999999999987533
Q ss_pred ---cccEEEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 223 ---LKPWYLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 223 ---~~~~~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
....+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEee
Confidence 4568899999998865443 468999999999999 88999999999999999999999999
Q ss_pred ccchhh
Q 036266 286 FNISKL 291 (312)
Q Consensus 286 FG~a~~ 291 (312)
||+++.
T Consensus 173 fg~~~~ 178 (326)
T 2x7f_A 173 FGVSAQ 178 (326)
T ss_dssp CTTTC-
T ss_pred CcCcee
Confidence 998754
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-27 Score=204.73 Aligned_cols=133 Identities=22% Similarity=0.327 Sum_probs=111.6
Q ss_pred ccccceEeccCCcEEEEEEEEcC-C---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLD-E---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
.|...+.||+|+||.||+|.+.+ + ..||+|.+.... ....+.+.+|++++++++||||+++++++.... ...++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE-GLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-SCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC-CCcEE
Confidence 45667899999999999998642 2 269999987533 345577899999999999999999999987433 23478
Q ss_pred EecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 229 SSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
+|+|+.+|++.+ +..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|+
T Consensus 101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 172 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLAR 172 (298)
T ss_dssp EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSC
T ss_pred EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcc
Confidence 888998886544 4579999999999999 8899999999999999999999999999986
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.8e-27 Score=211.42 Aligned_cols=161 Identities=19% Similarity=0.140 Sum_probs=120.6
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc--
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI-- 222 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 222 (312)
.......++|+..+.||+|+||.||+|++. +++.||||++.... .......+|++.++.++||||+++++++....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 344566788999999999999999999975 58899999986543 23345677888889999999999999986422
Q ss_pred ---cccEEEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEE
Q 036266 223 ---LKPWYLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHV 283 (312)
Q Consensus 223 ---~~~~~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl 283 (312)
....+++|||++++ +......++.|++.|+.|||.. +.+|+||||||+||+++. ++.+||
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEE
Confidence 23478899999875 2233457999999999999943 678999999999999996 899999
Q ss_pred ccccchhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 284 SDFNISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 284 ~DFG~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|||+|+.. |++++|++||+.||..
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 234 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence 999998653 8888888888888754
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-27 Score=208.33 Aligned_cols=152 Identities=28% Similarity=0.394 Sum_probs=127.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcE--EEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETN--VAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.||+|+||.||+|+.. ++.. +|+|.++... ....+.+.+|+++++++ +||||+++++++.. ....
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--~~~~ 101 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYL 101 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE--TTEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee--CCce
Confidence 467889999999999999999965 4554 5999987532 34456788999999999 89999999999874 4567
Q ss_pred EEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 227 YLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 227 ~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
+++|||+++|++.+ +..++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCC
Confidence 89999999886644 3468999999999999 8999999999999999999
Q ss_pred CceEEccccchhhh-----------------------------------hhhhhhhhc-CCCCCcc
Q 036266 279 MVAHVSDFNISKLL-----------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 279 ~~~kl~DFG~a~~~-----------------------------------g~~~~e~~t-g~~p~~e 308 (312)
+.+||+|||+++.. |++++|++| |+.|+..
T Consensus 179 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 99999999988631 899999998 9999854
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=208.83 Aligned_cols=157 Identities=18% Similarity=0.198 Sum_probs=131.0
Q ss_pred HHhhhccccccc-eEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeec
Q 036266 147 DILQATDEFNEW-HLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAIL 221 (312)
Q Consensus 147 ~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 221 (312)
......+.|... +.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++ ||||+++++++.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~-- 99 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE-- 99 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE--
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE--
Confidence 334455566666 88999999999999976 58899999997643 233567889999999985 699999999987
Q ss_pred ccccEEEEecccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEc
Q 036266 222 ILKPWYLSSCVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVS 284 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~ 284 (312)
.....+++|||+++| ++.+...++.|++.||+||| +.+|+||||||+||+++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEe
Confidence 445678889999876 45567789999999999999 889999999999999987 7899999
Q ss_pred cccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 285 DFNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 285 DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|||+++.. |++++|+++|+.|+..
T Consensus 177 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp CGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99998642 8899999999998854
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=204.74 Aligned_cols=154 Identities=23% Similarity=0.362 Sum_probs=127.8
Q ss_pred hhhccccccce-EeccCCcEEEEEEEEc---CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 149 LQATDEFNEWH-LLGTESLGSVYKWIFL---DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 149 ~~~~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
.....+|...+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 88 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE--- 88 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE---
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC---
Confidence 33456778777 9999999999999653 35679999997643 233567899999999999999999999983
Q ss_pred cccEEEEecccCCCCHHH------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNGDFPE------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
....+++|||++++++.+ ...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 345788999999886544 4579999999999999 8899999999999999999999999999875
Q ss_pred hh---------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 291 LL---------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 291 ~~---------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
.. |++++|++| |+.|+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 32 889999999 9999864
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-27 Score=207.22 Aligned_cols=135 Identities=24% Similarity=0.341 Sum_probs=109.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeee---cccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI---LILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~---~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|+. +++.||||++....... .....|+..+..++||||+++++.+.. .....++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 456899999999999999999976 67889999997543221 112334444566899999999976532 2344678
Q ss_pred EEecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCC---------CceecCCCCCCeeeCCCCceEEcccc
Q 036266 228 LSSCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRST---------PMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 228 l~~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~---------~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
++|||+++|++.+. .+++.|+++||+||| +. +|+||||||+|||++.++.+||+|||
T Consensus 89 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 99999999977554 469999999999999 67 99999999999999999999999999
Q ss_pred chh
Q 036266 288 ISK 290 (312)
Q Consensus 288 ~a~ 290 (312)
+|+
T Consensus 166 ~a~ 168 (336)
T 3g2f_A 166 LSM 168 (336)
T ss_dssp TCE
T ss_pred cee
Confidence 984
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-27 Score=202.75 Aligned_cols=152 Identities=29% Similarity=0.433 Sum_probs=126.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...++|+..+.||+|+||.||+|.. +++.||||+++... ..+.+.+|++++++++||||+++++++... ....+++
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv 93 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIV 93 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CCceEEE
Confidence 3457899999999999999999987 47889999997543 446788999999999999999999986532 3357899
Q ss_pred ecccCCCCHHH--------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDFPE--------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~~~--------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||++++++.+ ...++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp ECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred EecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999986543 3468999999999999 889999999999999999999999999988653
Q ss_pred ------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 ------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++|++| |+.|++.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 217 (278)
T 1byg_A 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217 (278)
T ss_dssp -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 889999998 8888764
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=8.8e-27 Score=202.74 Aligned_cols=137 Identities=24% Similarity=0.330 Sum_probs=117.2
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---------hHhHHHHHHHHHHhhcCC-CCceeeeeeee
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---------ERAFRSFDSKCEVHKNVR-HRNLIKILTTI 218 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~ 218 (312)
...++|+..+.||+|+||.||+|... +++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999975 57889999997532 233566889999999996 99999999998
Q ss_pred eecccccEEEEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 219 AILILKPWYLSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 219 ~~~~~~~~~l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
. .....+++|||++++++.+. ..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 94 ~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 94 E--TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp E--CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred c--cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecc
Confidence 7 45568889999999866543 469999999999999 889999999999999999999999999
Q ss_pred cchhh
Q 036266 287 NISKL 291 (312)
Q Consensus 287 G~a~~ 291 (312)
|+++.
T Consensus 169 g~~~~ 173 (298)
T 1phk_A 169 GFSCQ 173 (298)
T ss_dssp TTCEE
T ss_pred cchhh
Confidence 98753
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.9e-27 Score=201.65 Aligned_cols=137 Identities=21% Similarity=0.352 Sum_probs=115.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
..++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|+..+.++ +||||+++++++.. ....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--DDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE--TTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec--CCeE
Confidence 3467899999999999999999976 68899999997532 33456788899999998 89999999999874 4567
Q ss_pred EEEecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-------------
Q 036266 227 YLSSCVMPNGDFPER----------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE------------- 277 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~------------- 277 (312)
+++|||++++++.+. ..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence 888999999866543 469999999999999 889999999999999984
Q ss_pred ------CCceEEccccchhhh
Q 036266 278 ------DMVAHVSDFNISKLL 292 (312)
Q Consensus 278 ------~~~~kl~DFG~a~~~ 292 (312)
...+||+|||.++..
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~ 184 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRI 184 (289)
T ss_dssp ------CCCEEECCCTTCEET
T ss_pred ccccCCceEEEEccccccccc
Confidence 447999999987653
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-27 Score=209.07 Aligned_cols=151 Identities=20% Similarity=0.294 Sum_probs=129.7
Q ss_pred ccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHh-----------------HHHHHHHHHHhhcCCCCceeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERA-----------------FRSFDSKCEVHKNVRHRNLIKI 214 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~niv~~ 214 (312)
.++|...+.||+|+||.||+|.. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 88999999998653221 1778999999999999999999
Q ss_pred eeeeeecccccEEEEecccCCC--------------------CHHHHHHHHHHHHHHHHHHhCCCC-CCceecCCCCCCe
Q 036266 215 LTTIAILILKPWYLSSCVMPNG--------------------DFPERLNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNN 273 (312)
Q Consensus 215 ~~~~~~~~~~~~~l~~~~~~~g--------------------~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Ni 273 (312)
++++.. ....+++|||+++| ++..+..++.|++.||+||| + .+|+||||||+||
T Consensus 109 ~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITN--YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI 183 (348)
T ss_dssp SEEEES--SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred EEEEee--CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence 999874 45678888898875 34556789999999999999 7 8999999999999
Q ss_pred eeCCCCceEEccccchhhh------------------------------------hhhhhhhhcCCCCCcc
Q 036266 274 LLDEDMVAHVSDFNISKLL------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~~~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+++.++.+||+|||+++.. |++++|+++|+.|+..
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 254 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999988652 7788888888888753
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.3e-27 Score=204.87 Aligned_cols=134 Identities=20% Similarity=0.320 Sum_probs=115.3
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeee---------
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAI--------- 220 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~--------- 220 (312)
...+|+..+.||+|+||.||+|.+. +++.||+|.++... ..+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 3457889999999999999999976 68899999997643 346789999999999999999998753
Q ss_pred -----cccccEEEEecccCCCCHHHH--------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCce
Q 036266 221 -----LILKPWYLSSCVMPNGDFPER--------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVA 281 (312)
Q Consensus 221 -----~~~~~~~l~~~~~~~g~~~~~--------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~ 281 (312)
.....++++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 124457899999999866543 469999999999999 8899999999999999999999
Q ss_pred EEccccchhh
Q 036266 282 HVSDFNISKL 291 (312)
Q Consensus 282 kl~DFG~a~~ 291 (312)
||+|||+++.
T Consensus 162 kl~Dfg~~~~ 171 (284)
T 2a19_B 162 KIGDFGLVTS 171 (284)
T ss_dssp EECCCTTCEE
T ss_pred EECcchhhee
Confidence 9999998765
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=99.94 E-value=9.5e-27 Score=202.60 Aligned_cols=137 Identities=23% Similarity=0.338 Sum_probs=118.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--------
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL-------- 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-------- 221 (312)
..++|+..+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3467899999999999999999975 6889999999754 34456788999999999999999999987542
Q ss_pred ---ccccEEEEecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcc
Q 036266 222 ---ILKPWYLSSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSD 285 (312)
Q Consensus 222 ---~~~~~~l~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~D 285 (312)
.....+++|||+++|++.+. ..++.|+++||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 24568899999999876554 358999999999999 88999999999999999999999999
Q ss_pred ccchhh
Q 036266 286 FNISKL 291 (312)
Q Consensus 286 FG~a~~ 291 (312)
||+++.
T Consensus 160 fg~~~~ 165 (303)
T 1zy4_A 160 FGLAKN 165 (303)
T ss_dssp CCCCSC
T ss_pred Ccchhh
Confidence 998864
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=205.26 Aligned_cols=151 Identities=23% Similarity=0.310 Sum_probs=124.9
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..+.|+..+.||+|+||.||+|... +++.||||.+.... ..+.+.+|+.++++++||||+++++++.. ....+++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 102 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK--NTDLWIV 102 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCEEEEE
Confidence 4567899999999999999999976 58899999997643 34668899999999999999999999874 4467889
Q ss_pred ecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 230 SCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 230 ~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||++++++.+ ...++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 103 MEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp EECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred eecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 99999876544 4469999999999999 889999999999999999999999999988542
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+.+
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 8889999999998864
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-27 Score=203.28 Aligned_cols=150 Identities=16% Similarity=0.127 Sum_probs=126.4
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|+..+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+++++++ +|+|++++++++. .....++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--~~~~~~l 83 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--EGLHNVL 83 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--ETTEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC--CCceeEE
Confidence 345799999999999999999996 468889999987543 234578899999999 7999999999886 4456788
Q ss_pred EecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc-----eEEccccchh
Q 036266 229 SSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV-----AHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~-----~kl~DFG~a~ 290 (312)
+|||+ ++++. ++..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+
T Consensus 84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 88899 66554 44579999999999999 899999999999999987765 9999999875
Q ss_pred hh-------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL-------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~-------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 220 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcch
Confidence 31 8999999999999865
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-27 Score=209.88 Aligned_cols=153 Identities=18% Similarity=0.135 Sum_probs=121.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhhhH-----------hHHHHHHHHHHhhcCCCCceeeeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQLER-----------AFRSFDSKCEVHKNVRHRNLIKILT 216 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 216 (312)
.++|...+.||+|+||.||+|... ++..||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 457899999999999999999975 4567999998754211 1234667889999999999999999
Q ss_pred eeeec--ccccEEEEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC--c
Q 036266 217 TIAIL--ILKPWYLSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM--V 280 (312)
Q Consensus 217 ~~~~~--~~~~~~l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~--~ 280 (312)
++... .....+++|||+ +++ +.+++.++.|++.||+||| +.+|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 98752 256789999999 664 4556689999999999999 88999999999999998777 9
Q ss_pred eEEccccchhhh-------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 281 AHVSDFNISKLL-------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 281 ~kl~DFG~a~~~-------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+||+|||+|+.+ |++++|++||+.||.+
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999999998421 8999999999999954
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=200.03 Aligned_cols=154 Identities=24% Similarity=0.390 Sum_probs=130.5
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
...++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++. .....
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~ 96 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE--DSSSF 96 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe--CCCeE
Confidence 34568999999999999999999976 68899999997643 234567889999999999999999999987 34567
Q ss_pred EEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC---CceEEccccchhh
Q 036266 227 YLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED---MVAHVSDFNISKL 291 (312)
Q Consensus 227 ~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~---~~~kl~DFG~a~~ 291 (312)
++++||++++++. +...++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 8999999988654 34579999999999999 8899999999999999753 4799999998864
Q ss_pred h----------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
. |++++|+++|+.|+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 2 8888899999988754
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-27 Score=207.33 Aligned_cols=156 Identities=22% Similarity=0.308 Sum_probs=126.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc--CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcC---CCCceeeeeeeeee--
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL--DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAI-- 220 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~-- 220 (312)
...++|+..+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 45678999999999999999999973 57789999997543 12223456777777665 89999999998863
Q ss_pred -cccccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccc
Q 036266 221 -LILKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDF 286 (312)
Q Consensus 221 -~~~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DF 286 (312)
......+++|||+++. +..+...++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 2456688999998842 33445579999999999999 889999999999999999999999999
Q ss_pred cchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 287 NISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 287 G~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+++.. |++++|+++|+.|+..
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 988642 8899999999998854
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=205.12 Aligned_cols=153 Identities=24% Similarity=0.353 Sum_probs=124.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|...+.||+|+||.||+|++. +++.||||.+.... ......+.+|+.++++++||||+++++++.. .
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 105 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--S 105 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--S
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--C
Confidence 4568999999999999999999842 46689999997432 4455678899999999999999999999874 4
Q ss_pred ccEEEEecccCCCCHHH-------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCce
Q 036266 224 KPWYLSSCVMPNGDFPE-------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVA 281 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~-------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~ 281 (312)
...+++|||+++|++.+ ++.++.|++.||+||| +.+|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceE
Confidence 45688889998875544 4568999999999999 889999999999999984 4569
Q ss_pred EEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 282 HVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 282 kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
||+|||+++.. |++++|++| |+.|+..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999998642 888888888 8888754
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=204.75 Aligned_cols=153 Identities=21% Similarity=0.274 Sum_probs=125.4
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHH-HhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCE-VHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|...+.||+|+||.||+|... +++.||||+++... ......+..|+. +++.++||||+++++++.. ....+
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~--~~~~~ 97 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR--EGDCW 97 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC--SSEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe--CCceE
Confidence 3467888999999999999999975 68889999997643 333345556665 7788899999999999874 44678
Q ss_pred EEecccCCC----------------CHHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchh
Q 036266 228 LSSCVMPNG----------------DFPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 228 l~~~~~~~g----------------~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
++|||++++ +.....+++.|++.|+.||| +. +|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 888898853 34455679999999999999 77 99999999999999999999999999885
Q ss_pred hh---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.. |++++|+++|+.|+++
T Consensus 175 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp C------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred ecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 42 8888999999999864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-27 Score=202.58 Aligned_cols=152 Identities=26% Similarity=0.399 Sum_probs=121.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc--CCc--EEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL--DET--NVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
..++|+..+.||+|+||.||+|.+. +++ .||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 93 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-- 93 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC--
Confidence 3467899999999999999999863 233 58999987542 34557789999999999999999999998743
Q ss_pred ccEEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 224 KPWYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
..++++||++++++.+ ...++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 94 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 94 -PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred -CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccc
Confidence 2678889999886544 3469999999999999 8899999999999999999999999999875
Q ss_pred hh---------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 291 LL---------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 291 ~~---------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
.. |++++|+++ |+.|+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 42 889999999 8988854
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=223.59 Aligned_cols=153 Identities=18% Similarity=0.187 Sum_probs=128.7
Q ss_pred ccccccceEeccCCcEEEEEEEEc--CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---cc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL--DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL---KP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 225 (312)
.++|+..+.||+|+||.||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 468999999999999999999975 57889999986432 3455678899999999999999999999875433 22
Q ss_pred EEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 226 WYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 226 ~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
.+++|||++++ ++.+++.++.||+.||+||| +.+||||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 68999999876 56677889999999999999 8899999999999999875 8999999998653
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|..|+..
T Consensus 235 ~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 235 GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcc
Confidence 7777777777766543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7e-26 Score=200.86 Aligned_cols=138 Identities=19% Similarity=0.284 Sum_probs=115.6
Q ss_pred hhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhc--CCCCceeeeeeeeeeccc--c
Q 036266 149 LQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKN--VRHRNLIKILTTIAILIL--K 224 (312)
Q Consensus 149 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~--~ 224 (312)
....++|...+.||+|+||.||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++..... .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 44567899999999999999999987 58899999997542 3456778888876 789999999999875442 3
Q ss_pred cEEEEecccCCCCHHH-----------HHHHHHHHHHHHHHHhCC-----CCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 225 PWYLSSCVMPNGDFPE-----------RLNIMIDMALAFEYLHHG-----RSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~-----------~~~i~~~i~~~l~ylH~~-----~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
..+++|||+++|++.+ ++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+|||+
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 6889999999986654 457999999999999932 146899999999999999999999999998
Q ss_pred hh
Q 036266 289 SK 290 (312)
Q Consensus 289 a~ 290 (312)
++
T Consensus 194 ~~ 195 (342)
T 1b6c_B 194 AV 195 (342)
T ss_dssp CE
T ss_pred ce
Confidence 73
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.7e-26 Score=221.50 Aligned_cols=156 Identities=21% Similarity=0.324 Sum_probs=130.3
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
+.....++|+..+.||+|+||.||+|.+.. +..||||.++... ....+.+.+|+.++++++||||+++++++..
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~- 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE- 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-
Confidence 334455778999999999999999998742 3569999987543 4445778999999999999999999998742
Q ss_pred ccccEEEEecccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 222 ILKPWYLSSCVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
...+++|||+++|++.+ ++.++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+
T Consensus 463 --~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~ 537 (656)
T 2j0j_A 463 --NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGL 537 (656)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCC
T ss_pred --CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCC
Confidence 34788999999986654 3468999999999999 88999999999999999999999999999
Q ss_pred hhhh-------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 289 SKLL-------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 289 a~~~-------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|+.. |++++|+++ |..||.+
T Consensus 538 a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 538 SRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 8642 888888886 8888764
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-27 Score=209.00 Aligned_cols=148 Identities=11% Similarity=0.106 Sum_probs=122.9
Q ss_pred ccccccceEeccCCcEEEEEEEEcC---------CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeee--------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD---------ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKI-------- 214 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-------- 214 (312)
.++|...+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999753 677999999754 457889999999999999984
Q ss_pred -------eeeeeecccccEEEEecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 215 -------LTTIAILILKPWYLSSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 215 -------~~~~~~~~~~~~~l~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
++++.. .....+++|||+ ++++. +++.++.|++.||+||| +.+|+||||||+||
T Consensus 116 ~~~i~~~~~~~~~-~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NI 190 (352)
T 2jii_A 116 LLAIPTCMGFGVH-QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENI 190 (352)
T ss_dssp TCSCCCCCEEEEE-TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGE
T ss_pred ccCccchhhcccc-CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHE
Confidence 444432 245678999999 76544 44579999999999999 88999999999999
Q ss_pred eeCCCC--ceEEccccchhhh-------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 274 LLDEDM--VAHVSDFNISKLL-------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 274 ll~~~~--~~kl~DFG~a~~~-------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+++.++ .+||+|||+|+.+ |++++|+++|+.||..
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999988 9999999998421 8999999999999875
Q ss_pred c
Q 036266 309 M 309 (312)
Q Consensus 309 ~ 309 (312)
.
T Consensus 271 ~ 271 (352)
T 2jii_A 271 C 271 (352)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-26 Score=205.25 Aligned_cols=155 Identities=21% Similarity=0.267 Sum_probs=125.9
Q ss_pred hhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CC-----ceeeeeeeeeecc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HR-----NLIKILTTIAILI 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~~~~~~~~~~ 222 (312)
...++|+..+.||+|+||.||+|... +++.||||+++.. ......+.+|+++++.++ |+ +|+++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-- 127 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF-- 127 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE--
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc--
Confidence 44678999999999999999999976 5778999999754 334456778888888775 44 48999998874
Q ss_pred cccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCCceEEcccc
Q 036266 223 LKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDMVAHVSDFN 287 (312)
Q Consensus 223 ~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~~~kl~DFG 287 (312)
....+++|||+++. ++.....++.|++.||+|||.. +.+|+||||||+|||++ .++.+||+|||
T Consensus 128 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 128 RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 35678888898642 3455567999999999999942 47899999999999994 57889999999
Q ss_pred chhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|+.. |++++|++||+.||..
T Consensus 207 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 207 SSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp TCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 98653 8999999999999864
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.5e-26 Score=199.50 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=122.8
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+|++++++++|++++..+.++.. .....+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA-EGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEE-ETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecC-CCCceEEE
Confidence 456899999999999999999997 467889999876543 22457889999999999988888776643 34567889
Q ss_pred ecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhhh-
Q 036266 230 SCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 230 ~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~~- 292 (312)
|||+ ++++ .++..++.|++.||+||| +.+|+||||||+||++ ++++.+||+|||+|+..
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 6654 445579999999999999 8899999999999999 78899999999988521
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||..
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 217 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence 8999999999999865
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-26 Score=202.31 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=125.5
Q ss_pred hccccccceEeccCCcEEEEEEEE-c-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc------eeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-L-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN------LIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|.. . +++.||||+++.. ....+.+.+|++++++++|++ ++++++++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~-- 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH-- 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE--
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc--
Confidence 346799999999999999999987 3 5778999999754 334567888999998887654 9999998874
Q ss_pred cccEEEEecccCCCC--------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-----------
Q 036266 223 LKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE----------- 277 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~--------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~----------- 277 (312)
....+++|||+ +++ +.+...++.|+++||+||| +.+|+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcc
Confidence 44678888999 453 4455679999999999999 889999999999999987
Q ss_pred --------CCceEEccccchhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 278 --------DMVAHVSDFNISKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 278 --------~~~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
++.+||+|||+|+.. |++++|+++|+.|++.
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 236 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 668999999998753 8899999999998864
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=199.46 Aligned_cols=153 Identities=24% Similarity=0.262 Sum_probs=118.0
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
..++|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.++..+++.++||||+++++++.. ....+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~--~~~~~ 100 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT--NTDVF 100 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--SSEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--CCcEE
Confidence 4567888999999999999999975 68899999997643 2223334455567888899999999999874 44678
Q ss_pred EEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++|||+... +......++.|+++||+||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 101 IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 888998421 44556689999999999999 74 9999999999999999999999999988532
Q ss_pred --------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.|+..
T Consensus 178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 7888899999988864
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-26 Score=200.81 Aligned_cols=140 Identities=20% Similarity=0.255 Sum_probs=116.2
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCC--CCceeeeeeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVR--HRNLIKILTTIAI 220 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~ 220 (312)
+..+.....+|+..+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ ||||+++++++..
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 344445667899999999999999999998888999999997542 445677899999999997 5999999999874
Q ss_pred cccccEEEEecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 221 LILKPWYLSSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
....+++||+ .+++ ..++..++.|+++||+||| +.+|+||||||+||++++ +.+||+|||+
T Consensus 100 --~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 100 --DQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp --SSEEEEEECC-CSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred --CCEEEEEEec-CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccc
Confidence 4457888884 4444 3455679999999999999 889999999999999965 8999999998
Q ss_pred hhh
Q 036266 289 SKL 291 (312)
Q Consensus 289 a~~ 291 (312)
++.
T Consensus 173 ~~~ 175 (313)
T 3cek_A 173 ANQ 175 (313)
T ss_dssp SCC
T ss_pred ccc
Confidence 753
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.7e-26 Score=202.19 Aligned_cols=151 Identities=17% Similarity=0.267 Sum_probs=125.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CC-cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc------eeeeeeeeeeccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DE-TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN------LIKILTTIAILIL 223 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~~ 223 (312)
.++|+..+.||+|+||.||+|... ++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++.. .
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~--~ 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF--H 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE--T
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee--C
Confidence 467999999999999999999975 34 67999999754 334566788999999987766 8888888774 4
Q ss_pred ccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---------------
Q 036266 224 KPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL--------------- 275 (312)
Q Consensus 224 ~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill--------------- 275 (312)
...+++|||+.++ ++.+...++.|++.||+||| +.+|+||||||+||++
T Consensus 95 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 95 GHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred CeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccc
Confidence 4678888999543 34556689999999999999 8999999999999999
Q ss_pred ----CCCCceEEccccchhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 276 ----DEDMVAHVSDFNISKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 276 ----~~~~~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.++.+||+|||+|+.. |++++|+++|+.||..
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 56789999999998642 8899999999999864
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-26 Score=197.51 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=126.2
Q ss_pred hccccccceEeccCCcEEEEEEEE-cCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIF-LDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.++++++|++++..+.++.. .....+++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~-~~~~~~lv 83 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGA-EGDYNVMV 83 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEE-ETTEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccC-CCCceEEE
Confidence 456799999999999999999997 468889999987543 23468899999999999988877766643 34567889
Q ss_pred ecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhhh-
Q 036266 230 SCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 230 ~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~~- 292 (312)
|||+ ++++. +...++.|++.||+||| +.+|+||||||+||++ ++++.+||+|||+|+..
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 9999 66554 44579999999999999 8899999999999999 47889999999987531
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||.+
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 217 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 8999999999999865
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=203.01 Aligned_cols=156 Identities=25% Similarity=0.268 Sum_probs=120.2
Q ss_pred HhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcC----CCCceeeeee
Q 036266 148 ILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNV----RHRNLIKILT 216 (312)
Q Consensus 148 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~~~~ 216 (312)
.....++|+..+.||+|+||.||+|... +++.||||+++.... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999864 678899999975431 1233456788888888 8999999999
Q ss_pred eeeecccccEEEEecc-cCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceE
Q 036266 217 TIAILILKPWYLSSCV-MPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAH 282 (312)
Q Consensus 217 ~~~~~~~~~~~l~~~~-~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~k 282 (312)
++... ...++++|+ +.++++. ++..++.|+++||+||| +.+|+||||||+||+++ .++.+|
T Consensus 106 ~~~~~--~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQ--EGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEecC--CeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 98743 445677777 6666544 44569999999999999 88999999999999999 889999
Q ss_pred Eccccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 283 VSDFNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 283 l~DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+|||+++.. |++++|+++|+.|+..
T Consensus 181 l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp ECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 9999987642 8999999999999853
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=202.38 Aligned_cols=157 Identities=22% Similarity=0.229 Sum_probs=127.6
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcCC--CCceeeeeee
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVR--HRNLIKILTT 217 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~~~~~ 217 (312)
......++|+..+.||+|+||.||+|... +++.||||+++.... .....+.+|+.++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445678999999999999999999964 678899999976531 12245678999999996 5999999999
Q ss_pred eeecccccEEEEecccCC-CCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC-CCCceEE
Q 036266 218 IAILILKPWYLSSCVMPN-GDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHV 283 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~-g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~-~~~~~kl 283 (312)
+.. ....++++|++.+ +++ .....++.|+++||+||| +.+|+||||||+||+++ +++.+||
T Consensus 117 ~~~--~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 117 FER--PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp EEC--SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEE
T ss_pred Eec--CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEE
Confidence 874 4457788888875 444 445579999999999999 89999999999999999 7899999
Q ss_pred ccccchhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 284 SDFNISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 284 ~DFG~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+|||+++.. |++++|+++|+.|+..
T Consensus 192 ~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 192 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred eeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 999987642 8899999999998753
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-26 Score=204.22 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=124.7
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-----------CCceeeeeeeee
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-----------HRNLIKILTTIA 219 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~ 219 (312)
..+|...+.||+|+||.||+|+.. +++.||||++.... .....+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 467999999999999999999974 67889999997542 34466788999988876 899999999986
Q ss_pred ec--ccccEEEEecccCCCC--------------HHHHHHHHHHHHHHHHHHhCCCCC-CceecCCCCCCeeeC------
Q 036266 220 IL--ILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHGRST-PMVHCDLKPSNNLLD------ 276 (312)
Q Consensus 220 ~~--~~~~~~l~~~~~~~g~--------------~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrDlkp~Nill~------ 276 (312)
.. ....++++||++ +++ +.....++.|++.||+||| +. +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 43 334688999988 543 4445679999999999999 76 999999999999994
Q ss_pred CCCceEEccccchhhh---------------------------------hhhhhhhhcCCCCCcc
Q 036266 277 EDMVAHVSDFNISKLL---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 277 ~~~~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p~~e 308 (312)
..+.+||+|||+|+.. |++++|++||+.||..
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4458999999998643 8999999999999863
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=210.82 Aligned_cols=151 Identities=19% Similarity=0.234 Sum_probs=123.2
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|...+.||+|+||.||+|.+. +++.||||++..... ...+.+|+++++.++|++.+..+.++.. .....+++|
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~-~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGV-EGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEE-ETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEe-eCCEEEEEE
Confidence 467999999999999999999974 688999999875432 2457889999999987555554444432 345678888
Q ss_pred cccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeee---CCCCceEEccccchhhh--
Q 036266 231 CVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLL---DEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 231 ~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill---~~~~~~kl~DFG~a~~~-- 292 (312)
||+ ++++ .+++.|+.||+.||+||| +.+||||||||+|||+ +.++.+||+|||+|+.+
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 898 6644 455679999999999999 8899999999999999 58899999999998531
Q ss_pred -----------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 -----------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 -----------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|+++|+.||.+.
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~ 216 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 99999999999999763
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-26 Score=207.68 Aligned_cols=129 Identities=21% Similarity=0.252 Sum_probs=106.0
Q ss_pred ccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEEEecc
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++. ....++++|||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~--~~~~~~lv~E~ 90 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSET--TDRFLYIALEL 90 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEE--CSSEEEEEECC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEe--cCCeEEEEEec
Confidence 344567899999999987666679999999997543 34567899999876 8999999999876 45568899999
Q ss_pred cCCCCHHHH-------------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-------------Cc
Q 036266 233 MPNGDFPER-------------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-------------MV 280 (312)
Q Consensus 233 ~~~g~~~~~-------------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-------------~~ 280 (312)
++ |++.+. +.++.||+.||+||| +.+|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 455443 348999999999999 8899999999999999654 48
Q ss_pred eEEccccchhh
Q 036266 281 AHVSDFNISKL 291 (312)
Q Consensus 281 ~kl~DFG~a~~ 291 (312)
+||+|||+|+.
T Consensus 167 ~kL~DFG~a~~ 177 (434)
T 2rio_A 167 ILISDFGLCKK 177 (434)
T ss_dssp EEECCCTTCEE
T ss_pred EEEccccccee
Confidence 99999998753
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=197.05 Aligned_cols=151 Identities=23% Similarity=0.298 Sum_probs=119.8
Q ss_pred hccccccc-eEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccE
Q 036266 151 ATDEFNEW-HLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPW 226 (312)
Q Consensus 151 ~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~ 226 (312)
..++|... +.||+|+||.||+|.+. +++.||||++.... ... .+....++.++||||+++++++... .....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-KAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-HHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-HHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 45678875 46999999999999976 68899999997542 111 2223345667899999999998642 24558
Q ss_pred EEEecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccch
Q 036266 227 YLSSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNIS 289 (312)
Q Consensus 227 ~l~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a 289 (312)
+++|||+++|++. +...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 8999999987554 44579999999999999 889999999999999975 456999999988
Q ss_pred hhh----------------------------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.. |++++|+++|+.|+..
T Consensus 179 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (336)
T 3fhr_A 179 KETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231 (336)
T ss_dssp EEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred eeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 542 8999999999999853
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-26 Score=202.97 Aligned_cols=137 Identities=18% Similarity=0.330 Sum_probs=112.7
Q ss_pred HHHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc
Q 036266 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL 223 (312)
Q Consensus 146 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 223 (312)
.+.....++|+..+.||+|+||.||+|.... .||+|+++... ....+.+.+|+.++++++||||+++++++.. .
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS--P 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC--S
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec--C
Confidence 4444566789999999999999999998743 49999987542 2233557789999999999999999999874 4
Q ss_pred ccEEEEecccCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 224 KPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
...+++|||++++++ .+...++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFS 177 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred CceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcc
Confidence 458899999988754 445679999999999999 88999999999999998 6799999999754
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-26 Score=206.72 Aligned_cols=133 Identities=23% Similarity=0.304 Sum_probs=107.5
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~l 228 (312)
....+|...+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +|||||++++++. +....++
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~--~~~~~~l 95 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEK--DRQFQYI 95 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEE--ETTEEEE
T ss_pred EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEe--cCCEEEE
Confidence 34557888999999999997655556789999999975432 2356799999999 7999999999887 4456788
Q ss_pred EecccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-----CCceEEccccchh
Q 036266 229 SSCVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-----DMVAHVSDFNISK 290 (312)
Q Consensus 229 ~~~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-----~~~~kl~DFG~a~ 290 (312)
+|||++ |++.+. +.++.|++.||+||| +.+|+||||||+||+++. ...+||+|||+|+
T Consensus 96 v~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp EEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred EEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 899997 455443 469999999999999 889999999999999942 3468899999875
Q ss_pred h
Q 036266 291 L 291 (312)
Q Consensus 291 ~ 291 (312)
.
T Consensus 172 ~ 172 (432)
T 3p23_A 172 K 172 (432)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.1e-26 Score=216.62 Aligned_cols=154 Identities=25% Similarity=0.336 Sum_probs=128.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeee----ccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAI----LILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~----~~~~~ 225 (312)
.++|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.. .....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999974 57889999987542 4455678999999999999999999998753 12456
Q ss_pred EEEEecccCCCCHHHH---------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc---eEEcccc
Q 036266 226 WYLSSCVMPNGDFPER---------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV---AHVSDFN 287 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~---------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~---~kl~DFG 287 (312)
.+++|||+++|++.+. ..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 7889999999877654 369999999999999 889999999999999996664 9999999
Q ss_pred chhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+++.. |++++|+++|..||..
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 98663 8999999999999853
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.9e-25 Score=189.13 Aligned_cols=145 Identities=12% Similarity=0.077 Sum_probs=115.6
Q ss_pred HHhhhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhh------------------HhHHHHHHHHHHhhcCCC
Q 036266 147 DILQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE------------------RAFRSFDSKCEVHKNVRH 208 (312)
Q Consensus 147 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h 208 (312)
.+......|...+.||+|+||.||+|.+.+++.||||.++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 33444556677799999999999999997788999999964321 23456889999999998
Q ss_pred CceeeeeeeeeecccccEEEEecccCCCCHHH-----HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEE
Q 036266 209 RNLIKILTTIAILILKPWYLSSCVMPNGDFPE-----RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHV 283 (312)
Q Consensus 209 ~niv~~~~~~~~~~~~~~~l~~~~~~~g~~~~-----~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl 283 (312)
| +++.+++.. ...+++|||+++|++.+ ...++.|++.|++||| +.+|+||||||+|||++ ++.+||
T Consensus 163 -~-~~v~~~~~~---~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 163 -G-LAVPKVYAW---EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp -T-SSSCCEEEE---ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEE
T ss_pred -C-CCcCeEEec---cceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEE
Confidence 4 666665532 34589999999987754 4579999999999999 89999999999999999 999999
Q ss_pred ccccchhhh-hhhhhhhhc
Q 036266 284 SDFNISKLL-GVLLPETFT 301 (312)
Q Consensus 284 ~DFG~a~~~-g~~~~e~~t 301 (312)
+|||+|+.. ...++|++.
T Consensus 234 ~DFG~a~~~~~~~a~e~l~ 252 (282)
T 1zar_A 234 IDFPQSVEVGEEGWREILE 252 (282)
T ss_dssp CCCTTCEETTSTTHHHHHH
T ss_pred EECCCCeECCCCCHHHHHH
Confidence 999999876 345566554
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=196.02 Aligned_cols=154 Identities=14% Similarity=0.143 Sum_probs=112.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCC-Cceeeeeee--------
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRH-RNLIKILTT-------- 217 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~~~~~-------- 217 (312)
....|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.+++.++| +|......+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 4456788899999999999999965 68899999987432 2335678899999999987 322211111
Q ss_pred -------------eeecc---cccEEEEecccCCCCH-------------------HHHHHHHHHHHHHHHHHhCCCCCC
Q 036266 218 -------------IAILI---LKPWYLSSCVMPNGDF-------------------PERLNIMIDMALAFEYLHHGRSTP 262 (312)
Q Consensus 218 -------------~~~~~---~~~~~l~~~~~~~g~~-------------------~~~~~i~~~i~~~l~ylH~~~~~~ 262 (312)
+.... ...++++|+.+ .+++ ..++.++.|+++||+||| +.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 11000 12344444433 2332 345568899999999999 899
Q ss_pred ceecCCCCCCeeeCCCCceEEccccchhh------------------------------------------hhhhhhhhh
Q 036266 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKL------------------------------------------LGVLLPETF 300 (312)
Q Consensus 263 iiHrDlkp~Nill~~~~~~kl~DFG~a~~------------------------------------------~g~~~~e~~ 300 (312)
|+||||||+|||++.++.+||+|||+|+. +|++++|++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999641 288899999
Q ss_pred cCCCCCcc
Q 036266 301 TRKKPTIE 308 (312)
Q Consensus 301 tg~~p~~e 308 (312)
||+.||..
T Consensus 312 tg~~Pf~~ 319 (413)
T 3dzo_A 312 CADLPNTD 319 (413)
T ss_dssp HSSCCCCT
T ss_pred HCCCCCCC
Confidence 99999864
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-24 Score=202.14 Aligned_cols=128 Identities=16% Similarity=0.109 Sum_probs=99.4
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..+.||+|+||.||+|.. .++.+|+|+..... ....+.+.+|++++++++||||+++..++.. ....++
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--~~~~~l 416 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD--LDNKRI 416 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE--TTTTEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe--CCccEE
Confidence 356899999999999954 56789999864321 1224568999999999999999965555442 334588
Q ss_pred EecccCCCCHHHHH----HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 229 SSCVMPNGDFPERL----NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~----~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||++++++.+.+ .++.|+++||+||| +.+|+||||||+|||+++ .+||+|||+|+..
T Consensus 417 VmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 417 MMSYINGKLAKDVIEDNLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp EEECCCSEEHHHHSTTCTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999998765 79999999999999 899999999999999998 9999999999764
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=197.50 Aligned_cols=115 Identities=39% Similarity=0.572 Sum_probs=105.0
Q ss_pred CCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEE
Q 036266 25 LKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELN 104 (312)
Q Consensus 25 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 104 (312)
+++|+.|||++|+++|.+|..++.+++|+.|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+..+++|++|+
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 56788888888889899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCceeeccCCCCccCCCcccccccccccccccCC
Q 036266 105 VSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQD 139 (312)
Q Consensus 105 l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~~~~ 139 (312)
+++|+++|.+|....+.++....+.+|+.+|+.+.
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCC
Confidence 99999999999888888888889999999998653
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-21 Score=162.78 Aligned_cols=129 Identities=14% Similarity=0.108 Sum_probs=99.6
Q ss_pred ccccceEeccCCcEEEEEEEE-cCCcE--EEEEEeehhhh------------------------HhHHHHHHHHHHhhcC
Q 036266 154 EFNEWHLLGTESLGSVYKWIF-LDETN--VAIKVFNLQLE------------------------RAFRSFDSKCEVHKNV 206 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l 206 (312)
-|...+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|++.++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999997 67888 99998754311 1123578899999999
Q ss_pred CCCce--eeeeeeeeecccccEEEEecccCC-C----CHH---------HHHHHHHHHHHHHHHHhCCCCCCceecCCCC
Q 036266 207 RHRNL--IKILTTIAILILKPWYLSSCVMPN-G----DFP---------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKP 270 (312)
Q Consensus 207 ~h~ni--v~~~~~~~~~~~~~~~l~~~~~~~-g----~~~---------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp 270 (312)
+|+++ ..++++ ...+++|||+.+ | ++. +...++.|++.|+.|||. +.+|+||||||
T Consensus 128 ~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp 199 (258)
T 1zth_A 128 KEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQ--EAELVHADLSE 199 (258)
T ss_dssp HHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCST
T ss_pred HhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCH
Confidence 88864 233321 245788889942 3 343 345799999999999993 45899999999
Q ss_pred CCeeeCCCCceEEccccchhhh
Q 036266 271 SNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 271 ~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+|||+++ .++|+|||+|...
T Consensus 200 ~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TSEEESS--SEEECCCTTCEET
T ss_pred HHEEEcC--cEEEEECcccccC
Confidence 9999998 9999999998764
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=8.7e-23 Score=189.60 Aligned_cols=215 Identities=16% Similarity=0.048 Sum_probs=144.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCcc-CCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITIS-GLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|.|++..|..++++++|+.|+|++|.+++.+|..+. .+++|++|+|++|.+++. | .+..+++|+.|
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L 196 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTL 196 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-c-ccccCCCCCEE
Confidence 46789999999999988888999999999999999999998888876 799999999999999865 3 24468999999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccccCCC---CCchHHHHhhh-----
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQDS---KRTSYLDILQA----- 151 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~~~~~---~~~~~~~~~~~----- 151 (312)
+|++|++++ +|..+..+++|+.|++++|.+++.++....+.++..+.+.+|+..|+.... .......+...
T Consensus 197 ~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~ 275 (487)
T 3oja_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (487)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccc
Confidence 999999996 555699999999999999999975555556678888999998877553311 11111111110
Q ss_pred --ccccccceEeccCCcEEEEEEEEcCCcE-----EEEEEeehh--hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec
Q 036266 152 --TDEFNEWHLLGTESLGSVYKWIFLDETN-----VAIKVFNLQ--LERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL 221 (312)
Q Consensus 152 --~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-----vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 221 (312)
...+... ....+..+.++.+ ..+.. +++|+.... .....++|..|++.+.+++|+|+|++.|||...
T Consensus 276 ~~~~~~~c~-~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 276 TGQNEEECT-VPTLGHYGAYCCE--DLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp TSSSSCCCS-STTCEEETTEEEC--CCSCHHHHHHHHHHHHHHCSCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred cCCCccccc-CCccccccccccc--cccchhhhHHHHHHHHhhhhcccccHHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 1111000 0000000011111 11111 111111100 012356799999999999999999999998643
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=155.52 Aligned_cols=135 Identities=27% Similarity=0.343 Sum_probs=122.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|+++...+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 47899999999999888889999999999999999999999999999999999999999999666667899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~~ 136 (312)
++|++++..|..|..+++|++|++++|++++..+. ...+.++..+.+.+|+..|.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999988899999999999999999999977665 34577888899999987764
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=165.65 Aligned_cols=135 Identities=32% Similarity=0.461 Sum_probs=103.7
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.|+|++|++++.+|..+..++ |+.|++++|++.+.+|..|..+++|++|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 455555555555555555555554 66666666666666667777777778888888877755554 7778889999999
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccccCC
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQD 139 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~~~~ 139 (312)
+|++++.+|.++..+++|++|++++|+++|.+|....+.++..+.+.+|+.+|+.+.
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCC
Confidence 999988899999999999999999999999999887788888899999998887543
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.3e-20 Score=153.22 Aligned_cols=134 Identities=22% Similarity=0.229 Sum_probs=120.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|++..|..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 57999999999999988999999999999999999998777778899999999999999999777778899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~~ 136 (312)
++|+|+ .+|..+..+++|++|++++|++++..+. ...+.++..+.+.+|+..|.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999 7899999999999999999999965554 34567888888888886664
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.83 E-value=6.7e-20 Score=155.54 Aligned_cols=134 Identities=25% Similarity=0.283 Sum_probs=74.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|++..|..|.++++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 45555555555555555555555555555555555555555555555555666666666555444444555566666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALC 135 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~ 135 (312)
++|++++..|..|..+++|++|++++|++++..|. ...+.++..+.+.+|+..|
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 66666544444555566666666666666544432 2234455555555555433
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.8e-20 Score=152.48 Aligned_cols=135 Identities=21% Similarity=0.271 Sum_probs=121.6
Q ss_pred CCCcEEeecCCcccccCc-cccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLP-SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+.++.|+|++|+|++..| ..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 357899999999997765 4589999999999999999988888999999999999999999988888899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~ 136 (312)
|++|++++..|..|..+++|++|++++|++++..|.. ..+.++..+.+.+|+..|.
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999999888999999999999999999999887754 4577888889999986664
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=162.81 Aligned_cols=131 Identities=32% Similarity=0.478 Sum_probs=93.9
Q ss_pred CCCcEEeecCCcccc--cCccccccCCCCCEEeccC-CcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCE
Q 036266 2 EYILQINLFSNSLSG--SLPSNIQNLKVLIGLDLSI-NRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEF 78 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 78 (312)
.+++.|+|++|+++| .+|..|.++++|+.|++++ |.+.+.+|..|+++++|++|+|++|++++.+|..|+.+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 356777777777777 6777777777777777773 7777777777777777777777777777777777777777777
Q ss_pred EeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCC-Ccccccccccc
Q 036266 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFG-NFSSQSFISNY 132 (312)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~-~l~~l~~~~n~ 132 (312)
|+|++|++++.+|..+..+++|++|++++|.+++.+|.. ..+. .+..+.+.+|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 777777777777777777777777777777777666643 2233 55556555554
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=153.75 Aligned_cols=136 Identities=26% Similarity=0.196 Sum_probs=98.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..|..|.++++|+.|++++|++.+..|..|..+++|++|++++|++++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 45677777777777766666677777777777777777766666677777777777777777766666677777788888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~ 136 (312)
+++|++++..|..+..+++|++|++++|++++.+|.. ..+.++..+.+.+|+..|.
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 8888777666666777777888888888777665543 4566777777777765543
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-19 Score=177.66 Aligned_cols=135 Identities=32% Similarity=0.501 Sum_probs=101.8
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCc----------------------------------
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITI---------------------------------- 46 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~---------------------------------- 46 (312)
+++|+.|+|++|+++|.+|..++++++|+.|++++|.++|.+|..+
T Consensus 513 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 3567777777777777777777777777777777777766555433
Q ss_pred ------------------------------------cCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCc
Q 036266 47 ------------------------------------SGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKI 90 (312)
Q Consensus 47 ------------------------------------~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 90 (312)
..+++|++|+|++|+++|.+|..++.+++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 33466778888888888888888888888888888888888888
Q ss_pred chhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccccccc
Q 036266 91 PKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 91 p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~ 136 (312)
|..++++++|+.|++++|+++|.+|.. ..+..+..+++..|. +.+
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~-l~g 718 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN-LSG 718 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE-EEE
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc-ccc
Confidence 888888888888888888888888864 345667777777776 444
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.80 E-value=5e-19 Score=145.81 Aligned_cols=135 Identities=24% Similarity=0.188 Sum_probs=118.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|++.+..+..|..+++|++|++++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 57999999999999777777899999999999999999877778899999999999999999777777899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~~ 136 (312)
++|++++..|..+..+++|++|++++|++++..+. ...+.++..+.+.+|...+.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 99999977777789999999999999999966654 34577888888888875543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=150.17 Aligned_cols=115 Identities=25% Similarity=0.298 Sum_probs=108.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 57899999999999988888999999999999999999998888899999999999999999988899999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999986443
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-19 Score=153.67 Aligned_cols=135 Identities=30% Similarity=0.276 Sum_probs=108.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|+ .+|..+..+++|+.|++++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 76 l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 467888888888887 7787888888888999999988877778888888999999999988877677788888899999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~ 136 (312)
|++|+|++..+..|..+++|+.|++++|+++...+.......+..+.+.+|+..|.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 99999886555667788889999999998884444444556677788888887664
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.79 E-value=8.1e-19 Score=148.85 Aligned_cols=131 Identities=25% Similarity=0.242 Sum_probs=116.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|+.|+|++|++.+..|..|..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 46899999999999888888999999999999999999988888999999999999999999777788999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..|..+++|++|++++|.+++..|. ...+.++..+.+.+|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99999977777788999999999999999966663 3456788888887775
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.7e-19 Score=145.68 Aligned_cols=128 Identities=24% Similarity=0.274 Sum_probs=74.3
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCc-CccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccC
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPI-TISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 83 (312)
+.+++++|+|+ .+|..+.. +|+.|++++|++.+..|. .|..+++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45666666664 55554433 566666666666554443 356666666666666666655566666666666666666
Q ss_pred CccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccc
Q 036266 84 NNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALC 135 (312)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~ 135 (312)
|+|++..|..|..+++|++|++++|++++.+|.. ..+.++..+.+.+|+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 6666555555666666666666666666555532 234455555555555433
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.79 E-value=7.3e-19 Score=146.20 Aligned_cols=112 Identities=23% Similarity=0.289 Sum_probs=105.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 57899999999999988899999999999999999999977777789999999999999999988899999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
|++|++++..|..|..+++|+.|++++|.+..
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999998778889999999999999999974
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=148.03 Aligned_cols=131 Identities=24% Similarity=0.242 Sum_probs=76.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|++|+|++|++++..+..|.++++|++|++++|++.+..+..|..+++|++|++++|++++..|..|+.+++|++|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 35666666666666644444456666666666666666655555566666666666666666655555566666666666
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISN 131 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n 131 (312)
|++|++++..+..|..+++|+.|++++|.+++..+.. ..+.++..+.+.+|
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 6666666444444556666666666666665443321 23344444444444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=141.16 Aligned_cols=128 Identities=24% Similarity=0.265 Sum_probs=101.3
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCC
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 84 (312)
+.+++++|.|+ .+|..+. ++|+.|++++|+++ .+|..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56788888888 6776554 47888888888887 67788888888888888888888777778888888888888888
Q ss_pred ccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccccc
Q 036266 85 NLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 85 ~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~~ 136 (312)
+|++..|..|..+++|++|++++|+++...+. ...+.++..+.+.+|+..|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 88877777888888888888888888855543 24567777888888876663
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.77 E-value=4.8e-19 Score=138.06 Aligned_cols=112 Identities=22% Similarity=0.212 Sum_probs=102.9
Q ss_pred CCCcEEeecCCccc-ccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLS-GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.+.+. ..+..+++|++|++++|++++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57999999999999 88999999999999999999999976 7899999999999999999987999898999999999
Q ss_pred ccCCccCCC-cchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGK-IPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
+++|++++. .|..+..+++|++|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999963 45889999999999999999986554
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=150.89 Aligned_cols=131 Identities=26% Similarity=0.315 Sum_probs=85.3
Q ss_pred CCCCcEEeecCCc-ccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNS-LSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|. +++..|..|..+++|+.|++++|.+.+..|..+.++++|++|++++|++++..+..|+.+++|+.|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 3567777777775 665556667777777777777777776666667777777777777777775555556677777777
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISN 131 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n 131 (312)
+|++|++++..+..+..+++|++|++++|.+++..|.. ..+.++..+.+.+|
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 77777776544455666777777777777766654432 23344555554444
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.77 E-value=8.4e-19 Score=139.49 Aligned_cols=129 Identities=20% Similarity=0.133 Sum_probs=113.3
Q ss_pred CCCcEEeecCCccc-ccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLS-GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|+++ +.+|..+..+++|+.|++++|.+.+. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67999999999998 88999999999999999999999965 7899999999999999999988898888899999999
Q ss_pred ccCCccCCCc-chhHhhcCCCcEEEeeCceeeccCC----CCccCCCcccccccccc
Q 036266 81 LSSNNLSGKI-PKSLEALSNLKELNVSYNRLEGEIP----TNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~~~~~~p----~~~~~~~l~~l~~~~n~ 132 (312)
|++|++++.. +..+..+++|++|++++|.+++..+ ....++++..+.+.+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999999632 2789999999999999999996655 23456777777776664
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=138.13 Aligned_cols=129 Identities=26% Similarity=0.247 Sum_probs=89.9
Q ss_pred CcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccC
Q 036266 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 83 (312)
.+.+++++|+++ .+|..+. ++|+.|++++|++.+..+..|..+++|++|++++|++++..+..|..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 356777777777 5554443 5777778888877766666677777788888888877755556677777788888888
Q ss_pred CccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccc
Q 036266 84 NNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALC 135 (312)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~ 135 (312)
|++++..|..+..+++|++|++++|.+++..+.. ..+.++..+.+.+|+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 8777666666777777888888878777544433 345667777777766443
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-18 Score=140.18 Aligned_cols=114 Identities=27% Similarity=0.314 Sum_probs=106.5
Q ss_pred CCCcEEeecCCcccccCcc-ccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPS-NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|+|++..|. .|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+
T Consensus 29 ~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 108 (192)
T 1w8a_A 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEE
Confidence 3789999999999976664 489999999999999999999999999999999999999999988888899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|++++..|..+..+++|++|++++|.+++..+
T Consensus 109 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99999999889999999999999999999987654
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.8e-18 Score=152.47 Aligned_cols=130 Identities=18% Similarity=0.223 Sum_probs=81.0
Q ss_pred CCCCcEEeecCCcccccCcccccc---------CCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCcccc
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQN---------LKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFE 71 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 71 (312)
+++|+.|+|++|++.+.+|..+.. +++|+.|++++|+++ .+|..++.+++|++|+|++|+++ .+|..++
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~ 226 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIH 226 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhc
Confidence 356666666666666666665543 666666666666666 56666666666666666666666 3555566
Q ss_pred CCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccc
Q 036266 72 SLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
.+++|++|+|++|++.+.+|..+..+++|++|++++|++.+.+|.. ..+.++..+.+.+|+
T Consensus 227 ~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 227 HLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp GCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred cCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCC
Confidence 6666666666666666666666666666666666666666666643 344555555555554
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.5e-18 Score=139.53 Aligned_cols=115 Identities=25% Similarity=0.226 Sum_probs=104.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 57899999999999977777789999999999999999987777889999999999999999977777799999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|++++..+..+..+++|++|++++|.+.+..|
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 99999997777778999999999999999886655
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-18 Score=154.03 Aligned_cols=106 Identities=25% Similarity=0.372 Sum_probs=54.0
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+++.|+|++|+++ .+|..+.++++|++|+|++|.+. .+|..++++++|++|+|++|+++ .+|..++.+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 4455555555555 44444555555555555555555 45555555555555555555555 445555555555555555
Q ss_pred CCccCCCcchhHhh---------cCCCcEEEeeCceee
Q 036266 83 SNNLSGKIPKSLEA---------LSNLKELNVSYNRLE 111 (312)
Q Consensus 83 ~N~l~~~~p~~~~~---------l~~L~~L~l~~N~~~ 111 (312)
+|++.+.+|..+.. +++|++|++++|.++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 196 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR 196 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC
Confidence 55444444444332 445555555555444
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-18 Score=144.75 Aligned_cols=130 Identities=25% Similarity=0.297 Sum_probs=104.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++ ++ .+..+++|++|++++|.+++..|..|..+++|++|++++|++++..|..|+.+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 4778888888888885 33 688888888888888888877777788888888888888888877777788888888888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
+++|++++..|..+..+++|+.|++++|++++..|.. ..+.++..+.+.+|.
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 8888888766777788888888888888888665543 456677777777665
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.5e-18 Score=158.08 Aligned_cols=136 Identities=25% Similarity=0.203 Sum_probs=124.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++.+|..+..+++|+.|++++|++.+..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 57999999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCAH 137 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 137 (312)
++|++++..|.+|..+++|++|++++|++++..+.. ..+.++..+.+.+|+..|..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999888999999999999999999999755543 46778899999999866653
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.1e-18 Score=143.91 Aligned_cols=131 Identities=25% Similarity=0.267 Sum_probs=114.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..+..|.++++|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46899999999999777778999999999999999999777777899999999999999999777778899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..|..+++|++|++++|.+++..+. ...+.++..+.+.+|.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 99999988888899999999999999999865554 2456778888877765
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-18 Score=154.07 Aligned_cols=131 Identities=11% Similarity=0.061 Sum_probs=93.0
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhh--------------HhHHH--------HHHHHHHhhcCCCCc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLE--------------RAFRS--------FDSKCEVHKNVRHRN 210 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~~~l~~l~h~n 210 (312)
.-|.+...||+|++|.||+|...+|+.||||+++.... ..... ..+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999988899999998754210 00111 233555555554433
Q ss_pred eeeeeeeeeecccccEEEEecccCCCCHH------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-----
Q 036266 211 LIKILTTIAILILKPWYLSSCVMPNGDFP------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----- 279 (312)
Q Consensus 211 iv~~~~~~~~~~~~~~~l~~~~~~~g~~~------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----- 279 (312)
+.....+. ....+++|||++++++. +...++.|++.++.||| +.+||||||||.|||+++++
T Consensus 175 v~vp~p~~----~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~ 247 (397)
T 4gyi_A 175 FPVPEPIA----QSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDP 247 (397)
T ss_dssp CSCCCEEE----EETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCT
T ss_pred CCCCeeee----ccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccc
Confidence 32111111 11236889999877443 33468999999999999 88999999999999998766
Q ss_pred -----ceEEccccchh
Q 036266 280 -----VAHVSDFNISK 290 (312)
Q Consensus 280 -----~~kl~DFG~a~ 290 (312)
.+.|+||+-+-
T Consensus 248 ~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 248 SSITLTPIIIXFPQMV 263 (397)
T ss_dssp TSEEEEEEECCCTTCE
T ss_pred cccccceEEEEeCCcc
Confidence 38999999653
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-18 Score=148.66 Aligned_cols=134 Identities=21% Similarity=0.265 Sum_probs=84.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc-CCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG-DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|.+++..|..+.++++|+.|++++|.+.+ .+|..+..+++|++|++++|++++..|..+..+++|+.|+
T Consensus 126 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 126 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 456666666666666666666666666666666666654 4566666666666666666666655566666666666666
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccC-CCccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPF-GNFSSQSFISNYALC 135 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~-~~l~~l~~~~n~~l~ 135 (312)
|++|++++..+..+..+++|++|++++|.+++..|.. ..+ .++..+.+.+|+..|
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 6666666555556666666666666666666655543 223 256666666665444
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=8.6e-18 Score=136.82 Aligned_cols=110 Identities=30% Similarity=0.375 Sum_probs=103.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47999999999999 88899999999999999999999988899999999999999999999888889999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
++|+|+...+..|..+++|+.|++++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999997666679999999999999999974
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=9.8e-18 Score=144.76 Aligned_cols=131 Identities=24% Similarity=0.189 Sum_probs=101.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCc-CCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|.+.+..|..|.++++|++|++++|. +....|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 467888888888887666778888888888888888887778888888888888888886 6655577788888888888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
+++|++++..|..+..+++|++|++++|.+++..+. ...+.++..+.+.+|.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 888888877777788888888888888888755544 2346667777766664
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.75 E-value=6.6e-18 Score=141.27 Aligned_cols=114 Identities=26% Similarity=0.280 Sum_probs=104.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++..+..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 578999999999998666677899999999999999999888888999999999999999999 8899999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|+|++..+..|..+++|+.|++++|.+.+..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999997777789999999999999999986544
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-18 Score=162.40 Aligned_cols=131 Identities=27% Similarity=0.215 Sum_probs=110.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++++.|||++|+|++..|..|.+|++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999777788999999999999999999888888999999999999999999766778999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeecc-CCCC-ccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGE-IPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~-~p~~-~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..|.++++|++|++++|.+++. +|.. ..+..+..+.+.+|.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 99999976667799999999999999998753 3433 345666666666554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=132.83 Aligned_cols=109 Identities=23% Similarity=0.207 Sum_probs=98.8
Q ss_pred CcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccC
Q 036266 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 83 (312)
.+.+++++|+|+ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 6887664 7999999999999998899999999999999999999977777889999999999999
Q ss_pred CccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 84 NNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|+|++..|..|..+++|++|++++|.++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99997777789999999999999999985544
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.7e-18 Score=151.28 Aligned_cols=110 Identities=25% Similarity=0.200 Sum_probs=71.7
Q ss_pred CCcEEeecCCcccccCccccc-cCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 3 YILQINLFSNSLSGSLPSNIQ-NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.++.|+|++|+|++..+..+. ++++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 356666666666655555555 6666666666666666666666666666666666666666555556666666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
++|+|++..|..|..+++|+.|+|++|++++
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 150 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISR 150 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCe
Confidence 6666665556666666666666666666664
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.1e-18 Score=152.22 Aligned_cols=136 Identities=26% Similarity=0.186 Sum_probs=113.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|++++..|..|..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 57899999999999988888999999999999999999988888999999999999999999988899999999999999
Q ss_pred ccCCccCCCcchhH---hhcCCCcEEEeeCceeeccCCCC-ccCCC--cccccccccccccc
Q 036266 81 LSSNNLSGKIPKSL---EALSNLKELNVSYNRLEGEIPTN-VPFGN--FSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~---~~l~~L~~L~l~~N~~~~~~p~~-~~~~~--l~~l~~~~n~~l~~ 136 (312)
|++|+|++..+..| ..+++|+.|++++|++++..+.. ..+.. +..+.+.+|+..|.
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99999996444444 67999999999999998433221 12222 24567778876664
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6.2e-18 Score=160.96 Aligned_cols=136 Identities=21% Similarity=0.233 Sum_probs=103.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc-CCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG-DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|++++|++++.+|..+.++++|+.|++++|.+.+ .+|..+..+++|++|++++|++++..|..|+.+++|++|
T Consensus 423 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 502 (606)
T 3vq2_A 423 LEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502 (606)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEE
Confidence 4677778888888777777778888888888888888876 367778888888888888888887777788888888888
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCC-Ccccccccccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFG-NFSSQSFISNYALCA 136 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~-~l~~l~~~~n~~l~~ 136 (312)
+|++|++++..|..+..+++|+.|++++|+++...+....+. ++..+.+.+|+..|.
T Consensus 503 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp ECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred ECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 888888887778888888888888888888873333333443 477778888876664
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.8e-18 Score=165.74 Aligned_cols=131 Identities=22% Similarity=0.352 Sum_probs=116.2
Q ss_pred CCCCcEEeecCCccccc-----------------Cccccc--cCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCc
Q 036266 1 LEYILQINLFSNSLSGS-----------------LPSNIQ--NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR 61 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 61 (312)
|++|+.|+|++|+|+|. +|..++ ++++|++|++++|.+.+.+|..|+++++|++|++++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 57899999999999986 999999 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCccccCC------CCCCEEeccCCccCCCcch--hHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 62 -SQG-SIPKSFESL------ASLEFLDLSSNNLSGKIPK--SLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 62 -l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
++| .+|..++.+ ++|+.|+|++|+++ .+|. .+.++++|++|++++|.++|.+|....+.++..+.+.+|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 998 899988876 89999999999999 8888 899999999999999999988885445556666666555
Q ss_pred c
Q 036266 132 Y 132 (312)
Q Consensus 132 ~ 132 (312)
.
T Consensus 364 ~ 364 (636)
T 4eco_A 364 Q 364 (636)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.3e-17 Score=136.08 Aligned_cols=127 Identities=20% Similarity=0.238 Sum_probs=103.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|++++|.++ .+| .+..+++|+.|++++|.+. .+..+..+++|++|++++|++++..|..++.+++|++|++
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 57889999999988 667 6888899999999999765 3346888899999999999988778888888999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..+..+++|++|++++|.+.+.+|....++++..+.+.+|.
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBC
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCC
Confidence 999998878888888999999999988733355655566777777776664
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.72 E-value=3e-17 Score=142.21 Aligned_cols=128 Identities=27% Similarity=0.214 Sum_probs=81.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++++.|+|++|++++..|..|.++++|+.|+|++|.+++..+ . ..+++|++|+|++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 457777777777777667777777777777777777764332 2 56666666666666666 55666666666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..|..+++|++|++++|++++..+.. ..+.++..+.+.+|.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 666666555556666666666666666666443332 234455555555543
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-17 Score=141.38 Aligned_cols=116 Identities=22% Similarity=0.221 Sum_probs=104.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..+..|.++++|+.|++++|.+.+..|..|.++++|++|++++|++++..+..++.+++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 57899999999999987778899999999999999999988888999999999999999999977777899999999999
Q ss_pred ccCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCC
Q 036266 81 LSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 81 l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
+++|++++ .+|..+..+++|++|++++|++++..+.
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 99999986 3689999999999999999999865543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.72 E-value=6.5e-17 Score=129.62 Aligned_cols=114 Identities=25% Similarity=0.267 Sum_probs=103.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|++++..+..|..+++|++|++++|++++..|..+..+++|++|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 57999999999999777778899999999999999999877788899999999999999999777777899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
++|++++..+..+..+++|++|++++|.+++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999997666667889999999999999987655
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-17 Score=130.90 Aligned_cols=106 Identities=24% Similarity=0.275 Sum_probs=95.7
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCC
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 84 (312)
+.+++++|+|+ .+|..+. ++|+.|+|++|++.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 7887775 79999999999999988999999999999999999999766667899999999999999
Q ss_pred ccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 85 NLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 85 ~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
+|++..|..|..+++|++|++++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99976666699999999999999999743
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.9e-18 Score=160.86 Aligned_cols=118 Identities=16% Similarity=0.316 Sum_probs=107.8
Q ss_pred cccccCccccccCCCCCEEeccCCcCCcC-----------------CCcCcc--CCCCCCEEeCCCCcCCCCCCccccCC
Q 036266 13 SLSGSLPSNIQNLKVLIGLDLSINRLYGD-----------------IPITIS--GLKDLTTLFLAGNRSQGSIPKSFESL 73 (312)
Q Consensus 13 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l 73 (312)
+++| +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|+++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4556 899999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEeccCCc-cCC-CcchhHhhc------CCCcEEEeeCceeeccCCC---CccCCCcccccccccc
Q 036266 74 ASLEFLDLSSNN-LSG-KIPKSLEAL------SNLKELNVSYNRLEGEIPT---NVPFGNFSSQSFISNY 132 (312)
Q Consensus 74 ~~L~~L~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~~~~~~p~---~~~~~~l~~l~~~~n~ 132 (312)
++|++|+|++|+ ++| .+|..+..+ ++|++|++++|+++ .+|. ...+.++..+.+.+|.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~ 341 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQ 341 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCC
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCc
Confidence 999999999998 998 899999987 99999999999999 7776 4567788888887765
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-17 Score=151.62 Aligned_cols=117 Identities=23% Similarity=0.208 Sum_probs=110.3
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..|..|.++++|+.|++++|++.+..|..|..+++|++|+|++|++++..|..|..+++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 57899999999999999899999999999999999999998899999999999999999999988899999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~ 117 (312)
|++|++++..+..+..+++|++|++++|++++..|..
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9999999777778899999999999999999888753
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.1e-17 Score=144.04 Aligned_cols=131 Identities=23% Similarity=0.280 Sum_probs=101.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCC-cCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|.++ .+|..+..+++|+.|++++|++.+..+ ..+..+++|++|++++|.+++..|..+..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 467888888888887 567778888888888888888876554 577888888888888888887777788888888888
Q ss_pred eccCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccc
Q 036266 80 DLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 80 ~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
++++|.+++ .+|..+..+++|++|++++|.+++..|.. ..+.++..+.+.+|.
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 210 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCc
Confidence 888888876 57778888888888888888888765543 345667777776664
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-17 Score=134.77 Aligned_cols=127 Identities=22% Similarity=0.273 Sum_probs=112.0
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.++ .+ +.+..+++|++|++++|++.+..|..+..+++|++|++++|++++..|..++.+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 578999999999776 33 4799999999999999999988899999999999999999999988899999999999999
Q ss_pred ccCCc-cCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNN-LSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|. ++ .+| .+..+++|++|++++|.+++ ++....++++..+.+.+|.
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC-
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCcc
Confidence 99998 65 666 79999999999999999985 4455667788888887775
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4e-17 Score=153.86 Aligned_cols=110 Identities=26% Similarity=0.287 Sum_probs=102.4
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
.|+.|+|++|+|++ +|. |++|++|+.|+|++|+++ .+|..|+.+++|++|+|++|++++ +| .++.+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58899999999995 776 999999999999999999 889999999999999999999995 77 89999999999999
Q ss_pred CCccCCCc-chhHhhcCCCcEEEeeCceeeccCCCC
Q 036266 83 SNNLSGKI-PKSLEALSNLKELNVSYNRLEGEIPTN 117 (312)
Q Consensus 83 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~~~~~~p~~ 117 (312)
+|+|++.. |..+..+++|+.|++++|++++.+|..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999876 999999999999999999999877653
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-17 Score=140.92 Aligned_cols=131 Identities=27% Similarity=0.211 Sum_probs=116.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|++.+..+..|.++++|++|+|++|++++..|..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 36999999999999877779999999999999999999888889999999999999999999888899999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeecc-CCC-CccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGE-IPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~-~p~-~~~~~~l~~l~~~~n~ 132 (312)
++|++++..+..+..+++|++|++++|.+++. +|. ...+.++..+.+.+|.
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999977776899999999999999999863 454 3456778888877765
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.3e-17 Score=155.97 Aligned_cols=131 Identities=19% Similarity=0.155 Sum_probs=116.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++++.|+|++|++++..|..|.++++|++|+|++|++.+..|.+|.++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999888999999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeec-cCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEG-EIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~-~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..+.++++|++|++++|.+++ .+|....+.++..+.+.+|.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 9999997668889999999999999999987 44665567777777776664
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-17 Score=155.43 Aligned_cols=137 Identities=21% Similarity=0.276 Sum_probs=123.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcC-CcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRL-YGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l-~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++++.++++.|.+.+..|..+..++.|+.|++++|++ .+.+|..|..+++|++|+|++|++++..|..|+++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 46789999999999999999999999999999999985 45688999999999999999999999999999999999999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCc-cC-CCccccccccccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV-PF-GNFSSQSFISNYALCAH 137 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~-~~-~~l~~l~~~~n~~l~~~ 137 (312)
+|++|+|++..|..|..+++|++|++++|++++.+|... .+ .++..+.+.+|+..|..
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 999999998888999999999999999999998888653 33 57888999999988753
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.1e-17 Score=154.09 Aligned_cols=129 Identities=29% Similarity=0.268 Sum_probs=69.4
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.|+|++|++++..|..|.++++|++|++++|++++..|..|.++++|++|+|++|++++..|.+|+++++|++|+|+
T Consensus 33 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (606)
T 3vq2_A 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAV 112 (606)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECT
T ss_pred CcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEcc
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeec-cCCC-CccCCCccccccccc
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEG-EIPT-NVPFGNFSSQSFISN 131 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~-~~p~-~~~~~~l~~l~~~~n 131 (312)
+|++++..|..+.++++|++|++++|.+++ .+|. ...+.++..+.+.+|
T Consensus 113 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 113 ETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp TSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred CCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 555554444555555555555555555543 2332 223344444444433
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.7e-17 Score=152.96 Aligned_cols=113 Identities=21% Similarity=0.191 Sum_probs=91.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|.+++..|..|+++++|+.|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46788888888888877777888888888888888888887777788888888888888888855555568888888888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
|++|.+++..|..|..+++|++|++++|.+++.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 888888877777888888888888888888754
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.9e-17 Score=162.48 Aligned_cols=130 Identities=20% Similarity=0.246 Sum_probs=77.2
Q ss_pred CCCCcEEeecCCcccc-----------------cCccccc--cCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCc
Q 036266 1 LEYILQINLFSNSLSG-----------------SLPSNIQ--NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR 61 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~ 61 (312)
|++|+.|+|++|+|+| .+|..++ +|++|+.|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 3556666666666665 2565555 66666666666666666666666666666666666665
Q ss_pred -CCC-CCCccccCCC-------CCCEEeccCCccCCCcch--hHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccc
Q 036266 62 -SQG-SIPKSFESLA-------SLEFLDLSSNNLSGKIPK--SLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFIS 130 (312)
Q Consensus 62 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~ 130 (312)
++| .+|..++.++ +|+.|+|++|+++ .+|. .+.++++|+.|++++|.++ .+|....+.++..+.+.+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~ 604 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDY 604 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCS
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcC
Confidence 555 5555444433 6666666666666 5555 6666666666666666666 555444445555555555
Q ss_pred cc
Q 036266 131 NY 132 (312)
Q Consensus 131 n~ 132 (312)
|.
T Consensus 605 N~ 606 (876)
T 4ecn_A 605 NQ 606 (876)
T ss_dssp SC
T ss_pred Cc
Confidence 43
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=3.9e-17 Score=129.78 Aligned_cols=113 Identities=26% Similarity=0.328 Sum_probs=100.3
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC-CccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI-PKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|.+++. ..+..+++|+.|++++|++.+.+|..+..+++|++|++++|++++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 47899999999999966 78999999999999999999888988888999999999999999542 2789999999999
Q ss_pred eccCCccCCCcc---hhHhhcCCCcEEEeeCceeeccCCC
Q 036266 80 DLSSNNLSGKIP---KSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 80 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
++++|.+++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999996555 58999999999999999987 4443
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-17 Score=163.86 Aligned_cols=128 Identities=22% Similarity=0.423 Sum_probs=116.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCc-CCc-CCCcCccCCC-------CCCEEeCCCCcCCCCCCc--c
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINR-LYG-DIPITISGLK-------DLTTLFLAGNRSQGSIPK--S 69 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~l~-------~L~~L~l~~n~l~~~~p~--~ 69 (312)
|++|+.|+|++|++.|.+|..|++|++|+.|+|++|+ ++| .+|..++.++ +|++|+|++|+++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 5789999999999999999999999999999999998 998 8888777665 9999999999999 8998 9
Q ss_pred ccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCC-cccccccccc
Q 036266 70 FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGN-FSSQSFISNY 132 (312)
Q Consensus 70 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~-l~~l~~~~n~ 132 (312)
++.+++|+.|+|++|+++ .+| .|..+++|+.|++++|.++ .+|. ...+.+ +..+.+..|.
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 999999999999999999 889 9999999999999999999 6664 345666 8888887776
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1e-16 Score=148.36 Aligned_cols=130 Identities=22% Similarity=0.162 Sum_probs=102.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|+.|+|++|.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46788888888888777788888888888888888888877888888888888888888888655566788888888888
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISN 131 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n 131 (312)
++|++++..|..|..+++|++|++++|.+++..|.. ..+.++..+.+.+|
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCC
Confidence 888888777788888888888888888887665532 34455555655554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=146.00 Aligned_cols=128 Identities=28% Similarity=0.273 Sum_probs=63.1
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+++.|+|++|++++..+..|.++++|+.|+|++|.+.+..|..|.++++|++|+|++|+++...+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 34455555555554444455555555555555555554444445555555555555555553333344555555555555
Q ss_pred CCccCCCcch-------------------------hHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 83 SNNLSGKIPK-------------------------SLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 83 ~N~l~~~~p~-------------------------~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
+|+++...+. .|.++++|++|++++|.++ .+|....+.++..+.+.+|
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N 217 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGN 217 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTS
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCC
Confidence 5544433333 3445555555555555554 3444444445555555544
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.5e-17 Score=152.20 Aligned_cols=137 Identities=28% Similarity=0.322 Sum_probs=114.8
Q ss_pred CCCCcEEeecCCcccccCc-cccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCC-CCCCccccCCCCCCE
Q 036266 1 LEYILQINLFSNSLSGSLP-SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ-GSIPKSFESLASLEF 78 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~-~~~p~~~~~l~~L~~ 78 (312)
+++|+.|++++|.+++..| ..+.++++|+.|++++|.+.+..|..+.++++|++|++++|+++ +.+|..+..+++|+.
T Consensus 395 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~ 474 (570)
T 2z63_A 395 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474 (570)
T ss_dssp CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCE
Confidence 4678888888888887666 46788888999999999888888888899999999999999987 578888999999999
Q ss_pred EeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccccc
Q 036266 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCAH 137 (312)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~~ 137 (312)
|+|++|++++..|.++..+++|++|++++|++++.+|.. ..+.++..+.+.+|+..|..
T Consensus 475 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred EECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCC
Confidence 999999999877889999999999999999998776653 45677888888888866643
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-17 Score=143.30 Aligned_cols=131 Identities=18% Similarity=0.156 Sum_probs=89.5
Q ss_pred CCCCcEEeecCCcccccCcccc--ccCCCCCEEeccCCcCCcCCCcCccCC-----CCCCEEeCCCCcCCCCCCccccCC
Q 036266 1 LEYILQINLFSNSLSGSLPSNI--QNLKVLIGLDLSINRLYGDIPITISGL-----KDLTTLFLAGNRSQGSIPKSFESL 73 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l 73 (312)
+++|++|+|++|++++.+|..+ ..+++|+.|++++|++++. |..+..+ ++|++|+|++|++++..|..|+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4577888888888887777765 7777888888888887765 6666666 777777777777776666777777
Q ss_pred CCCCEEeccCCccCCC--cchhH--hhcCCCcEEEeeCceeecc--CCCC--ccCCCcccccccccc
Q 036266 74 ASLEFLDLSSNNLSGK--IPKSL--EALSNLKELNVSYNRLEGE--IPTN--VPFGNFSSQSFISNY 132 (312)
Q Consensus 74 ~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~~~~~--~p~~--~~~~~l~~l~~~~n~ 132 (312)
++|++|+|++|++++. +|..+ ..+++|++|++++|++++. ++.. ..+.++..+.+.+|.
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 7777777777777654 34444 6677777777777777621 1111 123456666665554
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.8e-16 Score=142.92 Aligned_cols=110 Identities=22% Similarity=0.200 Sum_probs=58.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|.+++..|..|.++++|+.|++++|.+.+..|..|.++++|++|+|++|+++...+..|+.+++|++|++
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 45555555555555444445555555555555555555555555555555555555555555222223455555555555
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
++|++++..|..+..+++|++|++++|.++
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 555555444445555555555555555554
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.68 E-value=6.8e-17 Score=129.48 Aligned_cols=126 Identities=17% Similarity=0.109 Sum_probs=104.0
Q ss_pred CCCCcEEeecCCcccccCccccccCC-CCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLK-VLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|+++ .+|. +..+. +|+.|++++|.+++. ..+..+++|++|+|++|++++..|..++.+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 368999999999999 5565 55555 999999999999975 679999999999999999996545556999999999
Q ss_pred eccCCccCCCcch--hHhhcCCCcEEEeeCceeeccCCC-----CccCCCcccccccccc
Q 036266 80 DLSSNNLSGKIPK--SLEALSNLKELNVSYNRLEGEIPT-----NVPFGNFSSQSFISNY 132 (312)
Q Consensus 80 ~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~~~~~~p~-----~~~~~~l~~l~~~~n~ 132 (312)
+|++|+++ .+|. .+..+++|+.|++++|.++ .+|. ...++++..+++..|.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~ 151 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVK 151 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECC
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCC
Confidence 99999997 6776 8999999999999999998 4454 3455666666665543
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.68 E-value=6.7e-17 Score=149.51 Aligned_cols=113 Identities=25% Similarity=0.258 Sum_probs=86.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|++.+..+..|.++++|++|+|++|++++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46788888888888877788888888888888888888766666677888888888888888777777777777777777
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
|++|.+++..|..|.++++|+.|++++|.+++.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 777777766666777777777777777776643
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=6.9e-17 Score=151.90 Aligned_cols=131 Identities=18% Similarity=0.145 Sum_probs=109.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|++|++++|++.+..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 47899999999999888889999999999999999999888889999999999999999999777777999999999999
Q ss_pred cCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCC--CccCCCcccccccccc
Q 036266 82 SSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPT--NVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~--~~~~~~l~~l~~~~n~ 132 (312)
++|++++ ..|..+.++++|++|++++|.+.+.+|. ...+.++..+.+.+|.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 9999986 4677889999999999999985555552 3445566666665554
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=8e-17 Score=153.27 Aligned_cols=133 Identities=22% Similarity=0.211 Sum_probs=71.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc---CCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG---DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEF 78 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~---~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 78 (312)
++|+.|+|++|.+++..|..+..+++|+.|++++|.+.+ ..+..+..+++|++|++++|++++..|..|+.+++|+.
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 504 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNH 504 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCE
Confidence 445555555555554455555555555555555555544 12234555555555555555555555555555555666
Q ss_pred EeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccccccc
Q 036266 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALC 135 (312)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~ 135 (312)
|+|++|++++..|..+..+++| .|++++|++++.+|.. ..+.++..+.+.+|+..|
T Consensus 505 L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 505 VDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp EECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred EECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 6666666555555555555555 5566666555444432 234455566666666555
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-16 Score=145.68 Aligned_cols=106 Identities=23% Similarity=0.187 Sum_probs=80.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|+.|+|++|++.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46788888888888777778888888888888888888777778888888888888888888666666778888888888
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeC
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSY 107 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~ 107 (312)
++|+++...+..|.++++|+.|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~ 180 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGE 180 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCC
Confidence 88887754455566666666666655
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-17 Score=158.65 Aligned_cols=111 Identities=27% Similarity=0.343 Sum_probs=93.2
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|.+. .+|..+.+|++|+.|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|+.|++|++|+
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 467888888888888 77777888888888888888888 78888888888888888888888 7788888888888888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
|++|.|+ .+|..|..|++|+.|+|++|.+++.+|
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 8888887 678788888888888888888876554
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=157.76 Aligned_cols=113 Identities=23% Similarity=0.169 Sum_probs=69.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCC-CcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|++++..|..|.++++|+.|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 45666666666666666666666666666666666444443 55566666666666666666655566666666666666
Q ss_pred ccCCccCCCcchh--HhhcCCCcEEEeeCceeeccC
Q 036266 81 LSSNNLSGKIPKS--LEALSNLKELNVSYNRLEGEI 114 (312)
Q Consensus 81 l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~~~~~~ 114 (312)
|++|.+++.+|.. +.++++|++|++++|.+++..
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccc
Confidence 6666666544443 556666666666666665443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.67 E-value=7.4e-17 Score=135.62 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=101.4
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCc-CCcCCCcCccCCCCCCEEeCCC-CcCCCCCCccccCCCCCCEE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINR-LYGDIPITISGLKDLTTLFLAG-NRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L 79 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|+ +.+..+..|.++++|++|++++ |++++..|..|..+++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 368888999999887777788888899999999886 7766667888888999999988 88886666788888889999
Q ss_pred eccCCccCCCcchhHhhcCCCc---EEEeeCc-eeeccCCC-CccCCCcc-cccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLK---ELNVSYN-RLEGEIPT-NVPFGNFS-SQSFISNY 132 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~~~~~~p~-~~~~~~l~-~l~~~~n~ 132 (312)
++++|++++ +|. +..+++|+ +|++++| .+++..+. ...+.++. .+.+.+|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 998888885 665 77778887 8888888 88755544 23455666 66666654
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.67 E-value=2e-16 Score=145.41 Aligned_cols=131 Identities=24% Similarity=0.221 Sum_probs=114.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|+++...+..|..+++|+.|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 57899999999999988889999999999999999999988888899999999999999999977777899999999999
Q ss_pred ccCCccCCCcc-hhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIP-KSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|+..+.+| ..|..+++|++|++++|+++ .+|....+.++..+.+.+|.
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~ 229 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMPNLTPLVGLEELEMSGNH 229 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCS-SCCCCTTCTTCCEEECTTSC
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCccc-ccccccccccccEEECcCCc
Confidence 99954433454 57899999999999999998 45777777888888887775
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-17 Score=145.46 Aligned_cols=131 Identities=17% Similarity=0.084 Sum_probs=96.3
Q ss_pred CCCCcEEeecCCcccccCccccccC-----CCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCC--CCccc--c
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNL-----KVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS--IPKSF--E 71 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~--~p~~~--~ 71 (312)
+++|+.|+|++|++++. |..++.+ ++|++|++++|++.+..|..|+.+++|++|+|++|++.+. .|..+ +
T Consensus 120 l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTT
T ss_pred CCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhc
Confidence 46788888888888866 7777776 7888888888888877778888888888888888887654 34444 7
Q ss_pred CCCCCCEEeccCCccCC--Ccc-hhHhhcCCCcEEEeeCceeeccCCC--CccCCCcccccccccc
Q 036266 72 SLASLEFLDLSSNNLSG--KIP-KSLEALSNLKELNVSYNRLEGEIPT--NVPFGNFSSQSFISNY 132 (312)
Q Consensus 72 ~l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~~~~~~p~--~~~~~~l~~l~~~~n~ 132 (312)
.+++|++|+|++|++++ .+| ..+..+++|++|++++|++++.+|. ...+.++..+.+.+|.
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 264 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTG 264 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSC
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCc
Confidence 78888888888888873 222 3345678888888888888876642 2345677777776665
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.66 E-value=5.9e-17 Score=126.09 Aligned_cols=105 Identities=24% Similarity=0.295 Sum_probs=94.8
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCC-CCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS-IPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|++++. ..+.++++|+.|++++|.+++.+|..+..+++|++|++++|++++. .|..++.+++|++|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 57899999999999966 7899999999999999999988998888899999999999999963 34889999999999
Q ss_pred eccCCccCCCcc---hhHhhcCCCcEEEeeC
Q 036266 80 DLSSNNLSGKIP---KSLEALSNLKELNVSY 107 (312)
Q Consensus 80 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 107 (312)
++++|.+++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999997665 5899999999999863
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.3e-16 Score=147.47 Aligned_cols=133 Identities=26% Similarity=0.325 Sum_probs=81.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc--CCCcCccCCCCCCEEeCCCCcCCCCCCcc-ccCC----
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG--DIPITISGLKDLTTLFLAGNRSQGSIPKS-FESL---- 73 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l---- 73 (312)
+++|+.|+|++|++++.+|..++.+++|+.|++++|++.+ .+|..+..+++|++|++++|++++.+|.. +..+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3566667777777666666666666666666666666664 34455666666666666666666534432 3333
Q ss_pred ------------------CCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC--CccCCCccccccccccc
Q 036266 74 ------------------ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT--NVPFGNFSSQSFISNYA 133 (312)
Q Consensus 74 ------------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~--~~~~~~l~~l~~~~n~~ 133 (312)
++|+.|+|++|+++ .+|..+..+++|++|++++|+++ .+|. ...+.++..+.+.+|+.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCB
T ss_pred EEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCC
Confidence 45666666666666 56666667777777777777776 3443 23455666666666665
Q ss_pred cc
Q 036266 134 LC 135 (312)
Q Consensus 134 l~ 135 (312)
.|
T Consensus 481 ~c 482 (520)
T 2z7x_B 481 DC 482 (520)
T ss_dssp CC
T ss_pred cc
Confidence 44
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-16 Score=139.58 Aligned_cols=133 Identities=19% Similarity=0.050 Sum_probs=106.0
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCcc-CCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITIS-GLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|++++..|..+..+++|+.|++++|.+.+..|..+. .+++|++|+|++|++++. |. ...+++|++|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEE
Confidence 46788888888888877777888889999999999999887777664 788999999999998854 33 3458899999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~ 136 (312)
+|++|++++ +|..+..+++|+.|++++|+++...+....+.++..+.+.+|...|.
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 999999984 56668899999999999999985444445667888888888876544
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-16 Score=142.37 Aligned_cols=130 Identities=21% Similarity=0.151 Sum_probs=102.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..+..|.++++|+.|++++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47889999999998766668899999999999999998888888999999999999999998554555888999999999
Q ss_pred cCCccCCCcch--hHhhcCCCcEEEeeCce-eeccCCC-CccCCCcccccccccc
Q 036266 82 SSNNLSGKIPK--SLEALSNLKELNVSYNR-LEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
++|++++ +|. .+..+++|++|++++|+ ++...|. ...+.++..+.+.+|.
T Consensus 132 ~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 132 LGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp TTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 9999884 554 78888899999998884 5544443 2345566666665554
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=151.59 Aligned_cols=130 Identities=25% Similarity=0.208 Sum_probs=85.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|++|++++|.+.+..|..|.++++|++|+|++|++++..+.+|+.+++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 35677777777777666666777777777777777777666666777777777777777776444445777777777777
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISN 131 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n 131 (312)
++|++++..|..|.++++|++|++++|.+++..|.. ..+.++..+.+.+|
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 777776555566777777777777777776655542 23444444444443
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-16 Score=134.32 Aligned_cols=128 Identities=16% Similarity=0.147 Sum_probs=97.7
Q ss_pred CCCCcEEeecCCc-ccccCccccccCCCCCEEeccC-CcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCC-
Q 036266 1 LEYILQINLFSNS-LSGSLPSNIQNLKVLIGLDLSI-NRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLE- 77 (312)
Q Consensus 1 l~~L~~l~l~~n~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~- 77 (312)
+++|+.|+|++|+ +++..+..|.++++|+.|++++ |++++..|..|.++++|++|++++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4678888888886 7766666788888888888887 88887777788888888888888888885 666 77888887
Q ss_pred --EEeccCC-ccCCCcchhHhhcCCCc-EEEeeCceeeccCCC-CccCCCccccccccc
Q 036266 78 --FLDLSSN-NLSGKIPKSLEALSNLK-ELNVSYNRLEGEIPT-NVPFGNFSSQSFISN 131 (312)
Q Consensus 78 --~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n 131 (312)
.|++++| ++++..+..|..+++|+ .|++++|.++ .+|. .....++..+.+.+|
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n 189 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKN 189 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTC
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCC
Confidence 8888888 88866666788888888 8888888887 4443 223345666666666
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.3e-16 Score=148.93 Aligned_cols=132 Identities=16% Similarity=0.123 Sum_probs=117.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++++.|++++|.+.+..+..|.++++|+.|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|+.+++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 46789999999999976666789999999999999999998889999999999999999999988888899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
|++|.+++..|..|.++++|++|++++|.+++.+|. ...+.++..+.+.+|.
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCC
Confidence 999999966666679999999999999999988775 3456777777776664
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=152.68 Aligned_cols=131 Identities=27% Similarity=0.230 Sum_probs=107.3
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..|..|+++++|+.|+|++|++++..+..|.++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 48 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 48 YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 46789999999999988888899999999999999999866666789999999999999999877778899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCc---cCCCccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV---PFGNFSSQSFISN 131 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~---~~~~l~~l~~~~n 131 (312)
|++|.+++..|..+.++++|++|++++|.+++..|... ...++..+.+.+|
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n 181 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCC
Confidence 99999988888888889999999999998886655421 2245555655554
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.1e-16 Score=140.53 Aligned_cols=132 Identities=16% Similarity=0.123 Sum_probs=115.0
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++++.|++++|.++...+..|.++++|+.|++++|.+.+..|..|..+++|++|+|++|++++..|..|+.+++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 47899999999999955555579999999999999999988888999999999999999999988888999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
|++|+++...+..|.++++|++|++++|.+++..|. ...+.++..+.+.+|.
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 176 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 176 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCc
Confidence 999999954445578999999999999999977665 3456777777777665
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.2e-16 Score=146.54 Aligned_cols=126 Identities=27% Similarity=0.188 Sum_probs=103.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57899999999999877788999999999999999999888889999999999999999998 67766 7899999999
Q ss_pred cCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCCCccCCCc--ccccccccc
Q 036266 82 SSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF--SSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l--~~l~~~~n~ 132 (312)
++|++++ .+|..|.++++|++|++++|.+++. ....+..+ ..+.+.+|.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeeccc
Confidence 9999986 4568899999999999999988752 22233444 555555553
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-16 Score=148.09 Aligned_cols=126 Identities=26% Similarity=0.216 Sum_probs=106.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|++|++++|++++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 57899999999999888889999999999999999999888999999999999999999998 67776 8999999999
Q ss_pred cCCccCC-CcchhHhhcCCCcEEEeeCceeeccCCCCccCCCc--ccccccccc
Q 036266 82 SSNNLSG-KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF--SSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l--~~l~~~~n~ 132 (312)
++|++++ .+|..|.++++|++|++++|.+++. ....+..+ ..+.+.+|.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~l~~n~ 149 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS--SVLPIAHLNISKVLLVLGE 149 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--GGGGGTTSCEEEEEEEECT
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh--hccccccceeeEEEeeccc
Confidence 9999987 5789999999999999999998752 12233444 555555543
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.3e-16 Score=147.10 Aligned_cols=134 Identities=24% Similarity=0.214 Sum_probs=85.3
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcC--CCcCccCCCCCCEEeCCCCcCCCCCCcc-ccCCCC--
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGD--IPITISGLKDLTTLFLAGNRSQGSIPKS-FESLAS-- 75 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~-- 75 (312)
+++|+.|+|++|++++.+|..+.++++|+.|++++|++++. +|..+.++++|++|++++|++++.+|.. +..+++
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 36788888888888877787888888888888888888752 3466777788888888888877645543 555544
Q ss_pred --------------------CCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccc
Q 036266 76 --------------------LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYAL 134 (312)
Q Consensus 76 --------------------L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l 134 (312)
|+.|+|++|+++ .+|..+..+++|++|++++|+++...+. ...+.++..+.+.+|+..
T Consensus 432 ~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp EEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred EEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 555555555554 4455455566666666666666632222 234455555666666544
Q ss_pred c
Q 036266 135 C 135 (312)
Q Consensus 135 ~ 135 (312)
|
T Consensus 511 c 511 (562)
T 3a79_B 511 C 511 (562)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-16 Score=140.17 Aligned_cols=131 Identities=14% Similarity=0.032 Sum_probs=84.6
Q ss_pred CCCCcEEeecCCcccccCc----cccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCC--C--CccccC
Q 036266 1 LEYILQINLFSNSLSGSLP----SNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGS--I--PKSFES 72 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~--~--p~~~~~ 72 (312)
+++|+.|+|++|++++..| ..+..+++|+.|++++|++.+..|..|..+++|++|+|++|++.+. + +..++.
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3567777777777776554 3345677777777777777777777777777777777777776542 2 222356
Q ss_pred CCCCCEEeccCCccCCCcch----hHhhcCCCcEEEeeCceeeccCCCC-ccC---CCcccccccccc
Q 036266 73 LASLEFLDLSSNNLSGKIPK----SLEALSNLKELNVSYNRLEGEIPTN-VPF---GNFSSQSFISNY 132 (312)
Q Consensus 73 l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~~~~~~p~~-~~~---~~l~~l~~~~n~ 132 (312)
+++|++|+|++|+++ .+|. .+..+++|++|++++|.+++..|.. ..+ .++..+.+.+|.
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~ 262 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAG 262 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCC
Confidence 777777777777776 3333 2456677777777777777664432 222 466666665554
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.7e-16 Score=149.25 Aligned_cols=117 Identities=23% Similarity=0.205 Sum_probs=106.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCC-CCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQG-SIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L 79 (312)
+++|++|+|++|++++..|..|.++++|++|++++|++++..|..|+++++|++|+|++|++++ ..|..++.+++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 5789999999999999888999999999999999999998888889999999999999999986 467889999999999
Q ss_pred eccCCccCCCcc-hhHhhcCCCcEEEeeCceeeccCCCC
Q 036266 80 DLSSNNLSGKIP-KSLEALSNLKELNVSYNRLEGEIPTN 117 (312)
Q Consensus 80 ~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~~~~~~p~~ 117 (312)
++++|++.+.+| ..+.++++|++|++++|.+++.+|..
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 999999555665 68999999999999999999877754
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=7.7e-16 Score=135.63 Aligned_cols=128 Identities=25% Similarity=0.298 Sum_probs=88.9
Q ss_pred CCCCcEEeecCCcccc--cCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCE
Q 036266 1 LEYILQINLFSNSLSG--SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEF 78 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 78 (312)
+++|+.|+|++|.++. ..|..+.++++|+.|++++|.+. .+|..+. ++|++|++++|++++..|..|..+++|+.
T Consensus 144 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 4678888888888853 66777888888888888888777 3554443 67777777777777666777777777777
Q ss_pred EeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 79 LDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 79 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
|+|++|++++..|..+..+++|++|++++|.++ .+|. ...+.++..+.+.+|.
T Consensus 221 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp EECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSC
T ss_pred EECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCc
Confidence 777777777666666777777777777777776 4443 3345556666665554
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.8e-16 Score=142.41 Aligned_cols=126 Identities=21% Similarity=0.153 Sum_probs=107.7
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
....++.++++|+ .+|..+. ++++.|+|++|++.+..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3567899999999 7887776 589999999999999999999999999999999999998888999999999999999
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCccccccccc
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISN 131 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n 131 (312)
+|+++...+..|..+++|++|++++|.++...+. ...+.++..+.+.++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~ 170 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC
Confidence 9999976677899999999999999999865553 234555665655543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.7e-16 Score=138.99 Aligned_cols=111 Identities=25% Similarity=0.261 Sum_probs=50.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc--cccCCCCCCEE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L 79 (312)
++|+.|+|++|++++..|..|.++++|++|++++|++++..+..|.++++|++|++++|++++ +|. .+..+++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEE
Confidence 344444444444444444444444444444444444443333334444444444444444442 222 34444444444
Q ss_pred eccCC-ccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 80 DLSSN-NLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 80 ~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
++++| .+++..|..+.++++|++|++++|.+++.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 44444 23333334444444444444444444443
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=5e-16 Score=153.38 Aligned_cols=116 Identities=28% Similarity=0.253 Sum_probs=100.0
Q ss_pred CCCCcEEeecCCcccccC-ccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCcc--ccCCCCCC
Q 036266 1 LEYILQINLFSNSLSGSL-PSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKS--FESLASLE 77 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~--~~~l~~L~ 77 (312)
|++|+.|+|++|.+.+.+ |..|.+|++|++|+|++|.+.+..|..|.++++|++|+|++|.+++.+|.. |+.+++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 578999999999776666 778999999999999999999888999999999999999999998877765 88999999
Q ss_pred EEeccCCccCCCcc-hhHhhcCCCcEEEeeCceeeccCCC
Q 036266 78 FLDLSSNNLSGKIP-KSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 78 ~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
+|||++|++++..| ..|.++++|++|++++|.+++..|.
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~ 166 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSG
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHH
Confidence 99999999987654 6789999999999999988876554
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-16 Score=147.41 Aligned_cols=117 Identities=21% Similarity=0.289 Sum_probs=110.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCC-cCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLY-GDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++|+.|+|++|.+++..|..+.++++|+.|++++|.+. +.+|..+..+++|++|++++|++++..|..|+.+++|++|
T Consensus 420 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 499 (570)
T 2z63_A 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 499 (570)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEE
Confidence 578999999999999999999999999999999999998 6799999999999999999999998889999999999999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~ 117 (312)
++++|++++..|..+..+++|+.|++++|.+++..|..
T Consensus 500 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 500 NMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp ECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred eCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999999888888999999999999999999887753
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-15 Score=128.97 Aligned_cols=123 Identities=24% Similarity=0.259 Sum_probs=60.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc-------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK------------- 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~------------- 68 (312)
++|+.|++++|+++ .+| .+..+++|+.|++++|++++..| +..+++|++|+|++|++++ +|.
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPSACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCCSSCCEEECCS
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccccCcccEEEccC
Confidence 44555555555555 334 45555555555555555553322 5555555555555555553 222
Q ss_pred -------cccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 69 -------SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 69 -------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
.+..+++|+.|+|++|++++ +| .+..+++|+.|++++|++++. +....+.++..+.+.+|.
T Consensus 116 N~l~~~~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 116 NELRDTDSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp SCCSBSGGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEE
T ss_pred CccCCChhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCc
Confidence 34455555555555555553 22 345555555555555555533 333334444444444443
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-15 Score=133.91 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=102.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++..|..|.++++|+.|++++|++++..|..|.++++|++|++++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 47889999999998777788999999999999999999888888999999999999999988 6676665 78999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeec--cCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEG--EIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~--~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++..+..+..+++|+.|++++|.++. ..|......++..+.+.+|.
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~ 183 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSB
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCC
Confidence 9999987666778889999999999998863 44433222255566655554
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.8e-16 Score=145.83 Aligned_cols=112 Identities=21% Similarity=0.178 Sum_probs=72.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc-------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK------------- 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~------------- 68 (312)
++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++..+.
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l 111 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcC
Confidence 478999999999998888889999999999999999887665 77777777777776665532110
Q ss_pred ---cccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 69 ---SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 69 ---~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
....+++|+.|+|++|.+++..|..+..+++|++|++++|.+++.+|
T Consensus 112 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (487)
T 3oja_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (487)
T ss_dssp CCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEG
T ss_pred CCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcCh
Confidence 00123444555555555554444455555555555555555554433
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=133.34 Aligned_cols=128 Identities=21% Similarity=0.272 Sum_probs=108.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCc--CCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG--DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
++|+.|++++|++++..+..|.++++|+.|++++|.+.. ..|..+.++++|++|++++|+++ .+|..+. ++|+.|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 578999999999997777788999999999999999853 77888999999999999999998 5676654 789999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
++++|++++..|..+..+++|+.|++++|.+++..+. ...+.++..+.+.+|.
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 9999999987788999999999999999999877663 3456778888887775
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-15 Score=131.38 Aligned_cols=123 Identities=26% Similarity=0.328 Sum_probs=74.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++..| +.++++|+.|++++|++.+ +| .+..+++|++|++++|++++ + +.+..+++|+.|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~ 140 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLY 140 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEE
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEE
Confidence 3566666666666664333 6666666666666666664 33 26666666666666666663 2 3466666666666
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|++++. ..+..+++|+.|++++|++++..| ...+.++..+.+.+|.
T Consensus 141 l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 141 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred ccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 666666643 456666666666666666665444 3445555555555553
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-16 Score=125.39 Aligned_cols=106 Identities=21% Similarity=0.218 Sum_probs=95.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc--cccCCCCCCEE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK--SFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L 79 (312)
++|+.|+|++|+|++. ..+..+++|+.|++++|++++..|..+..+++|++|+|++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999965 68999999999999999999765566699999999999999997 6776 89999999999
Q ss_pred eccCCccCCCcchh----HhhcCCCcEEEeeCceee
Q 036266 80 DLSSNNLSGKIPKS----LEALSNLKELNVSYNRLE 111 (312)
Q Consensus 80 ~l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~~~ 111 (312)
++++|.++ .+|.. +..+++|+.|+++.|.+.
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999998 56764 999999999999999875
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.62 E-value=2.1e-15 Score=132.94 Aligned_cols=130 Identities=21% Similarity=0.252 Sum_probs=74.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCC--cCCCcCccCC--------------------CCCCEEeCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLY--GDIPITISGL--------------------KDLTTLFLAG 59 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l--------------------~~L~~L~l~~ 59 (312)
++|++|++++|++++..+..|.++++|+.|++++|.+. +..|..+..+ ++|++|++++
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~ 202 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDH 202 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCC
Confidence 35666666666666544455666777777777777664 2445444443 3445555555
Q ss_pred CcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 60 n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
|++++..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|+++ .+|. ...+.++..+.+.+|.
T Consensus 203 n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 275 (332)
T 2ft3_A 203 NKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNN 275 (332)
T ss_dssp SCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCC
Confidence 5555444555666666666666666666555556666666666666666666 3333 2334455555555543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-15 Score=131.43 Aligned_cols=123 Identities=24% Similarity=0.346 Sum_probs=105.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++ +| .+..+++|+.|++++|++.+. ..+..+++|++|++++|++++. ..++.+++|+.|+
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 5789999999999985 44 499999999999999999863 4688999999999999999854 6789999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|++++..| +..+++|+.|++++|.+++ +|....+.++..+.+.+|.
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQE 211 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCc
Confidence 99999996554 8999999999999999985 4555667788888887775
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=131.76 Aligned_cols=123 Identities=24% Similarity=0.394 Sum_probs=84.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++ +| .+..+++|+.|++++|++.+ +|. +..+++|++|++++|++++. |. ++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~ 157 (308)
T 1h6u_A 84 LTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLS 157 (308)
T ss_dssp CCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEE
T ss_pred CCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEE
Confidence 4677888888888774 34 57778888888888888775 333 77777777777777777743 33 77777777777
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|++++ +|. +..+++|+.|++++|.+++..+ ...+.++..+.+.+|.
T Consensus 158 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 158 IGNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred ccCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 77777774 333 6777777777777777764333 3445556666665554
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=6e-16 Score=135.23 Aligned_cols=131 Identities=16% Similarity=0.092 Sum_probs=82.2
Q ss_pred CCCcEEeecCCcccccCcccc--ccCCCCCEEeccCCcCCcCCC----cCccCCCCCCEEeCCCCcCCCCCCccccCCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNI--QNLKVLIGLDLSINRLYGDIP----ITISGLKDLTTLFLAGNRSQGSIPKSFESLAS 75 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 75 (312)
++|++|+|++|++++..|..+ ..+++|++|++++|.+.+..| ..+..+++|++|+|++|++++..|..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 456777777777777777666 677777777777777766544 33345677777777777777666667777777
Q ss_pred CCEEeccCCccCCC--cc--hhHhhcCCCcEEEeeCceeeccCCC----CccCCCcccccccccc
Q 036266 76 LEFLDLSSNNLSGK--IP--KSLEALSNLKELNVSYNRLEGEIPT----NVPFGNFSSQSFISNY 132 (312)
Q Consensus 76 L~~L~l~~N~l~~~--~p--~~~~~l~~L~~L~l~~N~~~~~~p~----~~~~~~l~~l~~~~n~ 132 (312)
|++|||++|++.+. +| ..+..+++|++|++++|+++...+. ...+.++..+++.+|.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~ 235 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNS 235 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCC
Confidence 77777777776542 22 2235666777777777777521110 1233566666666554
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-15 Score=135.56 Aligned_cols=104 Identities=26% Similarity=0.242 Sum_probs=93.6
Q ss_pred EEeecCC-cccccCccccccCCCCCEEeccC-CcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccC
Q 036266 6 QINLFSN-SLSGSLPSNIQNLKVLIGLDLSI-NRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83 (312)
Q Consensus 6 ~l~l~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~ 83 (312)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|.+..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5788998 898 6888 99999999999996 999988889999999999999999999999999999999999999999
Q ss_pred CccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 84 NNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 84 N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
|+|++..|..+..+. |+.|++.+|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999976666666655 9999999999874
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.8e-15 Score=132.77 Aligned_cols=124 Identities=21% Similarity=0.299 Sum_probs=75.4
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++. |. +..+++|+.|++++|.+.+ + +.+..+++|++|++++|++++. +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 4566666666666633 32 6666666666666666654 2 3466666666666666666632 34666666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++..|..+..+++|++|++++|++++..| ...+.++..+++.+|.
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 6666666666666666666667776666665544 3445555555555543
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=4.2e-15 Score=129.78 Aligned_cols=122 Identities=23% Similarity=0.375 Sum_probs=69.1
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|++++. |. +..+++|+.|++++|++.+ +| .+..+++|++|++++|++++ +|. +..+++|+.|++
T Consensus 63 ~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 4566666666666533 32 6666666666666666653 23 45566666666666666653 332 566666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++..| +..+++|++|++++|.+++..+ ...+.++..+.+.+|.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 6666664322 5666666666666666654332 3344555555555443
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.60 E-value=3.7e-15 Score=127.12 Aligned_cols=121 Identities=18% Similarity=0.212 Sum_probs=94.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.+++.+++++|.++ .++ .+..+++|+.|++++|.+. .+| .+..+++|++|+|++|++++. |. +..+++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEEC
Confidence 35677889999998 445 6899999999999999998 566 789999999999999999954 44 999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|++++ +|... . ++|++|++++|++++ +|....+.++..+.+.+|.
T Consensus 93 ~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 93 NRNRLKN-LNGIP-S-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNK 139 (263)
T ss_dssp CSSCCSC-CTTCC-C-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSC
T ss_pred CCCccCC-cCccc-c-CcccEEEccCCccCC-ChhhcCcccccEEECCCCc
Confidence 9999985 44322 2 777888888887774 3444455566666665554
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.60 E-value=5e-15 Score=118.36 Aligned_cols=90 Identities=22% Similarity=0.164 Sum_probs=82.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 57999999999999888999999999999999999999877777899999999999999999666667999999999999
Q ss_pred cCCccCCCcch
Q 036266 82 SSNNLSGKIPK 92 (312)
Q Consensus 82 ~~N~l~~~~p~ 92 (312)
++|.+.. .|.
T Consensus 113 ~~N~~~c-~~~ 122 (174)
T 2r9u_A 113 YNNPWDC-ECR 122 (174)
T ss_dssp CSSCBCT-TBG
T ss_pred CCCCccc-ccc
Confidence 9999984 444
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.59 E-value=5.4e-15 Score=117.69 Aligned_cols=89 Identities=25% Similarity=0.230 Sum_probs=82.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 57999999999999888999999999999999999999888888999999999999999999777778999999999999
Q ss_pred cCCccCCCc
Q 036266 82 SSNNLSGKI 90 (312)
Q Consensus 82 ~~N~l~~~~ 90 (312)
++|.++...
T Consensus 110 ~~N~~~c~c 118 (170)
T 3g39_A 110 LNNPWDCAC 118 (170)
T ss_dssp CSSCBCTTB
T ss_pred CCCCCCCCc
Confidence 999998543
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-15 Score=146.99 Aligned_cols=125 Identities=25% Similarity=0.292 Sum_probs=95.9
Q ss_pred CcEEeecCCcccc---------cCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCC
Q 036266 4 ILQINLFSNSLSG---------SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLA 74 (312)
Q Consensus 4 L~~l~l~~n~l~~---------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 74 (312)
|+.++|++|+|.+ ..|..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|+++ .+|..|+.|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3445555555443 45788999999999999999998 78888889999999999999999 8999999999
Q ss_pred CCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 75 SLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 75 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
+|++|+|++|+|+ .+|..|.+|++|++|+|++|.++ .+|. ...+.++..+.+.+|.
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 9999999999999 88999999999999999999998 5564 4566778888887775
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.5e-16 Score=135.89 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=91.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCc-------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPK------------- 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~------------- 68 (312)
++|+.|+|++|++++..|..|.++++|+.|++++|++++..| +..+++|++|++++|++++..+.
T Consensus 34 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l 111 (317)
T 3o53_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNI 111 (317)
T ss_dssp GGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCC
T ss_pred CCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCcc
Confidence 578999999999998878889999999999999999986655 88888888888888877642110
Q ss_pred ---cccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCc--cCCCcccccccccc
Q 036266 69 ---SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNV--PFGNFSSQSFISNY 132 (312)
Q Consensus 69 ---~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~--~~~~l~~l~~~~n~ 132 (312)
....+++|++|++++|++++..|..+..+++|++|++++|.+++..|... .+.++..+.+.+|.
T Consensus 112 ~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 180 (317)
T 3o53_A 112 SRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (317)
T ss_dssp SEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred CCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCc
Confidence 01224556677777777776556677777777777777777776544332 34556666665554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.59 E-value=6e-15 Score=139.94 Aligned_cols=123 Identities=25% Similarity=0.355 Sum_probs=63.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCC---------------------cCccCCCCCCEEeCCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP---------------------ITISGLKDLTTLFLAGN 60 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p---------------------~~~~~l~~L~~L~l~~n 60 (312)
++|+.|+|++|+|++..| +..|++|+.|+|++|.+.+ +| +.+..+++|+.|+|++|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNN 141 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSS
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCCCCccccCCCccCEEECCCC
Confidence 455555555555553332 4555555555555555542 22 12444445555555555
Q ss_pred cCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 61 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++++. ..++.+++|+.|+|++|++++..| +..+++|+.|+|++|.+++ +|....+.++..+.+.+|.
T Consensus 142 ~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 142 KITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEECCSEE
T ss_pred ccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-ChHHccCCCCCEEEccCCc
Confidence 55432 345555555555555555554433 5555666666666666653 2433445556666665554
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.6e-15 Score=140.14 Aligned_cols=105 Identities=28% Similarity=0.351 Sum_probs=93.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
|++|+.|+|++|.|++ +| .+..|++|+.|+|++|.+++. ..+..+++|+.|+|++|++++..| +..+++|+.|+
T Consensus 108 l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 108 LKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp CTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 5788999999999885 44 589999999999999999965 579999999999999999997666 99999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
|++|+|++ +| .+..+++|+.|+|++|++++.
T Consensus 182 Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 182 LSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCSSCCCB-CG-GGTTCTTCSEEECCSEEEECC
T ss_pred CcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCC
Confidence 99999996 44 689999999999999999864
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.6e-15 Score=138.31 Aligned_cols=102 Identities=27% Similarity=0.335 Sum_probs=92.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC-CccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI-PKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L 79 (312)
|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|++++ +| .++.+++|++|+|++|++++.. |..++.+++|+.|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L 538 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 538 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEE
Confidence 578999999999999 889999999999999999999996 77 8999999999999999999876 9999999999999
Q ss_pred eccCCccCCCcch---hHhhcCCCcEEEe
Q 036266 80 DLSSNNLSGKIPK---SLEALSNLKELNV 105 (312)
Q Consensus 80 ~l~~N~l~~~~p~---~~~~l~~L~~L~l 105 (312)
+|++|.+++.+|. .+..+++|+.|++
T Consensus 539 ~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 539 NLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred EecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999976552 3455889999864
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6.2e-17 Score=132.24 Aligned_cols=127 Identities=24% Similarity=0.282 Sum_probs=106.6
Q ss_pred CCCcEEeecCCcccccCcc------ccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCC
Q 036266 2 EYILQINLFSNSLSGSLPS------NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLAS 75 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~ 75 (312)
+.++.++++.|.++|.+|. .+..+++|+.|++++|.+.+ +| .+..+++|++|++++|+++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 5678888899999988887 89999999999999999986 77 8899999999999999998 78888888899
Q ss_pred CCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC--CCccCCCccccccccccc
Q 036266 76 LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP--TNVPFGNFSSQSFISNYA 133 (312)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p--~~~~~~~l~~l~~~~n~~ 133 (312)
|+.|+|++|++++ +| .+..+++|++|++++|++++..+ ....+.++..+.+.+|..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcc
Confidence 9999999999995 56 68899999999999999985322 234566777788777763
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.54 E-value=4.9e-17 Score=132.83 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=99.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++ +| .+.++++|+.|++++|.+. .+|..+..+++|++|++++|++++ +| .+..+++|+.|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 5789999999999996 77 8999999999999999998 688888888999999999999995 56 688999999999
Q ss_pred ccCCccCCCcc-hhHhhcCCCcEEEeeCceeeccCCC
Q 036266 81 LSSNNLSGKIP-KSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 81 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
+++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999995332 5899999999999999999887765
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-14 Score=132.76 Aligned_cols=122 Identities=28% Similarity=0.379 Sum_probs=65.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.+++..| +..+++|+.|++++|.+.+..| +..+++|++|++++|++++..| ++.+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 315 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLT 315 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEE
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEE
Confidence 3556666666666664433 5666666666666666664333 5556666666666666654322 55555566666
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
|++|++++..| +..+++|+.|++++|.+++. +....+.++..+.+.+|
T Consensus 316 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 316 LYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN 363 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS
T ss_pred CcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC
Confidence 66665554433 44555555555555555432 22233334444444333
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-14 Score=131.44 Aligned_cols=123 Identities=28% Similarity=0.418 Sum_probs=84.3
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|++++ ++ .+..+++|+.|++++|.+.+..| +..+++|++|++++|++++..| +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 4567777777777774 33 56777777777777777775544 6777777777777777774433 67777777777
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|++++..| +..+++|+.|++++|++++..| ...+.++..+.+.+|.
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCc
Confidence 77777775433 6677777777777777776555 3455666666666553
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=99.49 E-value=4e-14 Score=125.30 Aligned_cols=105 Identities=22% Similarity=0.331 Sum_probs=93.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.+++ + +.+..+++|+.|++++|++.+. +.+..+++|++|++++|++++..|..++.+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 5789999999999995 4 4699999999999999999864 4589999999999999999988899999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+++|++++..| +..+++|+.|++++|.++
T Consensus 318 L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999997666 889999999999999986
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.2e-13 Score=126.97 Aligned_cols=118 Identities=19% Similarity=0.187 Sum_probs=93.2
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|++++. | .++.+++|+.|++++|++++. | ++.+++|++|++++|++++. | ++.+++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 46889999999999864 6 688999999999999999864 4 88889999999999998864 4 88889999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
+++|++++ +| +..+++|++|++++|++++. | ...+.++..+.+..|
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~-l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D-VSHNTQLTELDCHLN 158 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C-CTTCTTCCEEECTTC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c-cccCCcCCEEECCCC
Confidence 99999986 55 78888899999999988863 3 334445555555444
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.49 E-value=5e-14 Score=132.40 Aligned_cols=113 Identities=23% Similarity=0.256 Sum_probs=68.2
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.|+|++|+|++ +|. .+++|+.|++++|++++ +|. .+++|++|+|++|++++ +|. |. ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 45566666666664 444 45666777777777664 454 45677777777777764 555 54 677777777
Q ss_pred CCccCCCcchhHhhcCCC-------cEEEeeCceeeccCCC-CccCCCcccccccccc
Q 036266 83 SNNLSGKIPKSLEALSNL-------KELNVSYNRLEGEIPT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L-------~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~ 132 (312)
+|+|+ .+|. +.. +| +.|++++|+|+. +|. ...+.++..+.+.+|.
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~ 241 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNP 241 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSS
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCc
Confidence 77776 5555 443 55 777777777763 443 3345556666665554
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.1e-13 Score=127.23 Aligned_cols=104 Identities=25% Similarity=0.242 Sum_probs=82.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|+..+.+ .+..+++|+.|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|+
T Consensus 147 l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~ 218 (457)
T 3bz5_A 147 NTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLD 218 (457)
T ss_dssp CTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEE
T ss_pred CCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEE
Confidence 467888888888666666 37788888888888888886 55 77888888888888888854 378888888888
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
+++|++++ +| +..+++|+.|++++|++++..+
T Consensus 219 Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 219 CSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred CcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 88888886 56 7788888888888888886543
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-13 Score=129.80 Aligned_cols=113 Identities=28% Similarity=0.299 Sum_probs=86.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+|++ +|. +.+ +|+.|+|++|++++ +|. .+++|++|+|++|++++ +|. .+++|+.|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4678889999999886 776 665 88999999999886 665 67889999999999885 666 578899999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCc-------ccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNF-------SSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l-------~~l~~~~n~ 132 (312)
|++|+|++ +|. |. ++|+.|++++|.|+ .+|.. . .++ ..+.+.+|.
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~~-~-~~L~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPAV-P-VRNHHSEETEIFFRCRENR 218 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCCC-C---------CCEEEECCSSC
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhhH-H-HhhhcccccceEEecCCCc
Confidence 99999986 676 55 88999999999988 56652 1 255 666666664
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.6e-13 Score=123.06 Aligned_cols=117 Identities=22% Similarity=0.276 Sum_probs=62.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|++|+|++|++++ +| +|+++++|+.|++++|++++ +|..+ ++|++|++++|++++ +| .++.+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 356666666666664 55 46666667777776666664 44332 356666666666654 44 4566666666666
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
++|++++ +|... ++|++|++++|.++ .+|....+.++..+.+.+|
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N 247 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNN 247 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCC
Confidence 6665553 33211 24444444444444 3333333334444444333
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.3e-15 Score=130.98 Aligned_cols=129 Identities=18% Similarity=0.175 Sum_probs=94.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcC-CCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGD-IPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++++.|++++|.+.+..|. +..+++|+.|++++|.+.+. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5678888888888866554 56788888888888887755 777778888888888888888777777788888888888
Q ss_pred ccCC-ccCC-CcchhHhhcCCCcEEEeeCc-eeecc-CCC-CccCC-Cccccccccc
Q 036266 81 LSSN-NLSG-KIPKSLEALSNLKELNVSYN-RLEGE-IPT-NVPFG-NFSSQSFISN 131 (312)
Q Consensus 81 l~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~~~~~-~p~-~~~~~-~l~~l~~~~n 131 (312)
|++| .+++ .+|..+..+++|++|++++| .+++. ++. ...++ ++..+.+.+|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 8888 5765 36777778888888888888 77642 222 22345 6666666555
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-14 Score=130.78 Aligned_cols=131 Identities=20% Similarity=0.229 Sum_probs=104.2
Q ss_pred CCCcEEeecCCccc-ccCc---cccccCCCCCEEeccCCcCC--c---CCCcCccCCCCCCEEeCCCCcCC----CCCCc
Q 036266 2 EYILQINLFSNSLS-GSLP---SNIQNLKVLIGLDLSINRLY--G---DIPITISGLKDLTTLFLAGNRSQ----GSIPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~n~l~----~~~p~ 68 (312)
++|+.|+|++|+++ +.+| ..+..+++|+.|++++|++. | ..|..+..+++|++|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 68889999999987 4555 46778889999999999887 3 45557888999999999999985 56788
Q ss_pred cccCCCCCCEEeccCCccCCC----cchhHhh--cCCCcEEEeeCceeec----cCCCCc--cCCCcccccccccc
Q 036266 69 SFESLASLEFLDLSSNNLSGK----IPKSLEA--LSNLKELNVSYNRLEG----EIPTNV--PFGNFSSQSFISNY 132 (312)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~--l~~L~~L~l~~N~~~~----~~p~~~--~~~~l~~l~~~~n~ 132 (312)
.+..+++|+.|+|++|.+++. +|..+.. +++|++|++++|.+++ .+|... .++++..+.+.+|.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 888999999999999999865 5667744 8899999999999987 355432 35778888877775
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=120.39 Aligned_cols=106 Identities=22% Similarity=0.271 Sum_probs=91.4
Q ss_pred CEEeccCC-cCCcCCCcCccCCCCCCEEeCCC-CcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEee
Q 036266 29 IGLDLSIN-RLYGDIPITISGLKDLTTLFLAG-NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS 106 (312)
Q Consensus 29 ~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 106 (312)
..++.+++ +++ .+|. +..+++|++|+|++ |++++..|..|+.|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789988 888 5888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred CceeeccCCCCccCCCcccccccccccccc
Q 036266 107 YNRLEGEIPTNVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 107 ~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~ 136 (312)
+|+|++.+|.......+..+.+.+|...|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999997666554444478888888876553
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-13 Score=122.43 Aligned_cols=110 Identities=15% Similarity=0.123 Sum_probs=82.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCC-cCccCCCCCCE-EeCCCCcCCCCCCccccCCCCCCEE
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP-ITISGLKDLTT-LFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~-L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++++|+|++|+|+...+..|.+|++|+.|+|++|++.+.+| ..|.+++++++ +.++.|+++...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 468888899998885555678888889999998888866555 46778888765 5666788887777888888888888
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeC-ceee
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSY-NRLE 111 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~~~ 111 (312)
++++|+++...+..+....++..|++.+ |.+.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~ 142 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH 142 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC
T ss_pred cccccccccCCchhhcccchhhhhhhccccccc
Confidence 8888888866665666666666777654 3444
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-14 Score=128.44 Aligned_cols=132 Identities=20% Similarity=0.198 Sum_probs=100.4
Q ss_pred CCCCcEEeecCCccccc-CccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCC-cCCCC-CCccccCCCCCC
Q 036266 1 LEYILQINLFSNSLSGS-LPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN-RSQGS-IPKSFESLASLE 77 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~ 77 (312)
+++|+.|+|++|.+++. +|..+..+++|+.|++++|.+.+..|..++.+++|++|++++| .+++. +|..+..+++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 46788899998888866 7878888888999999888888778888888888888888888 56652 666677888888
Q ss_pred EEeccCC-ccCCC-cchhHhhcC-CCcEEEeeCc--eee-ccCCCC-ccCCCcccccccccc
Q 036266 78 FLDLSSN-NLSGK-IPKSLEALS-NLKELNVSYN--RLE-GEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 78 ~L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~~~-~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
+|++++| .+++. +|..+..++ +|++|++++| .++ +.+|.. ..++++..+.+.+|.
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 8888888 88754 677788888 8888888888 343 223321 245566666666654
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.3e-14 Score=128.98 Aligned_cols=115 Identities=20% Similarity=0.244 Sum_probs=100.4
Q ss_pred CCCCcEEeecCCccc--c---cCccccccCCCCCEEeccCCcCC----cCCCcCccCCCCCCEEeCCCCcCCCC----CC
Q 036266 1 LEYILQINLFSNSLS--G---SLPSNIQNLKVLIGLDLSINRLY----GDIPITISGLKDLTTLFLAGNRSQGS----IP 67 (312)
Q Consensus 1 l~~L~~l~l~~n~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~n~l~~~----~p 67 (312)
+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 468999999999998 3 45558999999999999999996 67888999999999999999999865 56
Q ss_pred ccc--cCCCCCCEEeccCCccCC----CcchhH-hhcCCCcEEEeeCceeeccCC
Q 036266 68 KSF--ESLASLEFLDLSSNNLSG----KIPKSL-EALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 68 ~~~--~~l~~L~~L~l~~N~l~~----~~p~~~-~~l~~L~~L~l~~N~~~~~~p 115 (312)
..+ +.+++|+.|+|++|.+++ .+|..+ .++++|++|++++|.+++..|
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 777 449999999999999997 488888 668999999999999986553
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=111.39 Aligned_cols=138 Identities=15% Similarity=0.052 Sum_probs=105.7
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~ 229 (312)
....|......+.++.+.||++.. .++.+++|+...........+.+|+++++.+. +..+.++++++.. ....+++
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~lv 88 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH--DGWSNLL 88 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE--TTEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec--CCceEEE
Confidence 334677777778888899999875 36789999987532223345888999998885 6677788887763 3456888
Q ss_pred ecccCCCCHHHH-------HHHHHHHHHHHHHHhCC--------------------------------------------
Q 036266 230 SCVMPNGDFPER-------LNIMIDMALAFEYLHHG-------------------------------------------- 258 (312)
Q Consensus 230 ~~~~~~g~~~~~-------~~i~~~i~~~l~ylH~~-------------------------------------------- 258 (312)
||++++.++.+. ..++.+++++++.||..
T Consensus 89 ~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 89 MSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp EECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred EEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 999999887663 36899999999999951
Q ss_pred ------------CCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 259 ------------RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 259 ------------~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
....++|+|++|.||+++++..+.|+||+.+..
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998755
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.39 E-value=7e-14 Score=124.73 Aligned_cols=110 Identities=22% Similarity=0.211 Sum_probs=76.7
Q ss_pred CCcEEeecCCcccccCc----cccccCC-CCCEEeccCCcCCcCCCcCccCC-----CCCCEEeCCCCcCCCCCCcccc-
Q 036266 3 YILQINLFSNSLSGSLP----SNIQNLK-VLIGLDLSINRLYGDIPITISGL-----KDLTTLFLAGNRSQGSIPKSFE- 71 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~- 71 (312)
+|+.|+|++|++++..+ ..+.+++ +|+.|+|++|.+.+..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 47778888888776655 5667777 78888888887777666666664 7778888888877766555433
Q ss_pred ---CC-CCCCEEeccCCccCCCcchhHhh-----cCCCcEEEeeCceeec
Q 036266 72 ---SL-ASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNVSYNRLEG 112 (312)
Q Consensus 72 ---~l-~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~~~~ 112 (312)
.+ ++|++|+|++|++++..+..+.. .++|++|++++|.++.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 33 67777777777777665555443 2577777777777763
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.4e-12 Score=123.97 Aligned_cols=74 Identities=27% Similarity=0.376 Sum_probs=37.9
Q ss_pred CCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccc
Q 036266 50 KDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSF 128 (312)
Q Consensus 50 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~ 128 (312)
++|++|+|++|++++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|++++|+++ .+|. ...+.++..+.+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 455556666665553 44 23455566666666655 3443 4455566666666655 3332 233444444555
Q ss_pred cccc
Q 036266 129 ISNY 132 (312)
Q Consensus 129 ~~n~ 132 (312)
.+|+
T Consensus 292 ~~N~ 295 (622)
T 3g06_A 292 EGNP 295 (622)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 4443
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.36 E-value=3.5e-12 Score=117.16 Aligned_cols=95 Identities=25% Similarity=0.296 Sum_probs=55.8
Q ss_pred CCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEe
Q 036266 26 KVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNV 105 (312)
Q Consensus 26 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 105 (312)
++|++|++++|++.+ +| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .+.++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 356666666666664 55 46666666666666666663 45432 366666666666664 45 4666777777777
Q ss_pred eCceeeccCCCCccCCCccccccccc
Q 036266 106 SYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 106 ~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
++|.+++ +|.. ..++..+.+.+|
T Consensus 203 ~~N~l~~-l~~~--~~~L~~L~l~~n 225 (454)
T 1jl5_A 203 DNNSLKK-LPDL--PLSLESIVAGNN 225 (454)
T ss_dssp CSSCCSS-CCCC--CTTCCEEECCSS
T ss_pred CCCcCCc-CCCC--cCcccEEECcCC
Confidence 7777664 3332 134555555544
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.5e-12 Score=121.21 Aligned_cols=52 Identities=38% Similarity=0.391 Sum_probs=35.3
Q ss_pred CCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 74 ASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 74 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|+.|+|++|+|++ +| ..+++|+.|++++|.++ .+|. .+.++..+.+.+|.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~--~~~~L~~L~Ls~N~ 272 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM--LPSGLLSLSVYRNQ 272 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC--CCTTCCEEECCSSC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc--ccccCcEEeCCCCC
Confidence 567777777777774 55 34567788888888877 4554 45566666666654
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.35 E-value=1.7e-12 Score=109.96 Aligned_cols=133 Identities=13% Similarity=0.031 Sum_probs=95.6
Q ss_pred ccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc--eeeeeeeeeecccccEEEEec
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN--LIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~l~~~ 231 (312)
.+......+.|..+.||++...+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++... ....+++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~--~~~~~~v~e 95 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTE--AGRDWLLLG 95 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC--SSCEEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccC--CCCCEEEEE
Confidence 34433332355568999998766778999997643 2245778999988886544 4457776553 234688899
Q ss_pred ccCCCCHH----HHHHHHHHHHHHHHHHhCCC------------------------------------------------
Q 036266 232 VMPNGDFP----ERLNIMIDMALAFEYLHHGR------------------------------------------------ 259 (312)
Q Consensus 232 ~~~~g~~~----~~~~i~~~i~~~l~ylH~~~------------------------------------------------ 259 (312)
|+++.++. +...++.++++.+..+|...
T Consensus 96 ~i~G~~l~~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 96 EVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp CCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred ecCCcccCcCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 99987663 12368899999999999421
Q ss_pred -------CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 -------STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 -------~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|++|.||++++++.++++||+.|..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998876678999998765
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-13 Score=122.05 Aligned_cols=127 Identities=21% Similarity=0.207 Sum_probs=105.6
Q ss_pred EEeecCCcccccCccccccCCCCCEEeccCCcCCcCCC----cCccCCC-CCCEEeCCCCcCCCCCCccccCC-----CC
Q 036266 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP----ITISGLK-DLTTLFLAGNRSQGSIPKSFESL-----AS 75 (312)
Q Consensus 6 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l-----~~ 75 (312)
.+.|+.|+++|.+|..+...++|+.|+|++|.+.+..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999877777889999999999997776 7788898 99999999999998888888775 99
Q ss_pred CCEEeccCCccCCCcchhHhhc-----CCCcEEEeeCceeeccCCCCc-----c-CCCcccccccccc
Q 036266 76 LEFLDLSSNNLSGKIPKSLEAL-----SNLKELNVSYNRLEGEIPTNV-----P-FGNFSSQSFISNY 132 (312)
Q Consensus 76 L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~l~~N~~~~~~p~~~-----~-~~~l~~l~~~~n~ 132 (312)
|++|+|++|++++..+..+... ++|++|++++|.+++..+... . ..++..+.+.+|.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 9999999999998888766665 899999999999986544211 1 1367777776664
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-12 Score=114.35 Aligned_cols=108 Identities=21% Similarity=0.214 Sum_probs=93.2
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCC-ccccCCCCCCE-Eecc
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP-KSFESLASLEF-LDLS 82 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~-L~l~ 82 (312)
+.++-++|+|+ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.+++++.. ++++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56888999999 8888773 589999999999997667789999999999999999876665 56899998875 6777
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
+|+++...|..|..+++|++|++++|.++...+
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred CCcccccCchhhhhccccccccccccccccCCc
Confidence 899997778899999999999999999985544
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.23 E-value=2.6e-13 Score=124.67 Aligned_cols=132 Identities=20% Similarity=0.114 Sum_probs=89.2
Q ss_pred CCCCcEEeecCCcccccC-----ccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCCCCCCcccc
Q 036266 1 LEYILQINLFSNSLSGSL-----PSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQGSIPKSFE 71 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 71 (312)
+++|+.|+|++|.+++.- +..+..+++|+.|++++|.++.. +|..+..+++|++|++++|.+++..+..+.
T Consensus 226 ~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 226 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHH
Confidence 467888888888887542 22233578888888888888754 566677788888888888887654333333
Q ss_pred C-----CCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeeccCCCCc------cCCCcccccccccc
Q 036266 72 S-----LASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGEIPTNV------PFGNFSSQSFISNY 132 (312)
Q Consensus 72 ~-----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~~~p~~~------~~~~l~~l~~~~n~ 132 (312)
. .++|+.|++++|.+++. +|..+..+++|++|++++|.+++..+... ...++..+.+.+|.
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 2 25788888888888765 56677777888888888887765432210 13456666665553
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.21 E-value=7.1e-13 Score=121.71 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=103.1
Q ss_pred CCCCcEEeecCCccccc----CccccccCCCCCEEeccCCcCCcCCCcCccC-----CCCCCEEeCCCCcCCCC----CC
Q 036266 1 LEYILQINLFSNSLSGS----LPSNIQNLKVLIGLDLSINRLYGDIPITISG-----LKDLTTLFLAGNRSQGS----IP 67 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~n~l~~~----~p 67 (312)
+++|+.|+|++|++++. +|..+..+++|+.|++++|.+.+..+..+.. .++|++|++++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 36899999999999964 6778888999999999999987554434433 26899999999998865 56
Q ss_pred ccccCCCCCCEEeccCCccCCCcchhHhh-----cCCCcEEEeeCceeec----cCCCC-ccCCCcccccccccc
Q 036266 68 KSFESLASLEFLDLSSNNLSGKIPKSLEA-----LSNLKELNVSYNRLEG----EIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 68 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~~~~----~~p~~-~~~~~l~~l~~~~n~ 132 (312)
..+..+++|++|+|++|.+++..+..+.. .++|++|++++|.+++ .+|.. ....++..+++.+|.
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 67778899999999999998766666654 6789999999999885 44432 235677777777764
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.3e-10 Score=101.76 Aligned_cols=134 Identities=13% Similarity=0.092 Sum_probs=96.3
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEee--hhh-hHhHHHHHHHHHHhhcCC--CCceeeeeeeeeeccc-ccEEEEe
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFN--LQL-ERAFRSFDSKCEVHKNVR--HRNLIKILTTIAILIL-KPWYLSS 230 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~-~~~~l~~ 230 (312)
..+.++.|.++.+|+.... +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++..... ...+++|
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567889999999998764 4678889876 332 122346788999998887 4457777777654321 3367888
Q ss_pred cccCCCC----------HHHHHHHHHHHHHHHHHHhCCC-----------------------------------------
Q 036266 231 CVMPNGD----------FPERLNIMIDMALAFEYLHHGR----------------------------------------- 259 (312)
Q Consensus 231 ~~~~~g~----------~~~~~~i~~~i~~~l~ylH~~~----------------------------------------- 259 (312)
|++++.. ..++..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 8998763 3456778999999999999520
Q ss_pred --------------CCCceecCCCCCCeeeCCCCc--eEEccccchhh
Q 036266 260 --------------STPMVHCDLKPSNNLLDEDMV--AHVSDFNISKL 291 (312)
Q Consensus 260 --------------~~~iiHrDlkp~Nill~~~~~--~kl~DFG~a~~ 291 (312)
...++|+|++|.||+++.++. +.|+||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997653 68999998865
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=7.3e-12 Score=111.97 Aligned_cols=131 Identities=20% Similarity=0.183 Sum_probs=90.2
Q ss_pred CCCcEEeecCCcccccCcccc-ccCCCCCEEeccCCcCCcCCCcCc-----cCCCCCCEEeCCCCcCCC----CCCcccc
Q 036266 2 EYILQINLFSNSLSGSLPSNI-QNLKVLIGLDLSINRLYGDIPITI-----SGLKDLTTLFLAGNRSQG----SIPKSFE 71 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~l~~n~l~~----~~p~~~~ 71 (312)
++|+.|+|++|.|+..-...+ ..+++|+.|+|++|.+...-...+ ...++|++|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478899999998875433333 456788899999998875433333 245788999999998864 2445557
Q ss_pred CCCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeeccCC----C-CccCCCcccccccccc
Q 036266 72 SLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGEIP----T-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~~~p----~-~~~~~~l~~l~~~~n~ 132 (312)
.+++|++|||++|.|+.. ++..+...++|+.|++++|.++..-. . .....++..+++.+|.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSS
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCC
Confidence 788899999999988742 35566777889999999998864211 1 0123566777776664
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.9e-10 Score=99.83 Aligned_cols=63 Identities=10% Similarity=0.060 Sum_probs=51.8
Q ss_pred CCCCcEEeecCCccc--------------------ccCcccccc--------CCCCCEEeccCCcCCcCCCcCccCCCCC
Q 036266 1 LEYILQINLFSNSLS--------------------GSLPSNIQN--------LKVLIGLDLSINRLYGDIPITISGLKDL 52 (312)
Q Consensus 1 l~~L~~l~l~~n~l~--------------------~~~p~~~~~--------l~~L~~L~l~~N~l~~~~p~~~~~l~~L 52 (312)
+++|+.|||++|++. ...+..|.+ +++|+.|+|++ ++...-+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 578999999999988 223346777 99999999999 8887778889999999
Q ss_pred CEEeCCCCcCCC
Q 036266 53 TTLFLAGNRSQG 64 (312)
Q Consensus 53 ~~L~l~~n~l~~ 64 (312)
+.+++++|.+..
T Consensus 127 ~~l~l~~n~i~~ 138 (329)
T 3sb4_A 127 KICQIRKKTAPN 138 (329)
T ss_dssp CEEEBCCSSCCE
T ss_pred ceEEcCCCCccc
Confidence 999999998653
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.9e-10 Score=99.89 Aligned_cols=101 Identities=13% Similarity=0.056 Sum_probs=50.0
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCC-EEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLT-TLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++|+.|+|++|+++...+..|.++++|+.|+|++| +...-+.+|.++++|+ .+++.+ +++..-+.+|.+|++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 34555555555555333344555555555555554 4444444455555555 555544 34433344555555555555
Q ss_pred ccCCccCCCcchhHhhcCCCcEEE
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELN 104 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~ 104 (312)
+++|+++...+.+|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 555555533334455555555443
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=99.00 E-value=9.5e-11 Score=99.27 Aligned_cols=95 Identities=28% Similarity=0.406 Sum_probs=63.3
Q ss_pred EeecCCcccccCcc----ccccCCCCCEEeccCCcCCc--CCCcCccCCCCCCEEeCCCCcCCCCCCccccCCC--CCCE
Q 036266 7 INLFSNSLSGSLPS----NIQNLKVLIGLDLSINRLYG--DIPITISGLKDLTTLFLAGNRSQGSIPKSFESLA--SLEF 78 (312)
Q Consensus 7 l~l~~n~l~~~~p~----~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~ 78 (312)
++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 455666332 2232 22567788888888888876 4456666788888888888888754 3344444 7888
Q ss_pred EeccCCccCCCcc-------hhHhhcCCCcEEE
Q 036266 79 LDLSSNNLSGKIP-------KSLEALSNLKELN 104 (312)
Q Consensus 79 L~l~~N~l~~~~p-------~~~~~l~~L~~L~ 104 (312)
|+|++|.+++.+| ..+..+++|+.||
T Consensus 225 L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 225 LWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 8888888876555 2466777777765
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.2e-11 Score=107.01 Aligned_cols=131 Identities=16% Similarity=0.068 Sum_probs=91.5
Q ss_pred CCCcEEeecCCcccccCccccccC-----CCCCEEeccCCcCCcCCCcC-ccCCCCCCEEeCCCCcCCCCCCccc-----
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNL-----KVLIGLDLSINRLYGDIPIT-ISGLKDLTTLFLAGNRSQGSIPKSF----- 70 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~----- 70 (312)
++|+.|+|++|.|+......+..+ ++|+.|+|++|.+...-... ...+++|++|+|++|+++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 578999999999986555554433 68999999999886432222 3346789999999999875433433
Q ss_pred cCCCCCCEEeccCCccCC----CcchhHhhcCCCcEEEeeCceeeccC----CC-CccCCCcccccccccc
Q 036266 71 ESLASLEFLDLSSNNLSG----KIPKSLEALSNLKELNVSYNRLEGEI----PT-NVPFGNFSSQSFISNY 132 (312)
Q Consensus 71 ~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~~~~~~----p~-~~~~~~l~~l~~~~n~ 132 (312)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.++..- +. .....++..+.+.+|.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCC
Confidence 346789999999999864 24556677889999999999886421 11 1123456677766654
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-10 Score=92.42 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=82.6
Q ss_pred CCCcEEeecCC-ccccc----CccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFSN-SLSGS----LPSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
++|+.|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+... +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 57889999998 87643 344566778899999999988642 344455567899999999988743 456
Q ss_pred cccCCCCCCEEec--cCCccCCC----cchhHhhcCCCcEEEeeCceee
Q 036266 69 SFESLASLEFLDL--SSNNLSGK----IPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 69 ~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
.+...++|++|+| ++|.++.. +...+...++|++|++++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6777788999999 78988753 3445566688999999988875
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.90 E-value=9.6e-10 Score=93.10 Aligned_cols=78 Identities=29% Similarity=0.330 Sum_probs=66.6
Q ss_pred CCCCcEEeecCCcccc--cCccccccCCCCCEEeccCCcCCcCCCcCccCCC--CCCEEeCCCCcCCCCCCc-------c
Q 036266 1 LEYILQINLFSNSLSG--SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLK--DLTTLFLAGNRSQGSIPK-------S 69 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~n~l~~~~p~-------~ 69 (312)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|.+. ..+..+. +|++|+|++|.+.+.+|. .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 5799999999999998 5667888999999999999999965 3355555 999999999999987773 3
Q ss_pred ccCCCCCCEEe
Q 036266 70 FESLASLEFLD 80 (312)
Q Consensus 70 ~~~l~~L~~L~ 80 (312)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 67889999887
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.3e-10 Score=108.22 Aligned_cols=132 Identities=11% Similarity=0.062 Sum_probs=92.2
Q ss_pred CCCCcEEeecCCcccccCcccccc-CCCCCEEecc----CCcCCcC-----CCcCccCCCCCCEEeCCCCc--CCCCCCc
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQN-LKVLIGLDLS----INRLYGD-----IPITISGLKDLTTLFLAGNR--SQGSIPK 68 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~-----~p~~~~~l~~L~~L~l~~n~--l~~~~p~ 68 (312)
+++|+.|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|++|+++.|. +++..+.
T Consensus 377 ~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~ 456 (592)
T 3ogk_B 377 CQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLS 456 (592)
T ss_dssp CTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHH
T ss_pred CccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHH
Confidence 478889999888888877777765 8888998886 6777753 33336668888888887433 5544444
Q ss_pred ccc-CCCCCCEEeccCCccCC-CcchhHhhcCCCcEEEeeCceeecc-CCCC-ccCCCcccccccccc
Q 036266 69 SFE-SLASLEFLDLSSNNLSG-KIPKSLEALSNLKELNVSYNRLEGE-IPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 69 ~~~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~~~~~-~p~~-~~~~~l~~l~~~~n~ 132 (312)
.+. .+++|++|+|++|++++ .+|..+..+++|+.|++++|.+++. ++.. ..++++..+.+.+|.
T Consensus 457 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 457 YIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 443 37788888888888875 3556667788888888888887643 2221 245667777777665
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=98.78 E-value=2.8e-09 Score=100.76 Aligned_cols=110 Identities=17% Similarity=0.173 Sum_probs=64.1
Q ss_pred CCCCcEEeecCCccccc----CccccccCCCCCEEeccCCcCC----cCCCcCccCCCCCCEEeCCCCcCCCCCCccccC
Q 036266 1 LEYILQINLFSNSLSGS----LPSNIQNLKVLIGLDLSINRLY----GDIPITISGLKDLTTLFLAGNRSQGSIPKSFES 72 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 72 (312)
+++|+.|+|++|.+++. ++..+.++++|+.|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+..
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 35677777777776654 3334456667777777777665 2334444556677777777766543 3333333
Q ss_pred ---------------------------CCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 73 ---------------------------LASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 73 ---------------------------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
+++|+.|+++++. .+.+|..+..+++|++|++++|.+++
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~ 307 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLET 307 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCH
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCH
Confidence 3334444443332 23566666777777777777777653
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.4e-09 Score=101.24 Aligned_cols=131 Identities=14% Similarity=0.104 Sum_probs=97.1
Q ss_pred CCCCcEEeecCCcccccCccccc-cCCCCCEEecc--C----CcCCcC-----CCcCccCCCCCCEEeCCCCcCCCCCCc
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQ-NLKVLIGLDLS--I----NRLYGD-----IPITISGLKDLTTLFLAGNRSQGSIPK 68 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~--~----N~l~~~-----~p~~~~~l~~L~~L~l~~n~l~~~~p~ 68 (312)
+++|+.|+++.|++++..+..+. .+++|+.|+++ + |.++.. ++..+..+++|++|+|++ .+++..+.
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~ 449 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFE 449 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHH
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHH
Confidence 47899999999999987776665 68999999999 4 555521 122256788999999987 66655555
Q ss_pred cccC-CCCCCEEeccCCccCCCcchhH-hhcCCCcEEEeeCceeeccCCC--CccCCCcccccccccc
Q 036266 69 SFES-LASLEFLDLSSNNLSGKIPKSL-EALSNLKELNVSYNRLEGEIPT--NVPFGNFSSQSFISNY 132 (312)
Q Consensus 69 ~~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~~~~~~p~--~~~~~~l~~l~~~~n~ 132 (312)
.++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ...+.++..+.+.++.
T Consensus 450 ~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 450 YIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 5655 8899999999999987655555 6789999999999998643321 1235677777776664
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=98.59 E-value=1.7e-08 Score=95.39 Aligned_cols=108 Identities=19% Similarity=0.159 Sum_probs=70.9
Q ss_pred CCCCcEEeecCCcccccCccccc-cCCCCCEEeccCC-cCCcC-CCcCccCCCCCCEEeCCCCcCCCCCCcccc----CC
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQ-NLKVLIGLDLSIN-RLYGD-IPITISGLKDLTTLFLAGNRSQGSIPKSFE----SL 73 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~-~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~----~l 73 (312)
+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .+... ++..+..+++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 35778888888887776666665 6778888888877 44321 444445678888888888887765444333 56
Q ss_pred CCCCEEeccCCc--cCC-CcchhHhhcCCCcEEEeeCc
Q 036266 74 ASLEFLDLSSNN--LSG-KIPKSLEALSNLKELNVSYN 108 (312)
Q Consensus 74 ~~L~~L~l~~N~--l~~-~~p~~~~~l~~L~~L~l~~N 108 (312)
++|+.|++++|. ++. .++..+..+++|++|++++|
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 678888888776 221 12222344577888887776
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.58 E-value=2.2e-07 Score=80.45 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=88.1
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCc--eeeeeeeeeecc-cccEEEEeccc
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRN--LIKILTTIAILI-LKPWYLSSCVM 233 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~-~~~~~l~~~~~ 233 (312)
.+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++....... ....+++|+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568899999998763 45889986543 33466888999998874 332 233333322111 12346778899
Q ss_pred CCCCH----------HHHHHHHHHHHHHHHHHhCC---------------------------------------------
Q 036266 234 PNGDF----------PERLNIMIDMALAFEYLHHG--------------------------------------------- 258 (312)
Q Consensus 234 ~~g~~----------~~~~~i~~~i~~~l~ylH~~--------------------------------------------- 258 (312)
++.++ .++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 87643 23457889999999988841
Q ss_pred ----------CCCCceecCCCCCCeeeCC--CCceEEccccchhh
Q 036266 259 ----------RSTPMVHCDLKPSNNLLDE--DMVAHVSDFNISKL 291 (312)
Q Consensus 259 ----------~~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~ 291 (312)
....++|+|++|.||++++ ...+.++||+.+..
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 0135799999999999997 55688999998754
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-08 Score=90.68 Aligned_cols=128 Identities=14% Similarity=0.154 Sum_probs=84.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCcc--CCCCCCEEeCCC--CcCCCC-----CCccc-
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITIS--GLKDLTTLFLAG--NRSQGS-----IPKSF- 70 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~--n~l~~~-----~p~~~- 70 (312)
+|+|+.|+|++|.-. .+|. +. +++|+.|+|..+.+....-..+. .+++|+.|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 478999999988311 3343 43 78999999998877643323333 688999998853 322221 11122
Q ss_pred -cCCCCCCEEeccCCccCCCcchhHh---hcCCCcEEEeeCceeecc----CCCC-ccCCCccccccccc
Q 036266 71 -ESLASLEFLDLSSNNLSGKIPKSLE---ALSNLKELNVSYNRLEGE----IPTN-VPFGNFSSQSFISN 131 (312)
Q Consensus 71 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~~~~~----~p~~-~~~~~l~~l~~~~n 131 (312)
..+++|+.|+|++|.++...+..+. .+++|++|+|+.|.+++. ++.. ..+.++..+.+..|
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 2478999999999988765555555 477899999999988763 3322 24556777766555
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=7.3e-07 Score=77.28 Aligned_cols=128 Identities=10% Similarity=0.048 Sum_probs=88.2
Q ss_pred cceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCC---ceeeeeeeeeecccccEEEEeccc
Q 036266 157 EWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHR---NLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
..+.++.|....||+. ++.+++|+-.. ......+.+|.++++.+.+. .+.+++.+... .....+++|+++
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~-~~g~~~~v~e~i 95 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR-SDGNPFVGYRKV 95 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-TTSCEEEEEECC
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-CCCceEEEEecc
Confidence 3456788888899987 56688888543 23446788999999998753 24455554432 223356888899
Q ss_pred CCCCHHH----------HHHHHHHHHHHHHHHhCC---------------------------------------------
Q 036266 234 PNGDFPE----------RLNIMIDMALAFEYLHHG--------------------------------------------- 258 (312)
Q Consensus 234 ~~g~~~~----------~~~i~~~i~~~l~ylH~~--------------------------------------------- 258 (312)
++.++.. +..++.++++.++.||..
T Consensus 96 ~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 96 QGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred CCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 8875433 445677777777777732
Q ss_pred ------------CCCCceecCCCCCCeeeCC---CCc-eEEccccchhh
Q 036266 259 ------------RSTPMVHCDLKPSNNLLDE---DMV-AHVSDFNISKL 291 (312)
Q Consensus 259 ------------~~~~iiHrDlkp~Nill~~---~~~-~kl~DFG~a~~ 291 (312)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1234699999999999987 455 58999997654
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.1e-07 Score=84.33 Aligned_cols=129 Identities=12% Similarity=0.078 Sum_probs=83.3
Q ss_pred CCCCcEEeecCCccc---------ccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCcccc
Q 036266 1 LEYILQINLFSNSLS---------GSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFE 71 (312)
Q Consensus 1 l~~L~~l~l~~n~l~---------~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~ 71 (312)
+++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.+.......++
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 478999999776432 235556678899999999988422 2343 3 388999999998877643333343
Q ss_pred --CCCCCCEEeccC--CccCCC-----cchhH--hhcCCCcEEEeeCceeeccCC----CCccCCCcccccccccc
Q 036266 72 --SLASLEFLDLSS--NNLSGK-----IPKSL--EALSNLKELNVSYNRLEGEIP----TNVPFGNFSSQSFISNY 132 (312)
Q Consensus 72 --~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~~~~~~p----~~~~~~~l~~l~~~~n~ 132 (312)
.+++|+.|+|+. |...+. +...+ ..+++|++|++.+|.+....+ ....++++..+.+..|.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 689999999863 332221 11122 247899999999988864321 11235667777775553
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.34 E-value=1e-06 Score=79.30 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=49.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCC-----CCCCccccCCCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ-----GSIPKSFESLASL 76 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~-----~~~p~~~~~l~~L 76 (312)
++|+.++|..| ++..-..+|.+ .+|+.+.+. |.+...-+.+|.++++|+.+++.+|.+. ..-+.+|.+|++|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 45566666543 34233344444 455555552 3344344555555555555555554443 1233445555555
Q ss_pred CEEeccCCccCCCcchhHhhcCCCcEEEeeC
Q 036266 77 EFLDLSSNNLSGKIPKSLEALSNLKELNVSY 107 (312)
Q Consensus 77 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 107 (312)
+.++|.+ +++..-..+|.++++|+.+++..
T Consensus 303 ~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 303 ARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp CEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred CeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 5555552 34433334455555555555533
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=7.2e-06 Score=69.37 Aligned_cols=128 Identities=15% Similarity=0.096 Sum_probs=87.8
Q ss_pred eEeccCCcE-EEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEEecccCC
Q 036266 159 HLLGTESLG-SVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLSSCVMPN 235 (312)
Q Consensus 159 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~~~~~~~ 235 (312)
+.+..|..+ .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++... ...+++|+++++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--~~~~lvme~l~G 104 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--DDAWLLTTAIPG 104 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--TEEEEEEECCCS
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--CeEEEEEEeeCC
Confidence 345556555 68887754 4567999987643 3456778988887774 22355666666543 346788889998
Q ss_pred CCHHHH--------HHHHHHHHHHHHHHhCC-------------------------------------------------
Q 036266 236 GDFPER--------LNIMIDMALAFEYLHHG------------------------------------------------- 258 (312)
Q Consensus 236 g~~~~~--------~~i~~~i~~~l~ylH~~------------------------------------------------- 258 (312)
.++.+. ..+..+++..+.-||..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (272)
T 4gkh_A 105 KTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMH 184 (272)
T ss_dssp EEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHH
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHH
Confidence 755432 34667777777777721
Q ss_pred ------CCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 259 ------RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 259 ------~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 185 ~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 185 KLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999877778999998765
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.28 E-value=1.3e-07 Score=75.81 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=73.5
Q ss_pred ccccccCCCCCEEeccCC-cCCc----CCCcCccCCCCCCEEeCCCCcCCCC----CCccccCCCCCCEEeccCCccCCC
Q 036266 19 PSNIQNLKVLIGLDLSIN-RLYG----DIPITISGLKDLTTLFLAGNRSQGS----IPKSFESLASLEFLDLSSNNLSGK 89 (312)
Q Consensus 19 p~~~~~l~~L~~L~l~~N-~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 89 (312)
...+...+.|++|+|++| .+.. .+...+...++|++|+|++|.+... +...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344667889999999999 8763 2455566778999999999998742 344556678999999999999853
Q ss_pred ----cchhHhhcCCCcEEEe--eCceeec
Q 036266 90 ----IPKSLEALSNLKELNV--SYNRLEG 112 (312)
Q Consensus 90 ----~p~~~~~l~~L~~L~l--~~N~~~~ 112 (312)
+...+...++|++|++ ++|.+..
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 4566777789999999 8898863
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2.4e-06 Score=76.88 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=89.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCC-----cCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLY-----GDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASL 76 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 76 (312)
++|+.+.| .|+++..-+..|.++++|+.+++.+|.+. ...+.+|.++++|+.++|.+ .++..-..+|.+|++|
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSC
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCc
Confidence 36889999 56677566789999999999999998875 46778899999999999994 5775667889999999
Q ss_pred CEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 77 EFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 77 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
+.++|.+| ++..-+.+|.++ +|+.+++++|.+.
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 99999665 765567789999 9999999999776
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=6.6e-06 Score=72.62 Aligned_cols=134 Identities=13% Similarity=-0.007 Sum_probs=85.1
Q ss_pred ceEe-ccCCcEEEEEEEEc-------CCcEEEEEEeehhhh--H-hHHHHHHHHHHhhcCCC---Cceeeeeeeeeecc-
Q 036266 158 WHLL-GTESLGSVYKWIFL-------DETNVAIKVFNLQLE--R-AFRSFDSKCEVHKNVRH---RNLIKILTTIAILI- 222 (312)
Q Consensus 158 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~-~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~- 222 (312)
.+.+ +.|....+|+.... +++.+++|....... . ....+.+|+++++.+.. -.+.+++.+.....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 78888999988754 256788998754320 0 12456778888877742 24556666654321
Q ss_pred cccEEEEecccCCCCH------------------HHHHHHHHHHHHHHHHHhCC--------------------------
Q 036266 223 LKPWYLSSCVMPNGDF------------------PERLNIMIDMALAFEYLHHG-------------------------- 258 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~------------------~~~~~i~~~i~~~l~ylH~~-------------------------- 258 (312)
....+++|+++++..+ .++..++.++++.|+-||..
T Consensus 105 ~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNW 184 (357)
T ss_dssp TSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHH
T ss_pred cCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHH
Confidence 1234677888876432 22334455555555555421
Q ss_pred -----------------------------------CCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 259 -----------------------------------RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 259 -----------------------------------~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
....++|+|+.|.||+++++..+.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 185 VRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred HHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 034689999999999999655578999998765
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.11 E-value=1.4e-05 Score=68.30 Aligned_cols=54 Identities=13% Similarity=0.004 Sum_probs=42.0
Q ss_pred ccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC
Q 036266 154 EFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR 207 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~ 207 (312)
.....+.+|.|..+.||+....+|+.|.+|+...........+.+|.+.|+.+.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence 344567889999999999999999999999876543333456788998888774
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=1.6e-05 Score=71.26 Aligned_cols=75 Identities=7% Similarity=-0.054 Sum_probs=46.1
Q ss_pred ceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-------HhHHHHHHHHHHhhcCCC--Cc-eeeeeeeeeecccccE
Q 036266 158 WHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-------RAFRSFDSKCEVHKNVRH--RN-LIKILTTIAILILKPW 226 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~~~ 226 (312)
.+.+|.|.++.||++... +++.++||....... .....+..|.++++.+.. |. +.+++.+. ....
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d----~~~~ 110 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD----TEMA 110 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE----TTTT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc----CCcc
Confidence 467899999999999754 467899998653211 123446778888877642 33 33444432 2234
Q ss_pred EEEecccCCC
Q 036266 227 YLSSCVMPNG 236 (312)
Q Consensus 227 ~l~~~~~~~g 236 (312)
+++||++++.
T Consensus 111 ~lvmE~l~g~ 120 (397)
T 2olc_A 111 VTVMEDLSHL 120 (397)
T ss_dssp EEEECCCTTS
T ss_pred EEEEEeCCCc
Confidence 6788888763
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.96 E-value=1.5e-06 Score=68.41 Aligned_cols=84 Identities=18% Similarity=0.106 Sum_probs=57.8
Q ss_pred CCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCc-CCCCCCccccCC----CCCCEEeccCC-ccCCCcchhHhhcCC
Q 036266 26 KVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR-SQGSIPKSFESL----ASLEFLDLSSN-NLSGKIPKSLEALSN 99 (312)
Q Consensus 26 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l----~~L~~L~l~~N-~l~~~~p~~~~~l~~ 99 (312)
-.|+.||++++.++..-=..+.++++|+.|+|++|. ++..--..++.+ ++|+.|+|+++ ++|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368888888888764433446778888888888885 553222334443 36888888887 477544456777888
Q ss_pred CcEEEeeCce
Q 036266 100 LKELNVSYNR 109 (312)
Q Consensus 100 L~~L~l~~N~ 109 (312)
|++|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888763
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=64.09 Aligned_cols=32 Identities=28% Similarity=0.376 Sum_probs=28.5
Q ss_pred CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|+++.||+++.++.+.++||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 57899999999999998778899999998754
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=97.84 E-value=2e-06 Score=67.77 Aligned_cols=85 Identities=13% Similarity=0.096 Sum_probs=64.0
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCc-CCcCCCcCccCC----CCCCEEeCCCCc-CCCCCCccccCCCCC
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINR-LYGDIPITISGL----KDLTTLFLAGNR-SQGSIPKSFESLASL 76 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~l~~n~-l~~~~p~~~~~l~~L 76 (312)
+|+.|||+++.++..=-..+.++++|+.|+|+++. ++..-=..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 58999999999886544567899999999999996 443211224443 479999999985 664333457789999
Q ss_pred CEEeccCCc-cC
Q 036266 77 EFLDLSSNN-LS 87 (312)
Q Consensus 77 ~~L~l~~N~-l~ 87 (312)
+.|+|+++. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 999999985 55
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.73 E-value=8e-06 Score=65.50 Aligned_cols=109 Identities=15% Similarity=0.125 Sum_probs=54.6
Q ss_pred CCCcEEeecCC-ccccc----CccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFSN-SLSGS----LPSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
+.|+.|+|++| .|... +-..+..=+.|+.|+|++|.+... +.+.+..=+.|++|+|++|++... +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 35666666664 54421 233344445666666666666532 222222335566666666666531 222
Q ss_pred cccCCCCCCEEeccCC---ccCC----CcchhHhhcCCCcEEEeeCcee
Q 036266 69 SFESLASLEFLDLSSN---NLSG----KIPKSLEALSNLKELNVSYNRL 110 (312)
Q Consensus 69 ~~~~l~~L~~L~l~~N---~l~~----~~p~~~~~l~~L~~L~l~~N~~ 110 (312)
.+..-+.|+.|+|++| .+.. .+-+.+..-++|+.|+++.|.+
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 3334455666666644 2221 1223444445666666655543
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=64.65 Aligned_cols=102 Identities=14% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.+.+..+-.+ .-...|.+++.|+.+.+. +.+...-..+|.++++|+.+++..+ ++..-..+|.+|.+|+.+.+.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 3444444433222 333445555555555554 2333344445555555555555543 332334455555556655554
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCc
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYN 108 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N 108 (312)
++ ++..-..+|.++++|+.+++.+|
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 33 44233345555555655555544
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=6.6e-05 Score=56.16 Aligned_cols=57 Identities=25% Similarity=0.317 Sum_probs=41.1
Q ss_pred CEEeccCCcCC-cCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccC
Q 036266 29 IGLDLSINRLY-GDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLS 87 (312)
Q Consensus 29 ~~L~l~~N~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 87 (312)
+.++-+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 24554433 46888888888888665667788888888888888764
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00018 Score=65.03 Aligned_cols=31 Identities=23% Similarity=0.372 Sum_probs=27.2
Q ss_pred CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|++|.||+++.++ ++++||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 56799999999999998776 99999987765
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0007 Score=58.53 Aligned_cols=75 Identities=8% Similarity=-0.021 Sum_probs=52.4
Q ss_pred ccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC---CCceeeeeeeeeecccccEEEEecc
Q 036266 156 NEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR---HRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
...+.++.|.+..+|+... +++.+++|+.... ....+.+|.+.|+.+. ...+.+++.+.... ...+++||+
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~~~lvme~ 112 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GHSFLLLEA 112 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SEEEEEEEC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--CceEEEEEe
Confidence 3456789999999999875 4678899987643 2456788988887774 24566777665432 346777778
Q ss_pred cCCC
Q 036266 233 MPNG 236 (312)
Q Consensus 233 ~~~g 236 (312)
+++.
T Consensus 113 l~G~ 116 (312)
T 3jr1_A 113 LNKS 116 (312)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7754
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00015 Score=54.10 Aligned_cols=57 Identities=26% Similarity=0.309 Sum_probs=38.4
Q ss_pred CEEeCCCCcCC-CCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 53 TTLFLAGNRSQ-GSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 53 ~~L~l~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
..++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 36777777775 35564432 35777888888877555566777777778887777654
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00015 Score=64.45 Aligned_cols=104 Identities=11% Similarity=0.079 Sum_probs=70.9
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.+.+..+ +...-...|.++..|+.+.+..+ +...-..+|.++.+|+.+.+..+ +...-...|.++.+|+.+++
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 35666666544 34344566778888888888766 55455667777888888877654 44344456778888888888
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYN 108 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N 108 (312)
.++.++..-+.+|.++.+|+.+++..+
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc
Confidence 877777444567778888888887544
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=65.44 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=75.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.+.+. +.++..-...|.++++|+.+++..+ ++..-..+|.++++|+.+.+..+ ++..-..+|.+|.+|+.+++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~ 364 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEY 364 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEE
Confidence 578888886 5667555678999999999999876 66567788999999999999765 66455678999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
.+|... -..+....+|+.+.+..|.+.
T Consensus 365 ~~~~~~---~~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 365 SGSRSQ---WNAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp SSCHHH---HHTCBCCCCC-----------
T ss_pred CCceee---hhhhhccCCCCEEEeCCCCEE
Confidence 998654 256777888998888776553
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00014 Score=65.10 Aligned_cols=101 Identities=13% Similarity=0.025 Sum_probs=77.5
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
+.++.+.+..+.+ ....|..+.+|+.+.+.++ +...-+.+|.++++|+.+++..+ ++..-..+|.+|.+|+.+++
T Consensus 276 ~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 276 SGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 3455666655442 2356888999999999866 66566778999999999999754 66455678999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYN 108 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N 108 (312)
..| ++..-..+|.++.+|+.+++..+
T Consensus 351 p~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 351 PLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred Ccc-ccEehHHHhhCCCCCCEEEECCC
Confidence 877 66455678999999999998655
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00016 Score=62.66 Aligned_cols=131 Identities=8% Similarity=0.041 Sum_probs=70.1
Q ss_pred ceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc--eeeeeeeee----ecccccEEEEec
Q 036266 158 WHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN--LIKILTTIA----ILILKPWYLSSC 231 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~----~~~~~~~~l~~~ 231 (312)
.+.++.|....+|+....++ .+++|...... ....+..|..+++.+.... +.+++.... .......+++++
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 34566777888999876555 68899887521 2234556777766654222 223322100 001123466677
Q ss_pred ccCCCC--------------------------------------HHHHHH------------HHHHHHHHHHHHhC----
Q 036266 232 VMPNGD--------------------------------------FPERLN------------IMIDMALAFEYLHH---- 257 (312)
Q Consensus 232 ~~~~g~--------------------------------------~~~~~~------------i~~~i~~~l~ylH~---- 257 (312)
++++.. |..... +...+.+.++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 777541 111000 00012233344431
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 258 ~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.....++|+|+.+.||+++++..+.++||+.+..
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 1134689999999999999876668999987754
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00094 Score=57.24 Aligned_cols=126 Identities=12% Similarity=0.095 Sum_probs=77.5
Q ss_pred cccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCce-eeeeeeeeecccccEEEEeccc
Q 036266 155 FNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL-IKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 155 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+...+.++.|....+|++ +.+++|+....... .....+|..+++.+....+ .+++++.. + .-+++++|+
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~--~~~~v~e~i 89 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--A--TGVMVTRYI 89 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--T--TCCEEEECC
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--C--CCEEEEeec
Confidence 333678888999999998 45888888653221 1123457777766542222 34444322 1 234667788
Q ss_pred -CCCCH--HHH---HHHHHHHHHHHHHHhCCC------------------------------------------------
Q 036266 234 -PNGDF--PER---LNIMIDMALAFEYLHHGR------------------------------------------------ 259 (312)
Q Consensus 234 -~~g~~--~~~---~~i~~~i~~~l~ylH~~~------------------------------------------------ 259 (312)
++.++ ... -.++.++++.|+-+|...
T Consensus 90 ~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~ 169 (301)
T 3dxq_A 90 AGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAH 169 (301)
T ss_dssp TTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSS
T ss_pred CCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhc
Confidence 44322 111 235677777777777421
Q ss_pred --CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 --STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 --~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|+.|.||+ ..++.+.++||..|..
T Consensus 170 ~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 170 PLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 122799999999999 5567789999987654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00047 Score=61.56 Aligned_cols=119 Identities=21% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
+.|+.+.+..+..+ .-...|.++..|+.+....+.+ ....|..+.+|+.+.+..+ ++..-..+|.++.+|+.++|
T Consensus 253 ~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~l 327 (394)
T 4fs7_A 253 TDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDL 327 (394)
T ss_dssp SSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECC
T ss_pred ccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEe
Confidence 56888888887654 6677899999999998887653 3457889999999999765 66455678999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC--ccCCCcccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN--VPFGNFSSQSF 128 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~--~~~~~l~~l~~ 128 (312)
.++ ++..-..+|.++++|+.+++..| ++ .++.. ....+|..+.+
T Consensus 328 p~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~l 373 (394)
T 4fs7_A 328 PYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVEL 373 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEE
T ss_pred CCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEE
Confidence 755 66444678999999999999766 44 34332 12234544444
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00031 Score=63.64 Aligned_cols=70 Identities=9% Similarity=0.045 Sum_probs=43.0
Q ss_pred ceEeccCCcEEEEEEEEcC--------CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCce-eeeeeeeeecccccEEE
Q 036266 158 WHLLGTESLGSVYKWIFLD--------ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL-IKILTTIAILILKPWYL 228 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~l 228 (312)
.+.++.|....+|++...+ ++.+++|+..... ....+.+|..+++.+...++ .++++.+. + .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~----g~ 149 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G----GR 149 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T----EE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C----CE
Confidence 4567788889999998653 4679999884311 11344578888877753333 45555442 1 15
Q ss_pred EecccCC
Q 036266 229 SSCVMPN 235 (312)
Q Consensus 229 ~~~~~~~ 235 (312)
+++|+++
T Consensus 150 v~e~l~G 156 (429)
T 1nw1_A 150 LEEYIPS 156 (429)
T ss_dssp EECCCCE
T ss_pred EEEEeCC
Confidence 5566653
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00092 Score=60.97 Aligned_cols=60 Identities=8% Similarity=0.151 Sum_probs=36.5
Q ss_pred ceEeccCCcEEEEEEEEcC-CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCce-eeeeeee
Q 036266 158 WHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL-IKILTTI 218 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~ 218 (312)
.+.++.|....+|++...+ +..+++|+........ -...+|..+++.+...++ .++++.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4567778888999998754 4678899875432111 112578888888764444 3555554
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0025 Score=55.09 Aligned_cols=30 Identities=20% Similarity=0.193 Sum_probs=25.5
Q ss_pred CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|+++.||+++ + .+.++||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 45689999999999999 4 899999987654
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00093 Score=59.34 Aligned_cols=126 Identities=11% Similarity=0.096 Sum_probs=70.4
Q ss_pred eEeccCCcEEEEEEEEcC--------CcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc-eeeeeeeeeecccccEEEE
Q 036266 159 HLLGTESLGSVYKWIFLD--------ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN-LIKILTTIAILILKPWYLS 229 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~l~ 229 (312)
+.+..|....+|++...+ ++.+++|+.... ......+.+|.++++.+.-.+ ..++++.+. + .++
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C----ccE
Confidence 456667778899988642 467999986432 123345568888887775222 245555543 2 156
Q ss_pred ecccCCCCH------------------------------------HHHHHHHHHHH-------------------HHHHH
Q 036266 230 SCVMPNGDF------------------------------------PERLNIMIDMA-------------------LAFEY 254 (312)
Q Consensus 230 ~~~~~~g~~------------------------------------~~~~~i~~~i~-------------------~~l~y 254 (312)
|+|+++..+ .+..++..++. +.+.+
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 667765311 11111222211 11222
Q ss_pred ----HhC-CCCCCceecCCCCCCeeeCCC----CceEEccccchhh
Q 036266 255 ----LHH-GRSTPMVHCDLKPSNNLLDED----MVAHVSDFNISKL 291 (312)
Q Consensus 255 ----lH~-~~~~~iiHrDlkp~Nill~~~----~~~kl~DFG~a~~ 291 (312)
|.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 211 123468999999999999876 7899999998765
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00056 Score=60.52 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=24.7
Q ss_pred CCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 261 ~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..++|+|+.+.||+++++. +.++||..|..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 3589999999999998655 89999987754
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0026 Score=56.31 Aligned_cols=100 Identities=16% Similarity=0.149 Sum_probs=52.5
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-..+|.++++|+.+.+.++.++..-+.+|.+|.+|+.++|.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 4555555443 34333445555666666665443 333444455666666666666555553344556666666666665
Q ss_pred CCccCCCcchhHhhcCCCcEEEe
Q 036266 83 SNNLSGKIPKSLEALSNLKELNV 105 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l 105 (312)
++ ++..-..+|.++++|+.+.+
T Consensus 319 ~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 319 TA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TT-CCEECTTTTTTCTTCCCCCC
T ss_pred cc-ccEEHHHHhhCCCCCCEEEE
Confidence 43 44222345556666655554
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.008 Score=52.12 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=27.4
Q ss_pred CCCceecCCCCCCeeeCCC----CceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDED----MVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~----~~~kl~DFG~a~~ 291 (312)
...++|+|+.+.||+++.+ +.+.++||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4579999999999999874 6799999998765
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00044 Score=55.35 Aligned_cols=86 Identities=17% Similarity=0.191 Sum_probs=54.3
Q ss_pred ccCCCCCEEeccCC-cCCc----CCCcCccCCCCCCEEeCCCCcCCCC----CCccccCCCCCCEEeccCCccCCCcc--
Q 036266 23 QNLKVLIGLDLSIN-RLYG----DIPITISGLKDLTTLFLAGNRSQGS----IPKSFESLASLEFLDLSSNNLSGKIP-- 91 (312)
Q Consensus 23 ~~l~~L~~L~l~~N-~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p-- 91 (312)
.+-+.|+.|+|++| .+.. .+-+.+..-+.|+.|+|++|++... +.+.+..-+.|++|+|++|+|...--
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 44567888888875 6542 1334455556788888888887632 23334445778888888888874322
Q ss_pred --hhHhhcCCCcEEEeeCc
Q 036266 92 --KSLEALSNLKELNVSYN 108 (312)
Q Consensus 92 --~~~~~l~~L~~L~l~~N 108 (312)
+++..-+.|++|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 23333456888888754
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.015 Score=50.69 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=27.8
Q ss_pred CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|+.+.||++++++.+.++||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35689999999999999878899999987655
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.55 E-value=0.016 Score=52.24 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=26.6
Q ss_pred CCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 261 ~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 45899999999999 7788999999998765
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=93.93 E-value=0.13 Score=41.36 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=71.8
Q ss_pred HHHHhhcCCCCceeeeeeeeeecccccEEEEec---------ccCCCCHHHHHHHHHHHHHHHHHHhCCCCCCceecCCC
Q 036266 199 KCEVHKNVRHRNLIKILTTIAILILKPWYLSSC---------VMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHCDLK 269 (312)
Q Consensus 199 e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~---------~~~~g~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlk 269 (312)
|+.++.. .||+.+.. .+-...+ .+.+.+. .+..-+..++++++.+|+...++++. -+|--+.
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD--~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~ 106 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRD--SFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLA 106 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSS--EEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCS
T ss_pred HHHHHhc-cCCcccce-EEEEccc--EEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEe
Confidence 4444433 57887755 3323222 3333322 23334788999999999988876662 4677788
Q ss_pred CCCeeeCCCCceEEccccchhh--------------hhhhhhhhhcCCCCCcccccC
Q 036266 270 PSNNLLDEDMVAHVSDFNISKL--------------LGVLLPETFTRKKPTIEMIIG 312 (312)
Q Consensus 270 p~Nill~~~~~~kl~DFG~a~~--------------~g~~~~e~~tg~~p~~e~~~~ 312 (312)
|+|+++|.++.+++.-.|+-.. +-.++..++++++.|.+++.|
T Consensus 107 P~NL~f~~~~~p~i~~RGik~~l~P~~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 107 PDELFFTRDGLPIAKTRGLQNVVDPLPVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp GGGEEECTTSCEEESCCEETTTBSCCCCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred cceEEEcCCCCEEEEEccCccCCCCCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 9999999999999999886333 256777889999998877654
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=89.94 E-value=0.32 Score=39.27 Aligned_cols=69 Identities=9% Similarity=0.058 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHHHHH-HHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------------hhhhhhhhc
Q 036266 237 DFPERLNIMIDMALAFE-YLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------------GVLLPETFT 301 (312)
Q Consensus 237 ~~~~~~~i~~~i~~~l~-ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------------g~~~~e~~t 301 (312)
+..++++++.+++.... +++ .-+|--+.|+|+++|.++.+++.-.|+-..+ -.++..++.
T Consensus 83 ~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP~e~~ee~fl~qyKali~all~ 157 (219)
T 4ano_A 83 TLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFLHVGVKESLPPDEWDDERLLREVKATVLALTE 157 (219)
T ss_dssp CHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEESCCEETTTBSSCSCCHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEEEcCCcccCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 67788889998888776 555 3466677899999999999999999974332 556667788
Q ss_pred CCCCCcccc
Q 036266 302 RKKPTIEMI 310 (312)
Q Consensus 302 g~~p~~e~~ 310 (312)
+++.|++++
T Consensus 158 ~K~~Fe~l~ 166 (219)
T 4ano_A 158 GEYRFDEYL 166 (219)
T ss_dssp CSSCHHHHH
T ss_pred CCCCHHHHH
Confidence 887776653
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=86.26 E-value=0.053 Score=49.36 Aligned_cols=54 Identities=11% Similarity=0.013 Sum_probs=13.6
Q ss_pred cEEEEEEEEcC-CcEEEE------EEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeee
Q 036266 166 LGSVYKWIFLD-ETNVAI------KVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219 (312)
Q Consensus 166 ~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 219 (312)
||.||+|.+.. ...||| |..+... .+....+.+|..++++.+|||+++.+++..
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 99999999753 356888 6655322 233456788999999999999999987653
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=83.22 E-value=0.58 Score=41.52 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=25.5
Q ss_pred CceecCCCCCCeee------CCCCceEEccccchhh
Q 036266 262 PMVHCDLKPSNNLL------DEDMVAHVSDFNISKL 291 (312)
Q Consensus 262 ~iiHrDlkp~Nill------~~~~~~kl~DFG~a~~ 291 (312)
.++|+|+.+.||++ +++..++++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998866
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 312 | ||||
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-20 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-19 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 9e-19 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-18 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 1e-18 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-18 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-17 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-17 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 2e-17 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 4e-17 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 7e-17 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 1e-16 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-16 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-16 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-16 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-16 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-16 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-15 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-15 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 4e-15 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-15 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-15 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-14 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-14 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 4e-14 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-14 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 8e-14 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-13 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-13 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 3e-13 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 5e-13 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 7e-13 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 8e-13 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-12 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-12 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-12 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-12 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 6e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 6e-12 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-10 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-08 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-08 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 9e-12 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-11 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-11 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-11 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-10 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-07 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-04 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 4e-04 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-11 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-11 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-10 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 1e-10 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-10 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-10 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-10 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 6e-10 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-09 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-09 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-09 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 5e-09 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 9e-09 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-08 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-08 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 4e-08 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-07 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 4e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 5e-07 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-06 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 2e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 5e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 6e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 9e-05 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 1e-06 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 4e-06 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 8e-06 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-04 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.003 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 7e-04 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.001 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 0.001 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.002 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 0.004 |
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.7 bits (214), Expect = 3e-20
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LG G V+ + T VAIK + +F + +V K +RH L+
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 75
Query: 213 KILTTIAILILKPWYLSSCVMPNGD--------------FPERLNIMIDMALAFEYLHHG 258
++ A++ +P Y+ + M G P+ +++ +A Y+
Sbjct: 76 QL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER- 131
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DL+ +N L+ E++V V+DF +++L+
Sbjct: 132 --MNYVHRDLRAANILVGENLVCKVADFGLARLI 163
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 85.2 bits (210), Expect = 1e-19
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 32/176 (18%)
Query: 144 SYLDILQATDEFNEW---------HLLGTESLGSVYKWIFL----DETNVAIKVFNLQL- 189
++ D +A EF + ++G G V E VAIK
Sbjct: 8 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67
Query: 190 ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDF----------- 238
E+ R F S+ + H N+I + + P + + M NG
Sbjct: 68 EKQRRDFLSEASIMGQFDHPNVIHLE--GVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 125
Query: 239 --PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ + ++ +A +YL VH DL N L++ ++V VSDF +S+ L
Sbjct: 126 TVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 178
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.3 bits (203), Expect = 9e-19
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 23/150 (15%)
Query: 159 HLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILT 216
+G+ S G+VYK + + VA+K+ N+ + ++F ++ V + RH N++
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF-- 69
Query: 217 TIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPM 263
+ + + + ++I A +YLH +
Sbjct: 70 -MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSI 125
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+H DLK +N L ED+ + DF ++ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.0 bits (202), Expect = 1e-18
Identities = 28/154 (18%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LG G V+ + T VA+K + +F ++ + K ++H+ L+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLV 71
Query: 213 KILTTIAILILKPWYLSSCVMPNG--------------DFPERLNIMIDMALAFEYLHHG 258
++ A++ +P Y+ + M NG + L++ +A ++
Sbjct: 72 RLY---AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE-- 126
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL+ +N L+ + + ++DF +++L+
Sbjct: 127 -ERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.4 bits (203), Expect = 1e-18
Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 18/156 (11%)
Query: 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRS-FDSKCEVHKNVRH 208
D+F + LG + G V+K +A K+ +L+++ A R+ + +V
Sbjct: 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63
Query: 209 RNLIKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYLH 256
++ A + M G + I + YL
Sbjct: 64 PYIVGFYG--AFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 257 HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H D+KPSN L++ + DF +S L
Sbjct: 122 E--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.5 bits (198), Expect = 4e-18
Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 23/150 (15%)
Query: 161 LGTESLGSVYKWIFL---DETNVAIKVFNLQLERAFR-SFDSKCEVHKNVRHRNLIKILT 216
LG + GSV + ++ + +VAIKV E+A + ++ + + ++++
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL-- 74
Query: 217 TIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPM 263
I + + L + G ++ +++ +YL
Sbjct: 75 -IGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNF 130
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
VH DL N LL A +SDF +SK LG
Sbjct: 131 VHRDLAARNVLLVNRHYAKISDFGLSKALG 160
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.9 bits (194), Expect = 1e-17
Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 21/162 (12%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHR 209
+++ + +GT S G K D + K + E + S+ + + ++H
Sbjct: 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63
Query: 210 NLIKILTTIAILILKPWYLSSCVMPNGDF----------------PERLNIMIDMALAFE 253
N+++ I Y+ GD L +M + LA +
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 254 YLH--HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
H ++H DLKP+N LD + DF ++++L
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 165
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.1 bits (194), Expect = 1e-17
Identities = 25/151 (16%), Positives = 55/151 (36%), Gaps = 20/151 (13%)
Query: 161 LGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILT--TI 218
+G G V++ VA+K+F+ + ER++ +++ +RH N++ +
Sbjct: 11 IGKGRFGEVWR-GKWRGEEVAVKIFSSREERSWF-REAEIYQTVMLRHENILGFIAADNK 68
Query: 219 AILILKPWYLSSCVMPNGD-----------FPERLNIMIDMALAFEYLHH-----GRSTP 262
+L S +G + + + A +LH
Sbjct: 69 DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA 128
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+ H DLK N L+ ++ ++D ++
Sbjct: 129 IAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 78.2 bits (192), Expect = 2e-17
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
+ H LG G VY+ ++ VA+K F + V K ++H NL
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNL 75
Query: 212 IKILTTIAILILKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHH 257
+++L P+Y+ + M G+ L + ++ A EYL
Sbjct: 76 VQLLGVC--TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE- 132
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+H DL N L+ E+ + V+DF +S+L+
Sbjct: 133 --KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 165
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.7 bits (191), Expect = 4e-17
Identities = 32/158 (20%), Positives = 54/158 (34%), Gaps = 19/158 (12%)
Query: 149 LQATDEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQLERAFRSFDSKCEVHKNVR 207
L D + LG + G VYK + A KV + + E + + ++ +
Sbjct: 8 LNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD 67
Query: 208 HRNLIKILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEY 254
H N++K+L A ++ G + + A Y
Sbjct: 68 HPNIVKLLD--AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 125
Query: 255 LHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
LH ++H DLK N L D ++DF +S
Sbjct: 126 LH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 160
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.6 bits (188), Expect = 7e-17
Identities = 33/156 (21%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFN---LQLERAFRSFDSKCEVHKNVRH 208
++F LG G+VY + +A+KV L+ + E+ ++RH
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 209 RNLIKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYLH 256
N++++ YL P G + ++A A Y H
Sbjct: 66 PNILRLYG--YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 123
Query: 257 HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S ++H D+KP N LL ++DF S
Sbjct: 124 ---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 156
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.3 bits (187), Expect = 1e-16
Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 19/171 (11%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
+ LGT G V + + +VAIK+ + F + +V N+ H L+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLV 62
Query: 213 KILTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGR 259
++ +P ++ + M NG + L + D+ A EYL
Sbjct: 63 QLYG--VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES-- 118
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPTIEMI 310
+H DL N L+++ V VSDF +S+ + + K +
Sbjct: 119 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.3 bits (187), Expect = 1e-16
Identities = 30/149 (20%), Positives = 59/149 (39%), Gaps = 23/149 (15%)
Query: 161 LGTESLGSVYKWIFLDETN---VAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKIL 215
LG+ + G+V K + + VA+K+ + ++ V + + + ++++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM- 73
Query: 216 TTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPM 263
I I + W L + G + ++ +++ +YL +
Sbjct: 74 --IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 128
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DL N LL A +SDF +SK L
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKAL 157
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 76.6 bits (188), Expect = 1e-16
Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 21/157 (13%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNL---QLERAFRSFDSKCEVHKNVR 207
F++ +G S G+VY + + VAIK + Q ++ + + +R
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 208 HRNLIKILTTIAILILKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYL 255
H N I+ L +L E + YL
Sbjct: 74 HPNTIQYRG--CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYL 131
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H S M+H D+K N LL E + + DF + ++
Sbjct: 132 H---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 75.4 bits (185), Expect = 2e-16
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
E +G G V VA+K ++ + ++F ++ V +RH NL+
Sbjct: 7 KELKLLQTIGKGEFGDVMLGD-YRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLV 63
Query: 213 KILTTIAILILKPWYLSSCVMPNGDF--------------PERLNIMIDMALAFEYLHHG 258
++L I + Y+ + M G L +D+ A EYL
Sbjct: 64 QLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE-- 120
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
VH DL N L+ ED VA VSDF ++K
Sbjct: 121 -GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA 153
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.0 bits (186), Expect = 2e-16
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 146 LDILQATDEFNEWHLLGTESLGSVYKWIFLDE-----TNVAIKVFNLQL-ERAFRSFDSK 199
L IL+ T+ F + +LG+ + G+VYK +++ E VAIK +A + +
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 200 CEVHKNVRHRNLIKILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMI 246
V +V + ++ ++L + L + +MP G LN +
Sbjct: 62 AYVMASVDNPHVCRLLGIC---LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 247 DMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+A YL R +VH DL N L+ ++DF ++KLLG
Sbjct: 119 QIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 74.7 bits (183), Expect = 3e-16
Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 19/153 (12%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLI 212
E +G+ G V+ +L++ VAIK F + EV + H L+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLV 63
Query: 213 KILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGR 259
++ L P L M +G L + +D+ + +
Sbjct: 64 QLYG--VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG---MAYLE 118
Query: 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
++H DL N L+ E+ V VSDF +++ +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 151
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.5 bits (180), Expect = 1e-15
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 17/145 (11%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
+G + G+VY + + VAI+ NLQ + ++ V + ++ N++ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD-- 84
Query: 219 AILILKPWYLSSCVMPNGDF-----------PERLNIMIDMALAFEYLHHGRSTPMVHCD 267
+ L+ ++ + G + + + A E+LH S ++H D
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRD 141
Query: 268 LKPSNNLLDEDMVAHVSDFNISKLL 292
+K N LL D ++DF +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQI 166
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.3 bits (177), Expect = 2e-15
Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 19/158 (12%)
Query: 161 LGTESLGSVYKWIFLDETN-VAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTT 217
+G S +VYK + + T VA + + + F + E+ K ++H N+++ +
Sbjct: 17 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDS 76
Query: 218 IAILIL--KPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPM 263
+ K L + +M +G + + ++LH R+ P+
Sbjct: 77 WESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT-RTPPI 135
Query: 264 VHCDLKPSNNLL-DEDMVAHVSDFNISKLLGVLLPETF 300
+H DLK N + + D ++ L +
Sbjct: 136 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 173
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.8 bits (175), Expect = 4e-15
Identities = 35/168 (20%), Positives = 63/168 (37%), Gaps = 20/168 (11%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN-----VAIKVFNLQL-ERAFRSFDSKCEVHKNV 206
++G G VYK + + VAIK E+ F + +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66
Query: 207 RHRNLIKI---------LTTIAILILKPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYL 255
H N+I++ + I + +G+F + ++ +A +YL
Sbjct: 67 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRK 303
+ VH DL N L++ ++V VSDF +S++L T+T
Sbjct: 127 A---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 171
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.2 bits (174), Expect = 7e-15
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 15/153 (9%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNL-QLERAFRSFDSKCEVHKNVRHRN 210
++++ LG + G V + E VA+K+ ++ + + + ++K + H N
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64
Query: 211 LIKIL-----TTIAILIL---KPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYLHHGRS 260
++K I L L L + P+ PE + YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---G 121
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+ H D+KP N LLDE +SDF ++ +
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFR 154
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 71.0 bits (173), Expect = 8e-15
Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 24/168 (14%)
Query: 160 LLGTESLGSVYKWIFLDETN----VAIKVFNLQLERAFRS-FDSKCEVHKNVRHRNLIKI 214
+G G V++ I++ N VAIK + R F + + H +++K+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 215 LTTIAILILKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRST 261
I ++ P ++ + G D + ++ A YL S
Sbjct: 74 ---IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SK 127
Query: 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPTIEM 309
VH D+ N L+ + + DF +S+ + ++ K I+
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 175
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (170), Expect = 2e-14
Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 26/160 (16%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN----VAIKVFNLQL---ERAFRSFDSKCEVHKN 205
+ LG S G V + + + VA+K + A F + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAF 252
+ HRNLI++ +++ P + + + P G + +A
Sbjct: 68 LDHRNLIRL---YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124
Query: 253 EYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
YL S +H DL N LL + + DF + + L
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.1 bits (171), Expect = 2e-14
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 13/153 (8%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRH 208
+F LGT S G V+ + A+KV ++ + + + + V H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 209 RNLIKILTTI--------AILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRS 260
+I++ T + ++ L S + + FP + A L + S
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFY-AAEVCLALEYLHS 122
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+++ DLKP N LLD++ ++DF +K +
Sbjct: 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 155
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 68.9 bits (168), Expect = 4e-14
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 17/156 (10%)
Query: 150 QATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKN 205
+ ++F +LG S +V L AIK+ + E + +V
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 206 VRHRNLIKILTT--------IAILILKPWYLSSCVMPNGDFPER--LNIMIDMALAFEYL 255
+ H +K+ T + K L + G F E ++ A EYL
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
H ++H DLKP N LL+EDM ++DF +K+
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 157
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 69.4 bits (169), Expect = 4e-14
Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 17/152 (11%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRH 208
D+F+ LGT S G V + A+K+ + Q + ++ + + V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 209 RNLIKILTTIAILILKPW--------YLSSCVMPNGDFPER--LNIMIDMALAFEYLHHG 258
L+K+ + + S + G F E + L FEYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH-- 158
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290
S +++ DLKP N L+D+ V+DF +K
Sbjct: 159 -SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 68.4 bits (166), Expect = 8e-14
Identities = 25/167 (14%), Positives = 59/167 (35%), Gaps = 11/167 (6%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRN 210
++++ +G + G VYK A+K L+ E + + + K ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 211 LIKILTT--------IAILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTP 262
++K+ + L + G + + +
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHDRR 120
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLLGVLLPETFTRKKPTIEM 309
++H DLKP N L++ + ++DF +++ G+ + +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.9 bits (165), Expect = 1e-13
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 24/156 (15%)
Query: 155 FNEWHLLGTESLGSVYKWIFLDETN----VAIKVFNLQLERAFRS-FDSKCEVHKNVRHR 209
FNE ++G G VY LD A+K N + S F ++ + K+ H
Sbjct: 31 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 210 NLIKILTTIAILILKPWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLH 256
N++ +L I + + M +GD + + + +A +
Sbjct: 89 NVLSLLG-ICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG---MK 144
Query: 257 HGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
S VH DL N +LDE V+DF +++ +
Sbjct: 145 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 180
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.1 bits (163), Expect = 2e-13
Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 48/183 (26%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN------VAIKVFNLQLERAFR-SFDSKCEVHKN 205
+ +LG+ + G V + VA+K+ + + + R + S+ ++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96
Query: 206 V-RHRNLIKILTTIAILILKPWYLSSCVMPNGD--------------------------- 237
+ H N++ +L A + P YL GD
Sbjct: 97 LGSHENIVNLLG--ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 154
Query: 238 --------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
F + L +A E+L VH DL N L+ V + DF ++
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLA 211
Query: 290 KLL 292
+ +
Sbjct: 212 RDI 214
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.2 bits (163), Expect = 3e-13
Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 18/160 (11%)
Query: 148 ILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFN-LQLERAFRSFDSKCEVHKN 205
+ + +G + G V ++ VAIK + + + + + ++
Sbjct: 3 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLR 62
Query: 206 VRHRNLIKIL---TTIAILILKPWYLSSCVMPNGDF----------PERLNIMIDMALAF 252
RH N+I I I +K YL + +M + + +
Sbjct: 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122
Query: 253 EYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+Y+H S ++H DLKPSN LL+ + DF ++++
Sbjct: 123 KYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 159
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 66.7 bits (162), Expect = 5e-13
Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 24/160 (15%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLD-ETNVAIKVFNL------QLERAFRSFDSKCEVHKN 205
++F+ ++G G VY D A+K + Q E + +
Sbjct: 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFE 253
++ + A +M GD + ++ L E
Sbjct: 64 GDCPFIVCMSY--AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 121
Query: 254 YLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
++H+ +V+ DLKP+N LLDE +SD ++
Sbjct: 122 HMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 158
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 7e-13
Identities = 27/146 (18%), Positives = 57/146 (39%), Gaps = 16/146 (10%)
Query: 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKIL-- 215
+G + G+V+K VA+K L E S + + K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 216 ------TTIAILILKPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYLHHGRSTPMVHCD 267
T+ NGD + + + + H ++H D
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRD 126
Query: 268 LKPSNNLLDEDMVAHVSDFNISKLLG 293
LKP N L++ + +++F +++ G
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFG 152
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (159), Expect = 8e-13
Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 38/172 (22%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLD---ETNVAIKVFNLQLER-AFRSFDSKCEVHKNV-R 207
++ ++G + G V K + AIK + R F + EV +
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69
Query: 208 HRNLIKILTTIAILILKPWYLSSCVMPNGDF----------------------------P 239
H N+I +L A YL+ P+G+
Sbjct: 70 HPNIINLLG--ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 127
Query: 240 ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291
+ L+ D+A +YL +H DL N L+ E+ VA ++DF +S+
Sbjct: 128 QLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG 176
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 65.5 bits (159), Expect = 1e-12
Identities = 29/156 (18%), Positives = 50/156 (32%), Gaps = 21/156 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
D ++ LGT + G V++ N A K E + + + +RH L
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85
Query: 212 IKILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHG 258
+ + A + M G+ E + M + ++H
Sbjct: 86 VNLHD--AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 143
Query: 259 RSTPMVHCDLKPSNNLL--DEDMVAHVSDFNISKLL 292
VH DLKP N + + DF ++ L
Sbjct: 144 N---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL 176
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 63.7 bits (154), Expect = 3e-12
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 48/183 (26%)
Query: 153 DEFNEWHLLGTESLGSVYK------WIFLDETNVAIKVFNLQLERAFRS-FDSKCEVHKN 205
+ +G + G V++ + T VA+K+ + ++ F + +
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGD---------------------------- 237
+ N++K+L + KP L M GD
Sbjct: 73 FDNPNIVKLL--GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130
Query: 238 --------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
E+L I +A YL VH DL N L+ E+MV ++DF +S
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLS 187
Query: 290 KLL 292
+ +
Sbjct: 188 RNI 190
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.6 bits (154), Expect = 4e-12
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 13/152 (8%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRH 208
++F+ LLG + G V A+K+ ++ + ++ V +N RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 209 RNLIKILTT--------IAILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRS 260
L + + L + F E A L + S
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY-GAEIVSALEYLHS 123
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+V+ D+K N +LD+D ++DF + K
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 63.2 bits (153), Expect = 4e-12
Identities = 34/161 (21%), Positives = 63/161 (39%), Gaps = 24/161 (14%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
+ + +LG V + I A+K+ ++ +F + + + ++ ++
Sbjct: 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62
Query: 212 IKILTTIAILI-LKPWYLSSCV-------MPNGDF------------PERLNIMIDMALA 251
++ ++ +I LK Y ++ M G+ E IM +
Sbjct: 63 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122
Query: 252 FEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
LH +VH DLKP N LLD+DM ++DF S L
Sbjct: 123 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 160
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 63.2 bits (153), Expect = 6e-12
Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 21/157 (13%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL 211
D ++ LG+ + G V++ + K N + ++ + + H L
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88
Query: 212 IKILTTIAILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHG 258
I + A L + G+ E +N M +++H
Sbjct: 89 INLHD--AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-- 144
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHV--SDFNISKLLG 293
+VH D+KP N + + + V DF ++ L
Sbjct: 145 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 62.8 bits (151), Expect = 6e-12
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALC 135
DL +N + G +P+ L L L LNVS+N L GEIP F ++ +N LC
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 58.2 bits (139), Expect = 2e-10
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 57 LAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
L NR G++P+ L L L++S NNL G+IP L + N+ P
Sbjct: 251 LRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 52.4 bits (124), Expect = 2e-08
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
+L +N + G+LP + LK L L++S N L G+IP L+ A N+ P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 51.7 bits (122), Expect = 4e-08
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 32 DLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIP 91
DL NR+YG +P ++ LK L +L ++ N G IP +L + ++N P
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.2 bits (150), Expect = 9e-12
Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 38/175 (21%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN------VAIKVFNL-QLERAFRSFDSKCEVHKN 205
D LG + G V + VA+K+ R+ S+ ++ +
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGDF--------------------------- 238
+ H + L P + G+
Sbjct: 73 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132
Query: 239 -PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ +A E+L S +H DL N LL E V + DF +++ +
Sbjct: 133 LEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 184
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 62.1 bits (150), Expect = 1e-11
Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 21/160 (13%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVR 207
+D + +LG + V+ L +VA+KV L + F + + +
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 208 HRNLIKILTTIAI--LILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFE 253
H ++ + T Y+ + + ++ D A
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 125
Query: 254 YLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+ H ++H D+KP+N ++ V DF I++ +
Sbjct: 126 FSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 162
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.0 bits (147), Expect = 2e-11
Identities = 29/178 (16%), Positives = 55/178 (30%), Gaps = 43/178 (24%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFLDETN------VAIKVFNLQLERAFR-SFDSKCEVHKN 205
+ + LG + G V + VA+K+ R + S+ +V
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 206 V-RHRNLIKILTTIAILILKPWYLSSCVMPNGD--------------------------- 237
+ H N++ +L A I P + + GD
Sbjct: 83 LGNHMNIVNLLG--ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 238 ---FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ L+ +A +L +H DL N LL + + DF +++ +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDI 195
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (146), Expect = 3e-11
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 13/147 (8%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL-----ERAFRSFDSKCEVHKNVRHRNLIK 213
LG +VYK VAIK L + R+ + ++ + + H N+I
Sbjct: 5 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64
Query: 214 ILTTIA-------ILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRSTPMVHC 266
+L + L + N +I M + + L + ++H
Sbjct: 65 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 124
Query: 267 DLKPSNNLLDEDMVAHVSDFNISKLLG 293
DLKP+N LLDE+ V ++DF ++K G
Sbjct: 125 DLKPNNLLLDENGVLKLADFGLAKSFG 151
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.3 bits (145), Expect = 4e-11
Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 34/170 (20%)
Query: 153 DEFNEWHLLGTESLGSVYKWIF------LDETNVAIKVFNL-QLERAFRSFDSKCEVHKN 205
++ LG S G VY+ + ET VAIK N R F ++ V K
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79
Query: 206 VRHRNLIKILTTIAILILKPWYLSSCVMPNGD----------------------FPERLN 243
+++++L + +P + +M GD + +
Sbjct: 80 FNCHHVVRLLG--VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137
Query: 244 IMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+ ++A YL+ + VH DL N ++ ED + DF +++ +
Sbjct: 138 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 184
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 60.8 bits (146), Expect = 4e-11
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 21 NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80
I NLK L L L N + P+ S L L LF A N+ S +L ++ +L
Sbjct: 302 PISNLKNLTYLTLYFNNISDISPV--SSLTKLQRLFFANNKVSD--VSSLANLTNINWLS 357
Query: 81 LSSNNLSGKIPKSLEALSNLKELNVSYN 108
N +S P L L+ + +L ++
Sbjct: 358 AGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 57.7 bits (138), Expect = 4e-10
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 26/135 (19%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPIT--------------- 45
L + ++L +N +S P + L L L L N++ P+
Sbjct: 240 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQL 297
Query: 46 -----ISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNL 100
IS LK+LT L L N P SL L+ L ++N +S SL L+N+
Sbjct: 298 EDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNI 353
Query: 101 KELNVSYNRLEGEIP 115
L+ +N++ P
Sbjct: 354 NWLSAGHNQISDLTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 48.5 bits (114), Expect = 4e-07
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 26/126 (20%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L N L + +L L LDL+ N++ P +SGL LT L L N+
Sbjct: 224 LSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 279
Query: 67 P--------------------KSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVS 106
P +L +L +L L NN+S P + +L+ L+ L +
Sbjct: 280 PLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFA 337
Query: 107 YNRLEG 112
N++
Sbjct: 338 NNKVSD 343
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Query: 24 NLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSS 83
L L L + N++ P+ I +L L L GN+ + + SL +L LDL++
Sbjct: 195 KLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 250
Query: 84 NNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
N +S P L L+ L EL + N++ P
Sbjct: 251 NQISNLAP--LSGLTKLTELKLGANQISNISP 280
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 4e-04
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 32 DLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIP 91
D IN+++ D + L + L ++ ++ L + L +
Sbjct: 9 DTPINQIFTD-----TALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRLGIKS--I 59
Query: 92 KSLEALSNLKELNVSYNRLEGEIP 115
+E L+NL ++N S N+L P
Sbjct: 60 DGVEYLNNLTQINFSNNQLTDITP 83
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.2 bits (145), Expect = 5e-11
Identities = 32/159 (20%), Positives = 56/159 (35%), Gaps = 28/159 (17%)
Query: 155 FNEWHLLGTESLGSVYKWIFLDE-TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIK 213
+ + ++G S G VY+ D VAIK + + ++ + + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVR 77
Query: 214 ILTTIAILILKP----WYLSSCVMPNGDF---------------PERLNIMIDMALAFEY 254
+ K L +P + M + + Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 255 LHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISKLL 292
+H + H D+KP N LLD D V + DF +K L
Sbjct: 138 IHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.9 bits (144), Expect = 6e-11
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 17/156 (10%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHR 209
+ F + +G + G VYK VA+K L E + + + K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLIK---ILTTIAILILKPWY--------LSSCVMPNGDFPERLNIMIDMALAFEYLHHG 258
N++K ++ T L L + + + + P + + + + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH-- 119
Query: 259 RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLGV 294
S ++H DLKP N L++ + ++DF +++ GV
Sbjct: 120 -SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 154
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 7e-11
Identities = 30/151 (19%), Positives = 59/151 (39%), Gaps = 20/151 (13%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKIL- 215
+G+ + G+V + VAIK E + + + K++RH N+I +L
Sbjct: 25 PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 84
Query: 216 -----------TTIAILILKPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYLHHGRSTP 262
T +++ +M + E ++ M Y+H +
Sbjct: 85 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAG 141
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
++H DLKP N ++ED + DF +++
Sbjct: 142 IIHRDLKPGNLAVNEDCELKILDFGLARQAD 172
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 1e-10
Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 22/150 (14%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
LG G V++ + + K ++ + + RHRN++ +
Sbjct: 12 DLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHE-- 68
Query: 219 AILILKPWYLSSCVMPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVH 265
+ ++ + + D E ++ + + A ++LH S + H
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGH 125
Query: 266 CDLKPSNNLLDEDMVAHV--SDFNISKLLG 293
D++P N + + + +F ++ L
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 59.5 bits (143), Expect = 1e-10
Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRN 210
D++ LG V++ I + + V +K+ ++ + + ++ +N+R N
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKR---EIKILENLRGGPN 91
Query: 211 LIKILTTIAILILKPWYLSSCVMPNGDF---------PERLNIMIDMALAFEYLHHGRST 261
+I + + + + L + N DF + M ++ A +Y H
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG-- 149
Query: 262 PMVHCDLKPSNNLLD-EDMVAHVSDFNISKLL 292
++H D+KP N ++D E + D+ +++
Sbjct: 150 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 180
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (142), Expect = 1e-10
Identities = 24/152 (15%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
Query: 161 LGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTT 217
+G + G V+K VA+K ++ E + + ++ + ++H N++ ++
Sbjct: 18 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 77
Query: 218 IAILILKP------WYLSSCVMPNGDFPERLNIMID---------MALAFEYLHHGRSTP 262
YL + N+++ M + L++
Sbjct: 78 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 137
Query: 263 MVHCDLKPSNNLLDEDMVAHVSDFNISKLLGV 294
++H D+K +N L+ D V ++DF +++ +
Sbjct: 138 ILHRDMKAANVLITRDGVLKLADFGLARAFSL 169
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.7 bits (141), Expect = 2e-10
Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 26/165 (15%)
Query: 151 ATDEFNEWHLLGTESLGSVYKWIFLDETN--VAIKVFNLQLERAFRSFDSKCEVH----- 203
A ++ +G + G V+K L VA+K +Q + EV
Sbjct: 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64
Query: 204 KNVRHRNLIKIL---TTIAILILKPWYLSSCVMPNGDF-------------PERLNIMID 247
+ H N++++ T L + ++M
Sbjct: 65 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124
Query: 248 MALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ ++LH S +VH DLKP N L+ ++DF ++++
Sbjct: 125 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 166
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 3e-10
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 18/157 (11%)
Query: 153 DEFNEWHLLGTESLGSVYK--WIFLDETN--VAIKVFN----LQLERAFRSFDSKCEVHK 204
+ F +LGT + G V+ I +T A+KV +Q + ++ +V +
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 205 NVRHRNLIKIL---------TTIAILILKPWYLSSCVMPNGDFPERLNIMIDMALAFEYL 255
++R + L + + + L + + F E + I + L
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH-EVQIYVGEIVLAL 142
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H +++ D+K N LLD + ++DF +SK
Sbjct: 143 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 57.0 bits (137), Expect = 6e-10
Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 16/156 (10%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQ-LERAFRSFDSKCEVHKNVRHR 209
D ++ +LGT + V + VAIK + LE S +++ V ++H
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67
Query: 210 NLIKILTTIAILILKPWYLSSCVMPNGD----------FPER--LNIMIDMALAFEYLHH 257
N++ + YL ++ G+ + ER ++ + A +YLH
Sbjct: 68 NIVALDD--IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD 125
Query: 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
LDED +SDF +SK+
Sbjct: 126 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 161
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (134), Expect = 1e-09
Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 19/148 (12%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKIL- 215
+G+ + G V + NVAIK + + + + + K V H+N+I +L
Sbjct: 24 PIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 216 ---TTIAILILKPWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPM 263
+ + YL +M D ++ M ++LH +
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGI 140
Query: 264 VHCDLKPSNNLLDEDMVAHVSDFNISKL 291
+H DLKPSN ++ D + DF +++
Sbjct: 141 IHRDLKPSNIVVKSDCTLKILDFGLART 168
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.6 bits (133), Expect = 2e-09
Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 43/178 (24%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL--------DETNVAIKVFNLQL-ERAFRSFDSKCEVH 203
D LG + G V + T VA+K+ E+ S+ E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 204 KNV-RHRNLIKILTTIAILILKPWYLSSCVMPNGDF------------------------ 238
K + +H+N+I +L P Y+ G+
Sbjct: 73 KMIGKHKNIINLLGAC--TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 130
Query: 239 ----PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
+ ++ +A EYL S +H DL N L+ ED V ++DF +++ +
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.1 bits (132), Expect = 2e-09
Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 22/157 (14%)
Query: 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVR 207
++F +LG S G V+ F AIK + + + K +
Sbjct: 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 208 HRNLIKILTTIAILILKPWYLSSCVMPNGDF------------PERLNIMIDMALAFEYL 255
H L + + + + GD ++ L ++L
Sbjct: 62 HPFLTHMFC--TFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 119
Query: 256 HHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292
H +V+ DLK N LLD+D ++DF + K
Sbjct: 120 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 153
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.1 bits (129), Expect = 4e-09
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 20/149 (13%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL--- 215
+G+ S G +Y + VAIK+ ++ + + +++K ++ I +
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 216 ------TTIAILILKPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYLHHGRSTPMVHCD 267
+ + +L P + F L + M EY+H +H D
Sbjct: 72 GAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRD 128
Query: 268 LKPSN---NLLDEDMVAHVSDFNISKLLG 293
+KP N L + + ++ DF ++K
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.9 bits (129), Expect = 5e-09
Identities = 34/154 (22%), Positives = 52/154 (33%), Gaps = 24/154 (15%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR--------HRN 210
LLG+ GSVY I + D VAIK + + V V
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 211 LIKILTT---------IAILILKPWYLSSCVMPNGDFPERL--NIMIDMALAFEYLHHGR 259
+I++L I L + G E L + + A + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH--- 127
Query: 260 STPMVHCDLKPSNNLLDED-MVAHVSDFNISKLL 292
+ ++H D+K N L+D + + DF LL
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 52.1 bits (124), Expect = 9e-09
Identities = 18/153 (11%), Positives = 42/153 (27%), Gaps = 25/153 (16%)
Query: 160 LLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIA 219
L+G +V+ +K ++ + + ++ L
Sbjct: 7 LMGEGKESAVFNCYSEKFGECVVKF--HKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 220 ILILKP-------------------WYLSSCVMPNGDFPERLNIMIDMALAFEYLHHGRS 260
L+ + + + ++ + +H
Sbjct: 65 FRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH--- 121
Query: 261 TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLLG 293
+VH DL N L+ E+ + + DF S +G
Sbjct: 122 RGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEVG 153
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 1e-08
Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 27/153 (17%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTI 218
+LG G V + + A+K+ +A R + + + ++++I+
Sbjct: 19 VLGLGINGKVLQIFNKRTQEKFALKMLQ-DCPKARREVEL---HWRASQCPHIVRIVDVY 74
Query: 219 AILIL--KPWYLSSCVMPNGD------------FPER--LNIMIDMALAFEYLHHGRSTP 262
L K + + G+ F ER IM + A +YLH S
Sbjct: 75 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SIN 131
Query: 263 MVHCDLKPSNNLLD---EDMVAHVSDFNISKLL 292
+ H D+KP N L + + ++DF +K
Sbjct: 132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.0 bits (126), Expect = 2e-08
Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 20/155 (12%)
Query: 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRH 208
+ + +G+ + GSV VA+K + + + + K+++H
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 209 RNLIKIL----TTIAILILKPWYLSSCVMPNGDF----------PERLNIMIDMALAFEY 254
N+I +L ++ YL + +M ++ + +Y
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY 136
Query: 255 LHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289
+H S ++H DLKPSN ++ED + DF ++
Sbjct: 137 IH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 168
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 51.3 bits (122), Expect = 4e-08
Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 22/150 (14%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKIL--- 215
+G S G +++ L + VAIK + + + +K + I +
Sbjct: 12 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTGIPNVYYF 69
Query: 216 -----TTIAILILKPWYLSSCVMPNG---DFPERLNIMIDMALAFEYLHHGRSTPMVHCD 267
+ ++ L L + G M + +H +V+ D
Sbjct: 70 GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRD 126
Query: 268 LKPSNNLLDEDMVAH-----VSDFNISKLL 292
+KP N L+ + V DF + K
Sbjct: 127 IKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.7 bits (117), Expect = 1e-07
Identities = 27/219 (12%), Positives = 60/219 (27%), Gaps = 9/219 (4%)
Query: 31 LDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGK- 89
LDL+ L+ D+ + + + + + F S ++ +DLS++ +
Sbjct: 5 LDLTGKNLHPDVTGRLLSQG-VIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIEVST 62
Query: 90 IPKSLEALSNLKELNVSYNRLEGEIPTNV-PFGNFSSQSFISNYALCAHQDSKRTSYLDI 148
+ L S L+ L++ RL I + N + S
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122
Query: 149 LQATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRH 208
L + + +V + + +C ++
Sbjct: 123 LDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 182
Query: 209 RNLIKILTTIAILI-----LKPWYLSSCVMPNGDFPERL 242
+ + + L+ LS C + L
Sbjct: 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLEL 221
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 3e-07
Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 24/154 (15%)
Query: 160 LLGTESLGSVYKWIFL-DETNVAIKVFNLQL------ERAFRSFDSKCEVHKNVRHRNLI 212
LG+ V K A K + + + + + K ++H N+I
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 213 KILTT--------IAILILKPWYLSSCVMPNGDFPE--RLNIMIDMALAFEYLHHGRSTP 262
+ + + ++ L + E + + YLH S
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQ 133
Query: 263 MVHCDLKPSNNLLDEDMVA----HVSDFNISKLL 292
+ H DLKP N +L + V + DF ++ +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.5 bits (114), Expect = 4e-07
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 42 IPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK 101
+P + D L L N+ F++L +L L L +N +S P + L L+
Sbjct: 25 VPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLE 82
Query: 102 ELNVSYNRLEG 112
L +S N+L+
Sbjct: 83 RLYLSKNQLKE 93
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 48.1 bits (113), Expect = 5e-07
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 17 SLPSNI-QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLAS 75
+P ++ + +L DL N++ LK+L TL L N+ P +F L
Sbjct: 24 KVPKDLPPDTALL---DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVK 80
Query: 76 LEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEI 114
LE L LS N L K + L L+ ++ +
Sbjct: 81 LERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSV 119
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.0 bits (110), Expect = 1e-06
Identities = 27/156 (17%), Positives = 55/156 (35%), Gaps = 50/156 (32%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNR----- 61
++L +N ++ + +NLK L L L N++ P + L L L+L+ N+
Sbjct: 36 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 95
Query: 62 ------------------------------------------SQGSIPKSFESLASLEFL 79
S G +F+ + L ++
Sbjct: 96 EKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 155
Query: 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115
++ N++ IP+ L +L EL++ N++
Sbjct: 156 RIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDA 188
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.0 bits (92), Expect = 2e-04
Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 21 NIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80
N N +++ L + + G G+K L+ + +A +IP+ SL L
Sbjct: 121 NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PPSLTELH 177
Query: 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQDS 140
L N ++ SL+ L+NL +L +S+N + ++ + ++N L
Sbjct: 178 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGG 237
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.5 bits (114), Expect = 5e-07
Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 31/161 (19%)
Query: 159 HLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTT 217
LG +V+ + + T+VA+K+ + + + + ++ + V + K +
Sbjct: 19 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSM 77
Query: 218 IAILILKPWYLSSCVMPNG--------------------------DFPERLNIMIDMALA 251
A ILK + PNG I + L
Sbjct: 78 GANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 137
Query: 252 FEYLHHGRSTPMVHCDLKPSNNLLD-EDMVAHVSDFNISKL 291
+Y+H ++H D+KP N L++ D ++ I+ L
Sbjct: 138 LDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADL 176
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 1e-06
Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 5/70 (7%)
Query: 51 DLTTLFLAGNR-SQGSIPKSFESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNV 105
D+ +L + S + L + + L L+ I +L L ELN+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 106 SYNRLEGEIP 115
N L
Sbjct: 63 RSNELGDVGV 72
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 6e-06
Identities = 14/89 (15%), Positives = 27/89 (30%), Gaps = 12/89 (13%)
Query: 31 LDLSINRLYGDIPIT--ISGLKDLTTLFLAGNR----SQGSIPKSFESLASLEFLDLSSN 84
LD+ L D + L+ + L I + +L L+L SN
Sbjct: 7 LDIQCEEL-SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSN 65
Query: 85 NLSGKIPKSL-----EALSNLKELNVSYN 108
L + +++L++
Sbjct: 66 ELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 1e-05
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 9/73 (12%)
Query: 52 LTTLFLAGNR----SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSL-EAL----SNLKE 102
L L+LA S S+ + + SL LDLS+N L L E++ L++
Sbjct: 371 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQ 430
Query: 103 LNVSYNRLEGEIP 115
L + E+
Sbjct: 431 LVLYDIYWSEEME 443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (95), Expect = 9e-05
Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 19 PSNIQNLKVLIGLDLSINRL----YGDIPITISGLKDLTTLFLAGNRSQGSIPKSF---- 70
Q VL L L+ + + T+ L L L+ N +
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 71 -ESLASLEFLDLSSNNLSGKIPKSLEALSNLK 101
+ LE L L S ++ L+AL K
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.7 bits (109), Expect = 1e-06
Identities = 26/134 (19%), Positives = 42/134 (31%), Gaps = 25/134 (18%)
Query: 8 NLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP 67
L N+L ++L L L L NR+ GL L L L NR P
Sbjct: 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194
Query: 68 KSFESLA------------------------SLEFLDLSSNNLSGKIPKSLEALSNLKEL 103
+F L +L++L L+ N + + L++
Sbjct: 195 HAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR-ARPLWAWLQKF 253
Query: 104 NVSYNRLEGEIPTN 117
S + + +P
Sbjct: 254 RGSSSEVPCSLPQR 267
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (95), Expect = 7e-05
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 4/112 (3%)
Query: 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN 60
L + ++ L N ++ P ++L L+ L L N L ++ L+ L L L N
Sbjct: 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
Query: 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG 112
+ A L+ SS+ + +P+ L + ++ N L+G
Sbjct: 236 PWVCDCR-ARPLWAWLQKFRGSSSEVPCSLPQRL---AGRDLKRLAANDLQG 283
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 46.4 bits (108), Expect = 2e-06
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 33 LSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPK 92
+N +I L L ++ N+ +P LE L S N+L+ ++P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHLA-EVP- 320
Query: 93 SLEALSNLKELNVSYNRLEG--EIPTNVP 119
E NLK+L+V YN L +IP +V
Sbjct: 321 --ELPQNLKQLHVEYNPLREFPDIPESVE 347
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 45.6 bits (106), Expect = 4e-06
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
Query: 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRS 62
+ + N+ S + S L L++S N+L ++P + L L + N
Sbjct: 261 ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL-IELP---ALPPRLERLIASFNHL 316
Query: 63 QGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK 101
+P E +L+ L + N L + P E++ +L+
Sbjct: 317 A-EVP---ELPQNLKQLHVEYNPLR-EFPDIPESVEDLR 350
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.4 bits (99), Expect = 8e-06
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 7 INLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI 66
++L L+ +++ L ++ LDLS NRL P ++ L+ L L + +
Sbjct: 3 LHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQ--ASDNALEN 57
Query: 67 PKSFESLASLEFLDLSSNNL-SGKIPKSLEALSNLKELNVSYNRLEGE 113
+L L+ L L +N L + L + L LN+ N L E
Sbjct: 58 VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 1e-04
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 66 IPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT 116
F + LD+S + LE L L+ + + ++PT
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK---KLPT 240
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 3e-04
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 43 PITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKE 102
++ L LTTL N+ P SL +L + L +N +S P L SNL
Sbjct: 166 LTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFI 221
Query: 103 LNVS 106
+ ++
Sbjct: 222 VTLT 225
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 4e-04
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 69 SFESLASLEFLDLSSNNLSGKIPKSL-----EALSNLKELNVSYNRLEGE 113
S L+ L L N + ++L E + +L L ++ NR E
Sbjct: 268 SKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 36.8 bits (83), Expect = 0.003
Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 65 SIPKSFESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYN---RLEGEIP 115
S+ S++ + LS N + + + +++ + +L+ S R++ EIP
Sbjct: 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIP 79
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.1 bits (85), Expect = 7e-04
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYG--DIPITISGLKDLTTLFLAGNR 61
I + +S++ +L +N+ L+ L+LS NRLY D+ + +L L L+GN
Sbjct: 43 IDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNE 102
Query: 62 SQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEG-EIPTNVPF 120
+ LE L L N+LS +S ++E RL+G E+P + F
Sbjct: 103 LKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF 162
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.001
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
N L +L+ L L N+L IPK L + N
Sbjct: 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.001
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 60 NRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNR 109
R+ ++P L LS N L +L + L +LN+
Sbjct: 19 KRNLTALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE 66
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.7 bits (81), Expect = 0.002
Identities = 7/42 (16%), Positives = 13/42 (30%), Gaps = 1/42 (2%)
Query: 69 SFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRL 110
+ + LDL + I L ++ S N +
Sbjct: 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEI 53
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 34.8 bits (78), Expect = 0.004
Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 2/110 (1%)
Query: 30 GLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFES-LASLEFLDLSSNNLSG 88
GL + + D + G ++LT L++ + + L L L + + L
Sbjct: 12 GLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRF 70
Query: 89 KIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQ 138
P + L LN+S+N LE V + N C+
Sbjct: 71 VAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 312 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 99.98 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 99.98 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.98 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 99.98 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.98 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 99.98 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.97 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.97 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.97 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.97 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.97 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 99.97 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.97 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.97 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.94 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.91 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.8 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.78 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.74 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.73 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.72 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.71 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.68 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.66 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.66 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.59 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.58 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.56 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.53 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.52 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.51 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.5 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.49 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.47 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.46 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.44 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.4 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.39 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.33 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.33 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.29 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.21 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.14 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.11 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.06 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.8 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 98.75 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.7 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.66 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.62 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.6 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 98.49 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.38 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 98.36 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 98.32 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 98.29 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.96 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.62 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.58 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 97.55 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.46 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.28 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.72 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 96.29 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-37 Score=265.63 Aligned_cols=151 Identities=21% Similarity=0.367 Sum_probs=134.7
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
++|+..+.||+|+||.||+|++. +|+.||||+++.......+.+.+|++++++++|||||++++++.. ...++++||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~ivmE 97 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV--GDELWVVME 97 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEE--CCEEEEEEE
Confidence 47999999999999999999964 688999999987655556778999999999999999999999984 446789999
Q ss_pred ccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--------
Q 036266 232 VMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-------- 292 (312)
Q Consensus 232 ~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-------- 292 (312)
|+++|++.+. ..++.|++.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 98 y~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~ 174 (293)
T d1yhwa1 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (293)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred ecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence 9999976543 469999999999999 899999999999999999999999999999764
Q ss_pred ----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 218 (293)
T d1yhwa1 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (293)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCC
Confidence 9999999999999864
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-37 Score=263.50 Aligned_cols=152 Identities=22% Similarity=0.346 Sum_probs=130.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++|||||++++++.. ...++++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~--~~~~~iv 81 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE--GNIQYLF 81 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeecc--CceeEEE
Confidence 357899999999999999999975 68899999997643 3344668999999999999999999999984 4567899
Q ss_pred ecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
|||+++|+ ..+...++.|+++||+||| +++|+||||||+|||+++++.+||+|||+|+..
T Consensus 82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~ 158 (271)
T d1nvra_ 82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 158 (271)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence 99999884 4556689999999999999 899999999999999999999999999999753
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 159 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~ 208 (271)
T d1nvra_ 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208 (271)
T ss_dssp ECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred cccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCC
Confidence 8999999999999854
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-37 Score=260.19 Aligned_cols=152 Identities=25% Similarity=0.316 Sum_probs=133.7
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+++ +++.||+|++.+.. ....+.+.+|++++++++|||||++++++. +...++
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--~~~~~~ 82 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH--DATRVY 82 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE--CSSEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEE--ECCEEE
Confidence 357899999999999999999975 58899999997643 234567889999999999999999999988 455688
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+. ..++.||++||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 83 ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~ 159 (263)
T d2j4za1 83 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 159 (263)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred EEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence 99999999977554 369999999999999 899999999999999999999999999999774
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||++
T Consensus 160 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 206 (263)
T d2j4za1 160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 206 (263)
T ss_dssp CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCC
Confidence 8999999999999864
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.7e-37 Score=265.94 Aligned_cols=157 Identities=27% Similarity=0.422 Sum_probs=134.3
Q ss_pred hHHHHhhhccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 144 SYLDILQATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 144 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
++.+++...++|+..+.||+|+||.||+|++. +++.||||+++.+. ...+++.+|++++++++|||||++++++. +
T Consensus 8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~--~ 84 (287)
T d1opja_ 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT--R 84 (287)
T ss_dssp TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC--S
T ss_pred CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEe--e
Confidence 33344455678899999999999999999976 57889999997653 34567899999999999999999999987 4
Q ss_pred cccEEEEecccCCCCHH--------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccc
Q 036266 223 LKPWYLSSCVMPNGDFP--------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNI 288 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~--------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~ 288 (312)
...++++|||+++|++. .++.++.||++||+||| +++|+||||||+|||+++++.+||+|||+
T Consensus 85 ~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~ 161 (287)
T d1opja_ 85 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGL 161 (287)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCC
T ss_pred CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccc
Confidence 45678889999999554 44579999999999999 88999999999999999999999999999
Q ss_pred hhhh-------------------------------------hhhhhhhhcCCCCC
Q 036266 289 SKLL-------------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 289 a~~~-------------------------------------g~~~~e~~tg~~p~ 306 (312)
|+.. |++++|+++|..|+
T Consensus 162 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~ 216 (287)
T d1opja_ 162 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216 (287)
T ss_dssp TTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCS
T ss_pred eeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCC
Confidence 9874 89999999977664
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-37 Score=260.42 Aligned_cols=156 Identities=23% Similarity=0.348 Sum_probs=126.0
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|+||.||+|+.+ +|+.||||+++... +...+.+.+|++++++++|||||++++++.......++++
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 57999999999999999999975 68899999997643 3445678999999999999999999999876556678999
Q ss_pred ecccCCCCHHHH----------------HHHHHHHHHHHHHHhCCC--CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 230 SCVMPNGDFPER----------------LNIMIDMALAFEYLHHGR--STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 230 ~~~~~~g~~~~~----------------~~i~~~i~~~l~ylH~~~--~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
|||+++|++.+. ..++.|++.||+|||+.. ..+||||||||+|||++.++.+||+|||+|+.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 999999977543 469999999999999321 23599999999999999999999999999987
Q ss_pred h------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++||+||+.||.+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~ 216 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA 216 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCC
Confidence 4 8999999999999864
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-37 Score=262.78 Aligned_cols=151 Identities=23% Similarity=0.297 Sum_probs=133.5
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
+.|+..+.||+|+||.||+|++. +++.||||+++.......+.+.+|++++++++|||||++++++.. ...++++||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--~~~~~lvmE 89 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENNLWILIE 89 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE--TTEEEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--CCeEEEEEe
Confidence 46888999999999999999975 688899999987665666788999999999999999999999884 456788999
Q ss_pred ccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 232 VMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 232 ~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
|+++|++.+. ..++.||++||+||| +++|+||||||+|||++.++.+||+|||+|+..
T Consensus 90 y~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~ 166 (288)
T d2jfla1 90 FCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR 166 (288)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH
T ss_pred cCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCccc
Confidence 9999966543 469999999999999 899999999999999999999999999998653
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~ 217 (288)
T d2jfla1 167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE 217 (288)
T ss_dssp HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence 8899999999999865
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-37 Score=267.29 Aligned_cols=153 Identities=20% Similarity=0.257 Sum_probs=134.5
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..++|+..+.||+|+||+||+|++. +++.||+|+++... ......+.+|+.++++++|||||+++++|.. ...+++
T Consensus 4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~--~~~~~i 81 (322)
T d1s9ja_ 4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS--DGEISI 81 (322)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC--SSEEEE
T ss_pred CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEE
Confidence 4568999999999999999999975 67889999997643 3445678999999999999999999999984 456889
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCC-CCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRS-TPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~-~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
+|||+++|++.+. ..++.|+++||+||| + ++|+||||||+|||+++++.+||+|||+|+.+
T Consensus 82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 158 (322)
T d1s9ja_ 82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158 (322)
T ss_dssp EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence 9999999976554 369999999999999 6 48999999999999999999999999999875
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 159 ~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~ 205 (322)
T d1s9ja_ 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205 (322)
T ss_dssp TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999853
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-36 Score=259.59 Aligned_cols=150 Identities=21% Similarity=0.444 Sum_probs=130.8
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
...++|+..+.||+|+||.||+|++++++.||||+++... ...+.|.+|++++++++|||||++++++.. ...+++
T Consensus 10 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~---~~~~iv 85 (272)
T d1qpca_ 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPIYII 85 (272)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEE
T ss_pred cCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc---CCeEEE
Confidence 3456788999999999999999999888889999997643 334679999999999999999999998753 346889
Q ss_pred ecccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 230 SCVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 230 ~~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
|||+++|++ .++++|+.||++||+||| +++|+||||||+|||+++++.+||+|||+|+..
T Consensus 86 ~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCC
Confidence 999999954 456689999999999999 899999999999999999999999999999764
Q ss_pred ----------------------------------hhhhhhhhcCCCCC
Q 036266 293 ----------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~ 306 (312)
|++++||+||..|+
T Consensus 163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~ 210 (272)
T d1qpca_ 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210 (272)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCC
Confidence 99999999976654
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-36 Score=260.21 Aligned_cols=151 Identities=26% Similarity=0.376 Sum_probs=133.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||++++++. +...+++
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~--~~~~~~i 85 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ--DDEKLYF 85 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEE--CSSEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEE--ECCEEEE
Confidence 57999999999999999999975 68899999998643 234567899999999999999999999987 4566899
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+++|++.+. ..++.|++.||+||| +++||||||||+|||+++++.+||+|||+|+.+
T Consensus 86 vmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~ 162 (288)
T d1uu3a_ 86 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162 (288)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCC
Confidence 9999999977554 359999999999999 899999999999999999999999999999753
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 212 (288)
T d1uu3a_ 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 212 (288)
T ss_dssp -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCC
Confidence 8999999999999864
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-36 Score=260.20 Aligned_cols=151 Identities=23% Similarity=0.419 Sum_probs=129.2
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
...++|+..+.||+|+||.||+|++. ..||||+++... ....+.|.+|++++++++|||||++++++.. ..++
T Consensus 5 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~---~~~~ 79 (276)
T d1uwha_ 5 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---PQLA 79 (276)
T ss_dssp CCTTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS---SSCE
T ss_pred cccccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec---cEEE
Confidence 34567889999999999999999853 369999997542 4456789999999999999999999998652 3478
Q ss_pred EEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++|||+++|++. ++++++.||++||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~ 156 (276)
T d1uwha_ 80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156 (276)
T ss_dssp EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC---
T ss_pred EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccc
Confidence 999999988554 45579999999999999 889999999999999999999999999998653
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||++
T Consensus 157 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~ 211 (276)
T d1uwha_ 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN 211 (276)
T ss_dssp ---------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence 8888999999988865
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-35 Score=253.10 Aligned_cols=150 Identities=20% Similarity=0.251 Sum_probs=129.1
Q ss_pred ccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec--ccccEEEEe
Q 036266 156 NEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL--ILKPWYLSS 230 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~--~~~~~~l~~ 230 (312)
+..+.||+|+||+||+|++. +++.||+|.+.... ....+.+.+|++++++++|||||++++++... ....++++|
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm 91 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 91 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence 55668999999999999975 57889999997643 34556789999999999999999999998643 345689999
Q ss_pred cccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCC--ceecCCCCCCeeeC-CCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTP--MVHCDLKPSNNLLD-EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~--iiHrDlkp~Nill~-~~~~~kl~DFG~a~~~--- 292 (312)
||+++|++.+. ..++.||++||+||| +++ |+||||||+|||++ +++.+||+|||+|+..
T Consensus 92 E~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~ 168 (270)
T d1t4ha_ 92 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 168 (270)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence 99999977554 359999999999999 666 99999999999996 5789999999999874
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 169 ~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~ 214 (270)
T d1t4ha_ 169 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE 214 (270)
T ss_dssp SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence 8999999999999865
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.8e-36 Score=260.18 Aligned_cols=152 Identities=25% Similarity=0.390 Sum_probs=125.2
Q ss_pred cccccceEeccCCcEEEEEEEEcC-C---cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLD-E---TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
++|+..+.||+|+||+||+|+++. + ..||||.+.... ....+.|.+|++++++++|||||++++++.. ...++
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~--~~~~~ 103 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK--STPVM 103 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--SSSCE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee--CCEEE
Confidence 457778899999999999999752 3 258999987543 4456789999999999999999999999874 45678
Q ss_pred EEecccCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 228 LSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 228 l~~~~~~~g~-------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
++|||+++|+ +.++++++.||++||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 104 iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~ 180 (299)
T d1jpaa_ 104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 180 (299)
T ss_dssp EEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence 8999999984 4556689999999999999 899999999999999999999999999998753
Q ss_pred ---------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ---------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||.+.
T Consensus 181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~ 237 (299)
T d1jpaa_ 181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 237 (299)
T ss_dssp ---------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC
Confidence 899999998 78888653
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.2e-36 Score=260.20 Aligned_cols=152 Identities=24% Similarity=0.347 Sum_probs=134.0
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|+.++++++|||||++++++. +...++
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--~~~~~~ 80 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ--DAQQIF 80 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEE--CSSEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEe--eCCeee
Confidence 357999999999999999999975 68899999998643 234567889999999999999999999988 456789
Q ss_pred EEecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++... ..++.||+.|++||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 81 ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 81 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 99999999976544 358999999999999 899999999999999999999999999999875
Q ss_pred ------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 203 (316)
T d1fota_ 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 203 (316)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCC
Confidence 8999999999999864
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.7e-36 Score=261.14 Aligned_cols=151 Identities=23% Similarity=0.285 Sum_probs=130.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++|||||++++++.. ...+++
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--~~~~~i 92 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--EHTAWL 92 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE--CCEEEE
Confidence 35888999999999999999975 67889999997543 3445678999999999999999999999874 456889
Q ss_pred EecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+||||++|+ +.+...++.||+.||+||| +++||||||||+|||+++++.+||+|||+|+..
T Consensus 93 v~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~ 169 (309)
T d1u5ra_ 93 VMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN 169 (309)
T ss_dssp EEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred EEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCCCC
Confidence 999999884 4455679999999999999 899999999999999999999999999999864
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||.+
T Consensus 170 ~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~ 216 (309)
T d1u5ra_ 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (309)
T ss_dssp CCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCC
Confidence 7888888888888754
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-36 Score=261.55 Aligned_cols=152 Identities=23% Similarity=0.286 Sum_probs=134.8
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
.++|+..+.||+|+||.||+|+.. +++.||||++++.. ....+.+.+|+.++++++|||||++++++. +...++
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~--~~~~~~ 81 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ--THDRLC 81 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE--CSSEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec--cccccc
Confidence 467999999999999999999975 68999999998653 234567889999999999999999999998 456789
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+.+ .++.|++.||+||| +++||||||||+|||++.+|.+||+|||+|+..
T Consensus 82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 999999999876544 58999999999999 899999999999999999999999999999864
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~ 207 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCC
Confidence 9999999999999864
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-36 Score=255.69 Aligned_cols=134 Identities=25% Similarity=0.362 Sum_probs=114.8
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
++|+..+.||+|+||.||+|++.+++.||||+++... ...+++.+|++++++++|||||++++++.. ....+++|||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--~~~~~lv~E~ 81 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVFEF 81 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS--SSSCEEEEEC
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceecc--CCceEEEEEe
Confidence 5688899999999999999999888889999997643 334679999999999999999999999874 4457888999
Q ss_pred cCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 233 MPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 233 ~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
+++|++. .+++++.|+|+||+|+| +++|+||||||+|||+|+++.+||+|||+|+..
T Consensus 82 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~ 151 (263)
T d1sm2a_ 82 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 151 (263)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC-----
T ss_pred cCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheec
Confidence 9999554 44579999999999999 899999999999999999999999999999864
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=9.8e-36 Score=262.86 Aligned_cols=152 Identities=18% Similarity=0.259 Sum_probs=135.1
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.+.|+..+.||+|+||.||+|+.. +|+.||||+++.........+.+|++++++++|||||++++++. +...++++|
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~--~~~~~~ivm 105 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE--DKYEMVLIL 105 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE--CSSEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--ECCEEEEEE
Confidence 356999999999999999999975 68999999998765555677889999999999999999999988 456688999
Q ss_pred cccCCCCHHH-------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPE-------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~-------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~~~kl~DFG~a~~~--- 292 (312)
||+++|++.+ ...|+.||+.||+||| +.+||||||||+|||++ .++.+||+|||+|+.+
T Consensus 106 E~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~ 182 (352)
T d1koba_ 106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 182 (352)
T ss_dssp ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred EcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence 9999997654 3469999999999999 89999999999999998 6789999999999874
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 230 (352)
T d1koba_ 183 EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 230 (352)
T ss_dssp SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-35 Score=251.14 Aligned_cols=151 Identities=28% Similarity=0.404 Sum_probs=133.4
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
++|+..+.||+|+||.||+|++++++.||||+++... ...+++.+|+.++++++|||||++++++. +...++++|||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~--~~~~~~iv~Ey 80 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT--KQRPIFIITEY 80 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEC--CSSSEEEEEEC
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEe--eCCceEEEEEc
Confidence 5788999999999999999999888899999998653 23467999999999999999999999987 44568899999
Q ss_pred cCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 233 MPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 233 ~~~g~-------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
+++|+ +..+++++.|+++||+||| +.+|+||||||+||++++++.+||+|||+|+..
T Consensus 81 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 157 (258)
T d1k2pa_ 81 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157 (258)
T ss_dssp CTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCC
T ss_pred cCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCcee
Confidence 99884 4556689999999999999 899999999999999999999999999999753
Q ss_pred ------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||...
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~ 205 (258)
T d1k2pa_ 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 205 (258)
T ss_dssp CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCC
Confidence 999999998 78888653
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.5e-35 Score=261.42 Aligned_cols=152 Identities=21% Similarity=0.255 Sum_probs=134.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
.++|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++|||||++++++.. ...++++|
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~--~~~~~ivm 102 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFED--DNEMVMIY 102 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE--TTEEEEEE
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE--CCEEEEEE
Confidence 457999999999999999999975 688999999987665666788999999999999999999999884 55689999
Q ss_pred cccCCCCHHHH-------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC--CCCceEEccccchhhh---
Q 036266 231 CVMPNGDFPER-------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD--EDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 231 ~~~~~g~~~~~-------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~--~~~~~kl~DFG~a~~~--- 292 (312)
||+++|++.+. ..|+.||+.||+||| +++||||||||+|||++ .++.+||+|||+|+.+
T Consensus 103 E~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~ 179 (350)
T d1koaa2 103 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 179 (350)
T ss_dssp CCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred EcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence 99999977554 369999999999999 89999999999999996 4688999999999774
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 180 ~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 227 (350)
T d1koaa2 180 QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 227 (350)
T ss_dssp SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCC
Confidence 9999999999999853
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-35 Score=253.06 Aligned_cols=152 Identities=23% Similarity=0.364 Sum_probs=129.4
Q ss_pred ccccccce-EeccCCcEEEEEEEEc---CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWH-LLGTESLGSVYKWIFL---DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+++...+ .||+|+||.||+|.++ ++..||||+++... ....++|.+|++++++++|||||++++++.. ..+
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---~~~ 83 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EAL 83 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSE
T ss_pred ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc---CeE
Confidence 34566666 4999999999999864 34469999997543 4456789999999999999999999999863 247
Q ss_pred EEEecccCCCCHH-------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGDFP-------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~~~-------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++|||+++|++. ++++++.|+++||+||| +++|+||||||+||+++.++.+||+|||+|+.+
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~ 160 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 160 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence 8999999998554 45579999999999999 899999999999999999999999999999753
Q ss_pred --------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 --------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 --------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||.+.
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~ 216 (285)
T d1u59a_ 161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 216 (285)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCC
Confidence 999999998 89998764
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1e-35 Score=258.21 Aligned_cols=153 Identities=26% Similarity=0.343 Sum_probs=124.2
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
..+.|+..+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++|||||++++++. +...+++
T Consensus 7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~--~~~~~~l 84 (307)
T d1a06a_ 7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYE--SGGHLYL 84 (307)
T ss_dssp GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEE--CSSEEEE
T ss_pred CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEE--ECCEEEE
Confidence 3466999999999999999999975 68899999997654 333456789999999999999999999987 4556899
Q ss_pred EecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccchhhh-
Q 036266 229 SSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLL- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~a~~~- 292 (312)
+|||+++|++.+.+ .++.|++.||+||| +++||||||||+||+++ +++.+||+|||+|+..
T Consensus 85 vmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~ 161 (307)
T d1a06a_ 85 IMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED 161 (307)
T ss_dssp EECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred EEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence 99999999876654 59999999999999 89999999999999994 5789999999999864
Q ss_pred ----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 162 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 211 (307)
T d1a06a_ 162 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYD 211 (307)
T ss_dssp -----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-35 Score=251.37 Aligned_cols=136 Identities=26% Similarity=0.439 Sum_probs=114.3
Q ss_pred ccccccceEeccCCcEEEEEEEEcCC-----cEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLDE-----TNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
.+.|+..+.||+|+||.||+|.++.. ..||||+++... +....+|.+|++++++++|||||++++++. ....
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~--~~~~ 83 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS--KYKP 83 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC--SSSS
T ss_pred HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe--cCCc
Confidence 35688899999999999999997532 359999997543 344567899999999999999999999987 3455
Q ss_pred EEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+++|||+.+| ++.++++++.|++.|++||| +++|+||||||+|||++.++.+||+|||+|+.+
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 160 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 160 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcc
Confidence 78888899887 55667789999999999999 899999999999999999999999999999764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-35 Score=254.31 Aligned_cols=151 Identities=23% Similarity=0.366 Sum_probs=131.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|+||.||+|++. +++.||||+++... +...+.+.+|++++++++|||||++++++.. ...+|++
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~--~~~~~iv 79 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT--ENKLYLV 79 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--TTEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc--ccceeEE
Confidence 57999999999999999999974 68899999997543 2335678999999999999999999999984 4567888
Q ss_pred ecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 230 SCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 230 ~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
|||+.++ ++.+...++.|++.||+||| +++||||||||+|||++.++.+|++|||+|+..
T Consensus 80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~ 156 (298)
T d1gz8a_ 80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156 (298)
T ss_dssp EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCc
Confidence 8898765 45666789999999999999 899999999999999999999999999999875
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||++
T Consensus 157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~ 205 (298)
T d1gz8a_ 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPG 205 (298)
T ss_dssp BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCC
Confidence 9999999999999864
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.8e-35 Score=257.83 Aligned_cols=151 Identities=26% Similarity=0.350 Sum_probs=133.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l 228 (312)
++|+..+.||+|+||.||+|+++ +|+.||||++++.. ....+.+.+|++++++++|||||++++++. .....++
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~--~~~~~~~ 118 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK--DNSNLYM 118 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE--CSSEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccc--ccccccc
Confidence 57999999999999999999975 68999999997643 233466889999999999999999999987 4456788
Q ss_pred EecccCCCCHHHH------------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 229 SSCVMPNGDFPER------------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 229 ~~~~~~~g~~~~~------------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
+|||+.+|++... ..++.||+.||.||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~ 195 (350)
T d1rdqe_ 119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeeccccc
Confidence 8899999976544 469999999999999 899999999999999999999999999999875
Q ss_pred -----------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 196 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 240 (350)
T d1rdqe_ 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=8.2e-35 Score=248.85 Aligned_cols=151 Identities=25% Similarity=0.369 Sum_probs=133.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---------hHhHHHHHHHHHHhhcCC-CCceeeeeeeeeec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---------ERAFRSFDSKCEVHKNVR-HRNLIKILTTIAIL 221 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 221 (312)
++|+..+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.++++++ |||||++++++.
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 80 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE-- 80 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE--
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc--
Confidence 57899999999999999999975 68889999997532 223456889999999997 999999999998
Q ss_pred ccccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccch
Q 036266 222 ILKPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNIS 289 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a 289 (312)
+...++++|||+++|++.+.+ .++.||++||+||| +++|+||||||+||+++.++.+||+|||+|
T Consensus 81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a 157 (277)
T d1phka_ 81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 157 (277)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchhe
Confidence 556789999999999776554 59999999999999 899999999999999999999999999999
Q ss_pred hhh-----------------------------------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL-----------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~-----------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.+ |++++||+||+.||.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~ 217 (277)
T d1phka_ 158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 217 (277)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCC
Confidence 774 9999999999999875
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-35 Score=250.54 Aligned_cols=150 Identities=26% Similarity=0.472 Sum_probs=130.3
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.||+|+||.||+|++++++.||||+++... ...+.|.+|+.++++++|||||++++++.. ...+++|
T Consensus 15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~---~~~~lv~ 90 (285)
T d1fmka3 15 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVT 90 (285)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCEEEE
T ss_pred CHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEec---CCeEEEE
Confidence 346799999999999999999999888889999997553 344679999999999999999999998853 3468899
Q ss_pred cccCCC--------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNG--------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g--------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||+++| ++.+++.++.||++||+||| +.+|+||||||+|||+|+++.+||+|||+|+.+
T Consensus 91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~ 167 (285)
T d1fmka3 91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167 (285)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence 999998 45667789999999999999 889999999999999999999999999999753
Q ss_pred ---------------------------------hhhhhhhhcCCCCCc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|++||..|+.
T Consensus 168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~ 215 (285)
T d1fmka3 168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 215 (285)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCC
Confidence 899999999766653
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.2e-34 Score=257.07 Aligned_cols=152 Identities=19% Similarity=0.232 Sum_probs=129.6
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHH---HHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSF---DSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+ ..|+++++.++|||||++++++.. ..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~--~~ 80 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PD 80 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC--SS
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE--CC
Confidence 467999999999999999999975 68999999997543 1122223 344777888899999999999884 45
Q ss_pred cEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 225 PWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.+|++|||+++|++.+.+ .++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+
T Consensus 81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 157 (364)
T ss_dssp EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeec
Confidence 688999999999876544 58999999999999 899999999999999999999999999999874
Q ss_pred -----------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||.+
T Consensus 158 ~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~ 208 (364)
T d1omwa3 158 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 208 (364)
T ss_dssp SSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred CCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=250.24 Aligned_cols=152 Identities=20% Similarity=0.268 Sum_probs=132.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh------hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL------ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.+.|+..+.||+|+||.||+|+++ +|+.||||++++.. ....+.+.+|++++++++|||||++++++. +..
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~--~~~ 86 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE--NKT 86 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE--CSS
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE--ECC
Confidence 457999999999999999999975 68899999997532 123567899999999999999999999988 456
Q ss_pred cEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC----ceEEccccc
Q 036266 225 PWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM----VAHVSDFNI 288 (312)
Q Consensus 225 ~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~----~~kl~DFG~ 288 (312)
.++++||||++|++.+.+ .++.|++.||+||| +.+|+||||||+||+++.++ .+|++|||+
T Consensus 87 ~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 87 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhh
Confidence 788999999999776543 59999999999999 89999999999999998766 599999999
Q ss_pred hhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.. |++++||+||+.||.+
T Consensus 164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 218 (293)
T d1jksa_ 164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218 (293)
T ss_dssp CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCC
Confidence 8774 9999999999999864
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-34 Score=252.83 Aligned_cols=152 Identities=16% Similarity=0.269 Sum_probs=132.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
..++|...+.||+|+||+||+|.+. +++.||||+++.... ....+.+|+++|++++|||||++++++.. ...+|++
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--~~~~~lv 79 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFES--MEELVMI 79 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEE--TTEEEEE
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEE--CCEEEEE
Confidence 3567999999999999999999976 578899999986542 33567899999999999999999999984 4568999
Q ss_pred ecccCCCCHHHHH-------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC--CCceEEccccchhhh--
Q 036266 230 SCVMPNGDFPERL-------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE--DMVAHVSDFNISKLL-- 292 (312)
Q Consensus 230 ~~~~~~g~~~~~~-------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~--~~~~kl~DFG~a~~~-- 292 (312)
||||++|++.+.+ .|+.||++||+||| +.+|+||||||+|||++. ...+|++|||+|+..
T Consensus 80 mE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~ 156 (321)
T d1tkia_ 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhcccc
Confidence 9999999776544 59999999999999 899999999999999984 458999999998874
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||+.
T Consensus 157 ~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~ 205 (321)
T d1tkia_ 157 GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-34 Score=254.20 Aligned_cols=154 Identities=23% Similarity=0.356 Sum_probs=129.0
Q ss_pred hccccccceEeccCCcEEEEEEEEcC-C-----cEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD-E-----TNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILI 222 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 222 (312)
..++|+..+.||+|+||.||+|++.. + ..||+|.+.... ......+.+|+.+++++ +|||||++++++. +
T Consensus 35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~--~ 112 (325)
T d1rjba_ 35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT--L 112 (325)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC--S
T ss_pred CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe--e
Confidence 34678899999999999999999643 2 259999986543 34456789999999998 8999999999987 4
Q ss_pred cccEEEEecccCCCCHHHH-----------------------------------HHHHHHHHHHHHHHhCCCCCCceecC
Q 036266 223 LKPWYLSSCVMPNGDFPER-----------------------------------LNIMIDMALAFEYLHHGRSTPMVHCD 267 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~~-----------------------------------~~i~~~i~~~l~ylH~~~~~~iiHrD 267 (312)
...++++|||+++|++.+. +.|+.||++||+||| +++|||||
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRD 189 (325)
T d1rjba_ 113 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 189 (325)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecc
Confidence 4567889999999876543 459999999999999 89999999
Q ss_pred CCCCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 268 LKPSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 268 lkp~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|||+||+++.++.+||+|||+|+.. |++++||+| |+.||++
T Consensus 190 lKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~ 269 (325)
T d1rjba_ 190 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 269 (325)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999764 999999998 8999865
Q ss_pred c
Q 036266 309 M 309 (312)
Q Consensus 309 ~ 309 (312)
.
T Consensus 270 ~ 270 (325)
T d1rjba_ 270 I 270 (325)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=9.2e-35 Score=250.23 Aligned_cols=151 Identities=19% Similarity=0.303 Sum_probs=133.5
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|+..+.||+|+||+||+|++++++.||||+++... +...+.+.+|+.++++++|||||++++++.. ....++++
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~--~~~~~i~~ 79 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT--KKRLVLVF 79 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--SSCEEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc--CCceeEEE
Confidence 5789999999999999999999889999999997643 3335678999999999999999999999984 45677888
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
+++.++ +..+...++.||+.||+||| +.+||||||||+|||++.++.+|++|||.|...
T Consensus 80 e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~ 156 (286)
T d1ob3a_ 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK 156 (286)
T ss_dssp ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred EeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCccc
Confidence 888766 45566689999999999999 889999999999999999999999999999875
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||.+
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~ 203 (286)
T d1ob3a_ 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (286)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCC
Confidence 9999999999999864
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-34 Score=247.70 Aligned_cols=145 Identities=25% Similarity=0.416 Sum_probs=123.4
Q ss_pred eEeccCCcEEEEEEEEcC---CcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEeccc
Q 036266 159 HLLGTESLGSVYKWIFLD---ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCVM 233 (312)
Q Consensus 159 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~~ 233 (312)
+.||+|+||.||+|.+++ ++.||||+++... ....+++.+|++++++++|||||++++++.. ...+++|||+
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~---~~~~lvmE~~ 89 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVMEMA 89 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES---SSEEEEEECC
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc---CCEEEEEEcC
Confidence 479999999999998653 4579999997543 3345679999999999999999999999863 2467899999
Q ss_pred CCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---------
Q 036266 234 PNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------- 292 (312)
Q Consensus 234 ~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------- 292 (312)
++|++ .++++++.||++||+||| +++||||||||+|||++.++.+|++|||+|+.+
T Consensus 90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~ 166 (277)
T d1xbba_ 90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166 (277)
T ss_dssp TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence 99955 445579999999999999 889999999999999999999999999999753
Q ss_pred ------------------------------hhhhhhhhc-CCCCCccc
Q 036266 293 ------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 293 ------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
|++++|++| |+.||.+.
T Consensus 167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~ 214 (277)
T d1xbba_ 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214 (277)
T ss_dssp ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCC
Confidence 999999998 89998753
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.9e-34 Score=247.31 Aligned_cols=159 Identities=27% Similarity=0.389 Sum_probs=134.9
Q ss_pred HHHHhhhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeee
Q 036266 145 YLDILQATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTT 217 (312)
Q Consensus 145 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~ 217 (312)
+.+++...++|+..+.||+|+||.||+|+++ +++.||||+++... ....+++.+|++++++++||||++++++
T Consensus 5 ~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~ 84 (301)
T d1lufa_ 5 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV 84 (301)
T ss_dssp HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence 4455566788999999999999999999864 34679999997644 3445679999999999999999999999
Q ss_pred eeecccccEEEEecccCCCCHHH------------------------------------HHHHHHHHHHHHHHHhCCCCC
Q 036266 218 IAILILKPWYLSSCVMPNGDFPE------------------------------------RLNIMIDMALAFEYLHHGRST 261 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~g~~~~------------------------------------~~~i~~~i~~~l~ylH~~~~~ 261 (312)
+.. ....+++|||+++|++.+ ++.|+.|++.||+||| ++
T Consensus 85 ~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~ 159 (301)
T d1lufa_ 85 CAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ER 159 (301)
T ss_dssp ECS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HT
T ss_pred ecc--CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cC
Confidence 874 456778888999886543 4568999999999999 89
Q ss_pred CceecCCCCCCeeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhcCC
Q 036266 262 PMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFTRK 303 (312)
Q Consensus 262 ~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~tg~ 303 (312)
+||||||||+|||+|.++.+||+|||+|+.. |++++||++|.
T Consensus 160 ~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~ 239 (301)
T d1lufa_ 160 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 239 (301)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccC
Confidence 9999999999999999999999999999864 89999999986
Q ss_pred -CCCcc
Q 036266 304 -KPTIE 308 (312)
Q Consensus 304 -~p~~e 308 (312)
.|+.+
T Consensus 240 ~~p~~~ 245 (301)
T d1lufa_ 240 LQPYYG 245 (301)
T ss_dssp CCTTTT
T ss_pred CCCCCC
Confidence 45653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-34 Score=248.36 Aligned_cols=151 Identities=25% Similarity=0.338 Sum_probs=130.6
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhh-cCCCCceeeeeeeeeecccccEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHK-NVRHRNLIKILTTIAILILKPWY 227 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~niv~~~~~~~~~~~~~~~ 227 (312)
++|...+.||+|+||+||+|+.. +++.||||++++.. ....+.+..|..++. .++|||||++++++. +...+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~--~~~~~y 79 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ--TKENLF 79 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE--CSSEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEc--cCCcee
Confidence 57899999999999999999975 68889999998643 233455667777664 689999999999988 455689
Q ss_pred EEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 228 LSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 228 l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
++|||+++|++.+.+ .++.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+..
T Consensus 80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~ 156 (320)
T d1xjda_ 80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 156 (320)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccc
Confidence 999999999776554 59999999999999 889999999999999999999999999999864
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||..
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~ 205 (320)
T d1xjda_ 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 205 (320)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-34 Score=249.32 Aligned_cols=147 Identities=27% Similarity=0.306 Sum_probs=123.9
Q ss_pred cceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh-----HhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 157 EWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE-----RAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 157 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..+.||+|+||+||+|++. +++.||||+++.... ...+.+.+|+.++++++|||||++++++.. ...++++|
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~--~~~~~ivm 79 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--KSNISLVF 79 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC--TTCCEEEE
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc--CCceeehh
Confidence 3578999999999999975 688999999975431 123568899999999999999999999984 45678899
Q ss_pred cccCCCCH------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh------
Q 036266 231 CVMPNGDF------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------ 292 (312)
Q Consensus 231 ~~~~~g~~------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------ 292 (312)
||++++++ .+...++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+..
T Consensus 80 E~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~ 156 (299)
T d1ua2a_ 80 DFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156 (299)
T ss_dssp ECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred hhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence 99988743 345579999999999999 899999999999999999999999999999774
Q ss_pred -------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 -------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 -------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||..||+.
T Consensus 157 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~ 203 (299)
T d1ua2a_ 157 YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 203 (299)
T ss_dssp CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCC
Confidence 9999999999998863
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=9.6e-34 Score=242.68 Aligned_cols=154 Identities=20% Similarity=0.312 Sum_probs=133.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc--cc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--KP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~ 225 (312)
.++|+..+.||+|+||.||+|++. +++.||||+++... ......+.+|++++++++|||||++++++...+. ..
T Consensus 6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence 467999999999999999999974 68899999997543 3445678999999999999999999999875443 45
Q ss_pred EEEEecccCCCCHH------------HHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 226 WYLSSCVMPNGDFP------------ERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~------------~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+|++|||+++|++. +...++.||++||+||| +.+||||||||+|||++.++..+++|||.++..
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~ 162 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 162 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred EEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhc
Confidence 78999999998554 44579999999999999 899999999999999999999999999987542
Q ss_pred --------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||+||+.||++
T Consensus 163 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 216 (277)
T d1o6ya_ 163 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 216 (277)
T ss_dssp ----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCC
Confidence 9999999999999864
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-34 Score=243.37 Aligned_cols=152 Identities=20% Similarity=0.335 Sum_probs=124.4
Q ss_pred hccccccceEeccCCcEEEEEEEEcC----CcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccccc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD----ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 225 (312)
..++|+..+.||+|+||.||+|++.. +..||||.++... ....+.+.+|++++++++|||||++++++. ...
T Consensus 5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~---~~~ 81 (273)
T d1mp8a_ 5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT---ENP 81 (273)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC---SSS
T ss_pred CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---cCe
Confidence 34679999999999999999998743 3458999986543 444567999999999999999999999985 245
Q ss_pred EEEEecccCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 226 WYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 226 ~~l~~~~~~~g~-------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
++++|||+++|+ +.+++.++.||++||+||| +++||||||||+||+++.++.+||+|||+|+..
T Consensus 82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~ 158 (273)
T d1mp8a_ 82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 158 (273)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheec
Confidence 789999999884 4455679999999999999 899999999999999999999999999999864
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++||+| |..|+..
T Consensus 159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~ 212 (273)
T d1mp8a_ 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212 (273)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCC
Confidence 999999988 7888764
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-34 Score=244.29 Aligned_cols=152 Identities=26% Similarity=0.403 Sum_probs=123.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc--CC--cEEEEEEeehhh---hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL--DE--TNVAIKVFNLQL---ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 224 (312)
.++|+..+.||+|+||.||+|++. ++ ..||||+++... ....++|.+|++++++++|||||++++++.. .
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~---~ 83 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---P 83 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---S
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee---c
Confidence 356899999999999999999864 23 358999987543 3445779999999999999999999999863 2
Q ss_pred cEEEEecccCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 225 PWYLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 225 ~~~l~~~~~~~g~-------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..+++|||+++|+ +..+++++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.
T Consensus 84 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~ 160 (273)
T d1u46a_ 84 PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160 (273)
T ss_dssp SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhh
Confidence 4678899999984 4455679999999999999 89999999999999999999999999999886
Q ss_pred h---------------------------------------hhhhhhhhc-CCCCCccc
Q 036266 292 L---------------------------------------GVLLPETFT-RKKPTIEM 309 (312)
Q Consensus 292 ~---------------------------------------g~~~~e~~t-g~~p~~e~ 309 (312)
. |++++||+| |+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~ 218 (273)
T d1u46a_ 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGL 218 (273)
T ss_dssp CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCc
Confidence 3 999999998 89998653
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-33 Score=246.16 Aligned_cols=150 Identities=28% Similarity=0.394 Sum_probs=125.2
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCc----EEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DET----NVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 226 (312)
.+|+..+.||+|+||.||+|.+. +|+ .||+|.++... ....+++.+|++++++++|||||++++++... ..
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---~~ 85 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---TV 85 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS---SE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---Ce
Confidence 46999999999999999999975 343 58999886533 34567899999999999999999999998743 35
Q ss_pred EEEecccCCCC-------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 227 YLSSCVMPNGD-------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 227 ~l~~~~~~~g~-------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
+++++++.+|+ +..+++++.||++||+||| +++||||||||+|||++.++.+||+|||+|+..
T Consensus 86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 162 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 162 (317)
T ss_dssp EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecc
Confidence 66677888874 4456679999999999999 889999999999999999999999999999874
Q ss_pred -------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++||+| |+.|+++
T Consensus 163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~ 216 (317)
T d1xkka_ 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 216 (317)
T ss_dssp TTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCC
Confidence 899999998 7888765
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-33 Score=242.19 Aligned_cols=154 Identities=27% Similarity=0.380 Sum_probs=131.4
Q ss_pred hhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI 222 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 222 (312)
...++|+..+.||+|+||.||+|.+. +++.||||+++... ......+.+|++++++++|||||++++++. .
T Consensus 17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--~ 94 (308)
T d1p4oa_ 17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--Q 94 (308)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC--S
T ss_pred ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe--c
Confidence 44578889999999999999999863 24679999997543 445567899999999999999999999987 3
Q ss_pred cccEEEEecccCCCCHHH----------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCc
Q 036266 223 LKPWYLSSCVMPNGDFPE----------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMV 280 (312)
Q Consensus 223 ~~~~~l~~~~~~~g~~~~----------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~ 280 (312)
....+++|||+++|++.. +++++.|+++||.||| +++|+||||||+|||+|+++.
T Consensus 95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~ 171 (308)
T d1p4oa_ 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFT 171 (308)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCC
T ss_pred CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCce
Confidence 446788899999996544 4569999999999999 889999999999999999999
Q ss_pred eEEccccchhhh--------------------------------------hhhhhhhhcCC-CCCcc
Q 036266 281 AHVSDFNISKLL--------------------------------------GVLLPETFTRK-KPTIE 308 (312)
Q Consensus 281 ~kl~DFG~a~~~--------------------------------------g~~~~e~~tg~-~p~~e 308 (312)
+||+|||+|+.. |++++||+||. .|+++
T Consensus 172 ~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~ 238 (308)
T d1p4oa_ 172 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 238 (308)
T ss_dssp EEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred EEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCC
Confidence 999999999864 89999999985 56654
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-33 Score=237.15 Aligned_cols=151 Identities=29% Similarity=0.431 Sum_probs=125.9
Q ss_pred hccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEe
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~ 230 (312)
..++|+..+.||+|+||.||+|++ .|+.||||+++.+ ...+.+.+|++++++++|||||++++++... ...++++|
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~~~~~lv~ 80 (262)
T d1byga_ 5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVT 80 (262)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCEEEE
T ss_pred CHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEec-CCcEEEEE
Confidence 456788899999999999999998 5778999999754 3446789999999999999999999988532 34478999
Q ss_pred cccCCCCH--------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh----
Q 036266 231 CVMPNGDF--------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 231 ~~~~~g~~--------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~---- 292 (312)
||+++|++ ..+++|+.||+.|++||| +.+|+||||||+||+++.++.+|++|||+++..
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~ 157 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 157 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCC
Confidence 99999954 445579999999999999 889999999999999999999999999999884
Q ss_pred -----------------------------hhhhhhhhc-CCCCCcc
Q 036266 293 -----------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 293 -----------------------------g~~~~e~~t-g~~p~~e 308 (312)
|++++||+| |+.|+..
T Consensus 158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~ 203 (262)
T d1byga_ 158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 203 (262)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCC
Confidence 999999998 5766654
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-33 Score=248.07 Aligned_cols=148 Identities=23% Similarity=0.268 Sum_probs=127.0
Q ss_pred ccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----ccccEEE
Q 036266 154 EFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILKPWYL 228 (312)
Q Consensus 154 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~~~~l 228 (312)
+|+..+.||+|+||+||+|++. +++.||||++..... ...+|++++++++|||||+++++|... +..++++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 6888899999999999999975 688999999976432 234799999999999999999998542 3456889
Q ss_pred EecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC-ceEEccccchhhh
Q 036266 229 SSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM-VAHVSDFNISKLL 292 (312)
Q Consensus 229 ~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~-~~kl~DFG~a~~~ 292 (312)
+|||++++ ++.+...++.||++||+||| +++|+||||||+|||++.++ .+||+|||+|+..
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~ 173 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence 99999876 33445579999999999999 89999999999999999765 8999999998764
Q ss_pred ------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|+++|+.||+.
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~ 225 (350)
T d1q5ka_ 174 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225 (350)
T ss_dssp CTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCC
Confidence 9999999999999864
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-33 Score=244.58 Aligned_cols=149 Identities=21% Similarity=0.319 Sum_probs=126.6
Q ss_pred ccccccce-EeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhc-CCCCceeeeeeeeee--cccccE
Q 036266 152 TDEFNEWH-LLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKN-VRHRNLIKILTTIAI--LILKPW 226 (312)
Q Consensus 152 ~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~--~~~~~~ 226 (312)
.++|.+.. .||+|+||.||+|++. +++.||||+++.. ..+.+|++++.+ .+|||||+++++|.. .....+
T Consensus 10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-----~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~ 84 (335)
T d2ozaa1 10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 84 (335)
T ss_dssp GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence 35787764 6999999999999974 6889999999743 346779988755 489999999999864 235678
Q ss_pred EEEecccCCCCHHHHH--------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC---CCceEEccccch
Q 036266 227 YLSSCVMPNGDFPERL--------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE---DMVAHVSDFNIS 289 (312)
Q Consensus 227 ~l~~~~~~~g~~~~~~--------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~---~~~~kl~DFG~a 289 (312)
|++||||++|++.+.+ .|+.|++.||+||| +.+|+||||||+|||+++ ++.+||+|||+|
T Consensus 85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccccee
Confidence 9999999999776554 59999999999999 899999999999999985 567999999999
Q ss_pred hhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 290 KLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 290 ~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+.. |++++||+||+.||++
T Consensus 162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~ 215 (335)
T d2ozaa1 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 215 (335)
T ss_dssp EECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEE
T ss_pred eeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCC
Confidence 864 9999999999999864
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-33 Score=240.25 Aligned_cols=152 Identities=22% Similarity=0.210 Sum_probs=127.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhh------HhHHHHHHHHHHhhcCC--CCceeeeeeeeeecc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLE------RAFRSFDSKCEVHKNVR--HRNLIKILTTIAILI 222 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~ 222 (312)
.++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++++++ |||||++++++..
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~-- 80 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-- 80 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC--
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee--
Confidence 357999999999999999999975 688999999976431 12234678999999986 8999999999884
Q ss_pred cccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-CCceEEccccc
Q 036266 223 LKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-DMVAHVSDFNI 288 (312)
Q Consensus 223 ~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-~~~~kl~DFG~ 288 (312)
....+++|||+.++ +..+...++.|+++||+||| +++|+||||||+|||++. ++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~ 157 (273)
T d1xwsa_ 81 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 157 (273)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECcccc
Confidence 45678888898763 33445579999999999999 899999999999999985 57999999999
Q ss_pred hhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 289 SKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 289 a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
|+.. |++++||+||+.||..
T Consensus 158 a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~ 212 (273)
T d1xwsa_ 158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212 (273)
T ss_dssp CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred ceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence 9764 9999999999999864
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-32 Score=238.89 Aligned_cols=147 Identities=27% Similarity=0.384 Sum_probs=125.2
Q ss_pred ceEeccCCcEEEEEEEEcCC----cEEEEEEeehh-hhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEecc
Q 036266 158 WHLLGTESLGSVYKWIFLDE----TNVAIKVFNLQ-LERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSCV 232 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~~ 232 (312)
.+.||+|+||+||+|++.++ ..||||+++.. .....++|.+|++++++++|||||++++++... ....+++|||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~~~~~lv~E~ 110 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPLVVLPY 110 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET-TTEEEEEEEC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec-CCceEEEEEE
Confidence 46899999999999997532 25899999753 355567899999999999999999999987643 3357889999
Q ss_pred cCCCCH-------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-------
Q 036266 233 MPNGDF-------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL------- 292 (312)
Q Consensus 233 ~~~g~~-------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~------- 292 (312)
+++|++ ..+++++.|++.||.|+| +++|+||||||+|||+|+++.+||+|||+++..
T Consensus 111 ~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~ 187 (311)
T d1r0pa_ 111 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 187 (311)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC
T ss_pred eecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhcccccccc
Confidence 999854 445689999999999999 899999999999999999999999999999763
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||..|+..
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~ 236 (311)
T d1r0pa_ 188 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236 (311)
T ss_dssp TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred ceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCC
Confidence 8999999998887653
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.6e-32 Score=236.74 Aligned_cols=149 Identities=19% Similarity=0.281 Sum_probs=130.3
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEE
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~ 229 (312)
++|+..+.||+|+||+||+|++. +++.||||+++... .....++.+|+.++++++||||+++++++.. ....+++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~--~~~~~iv 79 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS--DKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--SSEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc--ccceeEE
Confidence 57999999999999999999975 67889999997543 3456778999999999999999999999984 4456777
Q ss_pred ecccCCCC------------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-----
Q 036266 230 SCVMPNGD------------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL----- 292 (312)
Q Consensus 230 ~~~~~~g~------------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~----- 292 (312)
++++.+++ ......++.|+++||+||| +++||||||||+|||++.++.+|++|||.|+..
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~ 156 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR 156 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS
T ss_pred eeeccccccccccccccccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCc
Confidence 77887663 4455679999999999999 899999999999999999999999999999874
Q ss_pred --------------------------------hhhhhhhhcCCCCC
Q 036266 293 --------------------------------GVLLPETFTRKKPT 306 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~ 306 (312)
|++++||++|+.|+
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 202 (292)
T d1unla_ 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCC
Confidence 99999999999986
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=9.8e-33 Score=243.57 Aligned_cols=154 Identities=22% Similarity=0.313 Sum_probs=126.6
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc---cc
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL---KP 225 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 225 (312)
...+|+..+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+++|++++||||+++++++..... ..
T Consensus 6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 3457999999999999999999964 78999999997543 4456678999999999999999999999865432 23
Q ss_pred EEEEecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
+++ ++++.+|++.+. ..++.|+++||+||| +++||||||||+|||+++++.+||+|||+|+..
T Consensus 86 ~~l-~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~ 161 (345)
T d1pmea_ 86 VYL-VTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161 (345)
T ss_dssp EEE-EEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEE-EEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence 444 456667766554 469999999999999 899999999999999999999999999998753
Q ss_pred --------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||..
T Consensus 162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~ 215 (345)
T d1pmea_ 162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 215 (345)
T ss_dssp GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCC
Confidence 9999999999999853
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=2.3e-32 Score=236.77 Aligned_cols=138 Identities=18% Similarity=0.240 Sum_probs=112.1
Q ss_pred cccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeeccc--ccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILIL--KPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--~~~~l~~ 230 (312)
.+|...+.||+|+||.||+|++ +|+.||||+++..... ......|+..+++++|||||++++++..... ..++++|
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~~-~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~ 80 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-HHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEE
Confidence 4567788999999999999986 6789999999765322 1223345566678899999999999875432 4688999
Q ss_pred cccCCCCH-----------HHHHHHHHHHHHHHHHHhCC-----CCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 231 CVMPNGDF-----------PERLNIMIDMALAFEYLHHG-----RSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 231 ~~~~~g~~-----------~~~~~i~~~i~~~l~ylH~~-----~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
||+++|++ .++++++.|+|.|++|+|+. .+++||||||||+|||+++++.+||+|||+++..
T Consensus 81 Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~ 158 (303)
T d1vjya_ 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccc
Confidence 99999954 55568999999999999942 2379999999999999999999999999987653
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.2e-32 Score=243.12 Aligned_cols=155 Identities=22% Similarity=0.310 Sum_probs=127.7
Q ss_pred hccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc----c
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI----L 223 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~----~ 223 (312)
..++|+..+.||+|+||+||+|.+. +|+.||||+++... +...+.+.+|+++|++++|||||+++++|.... .
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence 3568999999999999999999975 68999999997532 345667899999999999999999999986543 3
Q ss_pred ccEEEEecccCCC----------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh-
Q 036266 224 KPWYLSSCVMPNG----------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL- 292 (312)
Q Consensus 224 ~~~~l~~~~~~~g----------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~- 292 (312)
..++++|||++.. +......++.|++.||+||| +++||||||||+|||++.++.+|++|||+|+..
T Consensus 96 ~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 96 TDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred ceEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccC
Confidence 3578999998432 45566689999999999999 899999999999999999999999999999874
Q ss_pred ---------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ---------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ---------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|++|+.+
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~ 221 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 221 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCC
Confidence 9999999999999864
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.98 E-value=2.2e-32 Score=239.79 Aligned_cols=150 Identities=21% Similarity=0.338 Sum_probs=130.4
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEEE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYLS 229 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l~ 229 (312)
.++|+..+.||+|+||+||+|+.. +++.||||+++... .+++.+|+++|++++ ||||+++++++.......++++
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v 110 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence 357999999999999999999975 68889999997542 356789999999995 9999999999987677789999
Q ss_pred ecccCCCC---------HHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC-CceEEccccchhhh-------
Q 036266 230 SCVMPNGD---------FPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED-MVAHVSDFNISKLL------- 292 (312)
Q Consensus 230 ~~~~~~g~---------~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~-~~~kl~DFG~a~~~------- 292 (312)
|||+++++ ..+...++.||+.||+||| +++||||||||+|||++.+ +.+|++|||+|+..
T Consensus 111 ~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~ 187 (328)
T d3bqca1 111 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 187 (328)
T ss_dssp EECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC
T ss_pred EeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCCccc
Confidence 99999884 4556689999999999999 8999999999999999865 46999999999764
Q ss_pred -----------------------------hhhhhhhhcCCCCCc
Q 036266 293 -----------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 -----------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.|+.
T Consensus 188 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~ 231 (328)
T d3bqca1 188 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 231 (328)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCC
Confidence 788888888888874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.3e-32 Score=238.83 Aligned_cols=155 Identities=23% Similarity=0.315 Sum_probs=128.8
Q ss_pred hccccccceEeccCCcEEEEEEEEc-C-CcEEEEEEeehhh--hHhHHHHHHHHHHhhcC---CCCceeeeeeeeeec--
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFL-D-ETNVAIKVFNLQL--ERAFRSFDSKCEVHKNV---RHRNLIKILTTIAIL-- 221 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~-- 221 (312)
..++|++.+.||+|+||+||+|++. + ++.||||+++... ......+.+|+.+++.+ +||||+++++++...
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 4578999999999999999999974 4 5669999997543 22233466777776665 799999999988532
Q ss_pred -ccccEEEEecccCCC-------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEcccc
Q 036266 222 -ILKPWYLSSCVMPNG-------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFN 287 (312)
Q Consensus 222 -~~~~~~l~~~~~~~g-------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG 287 (312)
....++++||+++++ +......++.|++.||+||| +++||||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg 161 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 161 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchh
Confidence 345788999999887 34455679999999999999 8999999999999999999999999999
Q ss_pred chhhh-----------------------------------hhhhhhhhcCCCCCcc
Q 036266 288 ISKLL-----------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 288 ~a~~~-----------------------------------g~~~~e~~tg~~p~~e 308 (312)
+++.. |++++||+||+.||+.
T Consensus 162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~ 217 (305)
T d1blxa_ 162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 217 (305)
T ss_dssp SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCC
Confidence 98763 9999999999999864
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=2.3e-32 Score=238.61 Aligned_cols=154 Identities=19% Similarity=0.307 Sum_probs=128.9
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc------
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI------ 222 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 222 (312)
.++|+..+.||+|+||+||+|++. +|+.||||++.... +...+++.+|++++++++||||+++++++....
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 478999999999999999999975 68999999986543 334567889999999999999999999875422
Q ss_pred cccEEEEecccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchh
Q 036266 223 LKPWYLSSCVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISK 290 (312)
Q Consensus 223 ~~~~~l~~~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~ 290 (312)
...++++|||+..+ +..+...++.|++.||+||| +++|+||||||+|||++.++.+|++|||+|+
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~ 165 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 165 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceee
Confidence 34578999999866 34556689999999999999 8999999999999999999999999999986
Q ss_pred hh-----------------------------------------hhhhhhhhcCCCCCcc
Q 036266 291 LL-----------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 291 ~~-----------------------------------------g~~~~e~~tg~~p~~e 308 (312)
.+ |++++|+++|+.||.+
T Consensus 166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~ 224 (318)
T d3blha1 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 224 (318)
T ss_dssp ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCC
Confidence 43 8999999999999864
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.4e-32 Score=236.42 Aligned_cols=152 Identities=27% Similarity=0.384 Sum_probs=126.9
Q ss_pred ccccccceEeccCCcEEEEEEEEcC-Cc--EEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeecccccE
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFLD-ET--NVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAILILKPW 226 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 226 (312)
.++|+..+.||+|+||.||+|++++ +. .||||.++... ....+.+.+|+++++++ +|||||++++++. ....+
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--~~~~~ 86 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE--HRGYL 86 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE--ETTEE
T ss_pred HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEe--cCCee
Confidence 4678889999999999999999753 44 47888886432 44567799999999998 7999999999988 45568
Q ss_pred EEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCC
Q 036266 227 YLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDED 278 (312)
Q Consensus 227 ~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~ 278 (312)
+++|||+++|++.+ +.+++.||++|+.|+| +++|+||||||+|||++.+
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~ 163 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGEN 163 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGG
T ss_pred EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCC
Confidence 99999999986654 4468999999999999 8999999999999999999
Q ss_pred CceEEccccchhhh-----------------------------------hhhhhhhhcCCC-CCcc
Q 036266 279 MVAHVSDFNISKLL-----------------------------------GVLLPETFTRKK-PTIE 308 (312)
Q Consensus 279 ~~~kl~DFG~a~~~-----------------------------------g~~~~e~~tg~~-p~~e 308 (312)
+.+||+|||+|+.. |++++||++|.. |+.+
T Consensus 164 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~ 229 (309)
T d1fvra_ 164 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 229 (309)
T ss_dssp GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCC
Confidence 99999999998764 999999999754 5643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=8e-32 Score=234.31 Aligned_cols=138 Identities=20% Similarity=0.287 Sum_probs=118.1
Q ss_pred hhccccccceEeccCCcEEEEEEEEc------CCcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFL------DETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
...++|+..+.||+|+||.||+|++. +++.||||+++... ......+.+|+.+++++ +|||||++++++..
T Consensus 20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~- 98 (311)
T d1t46a_ 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI- 98 (311)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee-
Confidence 34578889999999999999999853 34579999997644 34556789999999999 69999999999874
Q ss_pred ccccEEEEecccCCCCH------------------------------HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCC
Q 036266 222 ILKPWYLSSCVMPNGDF------------------------------PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPS 271 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~------------------------------~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~ 271 (312)
....+++|||+++|++ .++++++.||++|++||| +++||||||||+
T Consensus 99 -~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~ 174 (311)
T d1t46a_ 99 -GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (311)
T ss_dssp -SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred -CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccccc
Confidence 4557889999998854 345569999999999999 899999999999
Q ss_pred CeeeCCCCceEEccccchhhh
Q 036266 272 NNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 272 Nill~~~~~~kl~DFG~a~~~ 292 (312)
||+++.++.+|++|||+++..
T Consensus 175 NIl~~~~~~~ki~DfG~~~~~ 195 (311)
T d1t46a_ 175 NILLTHGRITKICDFGLARDI 195 (311)
T ss_dssp GEEEETTTEEEECCCGGGSCT
T ss_pred cccccccCcccccccchheec
Confidence 999999999999999999864
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.2e-32 Score=234.33 Aligned_cols=139 Identities=21% Similarity=0.286 Sum_probs=107.7
Q ss_pred hhccccccceEeccCCcEEEEEEEEcC------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeeec
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLD------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAIL 221 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 221 (312)
...++|+..+.||+|+||.||+|.+.. ++.||||+++... ....+.+.+|...+.++ +|+|||.+++++...
T Consensus 10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 345789999999999999999998642 3579999997543 34456678888888776 689999999887543
Q ss_pred ccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCCe
Q 036266 222 ILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNN 273 (312)
Q Consensus 222 ~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Ni 273 (312)
...++++|||+++|++.+ ++.++.||++||+||| +++||||||||+||
T Consensus 90 -~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NI 165 (299)
T d1ywna1 90 -GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNI 165 (299)
T ss_dssp -TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGE
T ss_pred -CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccce
Confidence 345788999999986654 4468999999999999 89999999999999
Q ss_pred eeCCCCceEEccccchhhh
Q 036266 274 LLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 274 ll~~~~~~kl~DFG~a~~~ 292 (312)
|+++++.+||+|||+|+..
T Consensus 166 Ll~~~~~~Kl~DFGla~~~ 184 (299)
T d1ywna1 166 LLSEKNVVKICDFGLARDI 184 (299)
T ss_dssp EECGGGCEEECC------C
T ss_pred eECCCCcEEEccCcchhhc
Confidence 9999999999999999753
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.6e-32 Score=239.59 Aligned_cols=151 Identities=24% Similarity=0.304 Sum_probs=131.1
Q ss_pred cccccceEeccCCcEEEEEEEEc----CCcEEEEEEeehhh----hHhHHHHHHHHHHhhcCCC-Cceeeeeeeeeeccc
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL----DETNVAIKVFNLQL----ERAFRSFDSKCEVHKNVRH-RNLIKILTTIAILIL 223 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~ 223 (312)
++|+..+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|++++++++| |||+++++++.. .
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~--~ 101 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--E 101 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE--T
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc--C
Confidence 66999999999999999999852 47889999986532 2334567899999999977 899999999874 4
Q ss_pred ccEEEEecccCCCCHHHHH------------HHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 224 KPWYLSSCVMPNGDFPERL------------NIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 224 ~~~~l~~~~~~~g~~~~~~------------~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..++++|||+.+|++.+.+ .++.|++.|++|+| +++|+||||||+||+++.++.+||+|||+|+.
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhh
Confidence 5678889999999876654 58999999999999 89999999999999999999999999999876
Q ss_pred h---------------------------------------hhhhhhhhcCCCCCcc
Q 036266 292 L---------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 292 ~---------------------------------------g~~~~e~~tg~~p~~e 308 (312)
+ |++++||+||+.||..
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~ 234 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 234 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 4 9999999999999854
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=9.3e-32 Score=232.62 Aligned_cols=153 Identities=29% Similarity=0.407 Sum_probs=125.2
Q ss_pred hccccccceEeccCCcEEEEEEEEcC--------CcEEEEEEeehhh-hHhHHHHHHHHHHhhcC-CCCceeeeeeeeee
Q 036266 151 ATDEFNEWHLLGTESLGSVYKWIFLD--------ETNVAIKVFNLQL-ERAFRSFDSKCEVHKNV-RHRNLIKILTTIAI 220 (312)
Q Consensus 151 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 220 (312)
..++|...+.||+|+||.||+|+... +..||||+++.+. .....++.+|...+.++ +|||||++++++..
T Consensus 11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 45688899999999999999998532 2369999997654 34557788899988888 79999999999974
Q ss_pred cccccEEEEecccCCCCHHH----------------------------HHHHHHHHHHHHHHHhCCCCCCceecCCCCCC
Q 036266 221 LILKPWYLSSCVMPNGDFPE----------------------------RLNIMIDMALAFEYLHHGRSTPMVHCDLKPSN 272 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g~~~~----------------------------~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~N 272 (312)
....+++|||+++|++.+ +++++.|++.||+||| +.+||||||||+|
T Consensus 91 --~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~N 165 (299)
T d1fgka_ 91 --DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN 165 (299)
T ss_dssp --SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred --CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccc
Confidence 456888999999985544 4579999999999999 8999999999999
Q ss_pred eeeCCCCceEEccccchhhh--------------------------------------hhhhhhhhc-CCCCCcc
Q 036266 273 NLLDEDMVAHVSDFNISKLL--------------------------------------GVLLPETFT-RKKPTIE 308 (312)
Q Consensus 273 ill~~~~~~kl~DFG~a~~~--------------------------------------g~~~~e~~t-g~~p~~e 308 (312)
||++.++.+||+|||+++.. |++++||+| |..|+++
T Consensus 166 iLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~ 240 (299)
T d1fgka_ 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240 (299)
T ss_dssp EEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred eeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCC
Confidence 99999999999999998864 899999998 6777764
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.5e-31 Score=236.39 Aligned_cols=154 Identities=19% Similarity=0.270 Sum_probs=126.5
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeecc---ccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAILI---LKP 225 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---~~~ 225 (312)
.++|+..+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.... ...
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~ 96 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 96 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence 567999999999999999999975 68899999997543 344567889999999999999999999885432 223
Q ss_pred EEEEecccCCCCHHHH-----------HHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh--
Q 036266 226 WYLSSCVMPNGDFPER-----------LNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL-- 292 (312)
Q Consensus 226 ~~l~~~~~~~g~~~~~-----------~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~-- 292 (312)
.+++++++.+|++.+. ..++.||+.||+||| +++|+||||||+|||++.++.+|++|||+|...
T Consensus 97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccCc
Confidence 3445567778866544 469999999999999 899999999999999999999999999998764
Q ss_pred --------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 --------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++||++|+.||+.
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~ 221 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCC
Confidence 9999999999999853
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=3.5e-31 Score=234.39 Aligned_cols=153 Identities=23% Similarity=0.312 Sum_probs=129.3
Q ss_pred ccccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhh--hHhHHHHHHHHHHhhcCCCCceeeeeeeeeec----ccc
Q 036266 152 TDEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQL--ERAFRSFDSKCEVHKNVRHRNLIKILTTIAIL----ILK 224 (312)
Q Consensus 152 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~----~~~ 224 (312)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ......+.+|+.++++++|||||+++++|... ...
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 367999999999999999999976 68899999997543 34456788999999999999999999998643 346
Q ss_pred cEEEEecccCCC---------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh---
Q 036266 225 PWYLSSCVMPNG---------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL--- 292 (312)
Q Consensus 225 ~~~l~~~~~~~g---------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~--- 292 (312)
.+|++|||+.++ +..+...++.|++.||+||| +++|+||||||+|||++.++.+|++|||+++..
T Consensus 96 ~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred eeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhccccc
Confidence 789999999876 44566689999999999999 899999999999999999999999999987774
Q ss_pred --------------------------------hhhhhhhhcCCCCCc
Q 036266 293 --------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 293 --------------------------------g~~~~e~~tg~~p~~ 307 (312)
|++++|+++|+.||+
T Consensus 173 ~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~ 219 (355)
T d2b1pa1 173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_dssp --------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCC
Confidence 999999999999985
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.97 E-value=1.5e-30 Score=225.07 Aligned_cols=151 Identities=19% Similarity=0.212 Sum_probs=124.8
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCceeeeeeeeeecccccEEEEec
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNLIKILTTIAILILKPWYLSSC 231 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~l~~~ 231 (312)
++|+..+.||+|+||.||+|++. +++.||||++..... ..++.+|++++++++|+|++..+..+.. .....+++||
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~-~~~~~~ivme 83 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGA-EGDYNVMVME 83 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEE-ETTEEEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEe-cCCEEEEEEE
Confidence 46999999999999999999975 578899999876432 2457889999999998877766655543 3455778888
Q ss_pred ccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeC---CCCceEEccccchhhh----
Q 036266 232 VMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLD---EDMVAHVSDFNISKLL---- 292 (312)
Q Consensus 232 ~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~---~~~~~kl~DFG~a~~~---- 292 (312)
|++++ +....+.++.|++.||+||| +++||||||||+|||++ .+..+|++|||+|+.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 84 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred EcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccc
Confidence 98665 55667789999999999999 89999999999999975 4567999999999753
Q ss_pred ---------------------------------------hhhhhhhhcCCCCCccc
Q 036266 293 ---------------------------------------GVLLPETFTRKKPTIEM 309 (312)
Q Consensus 293 ---------------------------------------g~~~~e~~tg~~p~~e~ 309 (312)
|++++|++||+.||.+.
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~ 216 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 216 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred cccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCccccc
Confidence 99999999999998653
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=2.7e-30 Score=222.75 Aligned_cols=149 Identities=16% Similarity=0.131 Sum_probs=123.9
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCC-CceeeeeeeeeecccccEEEEe
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVRH-RNLIKILTTIAILILKPWYLSS 230 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~l~~ 230 (312)
++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+|++.++.++| +|++.+++++. .....+++|
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~--~~~~~~~vm 80 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ--EGLHNVLVI 80 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE--ETTEEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEee--cCCccEEEE
Confidence 57899999999999999999975 68889999986543 22456788889988875 89999998876 345567888
Q ss_pred cccCCC------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCC-----CCceEEccccchhhh-
Q 036266 231 CVMPNG------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDE-----DMVAHVSDFNISKLL- 292 (312)
Q Consensus 231 ~~~~~g------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~-----~~~~kl~DFG~a~~~- 292 (312)
||+.+. +..+...++.|++.||+||| +.+||||||||+||+++. ++.+|++|||+|+.+
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~ 157 (293)
T d1csna_ 81 DLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 157 (293)
T ss_dssp ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred EecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence 888432 34455679999999999999 999999999999999974 578999999999752
Q ss_pred ------------------------------------------hhhhhhhhcCCCCCcc
Q 036266 293 ------------------------------------------GVLLPETFTRKKPTIE 308 (312)
Q Consensus 293 ------------------------------------------g~~~~e~~tg~~p~~e 308 (312)
|++++|++||+.||+.
T Consensus 158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~ 215 (293)
T d1csna_ 158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 215 (293)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCC
Confidence 9999999999999864
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=4.9e-27 Score=208.13 Aligned_cols=152 Identities=16% Similarity=0.169 Sum_probs=120.7
Q ss_pred cccccceEeccCCcEEEEEEEEc-CCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-----------CCceeeeeeeeee
Q 036266 153 DEFNEWHLLGTESLGSVYKWIFL-DETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-----------HRNLIKILTTIAI 220 (312)
Q Consensus 153 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~~~~ 220 (312)
.+|++.+.||+|+||+||+|+.. +|+.||||+++.+. ...+.+.+|+.++++++ |+||+++++++..
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~ 91 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 91 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence 35899999999999999999975 68899999998653 23456778888887775 5789999988865
Q ss_pred cccccEEEEecccCCC---------------CHHHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCC------
Q 036266 221 LILKPWYLSSCVMPNG---------------DFPERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDM------ 279 (312)
Q Consensus 221 ~~~~~~~l~~~~~~~g---------------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~------ 279 (312)
......+++++++..+ +......++.|++.|++|||+ ..+|+||||||+|||++.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~ 169 (362)
T d1q8ya_ 92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLI 169 (362)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccc
Confidence 4444445554444332 455667899999999999993 37899999999999998554
Q ss_pred ceEEccccchhhh---------------------------------hhhhhhhhcCCCCCc
Q 036266 280 VAHVSDFNISKLL---------------------------------GVLLPETFTRKKPTI 307 (312)
Q Consensus 280 ~~kl~DFG~a~~~---------------------------------g~~~~e~~tg~~p~~ 307 (312)
.+|++|||.|+.. |++++|+++|+.||.
T Consensus 170 ~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~ 230 (362)
T d1q8ya_ 170 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 230 (362)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-
T ss_pred eeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCC
Confidence 4999999998764 889999999999975
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=6.1e-25 Score=177.14 Aligned_cols=127 Identities=14% Similarity=0.099 Sum_probs=101.6
Q ss_pred ccceEeccCCcEEEEEEEEcCCcEEEEEEeehhh------------------hHhHHHHHHHHHHhhcCCCCceeeeeee
Q 036266 156 NEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQL------------------ERAFRSFDSKCEVHKNVRHRNLIKILTT 217 (312)
Q Consensus 156 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------------------~~~~~~~~~e~~~l~~l~h~niv~~~~~ 217 (312)
.+.+.||+|+||.||+|...+|+.||||+++... .........|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 4578999999999999998889999999875321 1112345568889999999999988765
Q ss_pred eeecccccEEEEecccCCCCH-----HHHHHHHHHHHHHHHHHhCCCCCCceecCCCCCCeeeCCCCceEEccccchhhh
Q 036266 218 IAILILKPWYLSSCVMPNGDF-----PERLNIMIDMALAFEYLHHGRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKLL 292 (312)
Q Consensus 218 ~~~~~~~~~~l~~~~~~~g~~-----~~~~~i~~~i~~~l~ylH~~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~~ 292 (312)
.. .+++||+++++.. ....+++.|+++|++||| +.+|+||||||+|||++++ .++++|||.|+..
T Consensus 83 ~~------~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~ 152 (191)
T d1zara2 83 EG------NAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV 152 (191)
T ss_dssp ET------TEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred cC------CEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence 32 2577889887633 344579999999999999 8999999999999999865 5899999998665
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.80 E-value=6.1e-20 Score=158.74 Aligned_cols=70 Identities=34% Similarity=0.534 Sum_probs=61.3
Q ss_pred ccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccccccccCC
Q 036266 70 FESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCAHQD 139 (312)
Q Consensus 70 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~~~~ 139 (312)
++.+++|+.|+|++|+++|.+|.+|.++++|++|+|++|+++|.+|....+.++..+.+.+|+.+|+.+.
T Consensus 240 ~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~pl 309 (313)
T d1ogqa_ 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTS
T ss_pred cccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCC
Confidence 4556778899999999999999999999999999999999999999877788888888999988888653
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.78 E-value=1.3e-19 Score=145.58 Aligned_cols=124 Identities=24% Similarity=0.267 Sum_probs=60.1
Q ss_pred EEeecCCcccccCccccccCCCCCEEeccCCcCCcC-CCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCC
Q 036266 6 QINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGD-IPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84 (312)
Q Consensus 6 ~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 84 (312)
.++.++|+|+ .+|+.+. +.+++|+|++|+|++. .+..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 4455555555 4444332 3455555555555432 2333445555555555555555444555555555555555555
Q ss_pred ccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccc
Q 036266 85 NLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNY 132 (312)
Q Consensus 85 ~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~ 132 (312)
+|+...|.+|.++++|++|+|++|+|++..|.. ..+.++..+.+.+|+
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccc
Confidence 555444444555555555555555555433332 233444444444444
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.74 E-value=4e-18 Score=136.72 Aligned_cols=112 Identities=28% Similarity=0.323 Sum_probs=104.1
Q ss_pred CCCcEEeecCCcccccC-ccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 2 EYILQINLFSNSLSGSL-PSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++++|+|++|+|++.+ +..|.++++|+.|+|++|++.+..+..|..+++|++|+|++|+++...|..|.++++|++|+
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~ 108 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLN 108 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEE
T ss_pred CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccc
Confidence 47899999999998755 56789999999999999999999999999999999999999999988888999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
|++|+|++..|.+|..+++|++|++++|.+...
T Consensus 109 L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 109 LYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCccccccCHHHhcCCcccccccccccccccc
Confidence 999999988888899999999999999998743
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=1.7e-17 Score=139.95 Aligned_cols=134 Identities=32% Similarity=0.327 Sum_probs=99.4
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|+|++|+++ .+|..+.++++|+.|++++|.+.+..+..+..+.++++|++++|.++...+..+..+++|+.++
T Consensus 76 l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~ 154 (266)
T d1p9ag_ 76 LPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (266)
T ss_dssp CTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccccccccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcc
Confidence 345566666666655 3344556666666666666666655566666667777777777777766666778889999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCC-CccCCCcccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPT-NVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~-~~~~~~l~~l~~~~n~~l~~ 136 (312)
+++|++++..|..|..+++|++|+|++|+|+ .+|. ......+..+.+.+|+..|.
T Consensus 155 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred cccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCCC
Confidence 9999999877788999999999999999999 5654 45677888899999987775
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.72 E-value=1.4e-17 Score=123.73 Aligned_cols=103 Identities=27% Similarity=0.321 Sum_probs=91.8
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCC
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSN 84 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N 84 (312)
+.|+|++|+|+ .+| .+..+++|++|++++|+++ .+|+.++.+++|++|++++|+++ .+| .++.+++|++|++++|
T Consensus 1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCC
Confidence 57999999999 666 4999999999999999998 67888999999999999999999 555 5999999999999999
Q ss_pred ccCCCc-chhHhhcCCCcEEEeeCceeec
Q 036266 85 NLSGKI-PKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 85 ~l~~~~-p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
+++... +..+..+++|+.|++++|+++.
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCCc
Confidence 998532 2578999999999999999974
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.71 E-value=6.4e-18 Score=145.83 Aligned_cols=115 Identities=33% Similarity=0.513 Sum_probs=108.7
Q ss_pred CCcEEeecCCcccc--cCccccccCCCCCEEeccC-CcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEE
Q 036266 3 YILQINLFSNSLSG--SLPSNIQNLKVLIGLDLSI-NRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFL 79 (312)
Q Consensus 3 ~L~~l~l~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 79 (312)
+++.|+|++|+++| .+|+++++|++|++|+|++ |+++|.+|.+|++|++|++|+|++|++.+..|..+..+..|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 58999999999998 5889999999999999986 89999999999999999999999999999999999999999999
Q ss_pred eccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC
Q 036266 80 DLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN 117 (312)
Q Consensus 80 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~ 117 (312)
+++.|++.+.+|.++.+++.|+.+++++|.+++.+|..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~ 168 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS 168 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccc
Confidence 99999999999999999999999999999999998864
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=4.6e-17 Score=138.47 Aligned_cols=136 Identities=26% Similarity=0.271 Sum_probs=118.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.+.+..+..+...++|+.+++++|++++..+..|..+++|+.|++++|++++..|..|..+++|+.++
T Consensus 104 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~ 183 (284)
T d1ozna_ 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (284)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhh
Confidence 47899999999999877777888899999999999999987788899999999999999999988888899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC-ccCCCcccccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN-VPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~-~~~~~l~~l~~~~n~~l~~ 136 (312)
+++|++++..|.+|..+++|++|++++|.+++..|.. ....++..+.+.+|+..|.
T Consensus 184 l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (284)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred hhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCC
Confidence 9999999888999999999999999999998766543 3567788888888887764
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=1.3e-16 Score=124.12 Aligned_cols=106 Identities=21% Similarity=0.182 Sum_probs=91.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.+|++|+|++|+|+ .+|..+..+++|+.|+|++|.++. ++ .|..+++|++|++++|+++...+..+..+++|++|++
T Consensus 18 ~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~~-l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L 94 (162)
T d1a9na_ 18 VRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK-LD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 94 (162)
T ss_dssp TSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCE-EC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred CcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCCc-cC-CcccCcchhhhhcccccccCCCcccccccccccccee
Confidence 46889999999998 667777889999999999999984 44 5889999999999999999655555678999999999
Q ss_pred cCCccCCCcc--hhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIP--KSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p--~~~~~l~~L~~L~l~~N~~~ 111 (312)
++|+++. ++ ..+..+++|++|++++|.++
T Consensus 95 ~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 95 TNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ccccccc-cccccccccccccchhhcCCCccc
Confidence 9999984 44 46888999999999999987
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=2.3e-16 Score=134.12 Aligned_cols=113 Identities=28% Similarity=0.291 Sum_probs=106.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.+++++|+|++..+..|..+++|+.|++++|++.+..|..|.++++|+++++++|++++..|..|..+++|++||
T Consensus 128 ~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~ 207 (284)
T d1ozna_ 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLY 207 (284)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred hcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccc
Confidence 36799999999999977778899999999999999999998999999999999999999999999999999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeecc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGE 113 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~ 113 (312)
+++|++++..|..|.++++|++|++++|.+...
T Consensus 208 l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~ 240 (284)
T d1ozna_ 208 LFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240 (284)
T ss_dssp CCSSCCSCCCHHHHTTCTTCCEEECCSSCEECS
T ss_pred ccccccccccccccccccccCEEEecCCCCCCC
Confidence 999999988889999999999999999999854
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=3.3e-15 Score=125.63 Aligned_cols=110 Identities=24% Similarity=0.138 Sum_probs=103.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.+.+..+..+..+.+++.|++++|.+.+..+..+..+++|+.+++++|++++..|..|..+++|++||
T Consensus 99 l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~ 178 (266)
T d1p9ag_ 99 LPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178 (266)
T ss_dssp CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEE
T ss_pred ccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceee
Confidence 57899999999999988888899999999999999999988888899999999999999999988888899999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
|++|+|+ .+|+.+..+++|+.|+|++|.+.
T Consensus 179 Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 9999999 89999999999999999999875
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=5.6e-15 Score=109.31 Aligned_cols=100 Identities=28% Similarity=0.374 Sum_probs=84.5
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC-CccccCCCCCCEE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI-PKSFESLASLEFL 79 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L 79 (312)
+++|++|++++|+|+ .+|+.++.+++|+.|++++|.+++ +| .+..+++|++|++++|+++... +..+..+++|+.|
T Consensus 19 l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~L~~L 95 (124)
T d1dcea3 19 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLL 95 (124)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEE
T ss_pred CCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cC-ccccccccCeEECCCCccCCCCCchhhcCCCCCCEE
Confidence 478999999999999 788889999999999999999995 55 4899999999999999998432 3578999999999
Q ss_pred eccCCccCCC---cchhHhhcCCCcEE
Q 036266 80 DLSSNNLSGK---IPKSLEALSNLKEL 103 (312)
Q Consensus 80 ~l~~N~l~~~---~p~~~~~l~~L~~L 103 (312)
++++|.++.. ....+..+++|+.+
T Consensus 96 ~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 96 NLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp ECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 9999999742 23445567888765
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=5.4e-15 Score=114.00 Aligned_cols=107 Identities=20% Similarity=0.118 Sum_probs=90.9
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCC-cCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSIN-RLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
..+.++.+++++. ..|..+..+++|+.|++++| .+....+.+|.++++|+.|+|++|+++...|.+|..+++|++|+|
T Consensus 9 ~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceec
Confidence 3567888999988 67888999999999999766 488777788999999999999999999777888999999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
++|+|+ .+|.......+|+.|++++|.+.
T Consensus 88 s~N~l~-~l~~~~~~~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 88 SFNALE-SLSWKTVQGLSLQELVLSGNPLH 116 (156)
T ss_dssp CSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred cCCCCc-ccChhhhccccccccccCCCccc
Confidence 999999 55555444557999999999874
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.53 E-value=1.8e-14 Score=123.32 Aligned_cols=128 Identities=22% Similarity=0.295 Sum_probs=108.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.+++++|+++ .+|..+ +++|+.|++++|...+..+..|.+++.++.|++++|.+++..|..+..+++|++|+
T Consensus 149 l~~L~~l~l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~ 225 (305)
T d1xkua_ 149 MKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 225 (305)
T ss_dssp CTTCCEEECCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred ccccCccccccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeee
Confidence 467899999999998 666554 67899999999999999999999999999999999999988888999999999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCC--------ccCCCccccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTN--------VPFGNFSSQSFISNYA 133 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~--------~~~~~l~~l~~~~n~~ 133 (312)
|++|+|+ .+|.++..+++|++|++++|+|+. ++.. ....++..+.+.+|+.
T Consensus 226 L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~-i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 226 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISA-IGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC-CCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred ccccccc-ccccccccccCCCEEECCCCccCc-cChhhccCcchhcccCCCCEEECCCCcC
Confidence 9999998 678899999999999999999984 4321 1234566667777763
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.52 E-value=3.4e-14 Score=115.01 Aligned_cols=123 Identities=25% Similarity=0.306 Sum_probs=83.0
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|++|+|++|++++ ++ .++++++|+.|++++|++++ +| .+..+++|+.|++++|.+. .+ ..+..+++++.++
T Consensus 67 l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~~~~~-~~-~~l~~l~~l~~l~ 140 (210)
T d1h6ta2 67 LPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLY 140 (210)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEE
T ss_pred CCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cc-ccccccccccccccccccc-cc-ccccccccccccc
Confidence 4567777777777774 33 25677777777777777763 44 3666777777777777665 22 3466666777777
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++.|.+++ +..+..+++|+.+++++|++++ ++....+.++..+.+.+|.
T Consensus 141 ~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~-i~~l~~l~~L~~L~Ls~N~ 189 (210)
T d1h6ta2 141 LGNNKITD--ITVLSRLTKLDTLSLEDNQISD-IVPLAGLTKLQNLYLSKNH 189 (210)
T ss_dssp CCSSCCCC--CGGGGGCTTCSEEECCSSCCCC-CGGGTTCTTCCEEECCSSC
T ss_pred cccccccc--cccccccccccccccccccccc-cccccCCCCCCEEECCCCC
Confidence 77777763 3356778889999999998885 3434556777777777664
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.51 E-value=4.6e-14 Score=113.28 Aligned_cols=102 Identities=23% Similarity=0.370 Sum_probs=53.6
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
++|+.|++++|.++ .++ .+..+++|++|++++|++++..| +.++++|++|++++|.+. .+| .+..+++|+.|++
T Consensus 40 ~~l~~L~l~~~~i~-~l~-~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l 113 (199)
T d2omxa2 40 DQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTL 113 (199)
T ss_dssp TTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEEC
T ss_pred cCCCEEECCCCCCC-Ccc-ccccCCCcCcCccccccccCccc--ccCCcccccccccccccc-ccc-ccccccccccccc
Confidence 35556666666655 333 35556666666666666554322 555666666666666554 233 2455555555555
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceee
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~ 111 (312)
++|.+... ..+..+++|+.|++++|++.
T Consensus 114 ~~~~~~~~--~~~~~l~~L~~L~l~~n~l~ 141 (199)
T d2omxa2 114 FNNQITDI--DPLKNLTNLNRLELSSNTIS 141 (199)
T ss_dssp CSSCCCCC--GGGTTCTTCSEEECCSSCCC
T ss_pred cccccccc--cccchhhhhHHhhhhhhhhc
Confidence 55555421 23445555555555555544
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=1.2e-14 Score=112.68 Aligned_cols=100 Identities=23% Similarity=0.245 Sum_probs=86.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCC--ccccCCCCCCE
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIP--KSFESLASLEF 78 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p--~~~~~l~~L~~ 78 (312)
+++|+.|+|++|.|+ .++ .|..+++|++|++++|+++...+..+..+++|+.|++++|+++ .++ ..+..+++|++
T Consensus 40 l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~-~~~~l~~l~~l~~L~~ 116 (162)
T d1a9na_ 40 LDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 116 (162)
T ss_dssp TTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred cccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCccccccccccccceecccccc-ccccccccccccccch
Confidence 578999999999999 555 5899999999999999999766666778999999999999998 444 46889999999
Q ss_pred EeccCCccCCCcc----hhHhhcCCCcEEE
Q 036266 79 LDLSSNNLSGKIP----KSLEALSNLKELN 104 (312)
Q Consensus 79 L~l~~N~l~~~~p----~~~~~l~~L~~L~ 104 (312)
|++++|.++ ..| ..+..+++|++||
T Consensus 117 L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 117 LCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred hhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 999999998 455 3688899999887
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=3.8e-14 Score=121.27 Aligned_cols=110 Identities=16% Similarity=0.202 Sum_probs=99.1
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|..++..+..|.+++.++.|++++|.+.+..|..+.++++|++|+|++|+++ .+|.+|..+++|++|+
T Consensus 170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~ 248 (305)
T d1xkua_ 170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 248 (305)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEE
Confidence 468999999999999999999999999999999999999999999999999999999999998 7799999999999999
Q ss_pred ccCCccCCCcchh------HhhcCCCcEEEeeCceee
Q 036266 81 LSSNNLSGKIPKS------LEALSNLKELNVSYNRLE 111 (312)
Q Consensus 81 l~~N~l~~~~p~~------~~~l~~L~~L~l~~N~~~ 111 (312)
|++|+|+...+.. +..+.+|+.|++++|.++
T Consensus 249 Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 249 LHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred CCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 9999999432223 345678999999999985
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.47 E-value=1.4e-13 Score=110.41 Aligned_cols=123 Identities=29% Similarity=0.432 Sum_probs=102.9
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|++|+|++|++++..| ++++++|+.|++++|.+.. +| .+.++++|+.|++++|.+... ..+..+++|+.|+
T Consensus 61 l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~ 134 (199)
T d2omxa2 61 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLE 134 (199)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEE
T ss_pred CCCcCcCccccccccCccc--ccCCccccccccccccccc-cc-ccccccccccccccccccccc--cccchhhhhHHhh
Confidence 5799999999999996443 9999999999999999874 44 388999999999999998743 3588899999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+++|+++ .+| .+..+++|+.|++++|++++ ++....+.++..+.+.+|.
T Consensus 135 l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~-l~~l~~l~~L~~L~ls~N~ 183 (199)
T d2omxa2 135 LSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTD-LKPLANLTTLERLDISSNK 183 (199)
T ss_dssp CCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CGGGTTCTTCCEEECCSSC
T ss_pred hhhhhhc-ccc-cccccccccccccccccccC-CccccCCCCCCEEECCCCC
Confidence 9999998 444 68899999999999999985 4444567788888887764
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.46 E-value=6.6e-16 Score=124.07 Aligned_cols=111 Identities=24% Similarity=0.288 Sum_probs=62.8
Q ss_pred cCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcchhHhh
Q 036266 17 SLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEA 96 (312)
Q Consensus 17 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 96 (312)
.+|.++..|++|+.|+|++|+++ .++ .+.++++|++|+|++|+++ .+|..+..+++|++|++++|+++. + +.+..
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~ 113 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEK 113 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHH
T ss_pred hhhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccc
Confidence 34455666666666666666665 333 3666666666666666665 445444444566666666666663 3 24556
Q ss_pred cCCCcEEEeeCceeeccC--CCCccCCCcccccccccc
Q 036266 97 LSNLKELNVSYNRLEGEI--PTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 97 l~~L~~L~l~~N~~~~~~--p~~~~~~~l~~l~~~~n~ 132 (312)
+++|+.|++++|+++... .....++++..+.+.+|+
T Consensus 114 l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 114 LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccccccccchhccccccccccCCCccceeecCCCc
Confidence 666666666666665321 112334555555555554
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.44 E-value=1.8e-13 Score=120.35 Aligned_cols=124 Identities=26% Similarity=0.331 Sum_probs=61.3
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC---------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI--------------- 66 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~--------------- 66 (312)
++|+.|++++|.++. +| .+..+++|+.|++++|.+++..| +..+++|++|++++|++++..
T Consensus 219 ~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~~~ 294 (384)
T d2omza2 219 TNLDELSLNGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 294 (384)
T ss_dssp TTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCS
T ss_pred CCCCEEECCCCCCCC-cc-hhhcccccchhccccCccCCCCc--ccccccCCEeeccCcccCCCCccccccccccccccc
Confidence 345555555555542 22 34455555555555555543222 444444444444444443211
Q ss_pred -----CccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 67 -----PKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 67 -----p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
+..+..+++++.|++++|++++.. .+..+++|+.|++++|++++ +|....++++..+.+.+|.
T Consensus 295 n~l~~~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 295 NQLEDISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VSSLANLTNINWLSAGHNQ 362 (384)
T ss_dssp SCCSCCGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECCSSC
T ss_pred cccccccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-ChhHcCCCCCCEEECCCCc
Confidence 122444556666666666666432 25566666666666666653 3333444555555555443
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=4.7e-13 Score=102.88 Aligned_cols=113 Identities=20% Similarity=0.207 Sum_probs=94.6
Q ss_pred ccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCC-cCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCc
Q 036266 23 QNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGN-RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLK 101 (312)
Q Consensus 23 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 101 (312)
......+.++.+++.+. ..|..+.++++|++|++++| .++...+.+|.++++|+.|+|++|+|+...|.+|..+++|+
T Consensus 5 C~c~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~ 83 (156)
T d2ifga3 5 CCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83 (156)
T ss_dssp SCCSSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCC
T ss_pred CCcCCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccc
Confidence 34455677899999988 67888999999999999866 58866678899999999999999999977788999999999
Q ss_pred EEEeeCceeeccCCCCccCCCcccccccccccccc
Q 036266 102 ELNVSYNRLEGEIPTNVPFGNFSSQSFISNYALCA 136 (312)
Q Consensus 102 ~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~~l~~ 136 (312)
+|+|++|+++...+.......+..+.+.+|+..|.
T Consensus 84 ~L~Ls~N~l~~l~~~~~~~~~l~~L~L~~Np~~C~ 118 (156)
T d2ifga3 84 RLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (156)
T ss_dssp EEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred ceeccCCCCcccChhhhccccccccccCCCcccCC
Confidence 99999999995555545555788888889986653
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.39 E-value=7.4e-13 Score=106.99 Aligned_cols=122 Identities=27% Similarity=0.335 Sum_probs=100.2
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEec
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDL 81 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l 81 (312)
.+|+.|++++|.++. ++ .+..+++|++|++++|++++. + .++.+++|++|++++|+++ .+| .+..+++|+.|++
T Consensus 46 ~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 46 NSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEEC
T ss_pred cCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccccCc-c-ccccCcccccccccccccc-ccc-ccccccccccccc
Confidence 578999999999984 44 488999999999999999864 4 3688999999999999998 455 5899999999999
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCcccccccccc
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISNY 132 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n~ 132 (312)
++|.+. .+ ..+..++.++.+++++|.++. ++....+.++..+.+.+|.
T Consensus 120 ~~~~~~-~~-~~l~~l~~l~~l~~~~n~l~~-~~~~~~l~~L~~l~l~~n~ 167 (210)
T d1h6ta2 120 EHNGIS-DI-NGLVHLPQLESLYLGNNKITD-ITVLSRLTKLDTLSLEDNQ 167 (210)
T ss_dssp TTSCCC-CC-GGGGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSC
T ss_pred cccccc-cc-ccccccccccccccccccccc-ccccccccccccccccccc
Confidence 999987 34 468899999999999999874 3334456677777776664
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.33 E-value=2e-12 Score=113.39 Aligned_cols=122 Identities=27% Similarity=0.323 Sum_probs=101.7
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|+.|++++|.+++.. .+..++.++.++++.|.+.+ + ..+..+++++.|++++|++++. + .+..+++|+.|+
T Consensus 262 ~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~l-~-~l~~l~~L~~L~ 335 (384)
T d2omza2 262 LTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED-I-SPISNLKNLTYLTLYFNNISDI-S-PVSSLTKLQRLF 335 (384)
T ss_dssp CTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC-C-GGGGGCTTCSEEECCSSCCSCC-G-GGGGCTTCCEEE
T ss_pred cccCCEeeccCcccCCCC--cccccccccccccccccccc-c-cccchhcccCeEECCCCCCCCC-c-ccccCCCCCEEE
Confidence 478999999999999543 38889999999999999985 3 3488899999999999999964 3 388899999999
Q ss_pred ccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccccccc
Q 036266 81 LSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQSFISN 131 (312)
Q Consensus 81 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~~~~n 131 (312)
+++|++++ +| .+.++++|++|++++|++++.+| ...+.++..+.+..|
T Consensus 336 L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~-l~~l~~L~~L~L~~N 383 (384)
T d2omza2 336 FANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG-GTTCTTCSEEECCCE
T ss_pred CCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh-hccCCCCCEeeCCCC
Confidence 99999984 55 68999999999999999997655 455667777776554
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.33 E-value=2.5e-14 Score=114.63 Aligned_cols=110 Identities=22% Similarity=0.286 Sum_probs=95.2
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
|++|++|+|++|+|+ .++ .+.+|++|+.|+|++|.+. .+|..+..+++|++|++++|+++. + +.+..+++|+.|+
T Consensus 47 L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~ 121 (198)
T d1m9la_ 47 LKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVNLRVLY 121 (198)
T ss_dssp TTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHHSSEEE
T ss_pred ccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-ccccccccccccc
Confidence 578999999999999 566 5999999999999999998 577666677899999999999984 4 3588899999999
Q ss_pred ccCCccCCCcc--hhHhhcCCCcEEEeeCceeeccCCC
Q 036266 81 LSSNNLSGKIP--KSLEALSNLKELNVSYNRLEGEIPT 116 (312)
Q Consensus 81 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~~~~~~p~ 116 (312)
+++|+++. ++ ..+..+++|+.|++++|++....+.
T Consensus 122 L~~N~i~~-~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 158 (198)
T d1m9la_ 122 MSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCC-HHHHHHHTTTTTCSEEEECSSHHHHHHCT
T ss_pred cccchhcc-ccccccccCCCccceeecCCCccccCccc
Confidence 99999984 44 5789999999999999999866554
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.29 E-value=1.1e-11 Score=101.13 Aligned_cols=58 Identities=29% Similarity=0.487 Sum_probs=31.8
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCC
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQ 63 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 63 (312)
++|+.|++++|+++ .++ .+..+++|+.|++++|++.+..| +..+++|+++++++|.++
T Consensus 41 ~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~ 98 (227)
T d1h6ua2 41 DGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (227)
T ss_dssp HTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred CCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeecccc--cccccccccccccccccc
Confidence 35566666666665 333 35666666666666666654322 455555555555555444
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.21 E-value=3.2e-11 Score=98.26 Aligned_cols=120 Identities=23% Similarity=0.362 Sum_probs=75.6
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCC--------------------cCccCCCCCCEEeCCCC
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIP--------------------ITISGLKDLTTLFLAGN 60 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--------------------~~~~~l~~L~~L~l~~n 60 (312)
+++|+.+++++|.++ .++ .+..++.|+.++++++...+..+ ..+..+++|++|++++|
T Consensus 84 l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n 161 (227)
T d1h6ua2 84 LTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNA 161 (227)
T ss_dssp CCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSS
T ss_pred ccccccccccccccc-ccc-cccccccccccccccccccccchhccccchhhhhchhhhhchhhhhcccccccccccccc
Confidence 467888888888887 455 47888888888888887664322 12344556667777766
Q ss_pred cCCCCCCccccCCCCCCEEeccCCccCCCcchhHhhcCCCcEEEeeCceeeccCCCCccCCCccccc
Q 036266 61 RSQGSIPKSFESLASLEFLDLSSNNLSGKIPKSLEALSNLKELNVSYNRLEGEIPTNVPFGNFSSQS 127 (312)
Q Consensus 61 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p~~~~~~~l~~l~ 127 (312)
.+++. ..++.+++|+.|+|++|++++ +| .+.++++|++|++++|+++. +|....+.++..+.
T Consensus 162 ~~~~~--~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~-i~~l~~l~~L~~L~ 223 (227)
T d1h6ua2 162 QVSDL--TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISD-VSPLANTSNLFIVT 223 (227)
T ss_dssp CCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCB-CGGGTTCTTCCEEE
T ss_pred ccccc--hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCC-CcccccCCCCCEEE
Confidence 66532 236667777777777777764 33 36667777777777777663 33223344444433
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=5.9e-11 Score=97.46 Aligned_cols=85 Identities=18% Similarity=0.253 Sum_probs=49.9
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCC-CcCccCCCCCCEEeCC-CCcCCCCCCccccCCCCCCEEe
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDI-PITISGLKDLTTLFLA-GNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~-~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
++++|+|++|+|+...+..|.++++|++|++++|.+...+ +..|.++++++++.+. .|++....|..|.++++|+.++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccc
Confidence 5666666666666433445666666666666666655433 3345566666666554 3455555555566666666666
Q ss_pred ccCCccC
Q 036266 81 LSSNNLS 87 (312)
Q Consensus 81 l~~N~l~ 87 (312)
+++|.++
T Consensus 110 l~~~~l~ 116 (242)
T d1xwdc1 110 ISNTGIK 116 (242)
T ss_dssp EESCCCC
T ss_pred cchhhhc
Confidence 6666665
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=8.8e-11 Score=96.37 Aligned_cols=105 Identities=22% Similarity=0.287 Sum_probs=90.8
Q ss_pred cEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC-CccccCCCCCCEEecc-
Q 036266 5 LQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI-PKSFESLASLEFLDLS- 82 (312)
Q Consensus 5 ~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~-p~~~~~l~~L~~L~l~- 82 (312)
+.++.++++++ .+|+.+. +++++|++++|++....+..|.++++|++|++++|.+...+ +..|..++.++.+++.
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 57888999999 7887664 47999999999999777778999999999999999988654 4578999999999986
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeec
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
.|+++...|..|..+++|+++++++|.+..
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~ 117 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKH 117 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCS
T ss_pred cccccccccccccccccccccccchhhhcc
Confidence 478887788889999999999999999974
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.06 E-value=3.9e-10 Score=97.11 Aligned_cols=99 Identities=30% Similarity=0.359 Sum_probs=81.6
Q ss_pred CCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEecc
Q 036266 3 YILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLS 82 (312)
Q Consensus 3 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~ 82 (312)
+++.|||++|.|+ .+|+. +++|++|++++|+|+ .+|..+ .+|+.|++++|+++ .+++- .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 6899999999998 68864 468999999999998 678654 58899999999998 55531 2469999999
Q ss_pred CCccCCCcchhHhhcCCCcEEEeeCceeeccCC
Q 036266 83 SNNLSGKIPKSLEALSNLKELNVSYNRLEGEIP 115 (312)
Q Consensus 83 ~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~p 115 (312)
+|.++ .+|. +..+++|+.|++++|.++...+
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~~~~ 137 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKKLPD 137 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSCCCC
T ss_pred ccccc-cccc-hhhhccceeecccccccccccc
Confidence 99998 5674 5789999999999998875443
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=1.9e-10 Score=102.53 Aligned_cols=111 Identities=22% Similarity=0.229 Sum_probs=87.2
Q ss_pred CCCcEEeecCCcccccC-ccccccCCCCCEEeccCCcCCc----CCCcCccCCCCCCEEeCCCCcCCCC----CCcccc-
Q 036266 2 EYILQINLFSNSLSGSL-PSNIQNLKVLIGLDLSINRLYG----DIPITISGLKDLTTLFLAGNRSQGS----IPKSFE- 71 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~- 71 (312)
++|+.||+++|++++.- ..-+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++.. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 47899999999998642 3456788999999999998873 3556678899999999999998621 223332
Q ss_pred CCCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeec
Q 036266 72 SLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 72 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
...+|++|+|++|+++.. ++..+..+++|++|++++|.++.
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchh
Confidence 235799999999999754 45677788999999999998864
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=98.75 E-value=4.7e-08 Score=83.64 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=65.0
Q ss_pred CCCCcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEe
Q 036266 1 LEYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLD 80 (312)
Q Consensus 1 l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 80 (312)
+++|++|+|++|+|+ .+|+.+ .+|+.|++++|+++ .++... ++|++|++++|.+. .+|. ++.+++|+.|+
T Consensus 57 ~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~lp---~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~ 126 (353)
T d1jl5a_ 57 PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDLP---PLLEYLGVSNNQLE-KLPE-LQNSSFLKIID 126 (353)
T ss_dssp CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhhc---cccccccccccccc-cccc-hhhhccceeec
Confidence 368999999999999 788764 57889999999998 455321 46999999999998 6674 68899999999
Q ss_pred ccCCccCC
Q 036266 81 LSSNNLSG 88 (312)
Q Consensus 81 l~~N~l~~ 88 (312)
+++|.++.
T Consensus 127 l~~~~~~~ 134 (353)
T d1jl5a_ 127 VDNNSLKK 134 (353)
T ss_dssp CCSSCCSC
T ss_pred cccccccc
Confidence 99999874
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=2.1e-10 Score=88.27 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=62.6
Q ss_pred CcEEeecCCcccccCccccccCCCCCEEeccCCcCCcCCCcCccCCCCCCEEeCCCCcCCCCC--CccccCCCCCCEEec
Q 036266 4 ILQINLFSNSLSGSLPSNIQNLKVLIGLDLSINRLYGDIPITISGLKDLTTLFLAGNRSQGSI--PKSFESLASLEFLDL 81 (312)
Q Consensus 4 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~--p~~~~~l~~L~~L~l 81 (312)
.+.|+++++... | .+..+..+..++..+|... .++..+..+++|++|+|++|+++..- +..+..+++|+.|||
T Consensus 24 ~~~Ldls~l~~~---~-~l~~~~~~~~l~~~~~~~~-~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~L 98 (162)
T d1koha1 24 QQALDLKGLRSD---P-DLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNL 98 (162)
T ss_dssp SCCBCCCCCSSC---T-TTTTTTCCCCTTSHHHHHH-HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCC
T ss_pred hCeeecccCCCC---c-hhhhccchhhcchhhhHhh-hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCccccccc
Confidence 455666665422 2 2444444444455544433 44444556777888888888777432 344566777888888
Q ss_pred cCCccCCCcchhHhhcCCCcEEEeeCceeeccC
Q 036266 82 SSNNLSGKIPKSLEALSNLKELNVSYNRLEGEI 114 (312)
Q Consensus 82 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~~~~~~ 114 (312)
++|.++...+-.+.....|+.|++++|.++...
T Consensus 99 s~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~ 131 (162)
T d1koha1 99 SGNELKSERELDKIKGLKLEELWLDGNSLSDTF 131 (162)
T ss_dssp TTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSS
T ss_pred ccCccccchhhhhhhccccceeecCCCCcCcCc
Confidence 888877433323344456777777777776443
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=2.3e-09 Score=82.29 Aligned_cols=92 Identities=28% Similarity=0.270 Sum_probs=69.4
Q ss_pred cCccccccCCCCCEEeccCCcCCcC--CCcCccCCCCCCEEeCCCCcCCCCCCccccCCCCCCEEeccCCccCCCcch--
Q 036266 17 SLPSNIQNLKVLIGLDLSINRLYGD--IPITISGLKDLTTLFLAGNRSQGSIPKSFESLASLEFLDLSSNNLSGKIPK-- 92 (312)
Q Consensus 17 ~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-- 92 (312)
.++..+..+++|++|+|++|+++.. ++..+..+++|+.|+|++|+++..-+-.+.....|+.|++++|.++.....
T Consensus 56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~ 135 (162)
T d1koha1 56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135 (162)
T ss_dssp HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHH
T ss_pred hhHHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccch
Confidence 4555567899999999999999854 245577899999999999999943332344456799999999999865442
Q ss_pred -----hHhhcCCCcEEEeeCcee
Q 036266 93 -----SLEALSNLKELNVSYNRL 110 (312)
Q Consensus 93 -----~~~~l~~L~~L~l~~N~~ 110 (312)
.+..+++|+.|| ++.+
T Consensus 136 ~y~~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 136 TYISAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHHHHHHTTSTTCCEET--TEEC
T ss_pred hHHHHHHHHCCCCCEEC--cCCC
Confidence 356789999886 5554
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.62 E-value=8.1e-09 Score=86.65 Aligned_cols=129 Identities=18% Similarity=0.124 Sum_probs=80.7
Q ss_pred CCCcEEeecCCcccccCccccccCCCCCEEeccCC-cCCcC-CCcCccCCCCCCEEeCCCC-cCCC--------------
Q 036266 2 EYILQINLFSNSLSGSLPSNIQNLKVLIGLDLSIN-RLYGD-IPITISGLKDLTTLFLAGN-RSQG-------------- 64 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~~L~~L~l~~n-~l~~-------------- 64 (312)
++|++|+|++|.+++..+..++.+++|+.|+++++ .++.. +...+..+++|++|+++++ .++.
T Consensus 71 ~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L 150 (284)
T d2astb2 71 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 150 (284)
T ss_dssp CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhccccccc
Confidence 57777777777777666777777777777777774 34311 1122334566666666653 2221
Q ss_pred --------------C-CCccccCCCCCCEEeccCC-ccCCCcchhHhhcCCCcEEEeeCc-eeeccCCC-CccCCCcccc
Q 036266 65 --------------S-IPKSFESLASLEFLDLSSN-NLSGKIPKSLEALSNLKELNVSYN-RLEGEIPT-NVPFGNFSSQ 126 (312)
Q Consensus 65 --------------~-~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N-~~~~~~p~-~~~~~~l~~l 126 (312)
. +...+..+++|++|++++| .+++..+..+.++++|++|+++++ .++..... ....+++..+
T Consensus 151 ~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L 230 (284)
T d2astb2 151 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 230 (284)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred chhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEE
Confidence 0 0111235789999999986 578778888999999999999984 56543221 1234555555
Q ss_pred cccc
Q 036266 127 SFIS 130 (312)
Q Consensus 127 ~~~~ 130 (312)
.+.+
T Consensus 231 ~l~~ 234 (284)
T d2astb2 231 QVFG 234 (284)
T ss_dssp ECTT
T ss_pred eeeC
Confidence 5543
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.60 E-value=4.7e-09 Score=90.50 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=91.1
Q ss_pred CCCcEEeecCCccccc----CccccccCCCCCEEeccCCcCCcC-----CCcCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFSNSLSGS----LPSNIQNLKVLIGLDLSINRLYGD-----IPITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~-----~p~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
+.|+.+++++|+++.. +...+...+.|+.|+++.|.+... +...+..+++|+.|+|++|.++.. +..
T Consensus 158 ~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~ 237 (344)
T d2ca6a1 158 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237 (344)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccc
Confidence 5688899999987632 334456778999999999988632 445677788999999999987632 445
Q ss_pred cccCCCCCCEEeccCCccCCCcchhH----hh--cCCCcEEEeeCceeecc----CCCC--ccCCCcccccccccc
Q 036266 69 SFESLASLEFLDLSSNNLSGKIPKSL----EA--LSNLKELNVSYNRLEGE----IPTN--VPFGNFSSQSFISNY 132 (312)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l~~~~p~~~----~~--l~~L~~L~l~~N~~~~~----~p~~--~~~~~l~~l~~~~n~ 132 (312)
.+..+++|++|+|++|.+++.-...+ .. ...|++|++++|+++.. +... .....+..+.+.+|.
T Consensus 238 ~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred cccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 67788999999999999875433333 22 25689999999988632 1111 123456667666665
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.49 E-value=1.4e-08 Score=87.33 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=90.7
Q ss_pred CCCCcEEeecCCccc----ccC---------ccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCC
Q 036266 1 LEYILQINLFSNSLS----GSL---------PSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQ 63 (312)
Q Consensus 1 l~~L~~l~l~~n~l~----~~~---------p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~ 63 (312)
.++|+.|++++|.+. ..+ .......+.|+.+++++|.+... +...+...+.|++|+|++|+++
T Consensus 120 ~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 199 (344)
T d2ca6a1 120 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 199 (344)
T ss_dssp CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred cccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhccccccccccc
Confidence 368999999999762 011 11234667899999999987632 3344556788999999999986
Q ss_pred CC-----CCccccCCCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeeccCCC-------CccCCCccccc
Q 036266 64 GS-----IPKSFESLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEGEIPT-------NVPFGNFSSQS 127 (312)
Q Consensus 64 ~~-----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~~~p~-------~~~~~~l~~l~ 127 (312)
.. +...+..+++|+.|+|++|.++.. +...+..+++|++|++++|.+++.-.. ......+..+.
T Consensus 200 ~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ 279 (344)
T d2ca6a1 200 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 279 (344)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred ccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEE
Confidence 32 334567789999999999998632 445677888999999999988642110 01234566666
Q ss_pred ccccc
Q 036266 128 FISNY 132 (312)
Q Consensus 128 ~~~n~ 132 (312)
+.+|.
T Consensus 280 ls~N~ 284 (344)
T d2ca6a1 280 LQYNE 284 (344)
T ss_dssp CCSSC
T ss_pred CCCCc
Confidence 66654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.38 E-value=1.4e-06 Score=71.39 Aligned_cols=139 Identities=15% Similarity=0.054 Sum_probs=89.3
Q ss_pred hhccccccceEeccCCcEEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC-CCceeeeeeeeeecccccEEE
Q 036266 150 QATDEFNEWHLLGTESLGSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR-HRNLIKILTTIAILILKPWYL 228 (312)
Q Consensus 150 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~l 228 (312)
.....|+..+..+-++.+.||+... +++.+.+|+...........+.+|...++.+. +--+.+++.+... ....++
T Consensus 11 ~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~--~~~~~l 87 (263)
T d1j7la_ 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH--DGWSNL 87 (263)
T ss_dssp HHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE--TTEEEE
T ss_pred HhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEec--CCceEE
Confidence 3344555444433333467998753 56678899887654444445677888776654 2224455555443 344577
Q ss_pred EecccCCCCHHHH-------HHHHHHHHHHHHHHhCCC------------------------------------------
Q 036266 229 SSCVMPNGDFPER-------LNIMIDMALAFEYLHHGR------------------------------------------ 259 (312)
Q Consensus 229 ~~~~~~~g~~~~~-------~~i~~~i~~~l~ylH~~~------------------------------------------ 259 (312)
+|+++++.++.+. -+++.++++.++.+|...
T Consensus 88 v~~~l~G~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T d1j7la_ 88 LMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EEECCSSEEHHHHTTTCSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSH
T ss_pred EEEecccccccccccccccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHH
Confidence 8889988765432 246667777777777310
Q ss_pred --------------CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 --------------STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 --------------~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
...++|+|+.|.||++++++.+-|+||+.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 12278999999999999877777999987765
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.36 E-value=2.9e-08 Score=87.98 Aligned_cols=111 Identities=20% Similarity=0.172 Sum_probs=81.9
Q ss_pred CCCcEEeecCCcccccCcccc-----ccCCCCCEEeccCCcCCcCCC----cCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFSNSLSGSLPSNI-----QNLKVLIGLDLSINRLYGDIP----ITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
+.+..+++++|.++..-...+ .....|+.+++++|.+..... ..+...++|++|+|++|+++.. +++
T Consensus 283 ~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~ 362 (460)
T d1z7xw1 283 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 362 (460)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhh
Confidence 578899999999874322222 234579999999998875432 2334556899999999998642 344
Q ss_pred ccc-CCCCCCEEeccCCccCCC----cchhHhhcCCCcEEEeeCceeec
Q 036266 69 SFE-SLASLEFLDLSSNNLSGK----IPKSLEALSNLKELNVSYNRLEG 112 (312)
Q Consensus 69 ~~~-~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~~~~ 112 (312)
.+. ..+.|++|+|++|+|+.. +++.+..+++|++|++++|+++.
T Consensus 363 ~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~ 411 (460)
T d1z7xw1 363 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 411 (460)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred hhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCH
Confidence 443 467799999999999743 55667778999999999999864
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.32 E-value=5e-07 Score=75.36 Aligned_cols=108 Identities=19% Similarity=0.184 Sum_probs=81.7
Q ss_pred CCCCcEEeecCC-ccccc-Ccccccc-CCCCCEEeccCC--cCCc-CCCcCccCCCCCCEEeCCCC-cCCCCCCccccCC
Q 036266 1 LEYILQINLFSN-SLSGS-LPSNIQN-LKVLIGLDLSIN--RLYG-DIPITISGLKDLTTLFLAGN-RSQGSIPKSFESL 73 (312)
Q Consensus 1 l~~L~~l~l~~n-~l~~~-~p~~~~~-l~~L~~L~l~~N--~l~~-~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l 73 (312)
+++|+.|+++++ +++.. ++..+.. .+.|+.|++++. .++. .+...+..+++|++|++++| .+++..+..+..+
T Consensus 120 ~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~ 199 (284)
T d2astb2 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 199 (284)
T ss_dssp CTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred HHhccccccccccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhccc
Confidence 478999999996 45422 2333443 468999999864 3332 23334456899999999986 5777778889999
Q ss_pred CCCCEEeccC-CccCCCcchhHhhcCCCcEEEeeCc
Q 036266 74 ASLEFLDLSS-NNLSGKIPKSLEALSNLKELNVSYN 108 (312)
Q Consensus 74 ~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N 108 (312)
++|++|+|++ +.+++.....+.++++|+.|+++++
T Consensus 200 ~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 200 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 9999999999 5788777778899999999999876
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.29 E-value=1.6e-07 Score=72.04 Aligned_cols=109 Identities=15% Similarity=0.102 Sum_probs=71.0
Q ss_pred CCCcEEeecCC-ccccc----CccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFSN-SLSGS----LPSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
++|+.|+|+++ .++.. +-..+...+.|+.|+|++|.+... +...+...+.|++|+|++|.++.. +-.
T Consensus 15 ~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~ 94 (167)
T d1pgva_ 15 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 94 (167)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHH
Confidence 67888888874 45432 223456667888888888887632 223344567788888888887742 223
Q ss_pred cccCCCCCCEEeccCCccCCC-------cchhHhhcCCCcEEEeeCcee
Q 036266 69 SFESLASLEFLDLSSNNLSGK-------IPKSLEALSNLKELNVSYNRL 110 (312)
Q Consensus 69 ~~~~l~~L~~L~l~~N~l~~~-------~p~~~~~l~~L~~L~l~~N~~ 110 (312)
.+...++|++|+|++|.+... +...+..-++|+.|+++.+..
T Consensus 95 aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~~ 143 (167)
T d1pgva_ 95 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 143 (167)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCCc
Confidence 466667888888888765421 334555567788887766543
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.96 E-value=4.9e-06 Score=67.66 Aligned_cols=127 Identities=13% Similarity=0.069 Sum_probs=78.9
Q ss_pred EeccCCc-EEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCc--eeeeeeeeeecccccEEEEecccCCC
Q 036266 160 LLGTESL-GSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRN--LIKILTTIAILILKPWYLSSCVMPNG 236 (312)
Q Consensus 160 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~l~~~~~~~g 236 (312)
.+..|.. +.||+....++..+++|...... ...+..|.+.++.+.... +.+++.+... ....+++|+++++.
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~--~~~~~~v~~~i~G~ 91 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTE--AGRDWLLLGEVPGQ 91 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEEC--SSCEEEEEECCSSE
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeeccc--ccceEEEEEeeecc
Confidence 4445543 57899887677778899876442 234567777776664322 4455655443 34567788898765
Q ss_pred CHHH----HHHHHHHHHHHHHHHhC-------------------------------------------------------
Q 036266 237 DFPE----RLNIMIDMALAFEYLHH------------------------------------------------------- 257 (312)
Q Consensus 237 ~~~~----~~~i~~~i~~~l~ylH~------------------------------------------------------- 257 (312)
++.+ .-+.+.++++.++-||.
T Consensus 92 ~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 171 (255)
T d1nd4a_ 92 DLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 171 (255)
T ss_dssp ETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred ccccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCc
Confidence 2211 11223344444444441
Q ss_pred CCCCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 258 GRSTPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 258 ~~~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
.....++|+|+.|.||+++++..+-|+||+.+..
T Consensus 172 ~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 172 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 0112379999999999999877778999998765
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.62 E-value=4.3e-06 Score=63.60 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=69.2
Q ss_pred CCCcEEeecC-Cccccc----CccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeCCCCcCCCC----CCc
Q 036266 2 EYILQINLFS-NSLSGS----LPSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFLAGNRSQGS----IPK 68 (312)
Q Consensus 2 ~~L~~l~l~~-n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~----~p~ 68 (312)
++|++|+|++ |.++.. +-..+...++|+.|++++|.+... +-..+...++++.+++++|.+... +-+
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~ 96 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 96 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHH
Confidence 6788888887 455422 223345677888888888877542 233445567788888888877632 224
Q ss_pred cccCCCCCCEEec--cCCccCC----CcchhHhhcCCCcEEEeeCcee
Q 036266 69 SFESLASLEFLDL--SSNNLSG----KIPKSLEALSNLKELNVSYNRL 110 (312)
Q Consensus 69 ~~~~l~~L~~L~l--~~N~l~~----~~p~~~~~l~~L~~L~l~~N~~ 110 (312)
.+...++|+.++| +.|.+.. .+...+...++|+.|+++.+..
T Consensus 97 ~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 97 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 5566777876444 5666643 2445566777888888766543
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.58 E-value=7e-05 Score=64.93 Aligned_cols=75 Identities=8% Similarity=-0.038 Sum_probs=44.5
Q ss_pred ceEeccCCcEEEEEEEEcC-CcEEEEEEeehhh-------hHhHHHHHHHHHHhhcCC-C--CceeeeeeeeeecccccE
Q 036266 158 WHLLGTESLGSVYKWIFLD-ETNVAIKVFNLQL-------ERAFRSFDSKCEVHKNVR-H--RNLIKILTTIAILILKPW 226 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~~~ 226 (312)
.+.+|.|....||++...+ ++.++||.-.... .....+...|.+.++.+. + ..+.+++.+. ....
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d----~~~~ 106 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD----TEMA 106 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE----TTTT
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc----CCCC
Confidence 4578999999999998654 5679999754321 112233456777776553 2 3455555442 2234
Q ss_pred EEEecccCCC
Q 036266 227 YLSSCVMPNG 236 (312)
Q Consensus 227 ~l~~~~~~~g 236 (312)
+++||++++.
T Consensus 107 ~lvmE~L~~~ 116 (392)
T d2pula1 107 VTVMEDLSHL 116 (392)
T ss_dssp EEEECCCTTS
T ss_pred EEEEeccCCc
Confidence 6778888754
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.55 E-value=1.1e-05 Score=61.46 Aligned_cols=89 Identities=17% Similarity=0.198 Sum_probs=63.7
Q ss_pred ccCCCCCEEeccCC-cCCcC----CCcCccCCCCCCEEeCCCCcCCC----CCCccccCCCCCCEEeccCCccCCCcc--
Q 036266 23 QNLKVLIGLDLSIN-RLYGD----IPITISGLKDLTTLFLAGNRSQG----SIPKSFESLASLEFLDLSSNNLSGKIP-- 91 (312)
Q Consensus 23 ~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p-- 91 (312)
.+.++|+.|+|+++ .+... +-..+...++|++|+|++|.+.. .+...+...++|+.|+|++|.++..--
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45688999999974 45431 33446667889999999998873 233445567899999999999974322
Q ss_pred --hhHhhcCCCcEEEeeCceee
Q 036266 92 --KSLEALSNLKELNVSYNRLE 111 (312)
Q Consensus 92 --~~~~~l~~L~~L~l~~N~~~ 111 (312)
..+...++|++|++++|.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHHhCCcCCEEECCCCcCC
Confidence 23455578999999888654
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=0.00023 Score=59.82 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=29.6
Q ss_pred EEEEEEEEcCCcEEEEEEeehhhhHhHHHHHHHHHHhhcCC
Q 036266 167 GSVYKWIFLDETNVAIKVFNLQLERAFRSFDSKCEVHKNVR 207 (312)
Q Consensus 167 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~ 207 (312)
-.||++..++|+.|++|+.+... ....++..|...+..|.
T Consensus 36 N~vy~v~~~dg~~~VlK~~rp~~-~s~~~i~~E~~~l~~L~ 75 (325)
T d1zyla1 36 NRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLV 75 (325)
T ss_dssp SEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHH
T ss_pred ceeEEEEcCCCCEEEEEEeCCCC-CCHHHHHHHHHHHHHHH
Confidence 47999998889999999987542 12355677887776664
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.28 E-value=0.00051 Score=57.23 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=28.4
Q ss_pred CCCceecCCCCCCeeeCCCCceEEccccchhh
Q 036266 260 STPMVHCDLKPSNNLLDEDMVAHVSDFNISKL 291 (312)
Q Consensus 260 ~~~iiHrDlkp~Nill~~~~~~kl~DFG~a~~ 291 (312)
..++||+|+.+.||+++++...-|.||+.+..
T Consensus 182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccccCCcchhhhhcccccceeEeccccccc
Confidence 46799999999999999888778999998765
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.72 E-value=0.0038 Score=53.55 Aligned_cols=71 Identities=10% Similarity=0.050 Sum_probs=42.7
Q ss_pred ceEeccCCcEEEEEEEEcCC--------cEEEEEEeehhhhHhHHHHHHHHHHhhcCCCCce-eeeeeeeeecccccEEE
Q 036266 158 WHLLGTESLGSVYKWIFLDE--------TNVAIKVFNLQLERAFRSFDSKCEVHKNVRHRNL-IKILTTIAILILKPWYL 228 (312)
Q Consensus 158 ~~~lg~G~~g~Vy~~~~~~~--------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~l 228 (312)
.+.++-|-.-.+|++...++ +.|.+++.-. ... .....+|..+++.+.-.++ .++++++. + .+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~~~-~idr~~E~~i~~~ls~~gl~Pkll~~~~--~----g~ 118 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-PET-ESHLVAESVIFTLLSERHLGPKLYGIFS--G----GR 118 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-CCC-HHHHHHHHHHHHHHHHTTSSSCEEEEET--T----EE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-cch-hhHHHHHHHHHHHHHhCCCCCeEEEEcC--C----ce
Confidence 35677788889999886432 4567776642 222 2345678888877753333 46666654 1 45
Q ss_pred EecccCCC
Q 036266 229 SSCVMPNG 236 (312)
Q Consensus 229 ~~~~~~~g 236 (312)
+++|+++.
T Consensus 119 I~efi~g~ 126 (395)
T d1nw1a_ 119 LEEYIPSR 126 (395)
T ss_dssp EECCCCEE
T ss_pred EEEEeccc
Confidence 56677653
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.29 E-value=0.00029 Score=53.04 Aligned_cols=86 Identities=12% Similarity=0.165 Sum_probs=63.7
Q ss_pred CCCcEEeecCCcccccC----ccccccCCCCCEEeccCCcCCcC----CCcCccCCCCCCEEeC--CCCcCCC----CCC
Q 036266 2 EYILQINLFSNSLSGSL----PSNIQNLKVLIGLDLSINRLYGD----IPITISGLKDLTTLFL--AGNRSQG----SIP 67 (312)
Q Consensus 2 ~~L~~l~l~~n~l~~~~----p~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l--~~n~l~~----~~p 67 (312)
++|++|+|++|.++..- -..+...+.|+.+++++|.+... +-..+...++|+.++| ++|.+.. .+.
T Consensus 46 ~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La 125 (166)
T d1io0a_ 46 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 125 (166)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHH
Confidence 67999999999987542 23456778999999999998643 3456677888987655 5666653 244
Q ss_pred ccccCCCCCCEEeccCCccC
Q 036266 68 KSFESLASLEFLDLSSNNLS 87 (312)
Q Consensus 68 ~~~~~l~~L~~L~l~~N~l~ 87 (312)
..+...++|+.|+++.+...
T Consensus 126 ~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 126 NMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeCcCCCCc
Confidence 55667899999999887653
|