Citrus Sinensis ID: 036398

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
MACKPICVCLLVTIIAGAIVGGILFAAKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSSQSVVTSLG
ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHcHHccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHHcccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEcccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHcccccccHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccEccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccccEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccccccccccccccccEEEEEEEccccccccccccccccccccccHHccHHHHHHHHHHHccccccccccc
MACKPICVCLLVTIIAGAIVGGILFAAKSmnkkgvepseshkHNYVAALKIAMQFFDIqksgklvnnqikwrgdsglkdgkevdldlskgmydagdavkfgfpLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLvnahpkdnvlyvqvgdaekdhkcwqrpesitdnkplfqinttapgsdvAAETAAALASASLvfkksdppysAKLLEHAKKLFIFADKYREYYSVSLPQVKkyynstgygdELLWAASWLYHATqeniykdyvvgseaeefadwgkpswfswdnkLAGVQVLLSRVYffhgkdntkLAKYQKSAQALMCTllpespsatsdrtngGLIWIAEWNALQHPVAVAFLASLYGdymeksdnenlecdektfkSEDLREFAKKQADyvlgdnpnsmsYLVGyskkfpkfvhhrgasipadattgckdgyqwlestkpnpneatgalvggpfmnetyidsrnnsmqgepttYNSALLVGLLSSLATSSQSVVTSLG
MACKPICVCLLVTIIAGAIVGGILFAAKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKLVNNQIkwrgdsglkdgkEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRpesitdnkplfqINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQadyvlgdnpNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSslatssqsvvtslg
MACKPICVCLLVTiiagaivggilfaaKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVaaetaaalasaslVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNsallvgllsslatssQSVVTSLG
**CKPICVCLLVTIIAGAIVGGILFAAK**************HNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESIT**KPLFQINT***********AAALASASLVFKK***PYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLL***********NGGLIWIAEWNALQHPVAVAFLASLYGDYM***************************ADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLE************LVGGPFM*******************NSALLVGLL***************
***KPICVCLLVTIIAGAIVGGILFAAKS*************HNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSSQ*******
MACKPICVCLLVTIIAGAIVGGILFAAKSM**********HKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLA***********
**CKPICVCLLVTIIAGAIVGGILFAAKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATS*********
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiii
iiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MACKPICVCLLVTIIAGAIVGGILFAAKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSSQSVVTSLG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query514 2.2.26 [Sep-21-2011]
Q9FXI9515 Endoglucanase 2 OS=Arabid yes no 0.885 0.883 0.654 1e-177
Q8LCP6525 Endoglucanase 10 OS=Arabi no no 0.970 0.950 0.605 1e-172
Q69SG5528 Endoglucanase 24 OS=Oryza yes no 0.974 0.948 0.563 1e-165
Q5Z9P8518 Endoglucanase 18 OS=Oryza no no 0.949 0.942 0.567 1e-159
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.891 0.731 0.465 1e-113
Q42059 620 Endoglucanase 6 OS=Arabid no no 0.887 0.735 0.456 1e-110
O48766525 Endoglucanase 11 OS=Arabi no no 0.926 0.906 0.432 1e-107
Q5NAT8 640 Endoglucanase 1 OS=Oryza no no 0.926 0.743 0.432 1e-105
Q9CAC1492 Endoglucanase 8 OS=Arabid no no 0.898 0.939 0.438 1e-105
Q6L4I2 629 Endoglucanase 15 OS=Oryza no no 0.924 0.755 0.434 1e-104
>sp|Q9FXI9|GUN2_ARATH Endoglucanase 2 OS=Arabidopsis thaliana GN=At1g19940 PE=2 SV=1 Back     alignment and function desciption
 Score =  622 bits (1603), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 301/460 (65%), Positives = 373/460 (81%), Gaps = 5/460 (1%)

Query: 40  SHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVK 99
           S+  NY  ALKIAMQFFDIQKSGKL NN+I WRGDSGLKDG E  +DLSKG+YDAGD +K
Sbjct: 44  SNVKNYANALKIAMQFFDIQKSGKLENNEISWRGDSGLKDGSEASIDLSKGLYDAGDHMK 103

Query: 100 FGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVG 159
           FGFP+AFTAT+LSW+ILE G +M    ++ L  AKDS+KW TD+L+NAHP  NVLY+QVG
Sbjct: 104 FGFPMAFTATVLSWSILEYGDQMA--SLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVG 161

Query: 160 DAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLL 219
           D   DHKCW RPE++T  + L +I+T  PG++VAAETAAA+A+ASLVFK+SD  YS+ LL
Sbjct: 162 DPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVAAETAAAMAAASLVFKESDTKYSSTLL 221

Query: 220 EHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGS 279
           +HAK+LF FAD  R  YSV++P+V+ YYNSTGYGDELLWAASWLYHAT++  Y D+V   
Sbjct: 222 KHAKQLFDFADNNRGSYSVNIPEVQSYYNSTGYGDELLWAASWLYHATEDQTYLDFV-SE 280

Query: 280 EAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFH-GKDNTK-LAKYQKSAQALMCTLLPE 337
             EEF ++G PSWFSWDNKL G  +LLSR+ FF  G   +K L  ++++A+A+MC L+P 
Sbjct: 281 NGEEFGNFGSPSWFSWDNKLPGTHILLSRLTFFKKGLSGSKGLQGFKETAEAVMCGLIPS 340

Query: 338 SPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLR 397
           SP+ATS RT+GGLIW++EWNALQHPV+ AFLA+LY DYM  S  + L C +++FK  DLR
Sbjct: 341 SPTATSSRTDGGLIWVSEWNALQHPVSSAFLATLYSDYMLTSGVKELSCSDQSFKPSDLR 400

Query: 398 EFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPN 457
           +FA+ QADY+LG NP  MSYLVGY +K+P+FVHHRGASIPADATTGCKDG++WL S +PN
Sbjct: 401 KFARSQADYMLGKNPEKMSYLVGYGEKYPEFVHHRGASIPADATTGCKDGFKWLNSDEPN 460

Query: 458 PNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVG 497
           PN A GALVGGPF+N+T+ID+RNNSMQ EP+TYNSAL+VG
Sbjct: 461 PNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYNSALVVG 500

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q8LCP6|GUN10_ARATH Endoglucanase 10 OS=Arabidopsis thaliana GN=At1g75680 PE=2 SV=2 Back     alignment and function description
>sp|Q69SG5|GUN24_ORYSJ Endoglucanase 24 OS=Oryza sativa subsp. japonica GN=Os09g0533900 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z9P8|GUN18_ORYSJ Endoglucanase 18 OS=Oryza sativa subsp. japonica GN=Os06g0715300 PE=2 SV=1 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function description
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT8|GUN1_ORYSJ Endoglucanase 1 OS=Oryza sativa subsp. japonica GN=GLU7 PE=2 SV=1 Back     alignment and function description
>sp|Q9CAC1|GUN8_ARATH Endoglucanase 8 OS=Arabidopsis thaliana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query514
357466913535 Endoglucanase [Medicago truncatula] gi|3 0.966 0.928 0.629 0.0
356509613529 PREDICTED: endoglucanase 24-like [Glycin 0.966 0.939 0.630 0.0
356518028529 PREDICTED: endoglucanase 24-like [Glycin 0.966 0.939 0.623 0.0
119507459526 cellulase2 [Pyrus communis] 0.916 0.895 0.676 0.0
315419011526 EG [Gossypium hirsutum] 0.968 0.946 0.649 0.0
449437218523 PREDICTED: endoglucanase 2-like [Cucumis 0.980 0.963 0.630 0.0
255538902523 endo-1,4-beta-glucanase, putative [Ricin 0.916 0.900 0.671 0.0
225458016525 PREDICTED: endoglucanase 24 [Vitis vinif 0.904 0.885 0.683 0.0
429326614523 korrigan [Populus tomentosa] 0.972 0.956 0.637 0.0
224085835523 predicted protein [Populus trichocarpa] 0.972 0.956 0.631 0.0
>gi|357466913|ref|XP_003603741.1| Endoglucanase [Medicago truncatula] gi|355492789|gb|AES73992.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/526 (62%), Positives = 404/526 (76%), Gaps = 29/526 (5%)

Query: 7   CVCLLVTIIAGAIVGGILFAAKSMNKKGVEPSESHK------------HNYVAALKIAMQ 54
           C   +  +I   +VG I++A K    K ++ S S K              Y +ALK AMQ
Sbjct: 12  CGWFIAFVILALVVGAIVYAVK----KKIDNSNSDKPEPVPGPPGAIDQKYASALKTAMQ 67

Query: 55  FFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWT 114
           FFD+QKSGKL NN+I WRGDS LKDGK+ DLDL+KGMYDAGD +KFGFP+AFTA++LSW 
Sbjct: 68  FFDVQKSGKLENNKISWRGDSALKDGKQADLDLTKGMYDAGDHMKFGFPMAFTASVLSWA 127

Query: 115 ILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESI 174
           ILE G +M  + V QL+ A+DS++WITD+LVNAHP +NVLY+QVGD   DHKCW RPE I
Sbjct: 128 ILEYGDQM--DAVGQLEPAQDSLRWITDFLVNAHPSENVLYIQVGDPVADHKCWNRPELI 185

Query: 175 TDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYRE 234
           T+ +PL Q+N + PGSDVAAETAAA+ASASLVFKKSD  YS+ LL+HAK+LF FADK+R 
Sbjct: 186 TEERPLLQVNVSCPGSDVAAETAAAMASASLVFKKSDATYSSTLLKHAKQLFTFADKHRG 245

Query: 235 YYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFS 294
            YS ++P+V  YYNSTGYGDELLWAA+WLYHAT ++ Y  YV G   E++A +G P+WFS
Sbjct: 246 IYSENIPEVATYYNSTGYGDELLWAATWLYHATGDDSYLQYVTGQNGEDYAQFGSPTWFS 305

Query: 295 WDNKLAGVQVLLSRVYFFHGKD-----NTKLAKYQKSAQALMCTLLPESPSATSDRTNG- 348
           WDNKLAG QVLLSRV FF  K       + L  Y+KSA+A+MC LLP+SP+AT  RT+  
Sbjct: 306 WDNKLAGTQVLLSRVSFFKAKGLSSSFGSGLQNYRKSAEAVMCGLLPDSPTATKSRTDSN 365

Query: 349 -----GLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQ 403
                GLIW++EWNALQHPVA AFLAS+Y DYM  +   N++CD  +FK  DLR+FA+ Q
Sbjct: 366 VLLEYGLIWVSEWNALQHPVASAFLASVYSDYMLTTQTPNIKCDSDSFKPSDLRDFARSQ 425

Query: 404 ADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEATG 463
           ADYVLG NP  MS+LVGY K FP+FVHHRGASIPA+A TGCKDG+QWL+S+ PNPN ATG
Sbjct: 426 ADYVLGKNPQHMSFLVGYGKNFPQFVHHRGASIPANAKTGCKDGWQWLDSSDPNPNVATG 485

Query: 464 ALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSSQSV 509
           ALVGGPF+NETYIDSRNNSMQGEP+TYNSA++VGLLSSL T+S ++
Sbjct: 486 ALVGGPFLNETYIDSRNNSMQGEPSTYNSAVIVGLLSSLVTTSSAL 531

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356509613|ref|XP_003523541.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|356518028|ref|XP_003527686.1| PREDICTED: endoglucanase 24-like [Glycine max] Back     alignment and taxonomy information
>gi|119507459|dbj|BAF42037.1| cellulase2 [Pyrus communis] Back     alignment and taxonomy information
>gi|315419011|gb|ADU15552.1| EG [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|449437218|ref|XP_004136389.1| PREDICTED: endoglucanase 2-like [Cucumis sativus] gi|449505733|ref|XP_004162553.1| PREDICTED: endoglucanase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255538902|ref|XP_002510516.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223551217|gb|EEF52703.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225458016|ref|XP_002276739.1| PREDICTED: endoglucanase 24 [Vitis vinifera] gi|302142640|emb|CBI19843.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|429326614|gb|AFZ78647.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|224085835|ref|XP_002307711.1| predicted protein [Populus trichocarpa] gi|222857160|gb|EEE94707.1| predicted protein [Populus trichocarpa] gi|347466553|gb|AEO97189.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466607|gb|AEO97216.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query514
TAIR|locus:2035384515 GH9B5 "glycosyl hydrolase 9B5" 0.873 0.871 0.627 4e-161
TAIR|locus:2005599525 GH9B7 "glycosyl hydrolase 9B7" 0.861 0.843 0.631 8.6e-159
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.861 0.707 0.447 1.6e-102
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.861 0.714 0.439 2.7e-100
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.857 0.703 0.436 7.1e-100
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.861 0.843 0.436 2.8e-98
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.857 0.9 0.413 2e-95
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.852 0.848 0.427 2e-95
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.846 0.898 0.430 6.8e-95
TAIR|locus:2033600492 GH9B1 "glycosyl hydrolase 9B1" 0.867 0.906 0.418 1.3e-93
TAIR|locus:2035384 GH9B5 "glycosyl hydrolase 9B5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1569 (557.4 bits), Expect = 4.0e-161, P = 4.0e-161
 Identities = 285/454 (62%), Positives = 354/454 (77%)

Query:    40 SHKHNYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVK 99
             S+  NY  ALKIAMQFFDIQKSGKL NN+I WRGDSGLKDG E  +DLSKG+YDAGD +K
Sbjct:    44 SNVKNYANALKIAMQFFDIQKSGKLENNEISWRGDSGLKDGSEASIDLSKGLYDAGDHMK 103

Query:   100 FGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVG 159
             FGFP+AFTAT+LSW+ILE G +M    ++ L  AKDS+KW TD+L+NAHP  NVLY+QVG
Sbjct:   104 FGFPMAFTATVLSWSILEYGDQMA--SLNLLDHAKDSLKWTTDFLINAHPSPNVLYIQVG 161

Query:   160 DAEKDHKCWQRPESITDNKPLFQINTTAPGSDVXXXXXXXXXXXXXVFKKSDPPYSAKLL 219
             D   DHKCW RPE++T  + L +I+T  PG++V             VFK+SD  YS+ LL
Sbjct:   162 DPVTDHKCWDRPETMTRKRTLTKIDTKTPGTEVAAETAAAMAAASLVFKESDTKYSSTLL 221

Query:   220 EHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGS 279
             +HAK+LF FAD  R  YSV++P+V+ YYNSTGYGDELLWAASWLYHAT++  Y D+V   
Sbjct:   222 KHAKQLFDFADNNRGSYSVNIPEVQSYYNSTGYGDELLWAASWLYHATEDQTYLDFV-SE 280

Query:   280 EAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFH-GKDNTK-LAKYQKSAQALMCTLLPE 337
               EEF ++G PSWFSWDNKL G  +LLSR+ FF  G   +K L  ++++A+A+MC L+P 
Sbjct:   281 NGEEFGNFGSPSWFSWDNKLPGTHILLSRLTFFKKGLSGSKGLQGFKETAEAVMCGLIPS 340

Query:   338 SPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLR 397
             SP+ATS RT+GGLIW++EWNALQHPV+ AFLA+LY DYM  S  + L C +++FK  DLR
Sbjct:   341 SPTATSSRTDGGLIWVSEWNALQHPVSSAFLATLYSDYMLTSGVKELSCSDQSFKPSDLR 400

Query:   398 EFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPN 457
             +FA+ QADY+LG NP  MSYLVGY +K+P+FVHHRGASIPADATTGCKDG++WL S +PN
Sbjct:   401 KFARSQADYMLGKNPEKMSYLVGYGEKYPEFVHHRGASIPADATTGCKDGFKWLNSDEPN 460

Query:   458 PNEATGALVGGPFMNETYIDSRNNSMQGEPTTYN 491
             PN A GALVGGPF+N+T+ID+RNNSMQ EP+TYN
Sbjct:   461 PNVAYGALVGGPFLNDTFIDARNNSMQNEPSTYN 494
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2005599 GH9B7 "glycosyl hydrolase 9B7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2033600 GH9B1 "glycosyl hydrolase 9B1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FXI9GUN2_ARATH3, ., 2, ., 1, ., 40.65430.88520.8834yesno
Q69SG5GUN24_ORYSJ3, ., 2, ., 1, ., 40.56390.97470.9488yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query514
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 1e-169
PLN02171 629 PLN02171, PLN02171, endoglucanase 1e-158
PLN02340 614 PLN02340, PLN02340, endoglucanase 1e-157
PLN00119489 PLN00119, PLN00119, endoglucanase 1e-151
PLN02266510 PLN02266, PLN02266, endoglucanase 1e-146
PLN02613498 PLN02613, PLN02613, endoglucanase 1e-145
PLN02308492 PLN02308, PLN02308, endoglucanase 1e-145
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-144
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-134
PLN03009495 PLN03009, PLN03009, cellulase 1e-133
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-132
pfam10715142 pfam10715, REGB_T4, Endoribonuclease RegB T4-bacte 0.004
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information 
 Score =  809 bits (2092), Expect = 0.0
 Identities = 320/471 (67%), Positives = 380/471 (80%), Gaps = 8/471 (1%)

Query: 48  ALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFT 107
           ALKIA+QFFDIQKSGKL NN I WRGDS L DG +  LDLSKGMYDAGD +KFGFP+AFT
Sbjct: 1   ALKIALQFFDIQKSGKLENNPIPWRGDSALLDGSDAGLDLSKGMYDAGDHMKFGFPMAFT 60

Query: 108 ATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKC 167
           AT+LSW+ILE G    M   +QL  AKDS+KWITDYL+NAHP +NVLY+QVGD + DHKC
Sbjct: 61  ATVLSWSILEYGD--QMNAANQLDSAKDSLKWITDYLINAHPSENVLYIQVGDPKLDHKC 118

Query: 168 WQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFI 227
           W+RPE++ + +PL +INT++PGS+VAAETAAA+A+ASLVFK SD  YS  LL+HAK+LF 
Sbjct: 119 WERPETMDEKRPLTKINTSSPGSEVAAETAAAMAAASLVFKSSDSTYSDTLLKHAKQLFN 178

Query: 228 FADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADW 287
           FADKYR  YS S+P+V+ YYNSTGYGDELLWAASWLYHAT +  Y  YV G   +EFADW
Sbjct: 179 FADKYRGSYSESIPEVQDYYNSTGYGDELLWAASWLYHATGDKTYLAYVTGKNGKEFADW 238

Query: 288 GKPSWFSWDNKLAGVQVLLSRVYFFHGKD-----NTKLAKYQKSAQALMCTLLPESPSAT 342
           G P+WFSWD+KLAG QVLLSR+ FF  K      N+ L  Y+K+A+A+MC LLP+SP+AT
Sbjct: 239 GSPTWFSWDDKLAGTQVLLSRLTFFGPKGASNTVNSGLQMYKKTAEAVMCGLLPDSPTAT 298

Query: 343 SDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKK 402
           + RT+GGLIW++EWNALQH V  AFLA LY DYM  S    L C  K+FK  DLR+FAK 
Sbjct: 299 TSRTDGGLIWVSEWNALQHAVNSAFLAVLYSDYMLSSGIAKLSCSGKSFKPSDLRKFAKS 358

Query: 403 QADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEAT 462
           QADY+LG NP  MSYLVGY  K+P++VHHRGASIPADA TGCKDG++WL S++PNPN AT
Sbjct: 359 QADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPADAKTGCKDGFKWLHSSEPNPNVAT 418

Query: 463 GALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSSQSVVTSL 513
           GALVGGPF N+T++DSR+NSMQ EPTTYNSALLVGLLSSL T+S SV+ S 
Sbjct: 419 GALVGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTTS-SVLQSF 468

Length = 469
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information
>gnl|CDD|220857 pfam10715, REGB_T4, Endoribonuclease RegB T4-bacteriophage encoded Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 514
PLN02420525 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.12
COG1331667 Highly conserved protein containing a thioredoxin 96.64
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.39
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 95.06
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 93.96
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 92.77
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 86.85
>PLN02420 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=1.2e-126  Score=1016.58  Aligned_cols=491  Identities=43%  Similarity=0.791  Sum_probs=442.6

Q ss_pred             hhHHHHH-HHHHHHHHHHHHHHHHhhhcccCCCCCCCCChhhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCC
Q 036398            4 KPICVCL-LVTIIAGAIVGGILFAAKSMNKKGVEPSESHKHNYVAALKIAMQFFDIQKSGKL-VNNQIKWRGDSGLKDGK   81 (514)
Q Consensus         4 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~Y~~~l~~sl~fy~~QRsG~~-~~~~~~wr~~s~l~Dg~   81 (514)
                      ||-|.|| ++..+++.|..++.+.+.        ||.|++++|.++|++||+||++||||++ .+++++||++||+.||.
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~Y~~al~~sl~Fy~~QRsG~lp~~~~~~Wr~~s~~~Dg~   79 (525)
T PLN02420          8 HKPCHFLLLLLLLITVFSAALAGVSS--------ETDVGRFDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGL   79 (525)
T ss_pred             cchHHHHHHHHHHHHHHhhccccccc--------cccCCcccHHHHHHHHHHHHHHhcCCCCCcCCCCcccccCcCcCCC
Confidence            5667754 445556665545444333        8889999999999999999999999999 78899999999999999


Q ss_pred             CcccccccccccCCCCcccccchHHHHHHHHHHHHHhHHhhcCcCCCchHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCC
Q 036398           82 EVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDA  161 (514)
Q Consensus        82 ~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~w~~~ef~~~~~~Es~~~~pdiLde~kwg~D~llk~~~~~g~~y~~Vg~~  161 (514)
                      +.++||+|||||||||+||++|+|+|+++|+|+++||++.|..  .+++||+||||||++|||||||+.++.+|+|||++
T Consensus        80 ~~~~DlsGGwyDAGD~~Kf~~p~a~t~~~L~w~~~ef~d~~~~--~g~~~d~Ldeikw~lD~llk~~~~~~~~~~qvGdg  157 (525)
T PLN02420         80 EQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDQLAS--TGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDG  157 (525)
T ss_pred             cCcccCCCcceecCccceecchHHHHHHHHHHHHHHHHHhhhh--cCCcHHHHHHHHHHHHHHHHhCcCCCceEEeeCCC
Confidence            9999999999999999999999999999999999999999987  88999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCceeecCCCCCchHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCccccCCc
Q 036398          162 EKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLP  241 (514)
Q Consensus       162 ~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~  241 (514)
                      ..||.+|++||+++.+|++|.++.++|+|++++++|||||+||||||++||+||++||++||++|+||+++|+.|.++.+
T Consensus       158 ~~DH~~w~~Pe~~~~~R~~~~i~~~~pgsd~aa~~AAALA~AS~vfk~~D~~YA~~~L~~Ak~ly~fA~~~~g~y~~~~~  237 (525)
T PLN02420        158 DTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLK  237 (525)
T ss_pred             CcccccccChhhccccCceEEecCCCCccHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHhcCCccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999977666


Q ss_pred             ccccccCC-CCCCcHHHHHHHHHHHHcCcchhHHHHHhchhhhccCCCC-CCcccccchhhHHHHHhcccccccC-c-ch
Q 036398          242 QVKKYYNS-TGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGK-PSWFSWDNKLAGVQVLLSRVYFFHG-K-DN  317 (514)
Q Consensus       242 ~~~g~Y~~-~~~~De~~wAAa~Ly~aTgd~~Yl~~a~~~~~~~~~~~~~-~~~~~Wd~~~~g~~~lla~~~~~~~-~-~~  317 (514)
                      ...++|++ ++|.||++|||+|||+||||+.|++++.+... .++...+ ...|+||++..|+++||++....+. + .+
T Consensus       238 ~~~g~Y~s~s~y~DEl~WAAawLY~ATgd~~Yl~~a~~~~~-~~~~~~~~~~~~~WD~k~~G~~~Lla~~~~~~~~~~~~  316 (525)
T PLN02420        238 VVKSYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAH-QLGGLSWAMSEFSWDVKYAGVQLLASMLLKEEKHKQHS  316 (525)
T ss_pred             ccCCCCCCcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH-hcCCccccCcccCCcccHHHHHHHHHHHhccccccchh
Confidence            77899998 88999999999999999999999999988654 3332221 3569999999999999887432221 1 24


Q ss_pred             HHHHHHHHHHHHHHHHhcCCC-CCCcccCCCCcceeecCCccchHHHHHHHHHHHHhhhhccccCCccccccccCChHHH
Q 036398          318 TKLAKYQKSAQALMCTLLPES-PSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDL  396 (514)
Q Consensus       318 ~~~~~~~~~ad~~~~~~~~~~-~~~~~~~t~~g~~~~~~wg~~~~~~n~a~l~~~~~~~l~~~~~~~~~~~~~~~~~~~y  396 (514)
                      ..++.|++.+|.++|.+++++ +...+.+||+|+.|..+|||+||++|+||++++|+++++. +++.+.|++......+|
T Consensus       317 ~~l~~y~~~ad~~~~~~~~~~~~~~~~~~TpgGl~~~~~Wgs~ryaan~afla~vya~~l~~-~~~~~~c~~~~~~~~~~  395 (525)
T PLN02420        317 KVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRK-SNTDLECHEGTVTPDEM  395 (525)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCCcccccCCeeEEeCCCCchHHHHHHHHHHHHHHHHhhh-cccccccCCCCCCHHHH
Confidence            677889999999999887764 3346789999999999999999999999999999999876 56779999888889999


Q ss_pred             HHHHHHhchhhcCCCCCCCceEeecCCCCCCCccccCCCCCC----CCCCCCCCCc-ccccCCCCCCCCCCCccccCCCC
Q 036398          397 REFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPA----DATTGCKDGY-QWLESTKPNPNEATGALVGGPFM  471 (514)
Q Consensus       397 ~~~a~~qidYiLG~NP~~~SyV~G~G~~~p~~pHHR~s~~~~----~~~~~c~~g~-~~~~~~~p~~~~l~GalvGGP~~  471 (514)
                      ++||++|||||||+||+++|||||||.|+|++||||.+|||.    +..++|.+|| +|++.+.|||++|+||||||||.
T Consensus       396 ~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GALVGGPd~  475 (525)
T PLN02420        396 LGFAKSQIDYILGSNPMETSYLVGYGPKYPTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDC  475 (525)
T ss_pred             HHHHHHhhhhhccCCCCCCceEeccCCCCCCCccccccCCCccccccccccCcccccccccCCCCCcccccCceecCCCC
Confidence            999999999999999999999999999999999999999986    3457999999 59999999999999999999999


Q ss_pred             CCcccccCCccccCcccccCchHHHHHHHHhhccC
Q 036398          472 NETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSS  506 (514)
Q Consensus       472 ~d~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~~  506 (514)
                      +|.|+|+|.+|++|||+|||||+||++||+|....
T Consensus       476 ~D~y~D~r~~y~~nE~~~~~nA~~vg~lA~L~~~~  510 (525)
T PLN02420        476 QDNFDDRRGNYVQTEACTYNTAPLVGVFARLIELE  510 (525)
T ss_pred             CCCcccccccccccccchhhhhHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999764

>PLN02340 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query514
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 3e-74
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 2e-73
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 7e-62
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 8e-58
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 5e-55
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 6e-55
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 3e-53
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 6e-44
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  276 bits (705), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/453 (35%), Positives = 240/453 (52%), Gaps = 41/453 (9%)
Query: 43  HNYVAALKIAMQFFDIQKSGKLVNNQ-IKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFG 101
           ++Y   L+ ++ F++ Q+SG+L  +Q + WR DS L D  +   DL+ G +DAGD VKFG
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62
Query: 102 FPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDA 161
           FP+A+TAT+L+W +++     G      L   + +VKW TDY + AH   N  Y QVG  
Sbjct: 63  FPMAYTATVLAWGLIDF--EAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQG 120
Query: 162 EKDHKCWQRPESITDNKPLFQINTTAPGSDVXXXXXXXXXXXXXVFKKSDPPYSAKLLEH 221
           + DH  W RPE +T  +P ++I+T+ PGSD+             VF+  D  YS  LL H
Sbjct: 121 DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTH 180
Query: 222 AKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEA 281
           A++LF FA+ YR  YS S+   + +Y S  Y DEL+WAA+WLY AT +N Y +    S  
Sbjct: 181 ARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLN-TAESLY 239
Query: 282 EEFA--DWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESP 339
           +EF   +WG     +WD+K++GVQVLL+++        T    Y+ + Q+ +  L+    
Sbjct: 240 DEFGLQNWGGG--LNWDSKVSGVQVLLAKL--------TNKQAYKDTVQSYVNYLINN-- 287
Query: 340 SATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREF 399
                +T  GL++I  W  L+H    AF+               LE  E    +   R+F
Sbjct: 288 ---QQKTPKGLLYIDMWGTLRHAANAAFIM--------------LEAAELGLSASSYRQF 330
Query: 400 AKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPN 459
           A+ Q DY LGD     S++ G+    P   HHR +S P    T C   +    S  PN +
Sbjct: 331 AQTQIDYALGD--GGRSFVCGFGSNPPTRPHHRSSSCPPAPAT-CD--WNTFNSPDPNYH 385
Query: 460 EATGALVGGPFMNETYIDSRNNSMQGE-PTTYN 491
             +GALVGGP  N+ Y+D R++ +  E  T YN
Sbjct: 386 VLSGALVGGPDQNDNYVDDRSDYVHNEVATDYN 418
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query514
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-161
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-157
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-155
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-155
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-153
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-147
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-139
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-129
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-120
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 4e-67
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  464 bits (1195), Expect = e-161
 Identities = 167/462 (36%), Positives = 250/462 (54%), Gaps = 36/462 (7%)

Query: 43  HNYVAALKIAMQFFDIQKSGKLV-NNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFG 101
           ++Y   L+ ++ F++ Q+SG+L  + ++ WR DS L D  +   DL+ G +DAGD VKFG
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62

Query: 102 FPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDA 161
           FP+A+TAT+L+W +++     G      L   + +VKW TDY + AH   N  Y QVG  
Sbjct: 63  FPMAYTATVLAWGLIDFEA--GYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQG 120

Query: 162 EKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEH 221
           + DH  W RPE +T  +P ++I+T+ PGSD+A ETAAALA+AS+VF+  D  YS  LL H
Sbjct: 121 DADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTH 180

Query: 222 AKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEA 281
           A++LF FA+ YR  YS S+   + +Y S  Y DEL+WAA+WLY AT +N Y +    S  
Sbjct: 181 ARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAE-SLY 239

Query: 282 EEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSA 341
           +EF         +WD+K++GVQVLL+++        T    Y+ + Q+ +  L+      
Sbjct: 240 DEFGLQNWGGGLNWDSKVSGVQVLLAKL--------TNKQAYKDTVQSYVNYLINNQQ-- 289

Query: 342 TSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAK 401
              +T  GL++I  W  L+H    AF+     +                  +   R+FA+
Sbjct: 290 ---KTPKGLLYIDMWGTLRHAANAAFIMLEAAELG--------------LSASSYRQFAQ 332

Query: 402 KQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTKPNPNEA 461
            Q DY LGD     S++ G+    P   HHR +S P    T     +    S  PN +  
Sbjct: 333 TQIDYALGDGG--RSFVCGFGSNPPTRPHHRSSSCPPAPATC---DWNTFNSPDPNYHVL 387

Query: 462 TGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLA 503
           +GALVGGP  N+ Y+D R++ +  E  T  +A     L++L 
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALV 429
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query514
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.72
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.34
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.66
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.33
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.06
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 92.79
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 92.25
1nc5_A373 Hypothetical protein YTER; structural genomics, he 92.11
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 91.81
3k11_A445 Putative glycosyl hydrolase; structural genomics, 91.41
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 90.65
3pmm_A382 Putative cytoplasmic protein; structural genomics, 89.3
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 83.81
3k11_A445 Putative glycosyl hydrolase; structural genomics, 80.71
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
Probab=100.00  E-value=1.6e-115  Score=926.74  Aligned_cols=429  Identities=39%  Similarity=0.703  Sum_probs=390.5

Q ss_pred             hhhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCcccccccccccCCCCcccccchHHHHHHHHHHHHHhHH
Q 036398           42 KHNYVAALKIAMQFFDIQKSGKL-VNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQ  120 (514)
Q Consensus        42 ~~~Y~~~l~~sl~fy~~QRsG~~-~~~~~~wr~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~w~~~ef~~  120 (514)
                      .++|.++|++||+||++||||++ ++++++||++||++||++.++||+|||||||||+||++|+++|+++|+|+++||++
T Consensus         2 ~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~wr~ds~l~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~~~   81 (433)
T 1ks8_A            2 AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEA   81 (433)
T ss_dssp             CCCHHHHHHHHHHHHHHTBCBSCCTTCSCTTCCCBCTTCBCTTCCBCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHTHH
T ss_pred             CCcHHHHHHHHHHHHHHHcCCCCCcccCCCcCCcccccCCCcCcccCCCceeECCCCCeeccchHHHHHHHHHHHHHhHH
Confidence            47899999999999999999999 78999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCcCCCchHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCCCceeecCCCCCchHHHHHHHHHH
Q 036398          121 RMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAAL  200 (514)
Q Consensus       121 ~~~~Es~~~~pdiLde~kwg~D~llk~~~~~g~~y~~Vg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAal  200 (514)
                      .|..  +|++||+|||||||+|||||||+.+|.||+|||++..||.+|++||+++++|++|+++.++|+|++++++||||
T Consensus        82 ~~~~--~~~~~d~ldeikwg~D~llk~~~~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAal  159 (433)
T 1ks8_A           82 GYSS--AGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAAL  159 (433)
T ss_dssp             HHHH--TTCHHHHHHHHHHHHHHHHHHCCBTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHH
T ss_pred             hhhc--CCchHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHH
Confidence            9987  99999999999999999999999999999999999999999999999999999999998899999999999999


Q ss_pred             HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCccccCCcccccccCCCCCCcHHHHHHHHHHHHcCcchhHHHHHhch
Q 036398          201 ASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSE  280 (514)
Q Consensus       201 A~as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAa~Ly~aTgd~~Yl~~a~~~~  280 (514)
                      |+||||||++||+||++||++||++|+||++||+.|.++.+..+++|+|+++.||++|||+|||+|||+++|++++++++
T Consensus       160 A~as~vfk~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE~~WAAa~Ly~aTgd~~Yl~~~~~~~  239 (433)
T 1ks8_A          160 AAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDELVWAAAWLYRATNDNTYLNTAESLY  239 (433)
T ss_dssp             HHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred             HHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987666678999999999999999999999999999999999876


Q ss_pred             hhhccCCCCCCcccccchhhHHHHHhcccccccCcchHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCcceeecCCccch
Q 036398          281 AEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIAEWNALQ  360 (514)
Q Consensus       281 ~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~~~~~wg~~~  360 (514)
                      . ++........|+||++..|++++|++.  +. +     +.|++.++.+++.++.     .+.+||+|+.|...||+++
T Consensus       240 ~-~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~-~-----~~~~~~~~~~~~~~~~-----~~~~tp~Gl~~~~~WGs~~  305 (433)
T 1ks8_A          240 D-EFGLQNWGGGLNWDSKVSGVQVLLAKL--TN-K-----QAYKDTVQSYVNYLIN-----NQQKTPKGLLYIDMWGTLR  305 (433)
T ss_dssp             H-HTTGGGSCCCCCSSCCHHHHHHHHHHH--HC-C-----HHHHHHHHHHHHHHHH-----TSCBCTTSCBCCCSTTHHH
T ss_pred             H-hcCcCcCcCCcCccchhhHHHHHHhhc--cC-h-----HHHHHHHHHHHHHHHh-----cCCcCCCCceeecCCchhH
Confidence            4 333222346799999999999888762  32 1     3456666666665542     2467899999989999999


Q ss_pred             HHHHHHHHHHHHhhhhccccCCccccccccCChHHHHHHHHHhchhhcCCCCCCCceEeecCCCCCCCccccCCCCCCCC
Q 036398          361 HPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADA  440 (514)
Q Consensus       361 ~~~n~a~l~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~~SyV~G~G~~~p~~pHHR~s~~~~~~  440 (514)
                      |++|.||++++++++-.              ++.+|+++|++|||||||+|  ++|||||||+|+|++||||++++|. .
T Consensus       306 ~~~n~a~l~~~~~~~~~--------------~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~-~  368 (433)
T 1ks8_A          306 HAANAAFIMLEAAELGL--------------SASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPP-A  368 (433)
T ss_dssp             HHHHHHHHHHHHHHTTS--------------SHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCC-T
T ss_pred             HHHHHHHHHHHHHhcCC--------------CHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCC-c
Confidence            99999999999988512              47899999999999999998  7899999999999999999999986 3


Q ss_pred             CCCCCCCcccccCCCCCCCCCCCccccCCCCCCcccccCCccccCcccccCchHHHHHHHHhhcc
Q 036398          441 TTGCKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATS  505 (514)
Q Consensus       441 ~~~c~~g~~~~~~~~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~  505 (514)
                      |.+|++|  +.+++.|||++|+|+||||||..|+|+|+|.+|++|||||||||+||++||+|...
T Consensus       369 ~~~c~~~--~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~  431 (433)
T 1ks8_A          369 PATCDWN--TFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL  431 (433)
T ss_dssp             TSCCSHH--HHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccccccc--ccCCCCCCCCCCccceecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence            5689755  57888999999999999999999999999999999999999999999999999865
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 514
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-151
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-145
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-143
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-139
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-108
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-103
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  437 bits (1125), Expect = e-151
 Identities = 176/471 (37%), Positives = 248/471 (52%), Gaps = 37/471 (7%)

Query: 42  KHNYVAALKIAMQFFDIQKSGKLVNNQ-IKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKF 100
             NY  AL+ +M F++ Q+SGKL  N  + WRGDSGL DG +V LDL+ G YDAGD VKF
Sbjct: 3   AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKF 62

Query: 101 GFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGD 160
           GFP+AFTATML+W  +E  +  G     Q+   KD+++W+ DY + AHP  NVLYVQVGD
Sbjct: 63  GFPMAFTATMLAWGAIESPE--GYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGD 120

Query: 161 AEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLE 220
            + DHK W   E +   +P F+++ + PGSDVAAETAAA+A++S+VF   DP Y+A L++
Sbjct: 121 GDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQ 180

Query: 221 HAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVV--- 277
           HAK+L+ FAD YR  YS  +P    Y + +GY DEL+W A WLY AT ++ Y        
Sbjct: 181 HAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY 240

Query: 278 --GSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLL 335
              S  ++          +WD+K  G  VLL++         T   KY   A   +    
Sbjct: 241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE--------TGKQKYIDDANRWLDYWT 292

Query: 336 PESPSATSDRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSED 395
                     + GG+  +  W AL++    AF+A +Y   ++              + + 
Sbjct: 293 VGVNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP-----------VRKQR 341

Query: 396 LREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTGCKDGYQWLESTK 455
             +FA +Q +Y LGDNP + SY+VG+    P+  HHR A                + S  
Sbjct: 342 YHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS---------WTDSIASPA 392

Query: 456 PNPNEATGALVGGPF-MNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATS 505
            N +   GALVGGP   N+ Y D R + +  E  T  +A     L+ L   
Sbjct: 393 ENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query514
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.12
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 89.23
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 85.27
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 84.5
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 84.39
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 82.54
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=4.9e-107  Score=868.10  Aligned_cols=434  Identities=40%  Similarity=0.681  Sum_probs=383.3

Q ss_pred             hhhHHHHHHHHHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCcccccccccccCCCCcccccchHHHHHHHHHHHHHhHH
Q 036398           42 KHNYVAALKIAMQFFDIQKSGKL-VNNQIKWRGDSGLKDGKEVDLDLSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQ  120 (514)
Q Consensus        42 ~~~Y~~~l~~sl~fy~~QRsG~~-~~~~~~wr~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~w~~~ef~~  120 (514)
                      +++|.++|++||+||++||||.+ +.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++||+
T Consensus         3 ~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~~   82 (460)
T d1tf4a1           3 AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESPE   82 (460)
T ss_dssp             SSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCHH
T ss_pred             CCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHChH
Confidence            48999999999999999999999 78899999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCcCCCchHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCCCCCCCCCCCCCCCCCCceeecCCCCCchHHHHHHHHHH
Q 036398          121 RMGMEGVDQLQKAKDSVKWITDYLVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAAL  200 (514)
Q Consensus       121 ~~~~Es~~~~pdiLde~kwg~D~llk~~~~~g~~y~~Vg~~~~dh~~W~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAal  200 (514)
                      .|..  +|++||||||+|||+|||+|||+.+|.||+|||++..||+.|++|+.++.+|+.+.+....|+|++++++||||
T Consensus        83 ~~~~--~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAal  160 (460)
T d1tf4a1          83 GYIR--SGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAM  160 (460)
T ss_dssp             HHHH--TTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHH
T ss_pred             hhhc--CCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHH
Confidence            9987  99999999999999999999999999999999999999999999999999999998888889999999999999


Q ss_pred             HHhcccccCCCHHHHHHHHHHHHHHHHHHHHccCccccCCcccccccCCCCCCcHHHHHHHHHHHHcCcchhHHHHHhch
Q 036398          201 ASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQVKKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSE  280 (514)
Q Consensus       201 A~as~vf~~~D~~yA~~~l~~A~~~y~~a~~~~~~y~~~~~~~~g~Y~~~~~~De~~wAAa~Ly~aTgd~~Yl~~a~~~~  280 (514)
                      |+|||||+++||+||++||++||++|+||++||+.|.+..+....+|.++++.||++|||+|||++|||++|++++....
T Consensus       161 A~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~  240 (460)
T d1tf4a1         161 AASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (460)
T ss_dssp             HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCccccchHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            99999999999999999999999999999999999987665555567778999999999999999999999999999865


Q ss_pred             hhhcc-----CC-CCCCcccccchhhHHHHHhcccccccCcchHHHHHHHHHHHHHHHHhcCCCCCCcccCCCCcceeec
Q 036398          281 AEEFA-----DW-GKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATSDRTNGGLIWIA  354 (514)
Q Consensus       281 ~~~~~-----~~-~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~~~~  354 (514)
                      . .+.     .. .....++|+++..+..++|++.  ..      +..+++.++.+++.+.+......++++++++.|..
T Consensus       241 ~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (460)
T d1tf4a1         241 D-FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKE--TG------KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLD  311 (460)
T ss_dssp             G-GSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHH--HC------CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCC
T ss_pred             h-hcccccccccccccccccccchhHHHHHHHHHH--hh------hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecC
Confidence            3 111     11 1245689999988888777652  21      13455666666666554444345678899999999


Q ss_pred             CCccchHHHHHHHHHHHHhhhhccccCCccccccccCChHHHHHHHHHhchhhcCCCCCCCceEeecCCCCCCCccccCC
Q 036398          355 EWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGA  434 (514)
Q Consensus       355 ~wg~~~~~~n~a~l~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~a~~qidYiLG~NP~~~SyV~G~G~~~p~~pHHR~s  434 (514)
                      .||++++++|.+++++++++++..           ..++++|+++|++|||||||+||+++|||||||.|+|++||||.+
T Consensus       312 ~WGsn~~~~n~a~~~~~a~~~~~~-----------~~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s  380 (460)
T d1tf4a1         312 TWGALRYAANTAFVALVYAKVIDD-----------PVRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTA  380 (460)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHhcc-----------cCCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccc
Confidence            999999999999999999886532           113579999999999999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCCCCCCCccccCCC-CCCcccccCCccccCcccccCchHHHHHHHHhhccC
Q 036398          435 SIPADATTGCKDGYQWLESTKPNPNEATGALVGGPF-MNETYIDSRNNSMQGEPTTYNSALLVGLLSSLATSS  506 (514)
Q Consensus       435 ~~~~~~~~~c~~g~~~~~~~~p~~~~l~GalvGGP~-~~d~y~D~~~~y~~nEvaid~NA~lv~~la~l~~~~  506 (514)
                      +++.         .++...+.|||++++|+|||||| +.+||+|++++|++|||||||||+||++||+|++..
T Consensus       381 ~~~~---------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~  444 (460)
T d1tf4a1         381 HGSW---------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEY  444 (460)
T ss_dssp             HTCS---------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHH
T ss_pred             cCCC---------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            7763         12445678999999999999998 589999999999999999999999999999998873
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure