Citrus Sinensis ID: 036401
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Structural maintenance of chromosomes protein 1 | Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement (By similarity). Essential protein plant viability. Required for chromosome segregation (e.g. sister chromatid alignment) and cell division during embryogenesis. | probable | Q6Q1P4 |
| Structural maintenance of chromosomes protein 1A | Involved in chromosome cohesion during cell cycle and in DNA repair. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, and works as a downstream effector in the ATM/NBS1 branch of S-phase checkpoint (By similarity). Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint. | probable | Q9CU62 |
| Structural maintenance of chromosomes protein 1 | Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. | probable | P32908 |
Prediction of Enzyme Commission Number
No EC number assigned to the protein, probably not an enzyme!
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 1W1W, chain A Confidence level:very confident Coverage over the Query: 8-164 View the alignment between query and template View the model in PyMOL |
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Template: 1E69, chain A Confidence level:very confident Coverage over the Query: 1044-1109,1122-1153 View the alignment between query and template View the model in PyMOL |
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Template: 2WD5, chain A Confidence level:very confident Coverage over the Query: 504-630 View the alignment between query and template View the model in PyMOL |
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Template: 3KTA, chain B Confidence level:very confident Coverage over the Query: 992-1109,1122-1153 View the alignment between query and template View the model in PyMOL |
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Template: 3NA7, chain A Confidence level:confident Coverage over the Query: 425-448 View the alignment between query and template View the model in PyMOL |
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Template: 3ZGX, chain A Confidence level:confident Coverage over the Query: 953-1113,1127-1147 View the alignment between query and template View the model in PyMOL |
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Template: 2FXO, chain A Confidence level:probable Coverage over the Query: 254-352 View the alignment between query and template View the model in PyMOL |
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Template: 3HNW, chain A Confidence level:probable Coverage over the Query: 657-721 View the alignment between query and template View the model in PyMOL |
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Template: 2B9C, chain A Confidence level:probable Coverage over the Query: 306-361,390-464 View the alignment between query and template View the model in PyMOL |
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Template: 1SJJ, chain A Confidence level:probable Coverage over the Query: 610-1018 View the alignment between query and template View the model in PyMOL |
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Template: 1SJJ, chain A Confidence level:probable Coverage over the Query: 610-1018 View the alignment between query and template View the model in PyMOL |