Citrus Sinensis ID: 036418

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MAETANNPAPARAPEVVTTVTIPEEKGAKLEALPAPAPKAKNIPEEKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEcccccccccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccHHHHccccccccHHHHHHcccccccccccccccccccHHHHHHcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEEEEcccHcccEEccccccccccEEccHHHEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccccEEEEccccHHHHHHHcccccHHHHHHHHHHcccHHHHHHHccccccHHHHHHcccccccccccccccccccEEEcccEEccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccc
Coil and Loop (DISEMBL)
maetannpaparapevvttvtipeekgaklealpapapkaknipeeKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRdydcenllrlprlqtgIGIALLFMFIISTAalflrpkfpmpgfLLAVVPLLVMLTVGLALLgaydmesrkilasprwfklkvdnpnnwnniksciydtkicddlflksltvksydftmkklspiesgcctppavcgmkfvnatswikgdngavnntvpldsdcddenklldsdcdtwtndrnvlcydcqackdGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Flexible Loop (DISEMBL)
maetannpaparapevvtTVTIPEekgaklealpapapkakniPEEKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Low Complexity Region (SEG)
MAETANNPAPARAPEVVTTVTIPEEKGaklealpapapkaknipeekaIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPllvmltvglallgaYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKlglflvlmslflfvshlflflATMWELVVVKENI
Disordered region (IsUnstruct)
************************************************IIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVV****
Disordered Region (DISOPRED)
************APEVVTTVTIPEEKGA*L************IPEEKAI******************KSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKEN*
Disordered Region (DISEMBL)
*************PEVVTTVTIPEEKGAKLEALPAPAPKAKNIPEEKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Disordered Region (DISPRO)
**********ARAPEVVTTVTIPEEKGAKLEALPAPAPKAKNIPEEKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGD*********************DSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETANNPAPARAPEVVTTVTIPEEKGAKLEALPAPAPKAKNIPEEKAIIMTTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKENI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q1PDI1	317	Tetraspanin-15 OS=Arabido	yes	no	0.811	0.858	0.449	2e-62
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.656	0.808	0.304	2e-27
Q9ZUN5	270	Tetraspanin-2 OS=Arabidop	no	no	0.683	0.848	0.287	5e-27
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	no	no	0.683	0.838	0.269	1e-25
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	no	no	0.701	0.824	0.275	5e-25
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.689	0.878	0.268	1e-23
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.647	0.663	0.309	7e-22
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.668	0.826	0.273	4e-21
Q58G33	260	Tetraspanin-14 OS=Arabido	no	no	0.686	0.884	0.291	2e-20
Q9FIQ5	269	Protein TORNADO 2 OS=Arab	no	no	0.629	0.784	0.28	5e-20

>sp|Q1PDI1|TET15_ARATH Tetraspanin-15 OS=Arabidopsis thaliana GN=TET15 PE=2 SV=1

 Score =  239 bits (610), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/278 (44%), Positives = 183/278 (65%), Gaps = 6/278 (2%)

Query: 52  TTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQT 111
            ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT
Sbjct: 40  QSDNKPPMGTLMALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQT 99

Query: 112 GIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASP 171
              + LL +F++S AALFLR KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+ 
Sbjct: 100 LASVGLLAVFVVSNAALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATR 159

Query: 172 RWFKLKV-DNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
            WFKLK+ D+   WNNIKSC+YD   C+DL   S   K Y+   +K+ PI++GCC PP  
Sbjct: 160 MWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPET 217

Query: 231 CGMKFVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKD 289
           C M  +NAT W  + D G  ++   +  D     ++  SDC  W ND ++LCYDC++CK 
Sbjct: 218 CNMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKF 275

Query: 290 GFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWE 327
           GF+R++  KW +LG+FL+++S+ L +SHL +FLAT WE
Sbjct: 276 GFIRSVRRKWWQLGIFLIVISILLLMSHLLIFLATFWE 313

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 125/263 (47%), Gaps = 43/263 (16%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTA 126
           + SL GIL    F++S+PIL++ IWL       CE  L  P +  G+     F+ II+ A
Sbjct: 5   SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGV-----FLMIIAIA 59

Query: 127 A----------LFLRPKFPMPGFLLAVVPLLVMLTV------GLALLGAYDMESRKILAS 170
                      L     F M   +L V+   +   V      G  + G    E R + A 
Sbjct: 60  GVVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYR-LEAY 118

Query: 171 PRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
             W + +V+N  +WN+I+SC+Y++K C +L L +      DF  + L+  ESGCC P   
Sbjct: 119 SDWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSND 178

Query: 231 CGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDG 290
           C   ++ +T+W K      N                 SDC  W N+++ LCY+C+ACK G
Sbjct: 179 CDFTYITSTTWNKTSGTHKN-----------------SDCQLWDNEKHKLCYNCKACKAG 221

Query: 291 FVRTLESKWRKLG----LFLVLM 309
           F+  L++ W+++     +FLVL+
Sbjct: 222 FLDNLKAAWKRVAIVNIIFLVLL 244

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1

 Score =  122 bits (305), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 28/257 (10%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQ----------TGIGIA 116
           A +L+ IL +++ + S+PI AS IWL    D +C NLLR P +           TG   A
Sbjct: 4   ANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGA 63

Query: 117 LLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKL 176
             +   +    L           ++ +   +V    G   +     +  ++     W K 
Sbjct: 64  YKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNWLKE 123

Query: 177 KVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFV 236
            V +  NW  +++C+ DT +C  L  + +T   + F+  K++P++SGCC PP  CG  FV
Sbjct: 124 NVVDSKNWGRLRACLADTNVCPKLNQEFITADQF-FSSSKITPLQSGCCKPPTACGYNFV 182

Query: 237 NATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLE 296
           N T W+   N A                  D+DC  W+ND++ LCY+C +CK G +  L 
Sbjct: 183 NPTLWLNPTNMAA-----------------DADCYLWSNDQSQLCYNCNSCKAGLLGNLR 225

Query: 297 SKWRKLGLFLVLMSLFL 313
            +WRK  L L++  + L
Sbjct: 226 KEWRKANLILIITVVVL 242

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  117 bits (294), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 38/267 (14%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTA 126
           + +L GIL  + F++S+PILA  IWL      +CE  L  P +  G+     F+ +++ A
Sbjct: 5   SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGV-----FLMVVAIA 59

Query: 127 ALF---LRPKFPMPGFLLAVVPLLVML-------------TVGLALLGAYDMESRKILAS 170
            L     R  + +  +L  +  L++++               G A+ G    +  K+   
Sbjct: 60  GLIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGK-GYKEYKLGDY 118

Query: 171 PRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
             W + +V+N  NWN I+SC+ ++K+C  L  K + V    F  + L+ ++SGCC P   
Sbjct: 119 STWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDE 178

Query: 231 CGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDG 290
           CG ++VN                P     +      + DC TW N +  LC+DCQ+CK G
Sbjct: 179 CGFEYVN----------------PTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAG 222

Query: 291 FVRTLESKWRKLGLFLVLMSLFLFVSH 317
            +  ++S W+K+ +  ++  +FL + +
Sbjct: 223 LLDNVKSAWKKVAIVNIVFLVFLIIVY 249

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score =  115 bits (288), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 134/276 (48%), Gaps = 41/276 (14%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDY-DCENLLRLPRLQTGIGIALLFMFIIST 125
           +  L G++  ++F++S+PIL   IWL    +  DC   L+ P +   IGI+++ + +   
Sbjct: 4   SNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIV--IGISIMVVSLAGF 61

Query: 126 AALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDM----ESRKILAS----------P 171
           A    R KF M  +L  VV LL++  +   ++ AY +      R +L             
Sbjct: 62  AGACYRNKFLM--WLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYS 119

Query: 172 RWFKLKVDNPNNWNNIKSCIYDTKICDDLF--LKSLTVKSYDFTMKKLSPIESGCCTPPA 229
            W K +V + + W  I SC+ D+  C  +      +   +  F +++LSP+ESGCC PP 
Sbjct: 120 GWLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPT 179

Query: 230 VCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLL--DSDCDTWTNDRNVLCYDCQAC 287
            CG  +VN T W                  D    ++  + DC  W+ND+++LCY C +C
Sbjct: 180 DCGFSYVNETGW------------------DTRGGMIGPNQDCMVWSNDQSMLCYQCSSC 221

Query: 288 KDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLA 323
           K G + +L+  WRK+ +  +++ + L + ++  + A
Sbjct: 222 KAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAA 257

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 33/264 (12%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTA 126
           + +L GIL   +F++S+PIL++ IWL      +CE  L  P +   +GI L+F+ I    
Sbjct: 5   SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVV--LGIFLMFVSIAGLV 62

Query: 127 ALFLRPKFPMPGFLLAVVPLLVMLTVGLALL-------GAYDMESRK------ILASPRW 173
               R    +  +L A+  LL++L     +        GA ++ S +      +     W
Sbjct: 63  GACCRVSCLLWLYLFAMF-LLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNW 121

Query: 174 FKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGM 233
            + +V+N  NW  I+SC+  + +C     +  ++   DF    L+ ++SGCC P   C  
Sbjct: 122 LQKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNF 181

Query: 234 KFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVR 293
            +VN T+W K      N                  DC+ W N    LCYDC+ACK G + 
Sbjct: 182 TYVNPTTWTKTPGPYKN-----------------EDCNVWDNKPGTLCYDCEACKAGLLD 224

Query: 294 TLESKWRKLGLFLVLMSLFLFVSH 317
            +++ W+K+    ++  +FL + +
Sbjct: 225 NIKNSWKKVAKVNIVFLIFLIIVY 248

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score =  105 bits (261), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 125/255 (49%), Gaps = 38/255 (14%)

Query: 65  LRAKS-LSGILAMISFIVSLPILASVIWLLYMRDY-DCENLLRLPRLQTGIGIALLFMFI 122
           +R++S L G++   +F++S+PIL   IWL    +  DC   L+ P +  GI I ++ +  
Sbjct: 1   MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60

Query: 123 ISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAY---DMESRKILASPR------- 172
           I+ A    + KF M  +L  +  ++  L +G  +  AY   D  S + + + R       
Sbjct: 61  IAGACY--QNKFLMWLYLFTMFFVIAAL-IGFTIF-AYVVTDKGSGRFVMNRRYLDYYLN 116

Query: 173 ----WFKLKVDNPNNWNNIKSCIYDTKICDDLF--LKSLTVKSYDFTMKKLSPIESGCCT 226
               W K +V +   W +I SC+ D+ +C  +   L  +   ++ F  + LSP+ESGCC 
Sbjct: 117 DYSGWLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCK 176

Query: 227 PPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQA 286
           PP  CG  +VN T WI G  G +    P              DC  W ND+ +LCY C +
Sbjct: 177 PPTDCGYTYVNETVWIPG--GEMVGPNP--------------DCMLWNNDQRLLCYQCSS 220

Query: 287 CKDGFVRTLESKWRK 301
           CK G + +L+  WRK
Sbjct: 221 CKAGVLGSLKKSWRK 235

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score =  102 bits (254), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 32/256 (12%)

Query: 76  MISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALF---LRP 132
           ++  + +  I  S+   ++    DCE+ +R+P L TG     L +F++S   +     + 
Sbjct: 15  LVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTG-----LILFLVSLLGVIGSCFKE 69

Query: 133 KFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFK--LKVD---------NP 181
              M  +L+ +   +V L +    L     +    + S R +K    VD           
Sbjct: 70  NLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFVGG 129

Query: 182 NNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSW 241
             W  I+SC+ +  +CDDL    ++  +  F  K LSPI+SGCC PP+ C  +F NAT W
Sbjct: 130 KRWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFW 189

Query: 242 IKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRK 301
           I       N T   +          + DC TW+N +  LC++C ACK G +  +  KWR 
Sbjct: 190 IPPSK---NETAVAE----------NGDCGTWSNVQTELCFNCNACKAGVLANIREKWRN 236

Query: 302 LGLFLVLMSLFLFVSH 317
           L +F + + + L   +
Sbjct: 237 LLVFNICLLILLITVY 252

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q58G33|TET14_ARATH Tetraspanin-14 OS=Arabidopsis thaliana GN=TET14 PE=2 SV=1

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 31/261 (11%)

Query: 70  LSGIL-AMISFIVSLPILASVIWLLYMRD---YDCENLLRLPRLQTGIGIALLFMFIIST 125
           ++GI   +I+F +S P++   ++L  MR+   Y  +    LPR+QT + ++LL +F++S 
Sbjct: 12  VAGIFFPIITFFLSAPLVGHALYLFCMRNDHVYYRDFQSTLPRVQTLVSVSLLALFLLSN 71

Query: 126 AALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWN 185
             +FLRP+       L+   L+++  +G A  G Y MESR+   +P  FK + +N     
Sbjct: 72  IGMFLRPR------RLSYF-LVIVFFIGFAYSGVYKMESRRFSPTPMCFKGEYNNGQGER 124

Query: 186 --------NIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSP-IESGCCTPPAVCGMKFV 236
                    I+      +     F+ S  +  YD   ++L P +++GCC  P  C ++ V
Sbjct: 125 KTEQYQVVKIEQSQGRLQRVHLRFVNSYALPPYD---RRLLPSVKTGCCNRPGNCKLETV 181

Query: 237 NATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLE 296
           NAT W+  +         +  D    N  +    D W ++ +VL YDC  C+   VR ++
Sbjct: 182 NATLWVTRNREGPPLETAMIYDRYGGNADIKDYYDMWRHELSVLYYDCMTCQ---VRIIK 238

Query: 297 S----KWRKLGLFL-VLMSLF 312
           S    KW + G+FL  L SLF
Sbjct: 239 SPRLRKWWQFGVFLSSLTSLF 259

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1

 Score = 98.6 bits (244), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 39/250 (15%)

Query: 67  AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTA 126
           + ++ G +  I+ ++S+P++ + IWL       C  LL+ P +  G+   +L + +    
Sbjct: 4   SNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGV--LILLVGLAGFI 61

Query: 127 ALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPR-------------- 172
             F R  + +  +L+A++ L+V+L     L+G   M + +    P               
Sbjct: 62  GGFWRITWLLVVYLIAMLILIVLLG---CLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFS 118

Query: 173 -WFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVC 231
            W + +V     W  I++C+  T IC +L  +    +  DF    L PI+SGCC PP  C
Sbjct: 119 GWLRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQ--DFFNAHLDPIQSGCCKPPTKC 176

Query: 232 GMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGF 291
           G  FVN T WI           P+D          D DC  W+ND+N LCY C +CK G 
Sbjct: 177 GFTFVNPTYWIS----------PIDMS-------ADMDCLNWSNDQNTLCYTCDSCKAGL 219

Query: 292 VRTLESKWRK 301
           +  ++  W K
Sbjct: 220 LANIKVDWLK 229

Involved in the basipetal transport of auxin (IAA) that modulates growth and organs organization, as well as cell differentiation. Regulates shoot apical meristem (SAM) organization in the peripheral zone. Required for initial meristematic divisions in the epidermal/lateral root cap leading to the formation of epidermal cells and a clone of lateral root cap cells, as well as for the maintenance of the radial pattern of cell specification in the root, thus regulating the distinction between the lateral root cap and epidermis. Together with WIH peptides, promotes megasporogenesis.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
255574611	302	conserved hypothetical protein [Ricinus	0.814	0.903	0.515	1e-81
224091865	277	predicted protein [Populus trichocarpa]	0.746	0.902	0.557	3e-80
224142323	287	predicted protein [Populus trichocarpa]	0.746	0.871	0.549	3e-78
18424028	317	tetraspanin15 [Arabidopsis thaliana] gi|	0.811	0.858	0.449	1e-60
116831623	318	unknown [Arabidopsis thaliana]	0.811	0.855	0.449	2e-60
9758350	271	unnamed protein product [Arabidopsis tha	0.755	0.933	0.471	4e-60
21592459	317	unknown [Arabidopsis thaliana]	0.811	0.858	0.446	2e-59
297796695	314	hypothetical protein ARALYDRAFT_495877 [	0.811	0.866	0.454	2e-54
255574609	172	conserved hypothetical protein [Ricinus	0.495	0.965	0.514	4e-42
449466891	233	PREDICTED: uncharacterized protein LOC10	0.659	0.948	0.404	1e-41

>gi|255574611|ref|XP_002528216.1| conserved hypothetical protein [Ricinus communis] gi|223532377|gb|EEF34173.1| conserved hypothetical protein [Ricinus communis]

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 210/289 (72%), Gaps = 16/289 (5%)

Query: 45  EEKAIIMTTEKAAPALSI-------NALRAKSLSGILAMISFIVSLPILASVIWLLYMRD 97
           E  A+ +T E+A P   +        A++ K+++G++++I+FI+SLPILASVIWLLYM+D
Sbjct: 17  ETVAVTVTEEEAKPNREVPEKKMTDKAIQVKNIAGLISIITFILSLPILASVIWLLYMKD 76

Query: 98  YDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALL 157
           YDCE LL LP+LQ G+G+ L+F+F+IS AA+FL  +FP+PGF + +VPL+V+ T+GLAL+
Sbjct: 77  YDCEKLLTLPKLQIGLGVGLVFVFLISNAAVFLSRRFPVPGFFIVMVPLIVIFTMGLALV 136

Query: 158 GAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKL 217
           G Y MESR+I+A+P WFK KV + + W NIKSCIY   +CDDL  +SL VK++DF+ +KL
Sbjct: 137 GGYKMESRRIMATPMWFKEKVRDESYWTNIKSCIYSKGLCDDLAYRSLAVKAFDFSTRKL 196

Query: 218 SPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDR 277
           S +ESGCC PP  C M++VNAT W K D            D +++ ++ + DCD W N R
Sbjct: 197 SSVESGCCKPPNSCQMEYVNATYWTKADK---------IGDMEEKAQVYNRDCDLWNNSR 247

Query: 278 NVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMW 326
             LCYDC++CK GFV  LESKW +LG+FL+LM+L L ++H+ LF+A MW
Sbjct: 248 TALCYDCESCKGGFVEMLESKWWRLGVFLILMALLLILAHMLLFIAVMW 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091865|ref|XP_002309378.1| predicted protein [Populus trichocarpa] gi|222855354|gb|EEE92901.1| predicted protein [Populus trichocarpa]

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 146/262 (55%), Positives = 202/262 (77%), Gaps = 12/262 (4%)

Query: 66  RAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIIST 125
           + K+ + IL++I+F++S+ ILAS IWLLYM+DYDCE LL LPRLQ GIGI L+F+ +IS 
Sbjct: 25  QVKNYASILSIITFVLSVVILASAIWLLYMKDYDCEKLLWLPRLQIGIGIGLIFVSLISN 84

Query: 126 AALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWN 185
            A+ LR +FP+PGF L +VPL+VMLT+GLAL+GA  +ESR+++A+P+WF+ KV + +NW 
Sbjct: 85  IAVLLRSRFPVPGFFLVMVPLIVMLTMGLALVGANKLESRRLMATPKWFREKVRHNDNWE 144

Query: 186 NIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGD 245
           NIKSCIY+T  CDDL  +SL +K++DF++KKLSPIE+GCC PP++C M++VNAT W K +
Sbjct: 145 NIKSCIYNTGTCDDLVSRSLNLKAFDFSIKKLSPIEAGCCKPPSICQMEYVNATFWTKVE 204

Query: 246 NGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLF 305
            GAV           DE++   SDC TW ND+N+LCY+C +C+ GFVR +ESKWR LG+ 
Sbjct: 205 -GAV-----------DESQQQYSDCATWQNDQNILCYNCGSCRHGFVRVMESKWRNLGVL 252

Query: 306 LVLMSLFLFVSHLFLFLATMWE 327
           L+LM L L ++H+ LF+  MWE
Sbjct: 253 LILMGLLLIIAHISLFVMVMWE 274

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142323|ref|XP_002324508.1| predicted protein [Populus trichocarpa] gi|222865942|gb|EEF03073.1| predicted protein [Populus trichocarpa]

 Score =  298 bits (762), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 144/262 (54%), Positives = 198/262 (75%), Gaps = 12/262 (4%)

Query: 66  RAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIIST 125
           + +  +G+L++ +F++S+ I+A  IWLLYMRDYDCE LLRLPRLQ GIGI L+F+ +IS 
Sbjct: 37  QVRKYAGLLSIFTFVLSVLIIALAIWLLYMRDYDCEKLLRLPRLQMGIGIGLIFVSLISN 96

Query: 126 AALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNPNNWN 185
             +FLRP+FP+PGF L +VPL+VM T+GLAL+GA  MESR+++A+P WF+ K+ N ++W 
Sbjct: 97  IVVFLRPRFPVPGFFLVMVPLIVMFTMGLALVGANKMESRRLVATPMWFREKIRNHDDWE 156

Query: 186 NIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGD 245
           NIKSCI+ +  CDDL  +SL +K++DF++KKLS IESGCC PP++C M++VNAT WIK D
Sbjct: 157 NIKSCIFSSGTCDDLVSRSLNLKAFDFSIKKLSSIESGCCKPPSICQMEYVNATFWIKVD 216

Query: 246 NGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLF 305
            GAV           DE++L  SDC TW ND + LCY+C +C+ GFVR +ESKWR LG+ 
Sbjct: 217 -GAV-----------DESQLQYSDCATWRNDPSSLCYNCGSCRRGFVRIMESKWRNLGVL 264

Query: 306 LVLMSLFLFVSHLFLFLATMWE 327
           L+LM L L ++H+ LF+  MWE
Sbjct: 265 LILMGLLLVIAHILLFVMVMWE 286

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424028|ref|NP_568866.1| tetraspanin15 [Arabidopsis thaliana] gi|122180030|sp|Q1PDI1.1|TET15_ARATH RecName: Full=Tetraspanin-15 gi|91807060|gb|ABE66257.1| senescence-associated protein-like protein [Arabidopsis thaliana] gi|332009571|gb|AED96954.1| tetraspanin15 [Arabidopsis thaliana]

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/278 (44%), Positives = 183/278 (65%), Gaps = 6/278 (2%)

Query: 52  TTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQT 111
            ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT
Sbjct: 40  QSDNKPPMGTLMALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQT 99

Query: 112 GIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASP 171
              + LL +F++S AALFLR KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+ 
Sbjct: 100 LASVGLLAVFVVSNAALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATR 159

Query: 172 RWFKLKV-DNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
            WFKLK+ D+   WNNIKSC+YD   C+DL   S   K Y+   +K+ PI++GCC PP  
Sbjct: 160 MWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPET 217

Query: 231 CGMKFVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKD 289
           C M  +NAT W  + D G  ++   +  D     ++  SDC  W ND ++LCYDC++CK 
Sbjct: 218 CNMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKF 275

Query: 290 GFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWE 327
           GF+R++  KW +LG+FL+++S+ L +SHL +FLAT WE
Sbjct: 276 GFIRSVRRKWWQLGIFLIVISILLLMSHLLIFLATFWE 313

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831623|gb|ABK28764.1| unknown [Arabidopsis thaliana]

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/278 (44%), Positives = 183/278 (65%), Gaps = 6/278 (2%)

Query: 52  TTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQT 111
            ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT
Sbjct: 40  QSDNKPPMGTLMALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQT 99

Query: 112 GIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASP 171
              + LL +F++S AALFLR KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+ 
Sbjct: 100 LASVGLLAVFVVSNAALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATR 159

Query: 172 RWFKLKV-DNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
            WFKLK+ D+   WNNIKSC+YD   C+DL   S   K Y+   +K+ PI++GCC PP  
Sbjct: 160 MWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPET 217

Query: 231 CGMKFVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKD 289
           C M  +NAT W  + D G  ++   +  D     ++  SDC  W ND ++LCYDC++CK 
Sbjct: 218 CNMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKF 275

Query: 290 GFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWE 327
           GF+R++  KW +LG+FL+++S+ L +SHL +FLAT WE
Sbjct: 276 GFIRSVRRKWWQLGIFLIVISILLLMSHLLIFLATFWE 313

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9758350|dbj|BAB08851.1| unnamed protein product [Arabidopsis thaliana]

 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 122/259 (47%), Positives = 176/259 (67%), Gaps = 6/259 (2%)

Query: 71  SGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFL 130
           +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT   + LL +F++S AALFL
Sbjct: 13  AGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQTLASVGLLAVFVVSNAALFL 72

Query: 131 RPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKV-DNPNNWNNIKS 189
           R KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+  WFKLK+ D+   WNNIKS
Sbjct: 73  RRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATRMWFKLKIMDDHVTWNNIKS 132

Query: 190 CIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWI-KGDNGA 248
           C+YD   C+DL   S   K Y+   +K+ PI++GCC PP  C M  +NAT W  + D G 
Sbjct: 133 CVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPETCNMDAINATFWYRRKDEGP 190

Query: 249 VNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVL 308
            ++   +  D     ++  SDC  W ND ++LCYDC++CK GF+R++  KW +LG+FL++
Sbjct: 191 PSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKFGFIRSVRRKWWQLGIFLIV 248

Query: 309 MSLFLFVSHLFLFLATMWE 327
           +S+ L +SHL +FLAT WE
Sbjct: 249 ISILLLMSHLLIFLATFWE 267

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592459|gb|AAM64410.1| unknown [Arabidopsis thaliana]

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/278 (44%), Positives = 182/278 (65%), Gaps = 6/278 (2%)

Query: 52  TTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQT 111
            ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT
Sbjct: 40  QSDNKPPMGTLMALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQT 99

Query: 112 GIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASP 171
              + LL +F++S AALFLR KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+ 
Sbjct: 100 LASVGLLAVFVVSNAALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATR 159

Query: 172 RWFKLKV-DNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
            WFKLK+ D+   WNNIKSC+YD   C+DL   S   K Y+   +K+ PI++GCC PP  
Sbjct: 160 MWFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPET 217

Query: 231 CGMKFVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKD 289
           C M  +NAT W  + D G  ++   +  D     ++  SDC  W ND ++LC DC++CK 
Sbjct: 218 CNMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCNDCRSCKF 275

Query: 290 GFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWE 327
           GF+R++  KW +LG+FL+++S+ L +SHL +FLAT WE
Sbjct: 276 GFIRSVRRKWWQLGIFLIVISILLLMSHLLIFLATFWE 313

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297796695|ref|XP_002866232.1| hypothetical protein ARALYDRAFT_495877 [Arabidopsis lyrata subsp. lyrata] gi|297312067|gb|EFH42491.1| hypothetical protein ARALYDRAFT_495877 [Arabidopsis lyrata subsp. lyrata]

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 183/277 (66%), Gaps = 5/277 (1%)

Query: 52  TTEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQT 111
            ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT
Sbjct: 38  QSDNKPPVGTLVALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQT 97

Query: 112 GIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASP 171
              + LL +F++S AALFLR KFPMP  ++ VV LL+ML +GLA  G  +M+SR+  A+ 
Sbjct: 98  LASVGLLAVFVVSNAALFLRRKFPMPALVVMVVILLLMLFIGLAYAGVNEMQSRRFPATR 157

Query: 172 RWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVC 231
            WFKLK+ +  NWNNIKSCIYD   C+DL  +S   K Y+   + + PI++GCC PP  C
Sbjct: 158 MWFKLKIMDDVNWNNIKSCIYDKGACNDLIYESPNEKPYN--RRNMPPIKNGCCMPPETC 215

Query: 232 GMKFVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDG 290
            M  +NAT W  + D G  ++   +  D     ++  SDC  W ND ++LCYDC++CK G
Sbjct: 216 NMDAINATFWYRRKDEGPPSSMTLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKFG 273

Query: 291 FVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWE 327
           FVR++  KW +LG+FL+++S+ L +SHL +FLAT WE
Sbjct: 274 FVRSVRRKWWQLGIFLIVISILLLISHLLIFLATFWE 310

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574609|ref|XP_002528215.1| conserved hypothetical protein [Ricinus communis] gi|223532376|gb|EEF34172.1| conserved hypothetical protein [Ricinus communis]

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 90/175 (51%), Positives = 122/175 (69%), Gaps = 9/175 (5%)

Query: 152 VGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYD 211
           +GLAL+G Y MESR+I+A+P WFK KV + + W NIKSCI    +CDDL  +SL VK++D
Sbjct: 1   MGLALVGDYKMESRRIMATPMWFKEKVRDESYWTNIKSCISSKGLCDDLAYRSLAVKAFD 60

Query: 212 FTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCD 271
           F+ +KLS +ESGCC PP  C M++VNAT W K D            D +++ ++ + DCD
Sbjct: 61  FSTRKLSSVESGCCKPPNSCQMEYVNATYWTKADKIG---------DMEEKAQVYNRDCD 111

Query: 272 TWTNDRNVLCYDCQACKDGFVRTLESKWRKLGLFLVLMSLFLFVSHLFLFLATMW 326
            W N R  LCYDC++CK GFV  LESKW +LG+FL+LM+L L ++H+ LF+A MW
Sbjct: 112 LWNNSRTTLCYDCESCKGGFVEMLESKWWRLGVFLILMALLLILTHMLLFIAVMW 166

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466891|ref|XP_004151159.1| PREDICTED: uncharacterized protein LOC101210719 [Cucumis sativus] gi|449531327|ref|XP_004172638.1| PREDICTED: uncharacterized LOC101210719 [Cucumis sativus]

 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 139/230 (60%), Gaps = 9/230 (3%)

Query: 1   MAETANNPAPARAPEVVTTVTIPEEKGA---KLEALPAPAPKAKNIPEEKAIIMTTEKAA 57
           MAE  NN   A A E    V + EEK     K                +  I   ++   
Sbjct: 1   MAENENN-GNAVAEEARAIVAVVEEKAPCKDKELGDCGGGGGGGGGGGDDDIPKASKNKN 59

Query: 58  PALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIAL 117
           P L IN     +L   +A ++ I+S+P+L  ++W+ Y+R+ +CE++L+LP  Q GIG+ L
Sbjct: 60  PLLEIN-----NLEKAIATMTLILSIPVLGFIVWIFYVRESECESILKLPSFQIGIGVGL 114

Query: 118 LFMFIISTAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLK 177
           +F+F+IS A +FLR ++P+ G L+ +VPLL+   +GLAL+GAY MESR + ASP+W +LK
Sbjct: 115 IFLFLISNAVVFLRSRYPVLGLLIVMVPLLLTFIIGLALVGAYKMESRSVAASPKWLRLK 174

Query: 178 VDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTP 227
           V +  +  +IK+CIYD+  CDDL  ++L +KSYDF++KKLS IE     P
Sbjct: 175 VFDQAHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIEVNSSLP 224

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2174383	317	TET15 "AT5G57810" [Arabidopsis	0.808	0.854	0.382	8.3e-51
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.546	0.677	0.296	2.3e-31
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.591	0.727	0.271	4.1e-28
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.653	0.802	0.289	1.2e-26
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.588	0.749	0.263	8.2e-26
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.653	0.669	0.292	1.4e-23
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.629	0.740	0.308	1.3e-22
TAIR|locus:2178570	269	TRN2 "AT5G46700" [Arabidopsis	0.570	0.710	0.261	1.7e-20
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.588	0.726	0.284	1.5e-19
TAIR|locus:2041155	260	TET14 "AT2G01960" [Arabidopsis	0.647	0.834	0.275	3.7e-16

TAIR|locus:2174383 TET15 "AT5G57810" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
 Identities = 106/277 (38%), Positives = 155/277 (55%)

Query:    53 TEKAAPALSINALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTG 112
             ++   P  ++ AL     +G+L + +F++SL +L   +WLLYMR YDCE++L LPR+QT 
Sbjct:    41 SDNKPPMGTLMALVNILAAGVLPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQTL 100

Query:   113 IGIALLFMFIISTAALFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESRKILASPR 172
               + LL +F++S AALFLR KFPMP  ++ VV                +M+SR+  A+  
Sbjct:   101 ASVGLLAVFVVSNAALFLRRKFPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATRM 160

Query:   173 WFKLKV-DNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVC 231
             WFKLK+ D+   WNNIKSC+YD   C+DL   S   K Y+   +K+ PI++GCC PP  C
Sbjct:   161 WFKLKIMDDHVTWNNIKSCVYDKGACNDLIYGSPNEKPYN--RRKMPPIKNGCCMPPETC 218

Query:   232 GMKFVNATSWIKG-DNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDG 290
              M  +NAT W +  D G  ++   +  D     ++  SDC  W ND ++LCYDC++CK G
Sbjct:   219 NMDAINATFWYRRKDEGPPSSMNLMYGDEMMVGRI--SDCQLWRNDWSILCYDCRSCKFG 276

Query:   291 FVRTLESKWRKXXXXXXXXXXXXXXXXXXXXXATMWE 327
             F+R++  KW +                     AT WE
Sbjct:   277 FIRSVRRKWWQLGIFLIVISILLLMSHLLIFLATFWE 313

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
 Identities = 61/206 (29%), Positives = 99/206 (48%)

Query:    67 AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALL-------- 118
             A +L+ IL +++ + S+PI AS IWL    D +C NLLR P +  G+ I ++        
Sbjct:     4 ANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGFIGA 63

Query:   119 FMFIISTAALFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESR-----KILASPRW 173
             + +  +  A++L     + G LL V+               Y +  R     ++     W
Sbjct:    64 YKYKETLLAVYLCCMAILIGLLLVVL---IFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120

Query:   174 FKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGM 233
              K  V +  NW  +++C+ DT +C  L  + +T   + F+  K++P++SGCC PP  CG 
Sbjct:   121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQF-FSSSKITPLQSGCCKPPTACGY 179

Query:   234 KFVNATSWIKGDNGAVNNTVPLDSDC 259
              FVN T W+   N A       D+DC
Sbjct:   180 NFVNPTLWLNPTNMAA------DADC 199

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
 Identities = 59/217 (27%), Positives = 101/217 (46%)

Query:    67 AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMF-IIST 125
             + SL GIL    F++S+PIL++ IWL       CE  L  P +  G+ + ++ +  ++ +
Sbjct:     5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64

Query:   126 AA----LFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESR-----KILASPRWFKL 176
                   L     F M   +L V+                 ++ +     ++ A   W + 
Sbjct:    65 CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124

Query:   177 KVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFV 236
             +V+N  +WN+I+SC+Y++K C +L L +      DF  + L+  ESGCC P   C   ++
Sbjct:   125 RVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDCDFTYI 184

Query:   237 NATSWIKGDNGAVNNTVPLDSDC---DDENKLLDSDC 270
              +T+W K  +G   N     SDC   D+E   L  +C
Sbjct:   185 TSTTWNK-TSGTHKN-----SDCQLWDNEKHKLCYNC 215

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 71/245 (28%), Positives = 114/245 (46%)

Query:    67 AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMF-IIST 125
             + +L GIL  + F++S+PILA  IWL      +CE  L  P +  G+ + ++ +  +I +
Sbjct:     5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64

Query:   126 AA---------LFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESRKILASPRWFKL 176
                        LF+     +  F + V                   +  K+     W + 
Sbjct:    65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124

Query:   177 KVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFV 236
             +V+N  NWN I+SC+ ++K+C  L  K + V    F  + L+ ++SGCC P   CG ++V
Sbjct:   125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYV 184

Query:   237 NATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLE 296
             N T+W K   G   N  P              DC TW N +  LC+DCQ+CK G +  ++
Sbjct:   185 NPTTWTKNTTGTHTN--P--------------DCQTWDNAKEKLCFDCQSCKAGLLDNVK 228

Query:   297 SKWRK 301
             S W+K
Sbjct:   229 SAWKK 233

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
 Identities = 58/220 (26%), Positives = 94/220 (42%)

Query:    67 AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTA 126
             + +L GIL   +F++S+PIL++ IWL      +CE  L  P +   +GI L+F+ I    
Sbjct:     5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVV--LGIFLMFVSIAGLV 62

Query:   127 A----------LFLRPKFPMP--GFLLAVVPXXXXXXXXXXXXXXYDMESRKILASPRWF 174
                        L+L   F +   GF   +                   +   +     W 
Sbjct:    63 GACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWL 122

Query:   175 KLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMK 234
             + +V+N  NW  I+SC+  + +C     +  ++   DF    L+ ++SGCC P   C   
Sbjct:   123 QKRVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQSGCCKPSNDCNFT 182

Query:   235 FVNATSWIKGDNGAVNNTVPLDSDCDD-ENK--LLDSDCD 271
             +VN T+W K   G   N      DC+  +NK   L  DC+
Sbjct:   183 YVNPTTWTKTP-GPYKN-----EDCNVWDNKPGTLCYDCE 216

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 74/253 (29%), Positives = 117/253 (46%)

Query:    65 LRAKS-LSGILAMISFIVSLPILASVIWLLYMRDY-DCENLLRLPRLQTGIGIALLFMFI 122
             +R++S L G++   +F++S+PIL   IWL    +  DC   L+ P +   IGI+++ + +
Sbjct:     1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLII--IGISIMVISL 58

Query:   123 ISTAALFLRPKFPMPGFLLAVV-PXXXXXXXXXXXXXXYDMESRKILASPR--------- 172
                A    + KF M  +L  +                  D  S + + + R         
Sbjct:    59 AGIAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDY 118

Query:   173 --WFKLKVDNPNNWNNIKSCIYDTKICDDLF--LKSLTVKSYDFTMKKLSPIESGCCTPP 228
               W K +V +   W +I SC+ D+ +C  +   L  +   ++ F  + LSP+ESGCC PP
Sbjct:   119 SGWLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPP 178

Query:   229 AVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACK 288
               CG  +VN T WI G  G +    P              DC  W ND+ +LCY C +CK
Sbjct:   179 TDCGYTYVNETVWIPG--GEMVGPNP--------------DCMLWNNDQRLLCYQCSSCK 222

Query:   289 DGFVRTLESKWRK 301
              G + +L+  WRK
Sbjct:   223 AGVLGSLKKSWRK 235

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 77/250 (30%), Positives = 118/250 (47%)

Query:    70 LSGILAMISFIVSLPILASVIWLLYMRDY-DCENLLRLPRLQTGIGIALLFMFIISTAAL 128
             L G++  ++F++S+PIL   IWL    +  DC   L+ P +   IGI+++ + +   A  
Sbjct:     7 LIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIV--IGISIMVVSLAGFAGA 64

Query:   129 FLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXY---DMES-RKILAS----------PRWF 174
               R KF M  +L  VV               Y   D  S R +L              W 
Sbjct:    65 CYRNKFLM--WLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSGWL 122

Query:   175 KLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTV-KSYD-FTMKKLSPIESGCCTPPAVCG 232
             K +V + + W  I SC+ D+  C  +      V ++ D F +++LSP+ESGCC PP  CG
Sbjct:   123 KDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCG 182

Query:   233 MKFVNATSW-IKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGF 291
               +VN T W  +G  G +    P            + DC  W+ND+++LCY C +CK G 
Sbjct:   183 FSYVNETGWDTRG--GMIG---P------------NQDCMVWSNDQSMLCYQCSSCKAGV 225

Query:   292 VRTLESKWRK 301
             + +L+  WRK
Sbjct:   226 LGSLKKSWRK 235

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2178570 TRN2 "AT5G46700" [Arabidopsis thaliana (taxid:3702)]

 Score = 177 (67.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 59/226 (26%), Positives = 99/226 (43%)

Query:    67 AKSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGI-----GIA----- 116
             + ++ G +  I+ ++S+P++ + IWL       C  LL+ P +  G+     G+A     
Sbjct:     4 SNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGFIGG 63

Query:   117 ------LLFMFIISTAALFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESRKILAS 170
                   LL +++I+   L +     + GF+  V                Y ++       
Sbjct:    64 FWRITWLLVVYLIAMLILIVLLGC-LVGFIYMVTIRGSGHPEPSRAYLEYSLQDFS---- 118

Query:   171 PRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAV 230
               W + +V     W  I++C+  T IC +L  +  T+ + DF    L PI+SGCC PP  
Sbjct:   119 -GWLRRRVQRSYKWERIRTCLSTTTICPELNQR-YTL-AQDFFNAHLDPIQSGCCKPPTK 175

Query:   231 CGMKFVNATSWIKGDNGAVNNTVPLDSDC----DDENKLLDSDCDT 272
             CG  FVN T WI   +      +  D DC    +D+N L  + CD+
Sbjct:   176 CGFTFVNPTYWISPID------MSADMDCLNWSNDQNTLCYT-CDS 214

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0009956 "radial pattern formation" evidence=IMP

GO:0010015 "root morphogenesis" evidence=RCA;IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0040007 "growth" evidence=RCA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 64/225 (28%), Positives = 98/225 (43%)

Query:    88 SVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMF-IISTAALFLRPKFPMPGFLLAVVPX 146
             S+   ++    DCE+ +R+P L TG+   +LF+  ++       +    M  +L+ +   
Sbjct:    27 SIYMFVHQGVTDCESAIRIPLLTTGL---ILFLVSLLGVIGSCFKENLAMVSYLIILFGG 83

Query:   147 XXXXXXXXXXXXXYDMESRKILASPRWFK--LKVD---------NPNNWNNIKSCIYDTK 195
                             +    + S R +K    VD             W  I+SC+ +  
Sbjct:    84 IVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWLNGFVGGKRWVGIRSCLAEAN 143

Query:   196 ICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPL 255
             +CDDL    ++  +  F  K LSPI+SGCC PP+ C  +F NAT WI       N T   
Sbjct:   144 VCDDLSDGRVSQIADAFYHKNLSPIQSGCCKPPSDCNFEFRNATFWIPPSK---NETAVA 200

Query:   256 DSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWR 300
                   EN     DC TW+N +  LC++C ACK G +  +  KWR
Sbjct:   201 ------EN----GDCGTWSNVQTELCFNCNACKAGVLANIREKWR 235

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2041155 TET14 "AT2G01960" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 68/247 (27%), Positives = 115/247 (46%)

Query:    70 LSGIL-AMISFIVSLPILASVIWLLYMRD---YDCENLLRLPRLQTGIGIALLFMFIIST 125
             ++GI   +I+F +S P++   ++L  MR+   Y  +    LPR+QT + ++LL +F++S 
Sbjct:    12 VAGIFFPIITFFLSAPLVGHALYLFCMRNDHVYYRDFQSTLPRVQTLVSVSLLALFLLSN 71

Query:   126 AALFLRPKFPMPGFLLAVVPXXXXXXXXXXXXXXYDMESRKILASPRWFKLKVDNPNNWN 185
               +FLRP+  +  FL+ V                Y MESR+   +P  FK + +N     
Sbjct:    72 IGMFLRPR-RLSYFLVIVF------FIGFAYSGVYKMESRRFSPTPMCFKGEYNNGQGER 124

Query:   186 NIKSCIYDT-KICDDL---------FLKSLTVKSYDFTMKKLSP-IESGCCTPPAVCGMK 234
               +   Y   KI             F+ S  +  YD   ++L P +++GCC  P  C ++
Sbjct:   125 KTEQ--YQVVKIEQSQGRLQRVHLRFVNSYALPPYD---RRLLPSVKTGCCNRPGNCKLE 179

Query:   235 FVNATSWI-KGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVR 293
              VNAT W+ +   G    T  +  D    N  +    D W ++ +VL YDC  C+   ++
Sbjct:   180 TVNATLWVTRNREGPPLETAMI-YDRYGGNADIKDYYDMWRHELSVLYYDCMTCQVRIIK 238

Query:   294 TLE-SKW 299
             +    KW
Sbjct:   239 SPRLRKW 245

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q1PDI1	TET15_ARATH	No assigned EC number	0.4496	0.8119	0.8580	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	6e-05

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 53/258 (20%)

Query: 68  KSLSGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALL--FMFIIS- 124
           K L  +L ++  ++ L +LA  IWLL +        L        I I +L   + ++  
Sbjct: 3   KYLLFLLNLLFLLLGLALLAVGIWLLVIAKDYLAIALNDSIRALYILIIVLGVIILLVGF 62

Query: 125 ---TAALFLRPKFPMPGFLLAVVPLLVMLTVGLALLGAYDMESRKILASPRWFKLKVDNP 181
                A+       +  F+L ++  ++ +  G+      D     +     +     ++ 
Sbjct: 63  LGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYRDKLESSLKEGLNYKDKSYNDD 122

Query: 182 NNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTPPAVCGMKFVNATSW 241
            N       +  +  C                                 CG    + T W
Sbjct: 123 PNLTEAIDELQKSLEC---------------------------------CG--VNSYTDW 147

Query: 242 IKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKWRK 301
                    ++        +     DSDC  W ND + L    + CK+  +  L+   + 
Sbjct: 148 --------LDSQYFSPSSSNP----DSDCCCWNNDTSNLNIYTEGCKEKLLEFLKKNLKI 195

Query: 302 LGLFLVLMSLFLFVSHLF 319
           +G   + +++   +  + 
Sbjct: 196 IGGVGLGIAVIQLLGIIL 213

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
KOG3882	237	consensus Tetraspanin family integral membrane pro	99.93
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.75
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	96.67
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	96.19
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	95.81
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	95.74
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	95.49
cd03157	103	TM4SF12_like_LEL Tetraspanin, extracellular domain	95.43
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	95.22
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	95.02
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	94.98
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	94.95
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	94.79
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	94.64
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	94.63
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	94.41
cd03127	90	tetraspanin_LEL Tetraspanin, extracellular domain	93.86
COG4993	773	Gcd Glucose dehydrogenase [Carbohydrate transport	87.11
cd03152	84	CD9_LEL Tetraspanin, extracellular domain or large	85.7

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=99.93  E-value=4.1e-25  Score=203.52  Aligned_cols=215  Identities=13%  Similarity=0.173  Sum_probs=151.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeccCcccc----ccccchHHHHHHHHHHHHHHHHHHHHhhCCCccHHHH
Q 036418           64 ALRAKSLSGILAMISFIVSLPILASVIWLLYMRDYDCEN----LLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGF  139 (335)
Q Consensus        64 ~~~vK~ll~~~Nfl~~l~Gi~ILg~GIWl~~~~~~~c~~----~l~~P~ilI~iGv~illVsllGc~GA~~es~clL~~Y  139 (335)
                      .+|+|++++++|+++|++|+.++++|+|+..++...-.-    ++..++++|++|.+++++|++||+||+|||+|+|.+|
T Consensus         6 ~~~~K~~lf~~N~~~~l~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y   85 (237)
T KOG3882|consen    6 SSCLKYLLFLLNLLFWLLGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSY   85 (237)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHH
Confidence            579999999999999999999999999999985421111    3567889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--HHHHhhcccccccccc-cCchhHHhhcCCCC---CchhhhhHhhhcCcccccccccCcccccchhh
Q 036418          140 LLAVVPLLVMLT--VGLALLGAYDMESRKI-LASPRWFKLKVDNP---NNWNNIKSCIYDTKICDDLFLKSLTVKSYDFT  213 (335)
Q Consensus       140 ~ilm~lLil~li--~~faf~gg~~v~~r~L-~DYs~WLq~rv~d~---~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~  213 (335)
                      ++++++++++.+  .+++|+..+++.+.-. +.+..-.+.+..++   +.||.+|.-+    .|||.++. +     ||+
T Consensus        86 ~~~l~l~~i~e~~~~i~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~d~~Q~~~----~CCG~~~~-~-----~~~  155 (237)
T KOG3882|consen   86 FILLLLLFIAELAAGILAFVFRDSLRDELEEQLLKSIWNNYSSDPDLGEAWDKLQREL----KCCGVNGY-S-----DYF  155 (237)
T ss_pred             HHHHHHHHHHHHHHHHHhheeHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHhc----cCCcCCCc-h-----HHh
Confidence            999988888843  3333322233333211 11122222222222   4688777655    99999994 3     666


Q ss_pred             hccCCCCCCcccCCCCCCCCCccCceeeecCCCCCcCCCCCCCCCCcccccCCCcccccccCCCCcccccCcchhhHHHH
Q 036418          214 MKKLSPIESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVR  293 (335)
Q Consensus       214 ~~~lspIqSGCCKPPt~Cg~~y~N~T~W~~~~~~~~~~~~~~~~~~~~~~~~~d~DC~~WsNd~~~LCy~C~SCKaGvL~  293 (335)
                      ......+|++||++.....              .+..               .+++..                +.|.++
T Consensus       156 ~~~~~~vP~SCC~~~~~~~--------------~~~~---------------~~~~~~----------------~~GC~~  190 (237)
T KOG3882|consen  156 NCSSNNVPPSCCKRTRRQK--------------FPQD---------------VPDNIY----------------TEGCLE  190 (237)
T ss_pred             cCCCCCCCcccCCCccccc--------------cccc---------------chhhhh----------------ccccHH
Confidence            5432229999998710000              0000               011111                457778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036418          294 TLESKWRKLGLFLVLMSLFLFVSHLFLFLATMWELVVVKE  333 (335)
Q Consensus       294 ~lr~~W~~~~i~ni~~~i~Li~~~~~~~~~~~~~~~~~~~  333 (335)
                      .+++.++....+...+.+.+.++|+++++++|.....++.
T Consensus       191 ~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~a~~l~~~i~~  230 (237)
T KOG3882|consen  191 KLSSWLESNLLIIGGVGLGIAVLELLGMILACCLANAIRN  230 (237)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888888888888888889999999999999999887764

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.75  E-value=6.6e-20  Score=160.03  Aligned_cols=210  Identities=14%  Similarity=0.126  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhe-eeccCc---cccccccchHHHHHHHHHHHHHHHHHHHHhhCCCccHHHHHH
Q 036418           66 RAKSLSGILAMISFIVSLPILASVIWLL-YMRDYD---CENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLL  141 (335)
Q Consensus        66 ~vK~ll~~~Nfl~~l~Gi~ILg~GIWl~-~~~~~~---c~~~l~~P~ilI~iGv~illVsllGc~GA~~es~clL~~Y~i  141 (335)
                      |+|+++.++|++++++|++++++|+|+. ......   .......+.+++.+|+++++++++|++|+++++++++..|.+
T Consensus         1 c~k~~l~~~n~l~~l~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~   80 (221)
T PF00335_consen    1 CLKYILFFLNVLFLLLGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYII   80 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccc
Confidence            6899999999999999999999999993 222111   112233455667789999999999999999999999999998


Q ss_pred             HHHHHHHHHH--HHHHhhcccccccccccCchhHHhhcCCCCCchhhhhHhhhcCcccccccccCcccccchhhhccCCC
Q 036418          142 AVVPLLVMLT--VGLALLGAYDMESRKILASPRWFKLKVDNPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSP  219 (335)
Q Consensus       142 lm~lLil~li--~~faf~gg~~v~~r~L~DYs~WLq~rv~d~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lsp  219 (335)
                      ++++++++.+  .++.+.-.+++.+.-.++++.+.+++....+.+.+..+.+|++..|||.++. .     ||......+
T Consensus        81 ~~~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~~~CCG~~~~-~-----d~~~~~~~~  154 (221)
T PF00335_consen   81 LLILLFVLELVVGIVAFSYRDQLNSSLKDGLSLRCMKSYNSNESFSEAWDNIQEKFECCGVNSP-D-----DWFTSKWSS  154 (221)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHSSTT-CHHHHHHHHHHHHHT--SSTTC-H-----HHHHHHHHT
T ss_pred             chhhHHHHHHHHHHhhhhccccccccccccccchhhhccccccchhhheecccccccccCCCCC-c-----ccccccccc
Confidence            8777766643  2223321122222111111233344444556666666677777799999883 5     544322110


Q ss_pred             CCCcccCCCCCCCCCccCceeeecCCCCCcCCCCCCCCCCcccccCCCcccccccCCCCcccccCcchhhHHHHHHHHHH
Q 036418          220 IESGCCTPPAVCGMKFVNATSWIKGDNGAVNNTVPLDSDCDDENKLLDSDCDTWTNDRNVLCYDCQACKDGFVRTLESKW  299 (335)
Q Consensus       220 IqSGCCKPPt~Cg~~y~N~T~W~~~~~~~~~~~~~~~~~~~~~~~~~d~DC~~WsNd~~~LCy~C~SCKaGvL~~lr~~W  299 (335)
                       ++++..                                        .+++..++.+....++.++.|+..+.+.+++.+
T Consensus       155 -~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~gC~~~l~~~~~~~~  193 (221)
T PF00335_consen  155 -CSSPDS----------------------------------------CPDCQCPDDCSSENSIYTRGCYDKLREYLRSYL  193 (221)
T ss_dssp             --------------------------------------------------TCS-TTCCCCHCCTST-HHHHHHHHHCT--
T ss_pred             -cccccc----------------------------------------cccccccccccccccccCCChHHHHHHHHHHHH
Confidence             111100                                        024444555567778889999999999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036418          300 RKLGLFLVLMSLFLFVSHLFLFLATMW  326 (335)
Q Consensus       300 ~~~~i~ni~~~i~Li~~~~~~~~~~~~  326 (335)
                      +.++++.++++    ++++++++.+++
T Consensus       194 ~~~~~~~~~~~----~l~~~~~~~a~~  216 (221)
T PF00335_consen  194 KYIGIVSLAIL----VLQLIGIILACC  216 (221)
T ss_dssp             ---------------------------
T ss_pred             HHHHHHHHHHH----HHHHHHHHHHHH
Confidence            77766665554    444555555544

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=96.67  E-value=0.00048  Score=55.23  Aligned_cols=43  Identities=14%  Similarity=0.295  Sum_probs=30.2

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc---CCCCCCcccCCCCCCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK---LSPIESGCCTPPAVCGM  233 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~---lspIqSGCCKPPt~Cg~  233 (335)
                      ...|+.||.-|    .|||+++ +.     ||....   -.++|.+||+....|+.
T Consensus        29 ~~~~d~iQ~~l----~CCG~~~-~~-----Dw~~~~~~~~~~vP~SCC~~~~~C~~   74 (104)
T cd03161          29 SDAVDTVQRTL----HCCGVEN-YT-----DWLNSPYFLEKGIPLSCCKNRSDCSP   74 (104)
T ss_pred             HHHHHHHHhcC----cCcCCCC-hh-----hhhccccccCCCcCcccccCCCCCCc
Confidence            44688877666    9999988 46     553211   23699999987667864

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=96.19  E-value=0.0011  Score=53.63  Aligned_cols=47  Identities=9%  Similarity=0.258  Sum_probs=30.0

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc-CCCCCCcccCCC-CCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK-LSPIESGCCTPP-AVCG  232 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~-lspIqSGCCKPP-t~Cg  232 (335)
                      .+.|+.+|.-|    .|||+++ +++|....|+... -..||.+||+.+ ..|+
T Consensus        30 ~~~~d~iQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~vP~SCC~~~~~~C~   78 (105)
T cd03163          30 SRAVDYLQRQL----QCCGIHN-YTDWENTPWFKESKNNSVPLSCCKETFTSCT   78 (105)
T ss_pred             HHHHHHHHHhC----cccCCCC-HHHHhhchhhhcCCCCccCcCccCCCCCCcc
Confidence            56788888776    9999988 4644322222211 246999999654 3574

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=95.81  E-value=0.0014  Score=52.40  Aligned_cols=39  Identities=15%  Similarity=0.122  Sum_probs=26.4

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhccCCCCCCccc-CCCCCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCC-TPPAVCG  232 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lspIqSGCC-KPPt~Cg  232 (335)
                      .+.|+.+|.-|    .|||+++. .     ||+.   ..||.+|| .++..|+
T Consensus        34 ~~~~d~lQ~~l----~CCG~~~~-~-----d~~~---~~vP~SCcc~~~~~c~   73 (100)
T cd03154          34 KKSLEKFQKEL----KCCGLVNG-A-----DDWG---NDIPASCNCTTTQSDC   73 (100)
T ss_pred             HHHHHHHHHcC----CCCCCCCc-h-----hhcc---CCCCCCCcCCCCCCCc
Confidence            35688888766    99998773 4     5542   35999995 4445564

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=95.74  E-value=0.0067  Score=50.76  Aligned_cols=43  Identities=9%  Similarity=0.145  Sum_probs=27.4

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc-----CCCCCCcccCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK-----LSPIESGCCTPP  228 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~-----lspIqSGCCKPP  228 (335)
                      ...|+.||.-|    .|||+++ |.+|....|+...     -.+||.+||+.+
T Consensus        29 ~~~~d~iQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~   76 (120)
T cd03167          29 RFLIDQVQLGL----QCCGASS-YQDWQQNLYFNCSSPGVQACSLPASCCIDP   76 (120)
T ss_pred             HHHHHHHHHhc----cCCCCCC-hHHhcccccccCCCCCCCCCCCCcCccCCC
Confidence            35799888777    9999999 4643322222110     125999999754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=95.49  E-value=0.01  Score=49.25  Aligned_cols=44  Identities=9%  Similarity=0.011  Sum_probs=28.5

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc-----CCCCCCcccCCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK-----LSPIESGCCTPPA  229 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~-----lspIqSGCCKPPt  229 (335)
                      ...|+.+|.-|    .|||+++ |.+|....|+...     -.+||.+||++..
T Consensus        29 ~~~~d~lQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~~~~~vP~SCC~~~~   77 (119)
T cd03158          29 QNIIDFVQKEF----KCCGGDD-YRDWSKNMYFNCSSPNPEACGVPYSCCIRAK   77 (119)
T ss_pred             HHHHHHHHHHc----cCCCCCC-hhhcccccccccCCCCCcCCCcCcCcccCCC
Confidence            55688888777    9999998 5754332232211     1259999997653

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03157 TM4SF12_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF12_like family

Probab=95.43  E-value=0.014  Score=48.40  Aligned_cols=42  Identities=17%  Similarity=0.457  Sum_probs=29.6

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhc-cCCCCCCcccCCCC-CCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMK-KLSPIESGCCTPPA-VCG  232 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~-~lspIqSGCCKPPt-~Cg  232 (335)
                      ...|+.||.-|    .|||+++ +.     ||... ....||.+||+.++ .|+
T Consensus        32 ~~~~D~iQ~~l----~CCG~~~-~~-----DW~~~~~~~~vP~SCC~~~~~~C~   75 (103)
T cd03157          32 THAWNSFQTEF----KCCGVIY-FT-----DWLEMTEMEWPPDSCCSNQYPGCA   75 (103)
T ss_pred             HHHHHHHHHhc----cCccCCC-hh-----HHhccCCCCCCCccccCCCCCCcC
Confidence            44699998877    9999998 46     66432 11348999997654 575

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human transmembrane 4 superfamily member 12 (TM4SF12).

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=95.22  E-value=0.0082  Score=48.54  Aligned_cols=43  Identities=16%  Similarity=0.318  Sum_probs=28.3

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhh----ccCCCCCCcccCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTM----KKLSPIESGCCTPP  228 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~----~~lspIqSGCCKPP  228 (335)
                      +..||.||.-|    .|||+++ |.+|....|+.    ..-.+||.+||++.
T Consensus        32 ~~~~d~iQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~~~~vP~SCC~~~   78 (114)
T cd03156          32 TSTWNRVMIEL----KCCGVNG-PTDFVDSTSFFRQKNEPNSPYPESCCKRN   78 (114)
T ss_pred             HHHHHHHHhcc----cCcCCCC-cHHHHhhhHHhccCCCCCCcCCHHHcCcc
Confidence            55689888766    9999998 46332222211    12357999999754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=95.02  E-value=0.014  Score=48.68  Aligned_cols=42  Identities=10%  Similarity=0.018  Sum_probs=27.1

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc-------CCCCCCcccCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK-------LSPIESGCCTP  227 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~-------lspIqSGCCKP  227 (335)
                      .+.||.||.-|    .|||+++ +++|....|+...       -.+||.+||++
T Consensus        29 ~~~~D~iQ~~l----~CCG~~~-~~DW~~~~~~~~~~~~~~~~~~~vP~SCC~~   77 (121)
T cd03159          29 QNLIDFLQEYW----QCCGARG-PDDWNLNIYFNCTDSNPSRERCGVPFSCCVK   77 (121)
T ss_pred             HHHHHHHHHhc----cCCCCCC-hHHhcccccccccCCCCCCCCCCCCcccccC
Confidence            46799888777    9999999 4744322222110       02499999973

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=94.98  E-value=0.0058  Score=47.73  Aligned_cols=33  Identities=27%  Similarity=0.645  Sum_probs=25.4

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhccCCCCCCcccCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTP  227 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lspIqSGCCKP  227 (335)
                      ...|+.+|.-|    .|||+++ +.     ||.    +.+|.+||+.
T Consensus        29 ~~~~d~iQ~~l----~CCG~~~-~~-----Dw~----~~vP~SCC~~   61 (86)
T cd03164          29 SEAWDMIQSNL----QCCGING-TT-----DWG----SGVPSSCCSS   61 (86)
T ss_pred             HHHHHHHHHHh----cCCCCCC-hh-----hhC----CCCChhhcCC
Confidence            46688888777    9999887 35     774    3589999963

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=94.95  E-value=0.021  Score=45.55  Aligned_cols=43  Identities=14%  Similarity=0.331  Sum_probs=30.2

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhc---cCCCCCCcccCCC-CCCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMK---KLSPIESGCCTPP-AVCGM  233 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~---~lspIqSGCCKPP-t~Cg~  233 (335)
                      .+.|+.+|.-|    .|||+++ |.     ||...   .-.+||.+||+.+ ..|+.
T Consensus        29 ~~~~d~iQ~~l----~CCG~~~-~~-----Dw~~~~~~~~~~vP~SCC~~~~~~C~~   75 (99)
T cd03166          29 RKILDRMQKDL----KCCGANN-YT-----DWENIPSLDTDSVPDSCCINVTKGCGI   75 (99)
T ss_pred             HHHHHHHHHHh----cccCCCC-hh-----hhhcccCCCCCCCCcCccCcCCCCccc
Confidence            55799998887    9999998 46     55421   1246999999643 45763

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=94.79  E-value=0.018  Score=50.75  Aligned_cols=49  Identities=14%  Similarity=0.253  Sum_probs=34.2

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc---------------------C-CCCCCcccCC--CCCCCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK---------------------L-SPIESGCCTP--PAVCGMK  234 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~---------------------l-spIqSGCCKP--Pt~Cg~~  234 (335)
                      .+.||.+|.-+    .|||.++ +.+|....|....                     + ..||-|||+|  |..|+..
T Consensus        34 ~~~~D~lQ~~f----kCCG~~~-y~DW~~~~w~~n~y~~~~~~~~~~~~~~~~~~~~~~~~vP~SCc~~~~~~~C~~~  106 (143)
T cd03162          34 KKTIDMLQIEF----QCCGNNG-YRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLTDGVPFSCCNPSSPRPCIQH  106 (143)
T ss_pred             HHHHHHHHHhc----cCCCCCC-hhhhhhhhhhcccccCCCccchhhhhhcccccccccCCcCCcccCCCCCCchhhh
Confidence            34588888777    9999998 5766544444332                     2 5799999965  5679864

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=94.64  E-value=0.02  Score=45.33  Aligned_cols=42  Identities=19%  Similarity=0.446  Sum_probs=29.0

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhc-cCCCCCCcccCCC-CCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMK-KLSPIESGCCTPP-AVCG  232 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~-~lspIqSGCCKPP-t~Cg  232 (335)
                      ...|+.+|.-|    .|||+++ +.     ||... ....||.+||+.. ..|+
T Consensus        31 ~~~~d~~Q~~l----~CCG~~~-~~-----Dw~~~~~~~~vP~SCC~~~~~~C~   74 (98)
T cd03165          31 TNAWDITQTEF----RCCGVTN-YT-----DWYEVLGENRVPDSCCQEDSQDCG   74 (98)
T ss_pred             HHHHHHHHHhC----cCcCCCC-hh-----HHHHhcCCCCCCHhhcCCCccccc
Confidence            44688888776    9999988 46     66432 1246999999643 3574

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=94.63  E-value=0.024  Score=45.95  Aligned_cols=47  Identities=11%  Similarity=0.226  Sum_probs=28.9

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhc---cCCCCCCcccCCCC-CCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMK---KLSPIESGCCTPPA-VCG  232 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~---~lspIqSGCCKPPt-~Cg  232 (335)
                      ...|+.+|.-|    .|||+++ +.+|....|+..   .-..||.+||+... .|+
T Consensus        32 ~~~~d~iQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~~~vP~SCC~~~~~~c~   82 (110)
T cd03155          32 TLTVDELQQEF----KCCGSNN-YTDWQDSEWINSNEANGRLVPDSCCKTVVDRCG   82 (110)
T ss_pred             HHHHHHHHHhC----cCcCCCC-hhhhhhccccccCCCCCCCCCccccCCCCCCcc
Confidence            45688888766    9999998 463332222210   11369999997543 464

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=94.41  E-value=0.022  Score=46.84  Aligned_cols=43  Identities=9%  Similarity=0.251  Sum_probs=25.9

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhcc-CCCCCCcccCCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKK-LSPIESGCCTPP  228 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~-lspIqSGCCKPP  228 (335)
                      .+.|+.+|.-|    .|||+++ |.+|....|+... -..||.+||++.
T Consensus        33 ~~~~d~iQ~~l----~CCG~~~-~~Dw~~~~~~~~~~~~~vP~SCC~~~   76 (117)
T cd03160          33 EEAWDYVQFQL----QCCGWTG-PQDWTDNSLIKNSSEPLYPCSCCNSS   76 (117)
T ss_pred             HHHHHHHHhhC----cccCCCC-chhHHhchhccCCCCCCCCHhhhcCC
Confidence            44688887666    9999988 4633211111110 126999999754

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03127 tetraspanin_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL)

Probab=93.86  E-value=0.034  Score=42.59  Aligned_cols=37  Identities=16%  Similarity=0.243  Sum_probs=26.5

Q ss_pred             CCCchhhhhHhhhcCcccccccccCcccccchhhhccCCCCCCcccCC
Q 036418          180 NPNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTP  227 (335)
Q Consensus       180 d~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lspIqSGCCKP  227 (335)
                      ....|+.+|.-+    .|||+++. .     ||.. ....+|.+||++
T Consensus        28 ~~~~~d~iq~~l----~CCG~~~~-~-----D~~~-~~~~vP~SCc~~   64 (90)
T cd03127          28 FQEAMDALQSTF----ECCGVNGP-T-----DYLD-LRLLVPSSCCKG   64 (90)
T ss_pred             HHHHHHHHHHhC----cCcCCCCh-H-----HHcc-CCCCCCHhhcCC
Confidence            355788887766    99999883 5     6543 225699999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. The tetraspanin family contains CD9, CD63, CD37, CD53, CD82, CD151, and CD81, amongst others. Tetraspanins are involved in diverse processes such as cell activation and proliferation, adhesion and motility, differentiation, cancer, and others. Their various functions may relate to their ability to act as molecular facilitators, grouping specific cell-surface proteins and affecting formation and stability of signaling complexes. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web", which may also include integr

>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]

Probab=87.11  E-value=1.6  Score=47.05  Aligned_cols=66  Identities=20%  Similarity=0.255  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhheeeccCccccccccchHHHHHHHHHHHHHHHHHHHHhhCCCccHHHHHHHHHHHHHH
Q 036418           71 SGILAMISFIVSLPILASVIWLLYMRDYDCENLLRLPRLQTGIGIALLFMFIISTAALFLRPKFPMPGFLLAVVPLLVM  149 (335)
Q Consensus        71 l~~~Nfl~~l~Gi~ILg~GIWl~~~~~~~c~~~l~~P~ilI~iGv~illVsllGc~GA~~es~clL~~Y~ilm~lLil~  149 (335)
                      +.+.-+++.++|+.+++.|+|+..-+.        .++. ++.|+.+++.+++=    +++++--|++|.++++.-++-
T Consensus         3 ~~~~~~~~~~~gl~l~~gg~~l~~lgg--------s~yy-~iagl~~l~~~~ll----~~~k~aal~lya~~~~~t~~w   68 (773)
T COG4993           3 VTLTALVIALCGLALLIGGIWLVALGG--------SWYY-LIAGLVLLLSAWLL----LRRKRAALWLYALVLLGTLVW   68 (773)
T ss_pred             hhHHHHHHHHHHHHHhccceeEEeeCC--------chHH-HHHHHHHHHHHHHH----hccchhHHHHHHHHHHHHhHH
Confidence            345667889999999999999877542        2343 34588888877764    788999999998655544443

>cd03152 CD9_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD9 family

Probab=85.70  E-value=0.63  Score=36.23  Aligned_cols=28  Identities=14%  Similarity=0.163  Sum_probs=21.6

Q ss_pred             CchhhhhHhhhcCcccccccccCcccccchhhhccCCCCCCccc
Q 036418          182 NNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCC  225 (335)
Q Consensus       182 ~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lspIqSGCC  225 (335)
                      ..|+.||.-|    .|||.++ +.     ||      .+|.+|+
T Consensus        32 ~~~d~iQ~~l----~CCG~~~-~~-----D~------~vP~SC~   59 (84)
T cd03152          32 ETLKAIHFAL----DCCGPTG-GL-----EQ------FVTDTCP   59 (84)
T ss_pred             HHHHHHHHHH----cCCCCCC-Cc-----cc------ccCCCCC
Confidence            4699998888    9999888 35     66      2788873

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD9 is found in virtually all tissues and is potentially involved in developmental processes. It associates with the tetraspanins CD81 and CD63, as well as with some integrin, and has been shown to be involved in a variety of activation, adhesion, and cell motility functions, as well as cell-cell interactions - such as

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	7e-05

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 41.5 bits (96), Expect = 7e-05
 Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 23/45 (51%)

Query: 25 EKGA--KLEA---LPAPAPKAKNIPEEKAIIMTTEKAAPALSINA 64
          EK A  KL+A   L A                    +APAL+I A
Sbjct: 18 EKQALKKLQASLKLYAD------------------DSAPALAIKA 44

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	94.26

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=94.26  E-value=0.0093  Score=45.55  Aligned_cols=34  Identities=12%  Similarity=0.144  Sum_probs=25.7

Q ss_pred             CCchhhhhHhhhcCcccccccccCcccccchhhhccCCCCCCcccCC
Q 036418          181 PNNWNNIKSCIYDTKICDDLFLKSLTVKSYDFTMKKLSPIESGCCTP  227 (335)
Q Consensus       181 ~~~W~~I~sCL~~s~~C~gl~~~~~~~~~~D~~~~~lspIqSGCCKP  227 (335)
                      .+.|+.||.-|    .|||.++ +.     ||..   +++|.+||++
T Consensus        32 ~~~~d~iQ~~l----~CCG~~~-~~-----Dw~~---~~vP~ScC~~   65 (90)
T 1g8q_A           32 KAVVKTFHETL----DCCGSST-LT-----ALTT---SVLKNNLCPS   65 (90)
T ss_dssp             HHHHHHHHHHH----TCCSCTT-CG-----GGHH---HHHHTTCSCT
T ss_pred             HHHHHHHHHhh----cCCCCCC-hh-----hhcc---CCCCCCCCCC
Confidence            45899999888    9999877 45     6643   2478899964

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d1oedc_	260	Acetylcholine receptor protein, delta chain {Marbl	83.21

>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}

class: Membrane and cell surface proteins and peptides
fold: Neurotransmitter-gated ion-channel transmembrane pore
superfamily: Neurotransmitter-gated ion-channel transmembrane pore
family: Neurotransmitter-gated ion-channel transmembrane pore
domain: Acetylcholine receptor protein, delta chain
species: Marbled electric ray (Torpedo marmorata) [TaxId: 7788]

Probab=83.21  E-value=6.3  Score=32.72  Aligned_cols=36  Identities=14%  Similarity=0.468  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036418          293 RTLESKWRKLG-----LFLVLMSLFLFVSHLFLFLATMWEL  328 (335)
Q Consensus       293 ~~lr~~W~~~~-----i~ni~~~i~Li~~~~~~~~~~~~~~  328 (335)
                      +.++++|+.+|     ++.++++++.++.-+.+|+.+-+.+
T Consensus       216 ~~~~~EWk~vA~ViDRlfl~lF~i~~vi~ti~ifl~~~~~~  256 (260)
T d1oedc_         216 DEEVGNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNH  256 (260)
T ss_dssp             ----------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC
Confidence            45778999986     4555555555666677777765544