Citrus Sinensis ID: 036602

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFNSVTSKQMVKKDKNFLIPVSVCIVS
Secondary Structure (PSIPRED)
cHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccHHHcccccccccccccccccccccccccccccccccccEEccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHcccccccEccccccccEEEcccccccccccccHHHHHcccccccccEEEEEc
Coil and Loop (DISEMBL)
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLnlngkkqptMKEVAFELAGIRASIGASVLLQFegidfvdydnakhfktsssstgsffnsvtskqmvkkdknflipVSVCIVS
Flexible Loop (DISEMBL)
vflkvinenrlfevldaqvlreaekEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHfktsssstgsffNSVTSkqmvkkdknflipvsvcivs
Low Complexity Region (SEG)
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHfktsssstgsffnsvtsKQMVKKDKNFLIPVSVCIVS
Disordered region (IsUnstruct)
*FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHF*******************VKKDKNFLIPVSVCIV*
Disordered Region (DISOPRED)
VFLKV**ENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNL*GK*QPTMKEVAFELAG*******************************************************PVSVCIVS
Disordered Region (DISEMBL)
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFNSVTSKQMVKKDKNFLIPVSVCIVS
Disordered Region (DISPRO)
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFNSVTSKQMVKKDKNFLIPVSVCIVS
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VFLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFNSVTSKQMVKKDKNFLIPVSVCIVS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q7X8C5	748	Wall-associated receptor	yes	no	0.504	0.081	0.393	1e-08
Q9S9M2	761	Wall-associated receptor	no	no	0.504	0.080	0.409	2e-08
Q9SA25	720	Wall-associated receptor	no	no	0.454	0.076	0.436	3e-08
Q9C9L5	792	Wall-associated receptor	no	no	0.520	0.079	0.396	9e-08
Q8RY17	751	Wall-associated receptor	no	no	0.504	0.081	0.377	1e-07
Q9LN59	788	Putative wall-associated	no	no	0.628	0.096	0.389	5e-07
Q9LMN6	738	Wall-associated receptor	no	no	0.504	0.082	0.393	2e-06
Q9LMN7	733	Wall-associated receptor	no	no	0.487	0.080	0.389	2e-06
Q9S9M3	730	Wall-associated receptor	no	no	0.487	0.080	0.377	2e-06
Q8VYA3	769	Wall-associated receptor	no	no	0.495	0.078	0.35	3e-06

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 44/61 (72%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F++ + ENR+ +++D ++  E   ++V+++A +A+R LN  GKK+P M+EV+ EL  IR+
Sbjct: 632 FVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMIRS 691

Query: 62  S 62
           S
Sbjct: 692 S 692

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 41/61 (67%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  + ENR  +++D ++  E   ++V+ +A +AKR LN  GKK+P M+EV+ EL  IR+
Sbjct: 640 FVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERIRS 699

Query: 62  S 62
           S
Sbjct: 700 S 700

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/55 (43%), Positives = 41/55 (74%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFEL 56
           FL+ +  +RL E+LDA++  E ++EEV+ +A +A+R L+LN + +PTM++V  EL
Sbjct: 606 FLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIEL 660

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9C9L5|WAKLH_ARATH Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/63 (39%), Positives = 41/63 (65%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  + EN+LF+++DA++       +V   A VA++ LNL G+K+P+M+EV+ EL  IR 
Sbjct: 664 FILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDSIRM 723

Query: 62  SIG 64
             G
Sbjct: 724 PCG 726

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8RY17|WAKLI_ARATH Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 43/61 (70%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F + + +NR+ +++D+++      E+V+ +A +A+R L+L GKK+P M+EV+ EL  IR+
Sbjct: 637 FNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRS 696

Query: 62  S 62
           S
Sbjct: 697 S 697

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Required during plant's response to pathogen infection.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LN59|WAKLK_ARATH Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F   + ENR FE++DA++    + E+V+ +A +A+R LN  GKK+P M++V  +L  I A
Sbjct: 668 FRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILA 727

Query: 62  SIGASVLLQFEGIDFVD 78
           S   S L+  E  D  D
Sbjct: 728 SQEDS-LVNIENDDGAD 743

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F     ENRL E++D QV+ E  + E+   A +A     L G+++P MKEVA EL  +R 
Sbjct: 626 FASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALRV 685

Query: 62  S 62
           +
Sbjct: 686 T 686

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60
           F+  + ENRL E++D QV+ E  + E+   A +A     + G+++P+MKEVA EL  +R
Sbjct: 624 FVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEALR 682

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 2/61 (3%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           FL+ + ENR  +++D ++  + E ++V+ +A +A+R LN  G K+P M+EV+ +L  IR+
Sbjct: 644 FLEAMKENRAVDIIDIRI--KDESKQVMAVAKLARRCLNRKGNKRPNMREVSIKLERIRS 701

Query: 62  S 62
           S
Sbjct: 702 S 702

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 40/60 (66%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F   + ENRL +++DA++    +  +V   A +A++ LN+ G+K+P+M++V+ EL  IR+
Sbjct: 650 FTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIRS 709

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
255545824	727	kinase, putative [Ricinus communis] gi|2	0.809	0.134	0.524	3e-19
147852023	413	hypothetical protein VITISV_028337 [Viti	0.834	0.244	0.443	8e-14
255545828	694	kinase, putative [Ricinus communis] gi|2	0.520	0.090	0.587	2e-13
359491507	518	PREDICTED: wall-associated receptor kina	0.768	0.179	0.430	1e-12
147816247	705	hypothetical protein VITISV_007799 [Viti	0.768	0.131	0.430	1e-12
255541802	743	kinase, putative [Ricinus communis] gi|2	0.504	0.082	0.573	1e-12
147765961	679	hypothetical protein VITISV_007744 [Viti	0.826	0.147	0.435	2e-12
356532372	740	PREDICTED: wall-associated receptor kina	0.776	0.127	0.39	2e-12
356532451	712	PREDICTED: wall-associated receptor kina	0.487	0.082	0.542	7e-12
359475622	867	PREDICTED: wall-associated receptor kina	0.925	0.129	0.396	1e-11

>gi|255545824|ref|XP_002513972.1| kinase, putative [Ricinus communis] gi|223547058|gb|EEF48555.1| kinase, putative [Ricinus communis]

 Score = 99.0 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 3/101 (2%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           FL  + ENRLFE+LDA+VL+E  +EE+I +A +A++ LNLNGKK+P MK VA EL GIR+
Sbjct: 611 FLMTMEENRLFEILDARVLKEGGREEIIAMAKMAEKCLNLNGKKRPKMKTVAIELEGIRS 670

Query: 62  SIGASVLLQ--FEGIDFVDYDNAKHFKTSSSSTGSFFNSVT 100
           S G S  +Q  +E +D+V  D    +  +SSSTGS  NS T
Sbjct: 671 SQGVSSTIQQDYEEVDYVVGDYTASWDVASSSTGS-LNSTT 710

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147852023|emb|CAN82287.1| hypothetical protein VITISV_028337 [Vitis vinifera]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 66/106 (62%), Gaps = 5/106 (4%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  + E+RL ++LDA+V++E  KEE+  IA +AKR +NLNGKK+PTM EVA EL  IR 
Sbjct: 299 FIMSMKEDRLSDLLDARVVKEGRKEEINAIAFLAKRCINLNGKKRPTMMEVAMELERIRK 358

Query: 62  SIGASVLLQFEGIDFVDYDN---AKHFKTSSSSTGSFFNSVTSKQM 104
             G       E  D V+YD     + +  +S+STGS FN+  S  +
Sbjct: 359 CEGD--FNAQENSDEVEYDTIELTRPWDVASTSTGSCFNTNASPPL 402

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545828|ref|XP_002513974.1| kinase, putative [Ricinus communis] gi|223547060|gb|EEF48557.1| kinase, putative [Ricinus communis]

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/63 (58%), Positives = 50/63 (79%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           FL  + E+RLFE+LDA+VL+E  +EE+I +A +A++ LNLNGKK+P MK VA EL GIR+
Sbjct: 616 FLMTMEESRLFEILDARVLKEGGREEIIAMAKLAEKCLNLNGKKRPKMKTVAIELEGIRS 675

Query: 62  SIG 64
           S G
Sbjct: 676 SQG 678

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491507|ref|XP_003634286.1| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 60/93 (64%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  I E  LF++LDAQV++E  +EE++ +  VA + LNLNGKK+PTMKEVA EL  +++
Sbjct: 406 FILSIEETNLFDILDAQVVKEGGEEEIMAVVNVATQCLNLNGKKRPTMKEVALELERVKS 465

Query: 62  SIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGS 94
            +   V   FE  +++  +       +SSSTGS
Sbjct: 466 HLPLHVRGHFELAEYIRTEIIGPSDCASSSTGS 498

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147816247|emb|CAN64181.1| hypothetical protein VITISV_007799 [Vitis vinifera]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/93 (43%), Positives = 60/93 (64%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  I E  LF++LDAQV++E  +EE++ +  VA + LNLNGKK+PTMKEVA EL  +++
Sbjct: 593 FILSIEETNLFDILDAQVVKEGGEEEIMAVVNVATQCLNLNGKKRPTMKEVALELERVKS 652

Query: 62  SIGASVLLQFEGIDFVDYDNAKHFKTSSSSTGS 94
            +   V   FE  +++  +       +SSSTGS
Sbjct: 653 HLPLHVRGHFELAEYIRTEIIGPSDCASSSTGS 685

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541802|ref|XP_002511965.1| kinase, putative [Ricinus communis] gi|223549145|gb|EEF50634.1| kinase, putative [Ricinus communis]

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 48/61 (78%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           FL  + +NRLFE+LDA+VL+E  KEE++ +A +A+R LNLNGKK+PTM+ V  E+  IRA
Sbjct: 618 FLLSMEQNRLFEILDARVLKEGGKEEILAVAKLARRCLNLNGKKRPTMRTVVTEVERIRA 677

Query: 62  S 62
           S
Sbjct: 678 S 678

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147765961|emb|CAN70207.1| hypothetical protein VITISV_007744 [Vitis vinifera]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  +NE+RL ++LDAQV++E+ KEE+  IA +A+R +NLNGKK+PTM EVA EL  IR 
Sbjct: 574 FILSMNEDRLSDLLDAQVVKESRKEEINAIAFLARRCINLNGKKRPTMMEVAMELERIRK 633

Query: 62  SIGA-SVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFNSVTS 101
             G       FE I++   +    +  +S ST S  N+  S
Sbjct: 634 CQGDFRAQENFEEIEYNTTELIGPWDVTSISTDSCLNTNAS 674

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532372|ref|XP_003534747.1| PREDICTED: wall-associated receptor kinase-like 22-like [Glycine max]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/100 (39%), Positives = 60/100 (60%), Gaps = 6/100 (6%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  + ENRLF+++D +V++E EKE ++ +A +A R L LNGKK+PTMKEV  EL GIR 
Sbjct: 624 FILCLEENRLFDIVDERVVKEGEKEHIMAVANLASRCLELNGKKRPTMKEVTLELEGIRK 683

Query: 62  SIGASVLL------QFEGIDFVDYDNAKHFKTSSSSTGSF 95
             G S         + E +   DY +   + T+S+ + + 
Sbjct: 684 LEGKSNTQERHDDNELEHVPIGDYQSWTEYSTASNISSTL 723

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532451|ref|XP_003534786.1| PREDICTED: wall-associated receptor kinase-like 22-like [Glycine max]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 47/59 (79%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60
           FL  + ENRLF+++DA+V++E EKE++I +A +A+R L LNG+K+PTMKEV  EL  I+
Sbjct: 600 FLLCMEENRLFDIVDARVMQEGEKEDIIVVANLARRCLQLNGRKRPTMKEVTLELESIQ 658

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475622|ref|XP_003631717.1| PREDICTED: wall-associated receptor kinase-like 10-like, partial [Vitis vinifera]

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 4/116 (3%)

Query: 2   FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
           F+  +NE+RL ++LDAQV++E+ KEE+  IA +A+R +NLNGKK+PTM EVA EL  IR 
Sbjct: 589 FILSMNEDRLSDLLDAQVVKESRKEEINAIAFLARRCINLNGKKRPTMMEVAMELERIRK 648

Query: 62  SIGA-SVLLQFEGIDFVDYDNAKHFKTSSSSTGSFFN---SVTSKQMVKKDKNFLI 113
             G        E I++   +    +  +S ST S  N   S +S  ++ K + F +
Sbjct: 649 CQGDFGAQENSEEIEYNTIELIGPWDVTSISTDSCLNTNASSSSDLILDKQQRFRV 704

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2200552	730	WAKL1 "wall associated kinase-	0.504	0.083	0.409	6e-08
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.504	0.081	0.393	6.2e-08
TAIR|locus:2032875	720	AT1G16260 [Arabidopsis thalian	0.454	0.076	0.436	7.5e-08
TAIR|locus:2205040	792	AT1G69730 [Arabidopsis thalian	0.520	0.079	0.396	2.3e-07
TAIR|locus:2019893	751	RFO1 "RESISTANCE TO FUSARIUM O	0.504	0.081	0.377	4.5e-07
TAIR|locus:504956303	166	AT1G21245 [Arabidopsis thalian	0.454	0.331	0.454	4.8e-07
TAIR|locus:2016377	788	AT1G19390 [Arabidopsis thalian	0.628	0.096	0.389	6.1e-07
TAIR|locus:2014962	733	WAK5 "wall associated kinase 5	0.487	0.080	0.389	4e-06
TAIR|locus:2014952	738	WAK4 "wall associated kinase 4	0.504	0.082	0.393	5.1e-06
TAIR|locus:2094468	433	AT3G25490 [Arabidopsis thalian	0.495	0.138	0.433	6.5e-06

TAIR|locus:2200552 WAKL1 "wall associated kinase-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 25/61 (40%), Positives = 44/61 (72%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             FL+ + ENR+ +++D ++  E++ E+V+ +A +A++ LN  GK +P MKEV+ EL  IR+
Sbjct:   645 FLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRS 704

Query:    62 S 62
             S
Sbjct:   705 S 705

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 6.2e-08, P = 6.2e-08
 Identities = 24/61 (39%), Positives = 44/61 (72%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F++ + ENR+ +++D ++  E   ++V+++A +A+R LN  GKK+P M+EV+ EL  IR+
Sbjct:   632 FVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMIRS 691

Query:    62 S 62
             S
Sbjct:   692 S 692

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2032875 AT1G16260 [Arabidopsis thaliana (taxid:3702)]

 Score = 134 (52.2 bits), Expect = 7.5e-08, P = 7.5e-08
 Identities = 24/55 (43%), Positives = 41/55 (74%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFEL 56
             FL+ +  +RL E+LDA++  E ++EEV+ +A +A+R L+LN + +PTM++V  EL
Sbjct:   606 FLEAMRNDRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIEL 660

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2205040 AT1G69730 [Arabidopsis thaliana (taxid:3702)]

 Score = 130 (50.8 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 25/63 (39%), Positives = 41/63 (65%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F+  + EN+LF+++DA++       +V   A VA++ LNL G+K+P+M+EV+ EL  IR 
Sbjct:   664 FILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDSIRM 723

Query:    62 SIG 64
               G
Sbjct:   724 PCG 726

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2019893 RFO1 "RESISTANCE TO FUSARIUM OXYSPORUM 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 4.5e-07, P = 4.5e-07
 Identities = 23/61 (37%), Positives = 43/61 (70%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F + + +NR+ +++D+++      E+V+ +A +A+R L+L GKK+P M+EV+ EL  IR+
Sbjct:   637 FNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRS 696

Query:    62 S 62
             S
Sbjct:   697 S 697

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005618 "cell wall" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009620 "response to fungus" evidence=IMP

TAIR|locus:504956303 AT1G21245 [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 25/55 (45%), Positives = 33/55 (60%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFEL 56
             F+    ENRL E++D QVL E   +E+   A +A     L GK++P MKEVA EL
Sbjct:    57 FVSATEENRLHEIIDDQVLNEDNLKEIQEAARIAAECTRLMGKERPRMKEVAVEL 111

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2016377 AT1G19390 [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 30/77 (38%), Positives = 46/77 (59%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F   + ENR FE++DA++    + E+V+ +A +A+R LN  GKK+P M++V  +L  I A
Sbjct:   668 FRVAMKENRFFEIMDARIRDGCKPEQVMAVANLARRCLNSKGKKRPCMRKVFTDLEKILA 727

Query:    62 SIGASVLLQFEGIDFVD 78
             S   S L+  E  D  D
Sbjct:   728 SQEDS-LVNIENDDGAD 743

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014962 WAK5 "wall associated kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR 60
             F+  + ENRL E++D QV+ E  + E+   A +A     + G+++P+MKEVA EL  +R
Sbjct:   624 FVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEALR 682

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014952 WAK4 "wall associated kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F     ENRL E++D QV+ E  + E+   A +A     L G+++P MKEVA EL  +R 
Sbjct:   626 FASATKENRLHEIIDGQVMNENNQREIQKAARIAVECTRLTGEERPGMKEVAAELEALRV 685

Query:    62 S 62
             +
Sbjct:   686 T 686

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA;IMP

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2094468 AT3G25490 [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 6.5e-06, P = 6.5e-06
 Identities = 26/60 (43%), Positives = 35/60 (58%)

Query:     2 FLKVINENRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA 61
             F+    ENRL E++D QVL E  + E+   A VA     L G+++P M EVA EL  +RA
Sbjct:   324 FVLATKENRLHEIIDDQVLNEENQREIHEAARVAVECTRLKGEERPRMIEVAAELETLRA 383

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
KOG1187	361	consensus Serine/threonine protein kinase [Signal	98.74
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	97.25
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	95.92
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	95.34
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	95.24
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	95.16
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	95.15
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	95.05
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	95.04
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	95.02
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	95.01
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	94.86
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	94.84
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	94.8
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	94.72
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	94.65
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	94.64
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	94.63
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	94.56
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	94.53
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	94.51
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	94.42
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	94.36
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	94.35
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	94.31
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	94.3
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	94.25
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	94.23
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	94.2
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	94.2
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	94.17
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	94.16
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	94.11
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	94.09
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	94.09
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	94.07
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	94.05
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	93.99
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	93.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	93.85
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	93.84
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	93.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	93.74
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	93.74
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	93.64
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	93.61
PHA02988	283	hypothetical protein; Provisional	93.6
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	93.59
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	93.58
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	93.44
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	93.42
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	93.42
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	93.33
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	93.24
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	93.23
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	93.18
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	93.08
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	93.01
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	92.86
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	92.85
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	92.75
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	92.73
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	92.73
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	92.71
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	92.64
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	92.57
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	92.56
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	92.55
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	92.47
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	92.47
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	92.41
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	92.35
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	92.26
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	92.22
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	92.21
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	92.2
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	92.11
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	92.07
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	91.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	91.68
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	91.6
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	91.47
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	91.36
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	91.34
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	91.23
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	91.1
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	91.05
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	91.04
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	90.93
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	90.93
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	90.67
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	89.92
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	89.37
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	88.81
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	88.22
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	88.22
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	88.14
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	88.02
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	87.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	87.62
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	87.56
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	86.87
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	86.83
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	86.57
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	86.25
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	86.22
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	86.18
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	86.14
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	86.02
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	85.83
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	85.56
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	85.49
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	85.32
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	84.88
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	84.83
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	84.03
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	84.01
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	83.77
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	83.77
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	83.75
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	83.54
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	83.41
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	83.34
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	83.25
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	83.1
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	83.05
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	82.78
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	82.77
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	82.72
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	82.71
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	82.67
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	82.53
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	82.52
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	81.99
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	81.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	81.79
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	81.76
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	81.58
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	81.57
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	81.3
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	81.13
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	81.11
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	80.77
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	80.74
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	80.58
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	80.4
KOG1989	738	consensus ARK protein kinase family [Signal transd	80.19
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	80.14
PLN00009	294	cyclin-dependent kinase A; Provisional	80.09
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	80.05

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=1.3e-08  Score=79.90  Aligned_cols=60  Identities=33%  Similarity=0.429  Sum_probs=52.3

Q ss_pred             ChhhhhhcCCccceeccccc-ccccH-HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602            1 VFLKVINENRLFEVLDAQVL-REAEK-EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus         1 ~~~~~~~~~~~~eilD~~l~-~~~~~-e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      |++..+.++++.+++|++|. +.+.. +++.+++.+|++|++.++.+||+|.+|+.+|+.+.
T Consensus       292 w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  292 WAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             HHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence            56778888899999999997 55554 79999999999999999999999999999996554

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=97.25  E-value=0.00042  Score=59.99  Aligned_cols=52  Identities=13%  Similarity=0.207  Sum_probs=41.7

Q ss_pred             Cccceeccccccc--ccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           10 RLFEVLDAQVLRE--AEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        10 ~~~eilD~~l~~~--~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ....++|+.+...  ...+++..+.+++.+|++.+|.+||+|.+|++.|+.+..
T Consensus       900 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        900 HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            3455677776432  345778889999999999999999999999999988754

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=95.92  E-value=0.008  Score=43.95  Aligned_cols=31  Identities=6%  Similarity=0.153  Sum_probs=28.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||+|.+++.+|+.+
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            4677899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=95.34  E-value=0.019  Score=42.28  Aligned_cols=31  Identities=23%  Similarity=0.411  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|++||++.+++..|+.+
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         253 AEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            3577888999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=95.24  E-value=0.024  Score=42.01  Aligned_cols=34  Identities=9%  Similarity=0.048  Sum_probs=30.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+..+|++.+|.+||++.+|.++|+.+.+.
T Consensus       252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            3567899999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=95.16  E-value=0.027  Score=40.96  Aligned_cols=31  Identities=6%  Similarity=0.161  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||+|.+|...|+.+
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            4567899999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=95.15  E-value=0.027  Score=41.71  Aligned_cols=33  Identities=15%  Similarity=0.193  Sum_probs=28.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ..+..+...|++.+|.+||++.+++..|+.+-.
T Consensus       256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         256 EEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            356788899999999999999999999987643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=95.05  E-value=0.029  Score=41.42  Aligned_cols=32  Identities=13%  Similarity=0.185  Sum_probs=28.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+...|++.+|.+||++.+++..|+.+.
T Consensus       261 ~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         261 QELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            46778999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=95.04  E-value=0.028  Score=40.66  Aligned_cols=31  Identities=19%  Similarity=0.236  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||++.++.+.|+.+
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         231 QEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            4567888999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=95.02  E-value=0.03  Score=40.77  Aligned_cols=31  Identities=10%  Similarity=0.197  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+.++..+|++.+|.+||++.++...|+.+
T Consensus       235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         235 SALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            4567889999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=95.01  E-value=0.032  Score=40.59  Aligned_cols=31  Identities=10%  Similarity=0.214  Sum_probs=26.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||++.++.++|+.+
T Consensus       232 ~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         232 PKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            3566788899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=94.86  E-value=0.03  Score=40.63  Aligned_cols=30  Identities=10%  Similarity=0.209  Sum_probs=27.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|.+||+|.++...|+.
T Consensus       231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         231 KELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            567788899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=94.84  E-value=0.033  Score=41.03  Aligned_cols=32  Identities=16%  Similarity=0.233  Sum_probs=28.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+...|++.+|.+||+|.+++..|+.+.
T Consensus       251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         251 QEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            46788999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=94.80  E-value=0.031  Score=41.57  Aligned_cols=29  Identities=17%  Similarity=0.207  Sum_probs=26.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+.++..+|++.+|.+||+|.+|++.|+
T Consensus       266 ~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         266 SPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            35778999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=94.72  E-value=0.032  Score=41.19  Aligned_cols=29  Identities=17%  Similarity=0.241  Sum_probs=26.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+.++...|++.+|.+||++.++...|+
T Consensus       267 ~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         267 KDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            46788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=94.65  E-value=0.032  Score=40.24  Aligned_cols=28  Identities=7%  Similarity=0.176  Sum_probs=25.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+..+|++.+|.+||++.+|++.|
T Consensus       228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         228 QSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            4577899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=94.64  E-value=0.041  Score=40.74  Aligned_cols=34  Identities=9%  Similarity=0.025  Sum_probs=30.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+..+|++.+|.+||++.+|...|+.+.+.
T Consensus       249 ~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         249 KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            3578899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=94.63  E-value=0.041  Score=39.86  Aligned_cols=30  Identities=13%  Similarity=0.128  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|+..+|++||++.++...|+.
T Consensus       231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            356778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=94.56  E-value=0.044  Score=39.76  Aligned_cols=32  Identities=16%  Similarity=0.156  Sum_probs=27.8

Q ss_pred             HHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           28 VITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ...+..+..+|++.+|.+||++.++...|+.+
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            34677888899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=94.53  E-value=0.039  Score=41.90  Aligned_cols=31  Identities=16%  Similarity=0.148  Sum_probs=27.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..|...|++.+|.+||++.++++.|+.+.
T Consensus       305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         305 EIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            4678899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=94.51  E-value=0.043  Score=40.25  Aligned_cols=30  Identities=13%  Similarity=0.191  Sum_probs=26.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..|...|++.+|.+||++.++...|+.
T Consensus       253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         253 ARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            467788899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=94.42  E-value=0.048  Score=40.22  Aligned_cols=30  Identities=7%  Similarity=0.091  Sum_probs=26.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|.+||++.+++..|++
T Consensus       259 ~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         259 LELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            467789999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=94.36  E-value=0.052  Score=39.27  Aligned_cols=32  Identities=16%  Similarity=0.117  Sum_probs=28.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+...|++.+|.+||++.+++..|+.+.
T Consensus       229 ~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         229 DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            35678899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=94.35  E-value=0.047  Score=39.74  Aligned_cols=28  Identities=14%  Similarity=0.284  Sum_probs=24.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+..+..+|++.+|.+||+|.+|+.++.
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            4566777999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=94.31  E-value=0.058  Score=39.24  Aligned_cols=31  Identities=19%  Similarity=0.221  Sum_probs=27.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||++.++...|+.+
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            4567888999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=94.30  E-value=0.05  Score=39.36  Aligned_cols=31  Identities=13%  Similarity=0.119  Sum_probs=27.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|+..+|.+||++.++...|+.+
T Consensus       225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         225 QEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            4567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=94.25  E-value=0.049  Score=39.32  Aligned_cols=31  Identities=32%  Similarity=0.352  Sum_probs=26.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|+..+|.+||++.++..+|+.+
T Consensus       226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            4566788899999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=94.23  E-value=0.045  Score=40.05  Aligned_cols=28  Identities=21%  Similarity=0.350  Sum_probs=21.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+...|+..+|.+||+|.++.+.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            3466788999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=94.20  E-value=0.059  Score=39.52  Aligned_cols=32  Identities=16%  Similarity=0.255  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+..+|++.+|++||++.+++..|..+.+
T Consensus       247 ~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         247 ELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            46788899999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=94.20  E-value=0.053  Score=39.24  Aligned_cols=28  Identities=18%  Similarity=0.209  Sum_probs=25.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+..+|++.+|.+||+|.+++..|
T Consensus       228 ~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         228 MTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            3567899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=94.17  E-value=0.056  Score=39.35  Aligned_cols=31  Identities=13%  Similarity=0.101  Sum_probs=28.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+.++..+|++.+|.+||++.++...|+.+
T Consensus       242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5678899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=94.16  E-value=0.051  Score=41.71  Aligned_cols=32  Identities=19%  Similarity=0.169  Sum_probs=28.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+..+|++.+|.+||++.++++.|+.+.
T Consensus       303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            45778899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=94.11  E-value=0.059  Score=39.42  Aligned_cols=31  Identities=6%  Similarity=0.161  Sum_probs=27.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||++.+++..|..+
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~~l~~~  268 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILVSLNRM  268 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence            3567899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=94.09  E-value=0.06  Score=39.98  Aligned_cols=29  Identities=17%  Similarity=0.247  Sum_probs=26.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+.++..+|++.+|.+||+|.++.+.|+
T Consensus       267 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         267 DSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            46678999999999999999999999885

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=94.09  E-value=0.082  Score=39.00  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=28.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+..+|+..+|..||++.+++..|..+...
T Consensus       239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            456677899999999999999999999886644

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=94.07  E-value=0.068  Score=39.39  Aligned_cols=31  Identities=10%  Similarity=0.202  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+..+|++.+|.+||++.+++..|+.+
T Consensus       253 ~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         253 EEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            4677899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=94.05  E-value=0.072  Score=39.72  Aligned_cols=34  Identities=18%  Similarity=0.219  Sum_probs=29.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+..+|++.+|.+||+|.+++..|+.+...
T Consensus       266 ~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         266 NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            4566788899999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=93.99  E-value=0.071  Score=39.70  Aligned_cols=38  Identities=8%  Similarity=0.123  Sum_probs=31.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhccc
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIGAS   66 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~~~   66 (121)
                      ..+..+..+|++.+|.+||++.+++..|..+....+..
T Consensus       245 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~~  282 (297)
T cd05089         245 DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKAY  282 (297)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhccc
Confidence            34667889999999999999999999998877655443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=93.97  E-value=0.06  Score=38.76  Aligned_cols=29  Identities=17%  Similarity=0.270  Sum_probs=25.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.++.++|+
T Consensus       223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            45677889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=93.85  E-value=0.082  Score=39.53  Aligned_cols=34  Identities=21%  Similarity=0.252  Sum_probs=29.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|+..+|.+||+|.+|+..|..+...
T Consensus       269 ~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         269 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            4566788899999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=93.84  E-value=0.078  Score=38.65  Aligned_cols=30  Identities=7%  Similarity=0.199  Sum_probs=26.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+..+|++.+|.+||+|.++++.|+.+
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            557788899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=93.81  E-value=0.082  Score=38.34  Aligned_cols=32  Identities=6%  Similarity=0.051  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+..+|++.+|.+||++.+|.+.|+.++
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            44667788999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=93.74  E-value=0.094  Score=38.02  Aligned_cols=30  Identities=13%  Similarity=0.164  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+..+|++.+|.+||+|.+|.+.++.+
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            456677899999999999999999888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=93.74  E-value=0.062  Score=41.88  Aligned_cols=29  Identities=17%  Similarity=0.252  Sum_probs=26.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      .+..|...|++.+|.+||++.++++.|+.
T Consensus       345 ~l~~li~~cl~~dP~~RPs~~eil~~l~~  373 (375)
T cd05104         345 EMYDIMKSCWDADPLKRPTFKQIVQLIEQ  373 (375)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence            46678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=93.64  E-value=0.071  Score=38.63  Aligned_cols=28  Identities=11%  Similarity=0.204  Sum_probs=25.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+..+|+..+|++||+|.+++..|
T Consensus       228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            4578899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=93.61  E-value=0.078  Score=39.52  Aligned_cols=29  Identities=7%  Similarity=0.156  Sum_probs=25.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+.++..+|++.+|.+||+|.++...|+
T Consensus       275 ~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         275 QGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            35678889999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PHA02988 hypothetical protein; Provisional

Probab=93.60  E-value=0.1  Score=38.92  Aligned_cols=31  Identities=19%  Similarity=0.397  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+..+|++.+|.+||++.+++..|+.+.
T Consensus       250 ~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        250 EIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            4567788999999999999999999987654

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=93.59  E-value=0.085  Score=38.43  Aligned_cols=30  Identities=7%  Similarity=0.181  Sum_probs=26.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+...|++.+|.+||+|.++...|+.+
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         239 ALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            467788999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=93.58  E-value=0.084  Score=38.75  Aligned_cols=28  Identities=14%  Similarity=0.166  Sum_probs=25.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+..+...|++.+|.+||++.++...|+
T Consensus       254 ~~~~li~~cl~~~p~~RP~~~~i~~~l~  281 (283)
T cd05091         254 WVYTLMLECWNEFPSRRPRFKDIHSRLR  281 (283)
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence            4667889999999999999999999886

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=93.44  E-value=0.081  Score=38.24  Aligned_cols=30  Identities=20%  Similarity=0.325  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+..+|++.+|.+||++.++...|+.+
T Consensus       227 ~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         227 VVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            456788899999999999999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=93.42  E-value=0.078  Score=38.88  Aligned_cols=29  Identities=14%  Similarity=0.180  Sum_probs=25.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.+++..|+
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         248 DMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            35677899999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=93.42  E-value=0.093  Score=37.67  Aligned_cols=29  Identities=24%  Similarity=0.342  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+...|++.+|.+||++.++.+.|.
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            56778999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=93.33  E-value=0.11  Score=37.41  Aligned_cols=31  Identities=16%  Similarity=0.238  Sum_probs=27.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+...|+..+|.+||++.+++.+|+.+.
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            5667888999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=93.24  E-value=0.066  Score=38.90  Aligned_cols=28  Identities=11%  Similarity=0.326  Sum_probs=24.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+...|++.+|.+||++.++++.|
T Consensus       230 ~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         230 TELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            3467788899999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=93.23  E-value=0.24  Score=37.55  Aligned_cols=34  Identities=15%  Similarity=0.263  Sum_probs=29.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||+|.+++..|+.+...
T Consensus       263 ~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         263 HELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            4567888999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=93.18  E-value=0.093  Score=40.18  Aligned_cols=31  Identities=13%  Similarity=0.146  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+.++...|++.+|.+||++.+++..|+.+.
T Consensus       310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            4678889999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=93.08  E-value=0.14  Score=38.45  Aligned_cols=32  Identities=19%  Similarity=0.289  Sum_probs=28.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+..+|++.+|.+||++.++...|..+..
T Consensus       264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            56678899999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=93.01  E-value=0.12  Score=37.73  Aligned_cols=31  Identities=6%  Similarity=0.095  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+.++...|++.+|.+||++.++.+.|.++
T Consensus       235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         235 NLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            3566788899999999999999999988653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=92.86  E-value=0.14  Score=38.41  Aligned_cols=30  Identities=20%  Similarity=0.256  Sum_probs=26.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|++||++.+++..|+.
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~  300 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGK  300 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence            356778899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=92.85  E-value=0.13  Score=37.19  Aligned_cols=30  Identities=13%  Similarity=0.193  Sum_probs=26.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|+..+|.+||++.++...|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         230 ISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            457788999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=92.75  E-value=0.14  Score=37.34  Aligned_cols=29  Identities=7%  Similarity=0.079  Sum_probs=25.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+...|++.+|.+||++.+|...|+
T Consensus       251 ~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         251 SEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            45677889999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=92.73  E-value=0.12  Score=40.22  Aligned_cols=30  Identities=20%  Similarity=0.278  Sum_probs=26.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+..+|++.+|.+||++.+++++|+.+
T Consensus       343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            456777899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=92.73  E-value=0.16  Score=36.91  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=25.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|.+||++.++.+.|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         230 ESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            345667789999999999999999998864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=92.71  E-value=0.16  Score=36.88  Aligned_cols=28  Identities=14%  Similarity=0.185  Sum_probs=25.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+..+..+|++.+|.+||++.++...|+
T Consensus       241 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         241 KIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            4567888999999999999999999885

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=92.64  E-value=0.17  Score=36.80  Aligned_cols=31  Identities=10%  Similarity=0.064  Sum_probs=27.7

Q ss_pred             HHHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           28 VITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      -..+.++..+|++.+|.+||++.++...|+.
T Consensus       229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~  259 (262)
T cd05071         229 PESLHDLMCQCWRKEPEERPTFEYLQAFLED  259 (262)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence            3567789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=92.57  E-value=0.16  Score=36.84  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=26.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|++||++.++...|+.
T Consensus       230 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         230 EELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            356678889999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=92.56  E-value=0.15  Score=37.00  Aligned_cols=30  Identities=10%  Similarity=0.092  Sum_probs=26.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|++||++.++...|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         230 EELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            357778889999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=92.55  E-value=0.13  Score=37.35  Aligned_cols=29  Identities=7%  Similarity=0.184  Sum_probs=24.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.+++..|+
T Consensus       228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            45677888999999999999999988763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=92.47  E-value=0.16  Score=37.29  Aligned_cols=29  Identities=3%  Similarity=0.082  Sum_probs=25.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.+|++.|+
T Consensus       248 ~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         248 GPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            35667889999999999999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=92.47  E-value=0.12  Score=38.06  Aligned_cols=27  Identities=15%  Similarity=0.399  Sum_probs=24.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      .+..+...|++.+|.+||++.+++..|
T Consensus       247 ~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         247 ELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            467788999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=92.41  E-value=0.13  Score=37.39  Aligned_cols=29  Identities=21%  Similarity=0.236  Sum_probs=26.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+...|++.+|.+||++.++...|+
T Consensus       248 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         248 DKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            46678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=92.35  E-value=0.17  Score=37.92  Aligned_cols=35  Identities=6%  Similarity=0.127  Sum_probs=29.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+..+|++.+|.+||++.+++..|..+.....
T Consensus       251 ~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         251 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence            46678899999999999999999999987754433

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=92.26  E-value=0.15  Score=36.80  Aligned_cols=29  Identities=14%  Similarity=0.269  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.+++..|+
T Consensus       224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         224 ADVYVLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence            34567888999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=92.22  E-value=0.14  Score=36.70  Aligned_cols=29  Identities=17%  Similarity=0.232  Sum_probs=25.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.++...|+
T Consensus       222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            35777888999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=92.21  E-value=0.17  Score=38.11  Aligned_cols=34  Identities=15%  Similarity=0.411  Sum_probs=29.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||++.+++..|..+...
T Consensus       238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            3567788999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=92.20  E-value=0.15  Score=37.66  Aligned_cols=31  Identities=19%  Similarity=0.188  Sum_probs=27.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+...|++.+|.+||+|.++++.|+..
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         248 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            4577888999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=92.11  E-value=0.18  Score=37.62  Aligned_cols=34  Identities=24%  Similarity=0.419  Sum_probs=29.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|+..+|++||+|.+++..|..+...
T Consensus       238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            3567788999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=92.07  E-value=0.18  Score=36.56  Aligned_cols=29  Identities=14%  Similarity=0.166  Sum_probs=25.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      .+..+-..|++.+|.+||+|.+|...|+.
T Consensus       226 ~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         226 EMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            45578889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=91.94  E-value=0.19  Score=36.23  Aligned_cols=29  Identities=21%  Similarity=0.108  Sum_probs=25.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.++...|.
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            45677888999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=91.68  E-value=0.19  Score=39.94  Aligned_cols=31  Identities=6%  Similarity=0.118  Sum_probs=27.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..+...|++.+|..||++++++..|+.+
T Consensus       369 ~~l~~li~~cl~~~P~~RPs~~ell~~L~~~  399 (401)
T cd05107         369 DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL  399 (401)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            3566788899999999999999999999865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=91.60  E-value=0.24  Score=36.08  Aligned_cols=32  Identities=19%  Similarity=0.312  Sum_probs=27.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+..+|+..+|.+||++.++...|+.+..
T Consensus       236 ~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         236 TLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            56667789999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=91.47  E-value=0.25  Score=35.66  Aligned_cols=30  Identities=10%  Similarity=0.090  Sum_probs=26.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+..+|++.+|.+||++.++...|+.
T Consensus       231 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         231 EELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            356778899999999999999999988864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=91.36  E-value=0.2  Score=39.77  Aligned_cols=32  Identities=9%  Similarity=0.132  Sum_probs=28.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+.
T Consensus       367 ~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            35678889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=91.34  E-value=0.2  Score=35.73  Aligned_cols=29  Identities=17%  Similarity=0.216  Sum_probs=25.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+...|++.+|.+||++.++...|+
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         234 DELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            45677888999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=91.23  E-value=0.28  Score=35.92  Aligned_cols=35  Identities=14%  Similarity=0.307  Sum_probs=28.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..+...|++.+|..||++.++...|..+...+
T Consensus       238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            34567888999999999999999999887765443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=91.10  E-value=0.18  Score=36.81  Aligned_cols=28  Identities=11%  Similarity=0.319  Sum_probs=24.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..|...|++.+|.+||++.+++..|
T Consensus       234 ~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         234 KELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            3466788899999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=91.05  E-value=0.24  Score=36.48  Aligned_cols=29  Identities=7%  Similarity=0.131  Sum_probs=25.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||++.++...|+
T Consensus       251 ~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         251 PEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            34667889999999999999999998885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=91.04  E-value=0.28  Score=35.99  Aligned_cols=29  Identities=10%  Similarity=0.224  Sum_probs=24.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      .+..+...|++.+|.+||++.++.+.|..
T Consensus       254 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         254 RMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            45667789999999999999999988753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=90.93  E-value=0.21  Score=35.90  Aligned_cols=28  Identities=14%  Similarity=0.345  Sum_probs=25.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+...|+..+|.+||++.++++.|
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            5677888999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=90.93  E-value=0.28  Score=35.66  Aligned_cols=31  Identities=10%  Similarity=0.085  Sum_probs=26.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+.++-.+|.+.++++||++.+|.+.|+.+
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            4556788899999999999999999988754

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=90.67  E-value=0.36  Score=32.90  Aligned_cols=31  Identities=3%  Similarity=-0.057  Sum_probs=27.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+..+|++.+|.+||++.+++..+..+.
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      140 SFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             hHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            4788899999999999999999998876653

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=89.92  E-value=0.32  Score=34.80  Aligned_cols=26  Identities=27%  Similarity=0.395  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+|++
T Consensus       236 ~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         236 SELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhh
Confidence            45677888999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=89.37  E-value=0.33  Score=34.64  Aligned_cols=28  Identities=18%  Similarity=0.150  Sum_probs=23.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFEL   56 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L   56 (121)
                      ..+..+..+|+..+|.+||++.++...|
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      231 PEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            3566788899999999999999988754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=88.81  E-value=0.5  Score=34.36  Aligned_cols=29  Identities=21%  Similarity=0.332  Sum_probs=25.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ..+..+..+|++.+|.+||+..+++..|.
T Consensus       246 ~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         246 SRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            35678999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=88.22  E-value=0.43  Score=34.87  Aligned_cols=26  Identities=15%  Similarity=0.280  Sum_probs=22.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||+|.+++.
T Consensus       257 ~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         257 GLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHHHHhcCCcccchhHHHHhc
Confidence            34677899999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=88.22  E-value=0.44  Score=34.21  Aligned_cols=25  Identities=8%  Similarity=0.278  Sum_probs=22.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+..+|++.+|.+||+|++|+.
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         228 DLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhh
Confidence            4667788999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=88.14  E-value=0.52  Score=33.70  Aligned_cols=26  Identities=12%  Similarity=0.180  Sum_probs=22.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|++||+|.++++
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhh
Confidence            35677888999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=88.02  E-value=0.4  Score=35.02  Aligned_cols=25  Identities=12%  Similarity=-0.012  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+..+|++.+|.+||+|.++..
T Consensus       255 ~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         255 DGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhc
Confidence            4667889999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=87.97  E-value=0.55  Score=32.76  Aligned_cols=26  Identities=15%  Similarity=0.083  Sum_probs=23.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|+..+|.+||++.++++
T Consensus       215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      215 PEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHHccCCchhccCHHHHhh
Confidence            46778999999999999999999985

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=87.62  E-value=0.78  Score=33.55  Aligned_cols=33  Identities=21%  Similarity=0.376  Sum_probs=28.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|+..+|..||++.++...|..+...
T Consensus       239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         239 DVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            456778899999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=87.56  E-value=0.62  Score=34.06  Aligned_cols=26  Identities=23%  Similarity=0.227  Sum_probs=23.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||+|.+++.
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            45677889999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=86.87  E-value=0.72  Score=33.99  Aligned_cols=26  Identities=15%  Similarity=0.123  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+-..|++.+|.+||+|.+++.
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            35677889999999999999999887

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=86.83  E-value=0.64  Score=33.75  Aligned_cols=26  Identities=15%  Similarity=0.148  Sum_probs=23.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..++.+...|++.+|.+||++.+++.
T Consensus       258 ~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         258 PSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            45678999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=86.57  E-value=0.5  Score=34.49  Aligned_cols=26  Identities=19%  Similarity=0.121  Sum_probs=22.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|+..+|.+||++.+++.
T Consensus       259 ~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         259 SPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             hHHHHHHHHHhccCchhcccHHHHhc
Confidence            45678889999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=86.25  E-value=0.8  Score=33.37  Aligned_cols=26  Identities=23%  Similarity=0.207  Sum_probs=22.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++++++.
T Consensus       254 ~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         254 PEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhh
Confidence            45778899999999999999999864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=86.22  E-value=0.66  Score=34.08  Aligned_cols=30  Identities=10%  Similarity=0.004  Sum_probs=24.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAG   58 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~   58 (121)
                      ..+..+...|++.+|.+||++.++......
T Consensus       240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         240 EDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            356678889999999999999999886433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=86.18  E-value=0.68  Score=33.16  Aligned_cols=26  Identities=15%  Similarity=0.245  Sum_probs=22.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhc
Confidence            35677889999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=86.14  E-value=0.6  Score=33.39  Aligned_cols=25  Identities=12%  Similarity=0.181  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.+++.
T Consensus       228 ~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         228 EFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHhcChhhCcCHHHHhc
Confidence            4566778999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=86.02  E-value=0.82  Score=33.16  Aligned_cols=25  Identities=8%  Similarity=0.092  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+..+|++.+|.+||++.+++.
T Consensus       240 ~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         240 EAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHHh
Confidence            4567788999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=85.83  E-value=0.82  Score=32.31  Aligned_cols=26  Identities=23%  Similarity=0.244  Sum_probs=21.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||++.+++.
T Consensus       231 ~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         231 EEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            34666778999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=85.56  E-value=0.93  Score=33.15  Aligned_cols=26  Identities=15%  Similarity=0.273  Sum_probs=22.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+...|++.+|.+||++.+++..
T Consensus       258 ~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         258 EFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhhc
Confidence            46677889999999999999998764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=85.49  E-value=0.72  Score=32.97  Aligned_cols=25  Identities=20%  Similarity=0.390  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.+++.
T Consensus       228 ~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         228 DLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            4567788999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=85.32  E-value=1.4  Score=33.34  Aligned_cols=28  Identities=11%  Similarity=0.100  Sum_probs=24.3

Q ss_pred             HHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           27 EVITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .-..+..+..+|++.+|.+||++.++++
T Consensus       280 ~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         280 FSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             hhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            4456788999999999999999999975

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=84.88  E-value=0.92  Score=32.96  Aligned_cols=26  Identities=15%  Similarity=0.056  Sum_probs=22.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||++.+++.
T Consensus       253 ~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         253 AEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHHHHHhccCcccccCHHHHhh
Confidence            56677889999999999999998864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=84.83  E-value=1.1  Score=32.73  Aligned_cols=24  Identities=29%  Similarity=0.205  Sum_probs=19.0

Q ss_pred             HHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           33 MVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        33 ~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      ++-..|. .+|.+||++.++++.|.
T Consensus       244 ~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         244 EVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHh-hCcccCCCHHHHHHHhc
Confidence            3445687 57999999999998873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=84.03  E-value=0.96  Score=32.33  Aligned_cols=25  Identities=4%  Similarity=0.301  Sum_probs=20.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|++||++.+++.
T Consensus       229 ~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         229 DLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhh
Confidence            3556667899999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=84.01  E-value=1.1  Score=32.42  Aligned_cols=26  Identities=12%  Similarity=0.056  Sum_probs=22.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       254 ~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         254 PQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHHHHhccCcccCcCHHHHhh
Confidence            45678899999999999999999874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=83.77  E-value=0.86  Score=33.22  Aligned_cols=24  Identities=13%  Similarity=0.004  Sum_probs=20.5

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-.+|++.+|.+||++.++..
T Consensus       258 ~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         258 GLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhc
Confidence            346778999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=83.77  E-value=0.99  Score=32.24  Aligned_cols=26  Identities=15%  Similarity=0.273  Sum_probs=22.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+.++-..|++.+|.+||++.++++
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            56778888999999999999999874

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=83.75  E-value=0.92  Score=31.91  Aligned_cols=26  Identities=23%  Similarity=0.236  Sum_probs=21.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||++.++..
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            34667778999999999999999864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=83.54  E-value=0.9  Score=34.00  Aligned_cols=26  Identities=19%  Similarity=0.268  Sum_probs=22.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+..+|++.+|++||++.++...
T Consensus       262 ~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         262 EFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            36678889999999999999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=83.41  E-value=1.1  Score=32.93  Aligned_cols=26  Identities=23%  Similarity=0.166  Sum_probs=22.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+.++...|++.+|.+||++.+++.
T Consensus       256 ~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         256 DDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            45667888999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=83.34  E-value=1.2  Score=32.47  Aligned_cols=28  Identities=21%  Similarity=0.154  Sum_probs=23.8

Q ss_pred             HHHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           28 VITIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      -..+..+...|++.+|.+||++.+++..
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         226 SKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            3457788899999999999999999653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=83.25  E-value=1  Score=32.39  Aligned_cols=25  Identities=20%  Similarity=0.154  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|+..+|.+||++.+++.
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhc
Confidence            4567788999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=83.10  E-value=1.1  Score=33.98  Aligned_cols=25  Identities=12%  Similarity=0.108  Sum_probs=22.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|++||++.+++.
T Consensus       276 ~l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         276 DFQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhc
Confidence            4567888999999999999999976

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=83.05  E-value=0.87  Score=34.38  Aligned_cols=25  Identities=12%  Similarity=0.178  Sum_probs=22.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+..+|++.+|.+||++.+++.
T Consensus       282 ~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         282 HFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             HHHHHHHHHHhhCchhcCCHHHHhc
Confidence            5667889999999999999999976

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=82.78  E-value=1.1  Score=33.25  Aligned_cols=26  Identities=8%  Similarity=0.111  Sum_probs=22.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       269 ~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         269 EHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            35667888999999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=82.77  E-value=0.77  Score=33.22  Aligned_cols=27  Identities=30%  Similarity=0.250  Sum_probs=22.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      ..+..+..+|++.+|.+||++.+++..
T Consensus       239 ~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         239 STFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            355677789999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=82.72  E-value=1  Score=30.31  Aligned_cols=27  Identities=19%  Similarity=0.317  Sum_probs=24.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      ..+.++...|++.+|.+||++.+++..
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            678889999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=82.71  E-value=1  Score=33.11  Aligned_cols=26  Identities=8%  Similarity=0.069  Sum_probs=22.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||++.++..
T Consensus       261 ~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         261 RSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            34667889999999999999999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=82.67  E-value=1.2  Score=32.44  Aligned_cols=25  Identities=12%  Similarity=0.109  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.+++.
T Consensus       258 ~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         258 PALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHHHHHhcCCccccCCHHHHhc
Confidence            4567888999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=82.53  E-value=1.3  Score=31.76  Aligned_cols=26  Identities=12%  Similarity=0.273  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+-.+|++.+|.+||++.+++..
T Consensus       227 ~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         227 ELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            34567779999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=82.52  E-value=1.2  Score=32.33  Aligned_cols=25  Identities=24%  Similarity=0.268  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|+..+|++||++.+++.
T Consensus       226 ~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         226 PFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhh
Confidence            4566778899999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=81.99  E-value=1.4  Score=31.85  Aligned_cols=25  Identities=16%  Similarity=0.198  Sum_probs=21.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.+++.
T Consensus       244 ~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         244 KFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhh
Confidence            4566778999999999999998864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=81.94  E-value=1.3  Score=32.26  Aligned_cols=24  Identities=13%  Similarity=0.047  Sum_probs=20.4

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-.+|++.+|.+||++.+++.
T Consensus       257 ~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         257 GRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHHHhcCCCcccCCCHHHHhc
Confidence            345778999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=81.79  E-value=1.5  Score=31.86  Aligned_cols=26  Identities=19%  Similarity=0.049  Sum_probs=21.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|.+||++.+++.
T Consensus       258 ~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         258 EEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             HHHHHHHHHHhccCCccCCCHHHHhc
Confidence            34567888999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=81.76  E-value=1.4  Score=31.52  Aligned_cols=26  Identities=19%  Similarity=0.208  Sum_probs=21.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         238 KSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            34567888999999999999999874

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=81.58  E-value=1.3  Score=32.73  Aligned_cols=26  Identities=15%  Similarity=0.050  Sum_probs=22.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+..+|++.+|++||++.+++.
T Consensus       287 ~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         287 SQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            34677888999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=81.57  E-value=1.4  Score=31.95  Aligned_cols=26  Identities=15%  Similarity=0.194  Sum_probs=21.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+-..|++.+|.+||+|.+|+.
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         243 PVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            34566778999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=81.30  E-value=1.6  Score=31.87  Aligned_cols=26  Identities=23%  Similarity=0.233  Sum_probs=22.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+..+|++.+|.+||++.+++..
T Consensus       228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         228 PLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHhC
Confidence            45677889999999999999999873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=81.13  E-value=1.2  Score=32.62  Aligned_cols=25  Identities=8%  Similarity=0.146  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++..
T Consensus       228 ~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         228 KFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhc
Confidence            3566777899999999999999875

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=81.11  E-value=1.4  Score=32.32  Aligned_cols=26  Identities=19%  Similarity=0.149  Sum_probs=22.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.++..
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            35677888999999999999999876

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=80.77  E-value=1.6  Score=31.72  Aligned_cols=26  Identities=15%  Similarity=-0.001  Sum_probs=22.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       256 ~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         256 PEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhh
Confidence            56677889999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=80.74  E-value=1.4  Score=32.52  Aligned_cols=27  Identities=15%  Similarity=0.228  Sum_probs=22.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      ..+..+..+|++.+|.+||++.+++..
T Consensus       247 ~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         247 PDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            346677789999999999999998763

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=80.58  E-value=1.8  Score=32.99  Aligned_cols=25  Identities=12%  Similarity=0.185  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.++..
T Consensus       274 ~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         274 EFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             HHHHHHHHhccCCcccCcCHHHHhh
Confidence            3567889999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=80.40  E-value=1.8  Score=31.43  Aligned_cols=24  Identities=25%  Similarity=0.351  Sum_probs=19.1

Q ss_pred             HHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           33 MVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        33 ~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+-..|. .+|.+||++.++...|.
T Consensus       245 ~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         245 EVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHHHh-cCcccCCCHHHHHHHhc
Confidence            3445676 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=80.19  E-value=2.6  Score=36.56  Aligned_cols=51  Identities=12%  Similarity=0.111  Sum_probs=35.2

Q ss_pred             ccceecccccccccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           11 LFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        11 ~~eilD~~l~~~~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      -..|++....-......-..+..|-..|++.+|.+||++-+|...+-.+..
T Consensus       263 ~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  263 KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence            445666554211122344555666678999999999999999998877654

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=80.14  E-value=1.4  Score=33.45  Aligned_cols=26  Identities=19%  Similarity=0.207  Sum_probs=22.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+..+|++.+|.+||++.+++..
T Consensus       267 ~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         267 KALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            46688999999999999999998874

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=80.09  E-value=1.6  Score=32.19  Aligned_cols=25  Identities=16%  Similarity=0.096  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+..+|++.+|++||++.+++.
T Consensus       259 ~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        259 AGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            3567888999999999999999886

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=80.05  E-value=2.6  Score=32.36  Aligned_cols=31  Identities=19%  Similarity=0.375  Sum_probs=25.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      +.+.++-..|++.+|..||+..++...++.+
T Consensus       270 e~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  270 EALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            3455677799999999999999999888754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	121
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	97.35
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	97.29
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	96.83
4aoj_A	329	High affinity nerve growth factor receptor; transf	96.44
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	96.16
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	96.09
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	96.04
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	95.77
3soc_A	322	Activin receptor type-2A; structural genomics cons	95.72
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	95.63
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	95.59
3q4u_A	301	Activin receptor type-1; structural genomics conso	95.42
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	95.42
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	95.31
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	95.04
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	94.86
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	94.77
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	94.75
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	94.72
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	94.7
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	94.68
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	94.59
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	94.57
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	94.57
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	94.51
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	94.47
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	94.46
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	94.43
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	94.41
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	94.41
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	94.35
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	94.27
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	94.15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	94.12
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	94.09
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	94.08
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	94.06
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	94.04
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	94.03
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	94.01
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	93.91
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	93.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	93.86
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	93.83
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	93.82
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	93.81
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	93.77
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	93.75
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	93.74
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	93.72
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	93.71
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	93.67
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	93.63
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	93.63
3pls_A	298	Macrophage-stimulating protein receptor; protein k	93.59
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	93.58
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	93.33
2a19_B	284	Interferon-induced, double-stranded RNA-activated	93.32
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	93.28
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	93.28
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	93.25
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	93.22
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	93.09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	93.08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	93.07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	92.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	92.9
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	92.85
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	92.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	92.72
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	92.59
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	92.52
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	92.5
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	92.42
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	92.4
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	92.27
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	92.19
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	92.17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	92.16
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	91.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	91.81
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	91.81
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	90.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	90.55
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	89.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	89.75
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	89.54
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	87.69
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	86.43
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	85.73
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	85.58
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	85.37
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	85.24
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	85.15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	84.93
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	84.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	84.9
3fme_A	290	Dual specificity mitogen-activated protein kinase;	84.71
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	84.67
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	84.43
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	84.37
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	83.98
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	83.63
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	83.57
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	83.5
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	83.39
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	83.33
3bhy_A	283	Death-associated protein kinase 3; death associate	83.24
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	83.21
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	83.15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	83.12
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	82.92
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	82.9
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	82.51
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	82.5
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	82.36
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	82.35
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	82.34
2dyl_A	318	Dual specificity mitogen-activated protein kinase	82.12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	81.98
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	81.73
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	81.7
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	81.7
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	81.62
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	81.58
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	81.53
3uqc_A	286	Probable conserved transmembrane protein; structur	81.24
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	80.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	80.81
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	80.74
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	80.67
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	80.58
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	80.51
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	80.1
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	80.09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	80.04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=97.35  E-value=0.00021  Score=52.58  Aligned_cols=51  Identities=25%  Similarity=0.270  Sum_probs=42.2

Q ss_pred             CCccceecccccccccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602            9 NRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus         9 ~~~~eilD~~l~~~~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .....+++..+......+....+..+...|++.+|.+||++.++++.|+..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            344566666666566777888999999999999999999999999999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=97.29  E-value=0.00032  Score=51.67  Aligned_cols=53  Identities=19%  Similarity=0.317  Sum_probs=42.9

Q ss_pred             CCccceecccccccccHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602            9 NRLFEVLDAQVLREAEKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus         9 ~~~~eilD~~l~~~~~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      +.+..++|+.+......+....+..+...|++.+|.+||++.++++.|+.+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            34556667766555566777888899999999999999999999999988754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=96.83  E-value=0.0011  Score=49.29  Aligned_cols=37  Identities=16%  Similarity=0.183  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           25 KEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        25 ~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .++...+.+|..+|++.+|.+||+|.+|++.|+.+..
T Consensus       261 ~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            3566778899999999999999999999999998764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=96.44  E-value=0.0028  Score=47.95  Aligned_cols=35  Identities=9%  Similarity=0.164  Sum_probs=30.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..|..+|++.+|.+||+|.+|+..|+.+...+
T Consensus       287 ~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          287 PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            34667888999999999999999999999887653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=96.16  E-value=0.0055  Score=46.00  Aligned_cols=34  Identities=6%  Similarity=0.131  Sum_probs=29.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..|..+|++.+|.+||+|.+|+..|+.++..
T Consensus       268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            3466788899999999999999999999887654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=96.09  E-value=0.007  Score=43.84  Aligned_cols=38  Identities=26%  Similarity=0.331  Sum_probs=31.9

Q ss_pred             cHHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           24 EKEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        24 ~~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .......+..+...|++.+|.+||++.++++.|+.+..
T Consensus       269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            34455678889999999999999999999999988753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=96.04  E-value=0.006  Score=45.50  Aligned_cols=35  Identities=6%  Similarity=-0.001  Sum_probs=30.0

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..|...|++.+|.+||+|.++...|+.+.+..
T Consensus       257 ~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~  291 (299)
T 4asz_A          257 QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS  291 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            35667888999999999999999999999886543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=95.77  E-value=0.007  Score=45.29  Aligned_cols=31  Identities=13%  Similarity=0.127  Sum_probs=27.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+..|..+|.+.+|.+||+|.+|+..|+..
T Consensus       274 ~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          274 AWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            4567788999999999999999999999754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=95.72  E-value=0.011  Score=43.55  Aligned_cols=36  Identities=3%  Similarity=0.040  Sum_probs=31.4

Q ss_pred             HHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           27 EVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ....+..+...|++.+|.+||++.++++.|+.+...
T Consensus       284 ~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          284 GMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            445578899999999999999999999999988754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=95.59  E-value=0.014  Score=42.81  Aligned_cols=37  Identities=16%  Similarity=0.210  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      +....+..+..+|++.+|.+||++.++++.|+.+...
T Consensus       301 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          301 EALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            5566788899999999999999999999999988654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=95.42  E-value=0.015  Score=41.78  Aligned_cols=34  Identities=18%  Similarity=0.143  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .....+..+...|++.+|.+||++.++++.|+.+
T Consensus       267 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          267 PTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            3456688899999999999999999999999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=95.42  E-value=0.017  Score=42.10  Aligned_cols=38  Identities=18%  Similarity=0.077  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ++...+..+...|++.+|.+||++.++++.|+.+....
T Consensus       296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          296 ECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            45566888999999999999999999999999887643

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=95.31  E-value=0.015  Score=41.93  Aligned_cols=34  Identities=24%  Similarity=0.408  Sum_probs=29.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+...
T Consensus       259 ~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          259 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            3466788899999999999999999999988754

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=95.04  E-value=0.015  Score=41.17  Aligned_cols=33  Identities=18%  Similarity=0.240  Sum_probs=28.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.++..
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          233 TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            356778899999999999999999999988654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=94.86  E-value=0.022  Score=43.45  Aligned_cols=32  Identities=13%  Similarity=0.140  Sum_probs=27.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++++.|+.+..
T Consensus       316 ~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          316 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence            45567789999999999999999999988754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=94.77  E-value=0.027  Score=41.32  Aligned_cols=34  Identities=24%  Similarity=0.401  Sum_probs=29.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||++.+++..|+.++..
T Consensus       290 ~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          290 DEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            3466788899999999999999999999988754

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=94.75  E-value=0.026  Score=41.34  Aligned_cols=35  Identities=11%  Similarity=0.146  Sum_probs=30.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.++++.|+.+.....
T Consensus       279 ~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          279 EVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            46678889999999999999999999998876543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=94.72  E-value=0.025  Score=41.60  Aligned_cols=34  Identities=15%  Similarity=0.411  Sum_probs=29.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||++.+++..|+.+...
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            3567788899999999999999999999887654

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=94.70  E-value=0.03  Score=42.35  Aligned_cols=35  Identities=6%  Similarity=0.101  Sum_probs=30.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+....
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            45677889999999999999999999999886544

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=94.68  E-value=0.027  Score=42.46  Aligned_cols=33  Identities=15%  Similarity=0.285  Sum_probs=28.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+.+.
T Consensus       343 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            456777899999999999999999999988653

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=94.59  E-value=0.027  Score=40.91  Aligned_cols=34  Identities=18%  Similarity=0.345  Sum_probs=29.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++.+.|+.++...
T Consensus       251 ~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          251 SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            3567888999999999999999999999987643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=94.57  E-value=0.031  Score=41.23  Aligned_cols=35  Identities=9%  Similarity=0.123  Sum_probs=29.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+....
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            34667888999999999999999999999886543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=94.57  E-value=0.027  Score=41.63  Aligned_cols=35  Identities=11%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.+++..|+.+.....
T Consensus       247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  281 (327)
T 3lzb_A          247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence            45667889999999999999999999998875443

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=94.51  E-value=0.057  Score=38.48  Aligned_cols=35  Identities=11%  Similarity=0.036  Sum_probs=30.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.++++.|+.+.....
T Consensus       249 ~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          249 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            56778889999999999999999999998876544

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=94.47  E-value=0.029  Score=39.66  Aligned_cols=30  Identities=17%  Similarity=0.285  Sum_probs=25.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+...|++.+|.+||++.++++.|+.+
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            466788899999999999999999999754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=94.46  E-value=0.047  Score=39.04  Aligned_cols=34  Identities=9%  Similarity=-0.031  Sum_probs=29.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+....
T Consensus       252 ~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          252 EFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            5677889999999999999999999999886543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=94.43  E-value=0.035  Score=39.34  Aligned_cols=32  Identities=13%  Similarity=0.210  Sum_probs=27.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++++.|+.+..
T Consensus       235 ~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          235 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            35567789999999999999999999998764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=94.41  E-value=0.036  Score=39.02  Aligned_cols=32  Identities=13%  Similarity=0.210  Sum_probs=28.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.+++..|+.+..
T Consensus       233 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            45677889999999999999999999998764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=94.41  E-value=0.044  Score=40.05  Aligned_cols=36  Identities=8%  Similarity=0.064  Sum_probs=31.0

Q ss_pred             HHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           28 VITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        28 l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ...+..+...|++.+|.+||++.++++.|+.+....
T Consensus       285 ~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          285 VRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence            345788889999999999999999999999887543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=94.35  E-value=0.052  Score=38.76  Aligned_cols=35  Identities=11%  Similarity=0.036  Sum_probs=30.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+.....
T Consensus       249 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          249 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence            56778899999999999999999999998765433

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=94.27  E-value=0.043  Score=39.70  Aligned_cols=35  Identities=14%  Similarity=0.161  Sum_probs=30.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.+++..|+.+.....
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            45677789999999999999999999999876544

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=94.15  E-value=0.041  Score=40.61  Aligned_cols=33  Identities=12%  Similarity=0.147  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+...
T Consensus       324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            456677899999999999999999999987643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=94.09  E-value=0.046  Score=39.40  Aligned_cols=32  Identities=9%  Similarity=0.214  Sum_probs=28.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++++.|+.+..
T Consensus       280 ~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          280 EMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            46677889999999999999999999988754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=94.08  E-value=0.037  Score=38.92  Aligned_cols=31  Identities=16%  Similarity=0.260  Sum_probs=27.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+...|++.+|.+||++.++++.|+.+.
T Consensus       239 ~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          239 HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            4566778899999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=94.06  E-value=0.04  Score=39.60  Aligned_cols=32  Identities=9%  Similarity=0.234  Sum_probs=27.9

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+.
T Consensus       256 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          256 KRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            34667788999999999999999999998764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=94.04  E-value=0.045  Score=38.97  Aligned_cols=33  Identities=18%  Similarity=0.316  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+-..|++.+|.+||++.++++.|+.+...
T Consensus       242 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            455677899999999999999999999988653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=94.03  E-value=0.042  Score=40.21  Aligned_cols=33  Identities=9%  Similarity=0.156  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       272 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          272 EVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            466788899999999999999999999987543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=94.01  E-value=0.045  Score=39.33  Aligned_cols=31  Identities=0%  Similarity=0.158  Sum_probs=27.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+...|++.+|.+||++.++++.|+.+.
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            4667888999999999999999999998763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=93.91  E-value=0.068  Score=39.42  Aligned_cols=34  Identities=9%  Similarity=0.143  Sum_probs=29.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.+++..|+.+....
T Consensus       278 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          278 AIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            4567888999999999999999999999876543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=93.87  E-value=0.064  Score=39.05  Aligned_cols=34  Identities=15%  Similarity=0.265  Sum_probs=29.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++++.|+.+....
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            4556778999999999999999999999886543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=93.86  E-value=0.055  Score=38.44  Aligned_cols=33  Identities=9%  Similarity=0.097  Sum_probs=28.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++...|+.+...
T Consensus       238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence            456788899999999999999999999987654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=93.83  E-value=0.046  Score=39.05  Aligned_cols=30  Identities=20%  Similarity=0.247  Sum_probs=26.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+...|++.+|.+||++.++++.|+.+
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          258 RLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            456778899999999999999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=93.82  E-value=0.063  Score=38.65  Aligned_cols=33  Identities=15%  Similarity=0.191  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       276 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            456778899999999999999999999887653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=93.81  E-value=0.063  Score=40.45  Aligned_cols=34  Identities=21%  Similarity=0.275  Sum_probs=29.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++++.|+.+....
T Consensus       321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence            4567888999999999999999999999887543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=93.77  E-value=0.059  Score=38.67  Aligned_cols=33  Identities=12%  Similarity=0.244  Sum_probs=28.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       260 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          260 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            466778899999999999999999999987653

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=93.75  E-value=0.097  Score=38.75  Aligned_cols=36  Identities=14%  Similarity=0.159  Sum_probs=30.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      ..+..+...|++.+|.+||++.++++.|+.+.....
T Consensus       304 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          304 ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            345667789999999999999999999998876544

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=93.74  E-value=0.06  Score=38.38  Aligned_cols=33  Identities=12%  Similarity=0.289  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+...
T Consensus       242 ~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  274 (281)
T 3cc6_A          242 VLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM  274 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence            356777899999999999999999999887653

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=93.72  E-value=0.055  Score=39.55  Aligned_cols=33  Identities=15%  Similarity=0.209  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+...
T Consensus       295 ~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          295 NIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            456788899999999999999999999887543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=93.71  E-value=0.069  Score=38.31  Aligned_cols=33  Identities=9%  Similarity=0.120  Sum_probs=28.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+-..
T Consensus       248 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          248 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            466788899999999999999999999987543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=93.67  E-value=0.058  Score=39.06  Aligned_cols=34  Identities=12%  Similarity=0.135  Sum_probs=29.3

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..+...|++.+|.+||++.+++..|+.+...
T Consensus       276 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          276 DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            3566788899999999999999999999987654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=93.63  E-value=0.048  Score=39.49  Aligned_cols=34  Identities=12%  Similarity=0.119  Sum_probs=27.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++++.|+.+....
T Consensus       271 ~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          271 EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             THHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            3567888999999999999999999999886543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=93.63  E-value=0.06  Score=38.43  Aligned_cols=33  Identities=15%  Similarity=0.289  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+...
T Consensus       245 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          245 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            455677899999999999999999999987653

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=93.59  E-value=0.067  Score=38.23  Aligned_cols=34  Identities=15%  Similarity=0.256  Sum_probs=29.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.+++..|+.+....
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            4567788999999999999999999999886643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=93.58  E-value=0.069  Score=38.02  Aligned_cols=32  Identities=9%  Similarity=0.168  Sum_probs=27.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.+++..|..+..
T Consensus       249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          249 KVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            45677889999999999999999999988754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=93.33  E-value=0.072  Score=38.40  Aligned_cols=33  Identities=12%  Similarity=0.147  Sum_probs=28.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.+++..|+.+...
T Consensus       279 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          279 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            456677899999999999999999999987643

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=93.32  E-value=0.064  Score=37.97  Aligned_cols=33  Identities=15%  Similarity=0.179  Sum_probs=27.2

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      +..+...|++.+|.+||++.+++..|..+....
T Consensus       244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence            456778999999999999999999998876543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=93.28  E-value=0.058  Score=39.04  Aligned_cols=32  Identities=6%  Similarity=0.253  Sum_probs=28.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.+++..|+.+..
T Consensus       275 ~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          275 ALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            46678889999999999999999999988753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=93.28  E-value=0.065  Score=38.15  Aligned_cols=32  Identities=16%  Similarity=0.074  Sum_probs=27.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+..
T Consensus       253 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          253 DIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            45677789999999999999999999987653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=93.25  E-value=0.082  Score=37.64  Aligned_cols=33  Identities=9%  Similarity=0.195  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+...
T Consensus       240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          240 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence            466778899999999999999999999887543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=93.22  E-value=0.079  Score=38.51  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=29.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..+...|++.+|.+||++.++.+.|+.+....
T Consensus       266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            35677888999999999999999999999876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=93.09  E-value=0.081  Score=39.73  Aligned_cols=34  Identities=3%  Similarity=0.036  Sum_probs=29.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++++.|+.+....
T Consensus       314 ~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          314 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            4667888999999999999999999999876643

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=93.08  E-value=0.071  Score=41.25  Aligned_cols=33  Identities=12%  Similarity=0.128  Sum_probs=28.6

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ..+..+...|++.+|.+||++.++...|+.+..
T Consensus       412 ~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            346678889999999999999999999988754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=93.07  E-value=0.085  Score=38.71  Aligned_cols=34  Identities=18%  Similarity=0.256  Sum_probs=29.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.+++..|+.+....
T Consensus       287 ~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            4567788999999999999999999999886643

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=92.97  E-value=0.075  Score=38.89  Aligned_cols=33  Identities=15%  Similarity=0.137  Sum_probs=28.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            356677899999999999999999999887653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=92.90  E-value=0.087  Score=38.48  Aligned_cols=32  Identities=6%  Similarity=0.024  Sum_probs=28.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+..
T Consensus       304 ~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          304 ELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence            46677889999999999999999999998754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=92.85  E-value=0.06  Score=38.37  Aligned_cols=31  Identities=10%  Similarity=0.335  Sum_probs=26.9

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      +..+...|++.+|.+||++.++++.|+.+..
T Consensus       245 l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          245 LANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             THHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            5567789999999999999999999988754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=92.85  E-value=0.07  Score=38.66  Aligned_cols=34  Identities=21%  Similarity=0.317  Sum_probs=29.3

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      +..+...|++.+|.+||++.+++..|+.+.....
T Consensus       278 ~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          278 FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN  311 (337)
T ss_dssp             GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence            4567889999999999999999999998876543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=92.72  E-value=0.11  Score=37.08  Aligned_cols=35  Identities=9%  Similarity=0.079  Sum_probs=29.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+.....
T Consensus       241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  275 (287)
T 1u59_A          241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  275 (287)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            45667789999999999999999999998866544

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=92.59  E-value=0.1  Score=38.14  Aligned_cols=33  Identities=3%  Similarity=0.063  Sum_probs=28.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       273 ~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          273 PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            456788899999999999999999999887654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=92.52  E-value=0.07  Score=39.08  Aligned_cols=32  Identities=25%  Similarity=0.381  Sum_probs=27.8

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      +..+...|++.+|.+||++.+++..|+.+...
T Consensus       246 ~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          246 VYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            45677899999999999999999999887654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=92.50  E-value=0.11  Score=39.07  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=28.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            456677899999999999999999999987653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=92.42  E-value=0.2  Score=36.47  Aligned_cols=35  Identities=6%  Similarity=0.127  Sum_probs=29.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.+++..|..+.....
T Consensus       269 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          269 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence            45667789999999999999999999998765433

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=92.40  E-value=0.11  Score=40.26  Aligned_cols=33  Identities=24%  Similarity=0.351  Sum_probs=28.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..|-..|++.+|.+||++.++...|+.+...
T Consensus       414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          414 AVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            455677899999999999999999999988653

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=92.27  E-value=0.1  Score=40.92  Aligned_cols=32  Identities=9%  Similarity=0.173  Sum_probs=27.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..|...|++.+|.+||++.++++.|+.+.
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            34566778999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=92.19  E-value=0.13  Score=38.89  Aligned_cols=33  Identities=12%  Similarity=0.244  Sum_probs=28.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++++.|+.+...
T Consensus       324 ~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          324 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            456677899999999999999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=92.17  E-value=0.12  Score=37.86  Aligned_cols=32  Identities=16%  Similarity=0.271  Sum_probs=27.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.+++..|+.+..
T Consensus       303 ~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          303 EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence            45667889999999999999999999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=92.16  E-value=0.15  Score=39.48  Aligned_cols=33  Identities=12%  Similarity=0.094  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+...|++.+|.+||++.++...|+.+...
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            456778899999999999999999999887543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=91.92  E-value=0.2  Score=37.31  Aligned_cols=35  Identities=20%  Similarity=0.112  Sum_probs=29.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhhc
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASIG   64 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~~   64 (121)
                      .+..+...|++.+|.+||++.++...|+.+.....
T Consensus       298 ~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~  332 (364)
T 3op5_A          298 EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG  332 (364)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            45677889999999999999999999998766443

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=91.81  E-value=0.14  Score=37.02  Aligned_cols=31  Identities=13%  Similarity=0.154  Sum_probs=26.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+-..|++.+|.+||++.+++..|+.+.
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence            3566778999999999999999999998753

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=91.81  E-value=0.13  Score=38.01  Aligned_cols=31  Identities=16%  Similarity=0.042  Sum_probs=27.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..+-..|++.+|.+||++.++++.|+.+.
T Consensus       297 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          297 EIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            5667788999999999999999999998654

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=90.92  E-value=0.27  Score=38.73  Aligned_cols=32  Identities=9%  Similarity=-0.022  Sum_probs=28.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+..
T Consensus       247 ~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~  278 (483)
T 3sv0_A          247 EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI  278 (483)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence            57788899999999999999999999988744

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=90.55  E-value=0.44  Score=38.53  Aligned_cols=35  Identities=9%  Similarity=0.049  Sum_probs=29.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..|...|++.+|.+||++.++++.|+.+....
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            45667888999999999999999999999876543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=89.95  E-value=0.24  Score=39.27  Aligned_cols=32  Identities=9%  Similarity=0.074  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..|-..|++.+|.+||++.+++..|+.+..
T Consensus       492 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          492 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            45667789999999999999999999987654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=89.75  E-value=0.28  Score=35.79  Aligned_cols=34  Identities=9%  Similarity=0.004  Sum_probs=29.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..+...|++.+|.+||++.++.+.|+.+....
T Consensus       250 ~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          250 EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            6777888999999999999999999998876543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=89.54  E-value=0.33  Score=39.49  Aligned_cols=32  Identities=9%  Similarity=0.119  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..|...|++.+|.+||++.+++..|+.+..
T Consensus       600 ~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          600 EMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            45667789999999999999999999987654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=87.69  E-value=0.41  Score=39.11  Aligned_cols=32  Identities=16%  Similarity=0.296  Sum_probs=28.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+...|++.+|.+||++.++...|+.+..
T Consensus       620 ~l~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          620 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            45677889999999999999999999988754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=86.43  E-value=0.49  Score=33.92  Aligned_cols=25  Identities=12%  Similarity=0.149  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       260 ~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          260 PALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhcCCHHHHhc
Confidence            3567888999999999999999875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=85.73  E-value=0.68  Score=34.20  Aligned_cols=30  Identities=23%  Similarity=0.141  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           25 KEEVITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        25 ~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+.-..+..|-..|++.+|.+||++.++++
T Consensus       362 ~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          362 QEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            344556788999999999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=85.58  E-value=0.56  Score=34.47  Aligned_cols=26  Identities=19%  Similarity=0.192  Sum_probs=22.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+...|++.+|.+||++.+++..
T Consensus       249 ~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          249 DLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            45677889999999999999999763

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=85.37  E-value=0.55  Score=33.45  Aligned_cols=25  Identities=16%  Similarity=0.290  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       254 ~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          254 QAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            3556778999999999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=85.24  E-value=0.62  Score=32.73  Aligned_cols=25  Identities=20%  Similarity=0.341  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       237 ~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          237 SVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHh
Confidence            3566788999999999999999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=85.15  E-value=0.72  Score=33.29  Aligned_cols=31  Identities=16%  Similarity=0.081  Sum_probs=26.6

Q ss_pred             HHHHHhhhcCcCCCCCC-CHHHHHHHHHhhhh
Q 036602           31 IAMVAKRYLNLNGKKQP-TMKEVAFELAGIRA   61 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP-~M~eV~~~L~~i~~   61 (121)
                      +..+-..|++.+|.+|| ++.++...|+.+..
T Consensus       265 l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          265 FDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             HHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            55677899999999999 99999999987643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=84.93  E-value=0.52  Score=33.18  Aligned_cols=28  Identities=21%  Similarity=0.369  Sum_probs=23.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+..+-..|++.+|.+||++.+++..+.
T Consensus       243 ~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          243 ELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            4566778999999999999999987553

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=84.92  E-value=0.91  Score=34.30  Aligned_cols=31  Identities=10%  Similarity=0.007  Sum_probs=25.7

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      +..+-..|++.+|.+||+..|+.+.|.....
T Consensus       286 ~~~li~~~L~~dP~~R~sa~el~~~l~~~l~  316 (336)
T 4g3f_A          286 TAQAIQEGLRKEPVHRASAMELRRKVGKALQ  316 (336)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            4456678999999999999999998876544

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=84.90  E-value=0.52  Score=33.00  Aligned_cols=25  Identities=8%  Similarity=0.194  Sum_probs=21.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       255 ~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          255 EFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHhh
Confidence            4566778999999999999999865

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=84.71  E-value=0.43  Score=33.75  Aligned_cols=25  Identities=24%  Similarity=0.321  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       242 ~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          242 EFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHHh
Confidence            4566778999999999999999876

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=84.67  E-value=0.67  Score=33.56  Aligned_cols=26  Identities=15%  Similarity=0.065  Sum_probs=22.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.++++
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            34567788999999999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=84.43  E-value=0.7  Score=32.63  Aligned_cols=25  Identities=8%  Similarity=0.181  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       259 ~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          259 VEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCcccCcCHHHHhC
Confidence            3567888999999999999999875

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=84.37  E-value=0.56  Score=33.70  Aligned_cols=27  Identities=15%  Similarity=0.150  Sum_probs=23.2

Q ss_pred             HHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           28 VITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        28 l~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      -..+..+...|++.+|.+||++.++++
T Consensus       302 ~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          302 HERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHhCcCcccccCHHHHhc
Confidence            345778889999999999999999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=83.98  E-value=0.75  Score=33.09  Aligned_cols=25  Identities=20%  Similarity=0.194  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       268 ~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          268 DLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCCcccCcCHHHHhc
Confidence            3556777999999999999999876

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=83.63  E-value=0.63  Score=33.00  Aligned_cols=25  Identities=20%  Similarity=0.239  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       263 ~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          263 SFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhh
Confidence            3556778999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=83.57  E-value=0.82  Score=32.32  Aligned_cols=25  Identities=4%  Similarity=0.097  Sum_probs=21.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       254 ~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          254 EAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            3456778999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=83.50  E-value=0.77  Score=34.66  Aligned_cols=25  Identities=20%  Similarity=0.194  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       296 ~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          296 DLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhh
Confidence            4556778999999999999999976

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=83.39  E-value=0.95  Score=32.45  Aligned_cols=25  Identities=16%  Similarity=0.395  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            3556778999999999999999975

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=83.33  E-value=0.83  Score=32.21  Aligned_cols=24  Identities=25%  Similarity=0.335  Sum_probs=21.3

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-..|++.+|.+||++.++++
T Consensus       234 ~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          234 ARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhccChhhCCCHHHHhh
Confidence            456788999999999999999986

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=83.24  E-value=0.86  Score=32.07  Aligned_cols=25  Identities=16%  Similarity=0.091  Sum_probs=22.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       241 ~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          241 LAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHh
Confidence            3567888999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=83.21  E-value=0.63  Score=33.06  Aligned_cols=25  Identities=8%  Similarity=0.193  Sum_probs=21.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            4667888999999999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=83.15  E-value=0.68  Score=33.58  Aligned_cols=26  Identities=15%  Similarity=0.332  Sum_probs=22.5

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.+++.
T Consensus       308 ~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          308 VQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            35678888999999999999999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=83.12  E-value=0.54  Score=34.09  Aligned_cols=25  Identities=20%  Similarity=0.242  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       261 ~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          261 SFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHHh
Confidence            4667788999999999999999865

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=82.92  E-value=0.55  Score=34.52  Aligned_cols=26  Identities=12%  Similarity=0.069  Sum_probs=22.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..+..+...|++.+|.+||++.++++
T Consensus       330 ~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          330 ELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            34567889999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=82.90  E-value=1.1  Score=31.86  Aligned_cols=25  Identities=12%  Similarity=0.223  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       239 ~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          239 PLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            3557788999999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=82.51  E-value=0.89  Score=33.95  Aligned_cols=28  Identities=11%  Similarity=0.045  Sum_probs=23.8

Q ss_pred             HHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           27 EVITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        27 ~l~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +...+..+-..|++.+|.+||++.++++
T Consensus       345 ~~~~~~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          345 DYLKFKDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HHHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hhHHHHHHHHHhcCCChhhCCCHHHHhc
Confidence            3456778889999999999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=82.50  E-value=1.2  Score=31.97  Aligned_cols=25  Identities=12%  Similarity=0.110  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       271 ~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          271 AAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhc
Confidence            4567888999999999999999875

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=82.36  E-value=0.75  Score=33.45  Aligned_cols=25  Identities=20%  Similarity=0.318  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       269 ~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          269 ECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            3556778999999999999999865

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=82.35  E-value=1.3  Score=32.39  Aligned_cols=29  Identities=17%  Similarity=0.202  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      ..-..+..+-..|++.+|.+||++.++++
T Consensus       305 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          305 DEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             chHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            34456778889999999999999999865

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=82.12  E-value=0.73  Score=32.99  Aligned_cols=25  Identities=16%  Similarity=0.252  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhh
Confidence            3556778999999999999999876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=81.73  E-value=1  Score=32.22  Aligned_cols=25  Identities=16%  Similarity=0.260  Sum_probs=21.8

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.+++.
T Consensus       232 ~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          232 EVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc
Confidence            4566778999999999999999986

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=81.70  E-value=1  Score=32.24  Aligned_cols=25  Identities=16%  Similarity=0.038  Sum_probs=21.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       272 ~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          272 SGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCCccCCCHHHHhc
Confidence            4566778999999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=81.70  E-value=0.67  Score=32.62  Aligned_cols=25  Identities=12%  Similarity=0.065  Sum_probs=21.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.+++.
T Consensus       238 ~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          238 EAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHcccCHhhCCCHHHHhc
Confidence            4557788999999999999998875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=81.62  E-value=0.8  Score=32.27  Aligned_cols=25  Identities=20%  Similarity=0.159  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          237 EAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc
Confidence            3556778999999999999999976

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=81.58  E-value=0.97  Score=32.94  Aligned_cols=24  Identities=17%  Similarity=0.162  Sum_probs=20.7

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-..|++.+|.+||++.+++.
T Consensus       271 l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          271 LRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHccCChhhCcCHHHHhc
Confidence            456677999999999999999875

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=81.53  E-value=0.68  Score=33.10  Aligned_cols=26  Identities=23%  Similarity=0.233  Sum_probs=22.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFE   55 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~   55 (121)
                      .+..+...|++.+|.+||++.+++..
T Consensus       246 ~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          246 PLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            35677889999999999999998763

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=81.24  E-value=1.6  Score=31.34  Aligned_cols=32  Identities=19%  Similarity=0.161  Sum_probs=27.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+-.+|++.+|.+| ++.++++.|+.+...
T Consensus       235 ~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          235 QISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             HHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence            35677789999999999 999999999987653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=80.95  E-value=0.9  Score=33.86  Aligned_cols=25  Identities=4%  Similarity=0.034  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+...|++.+|.+||++.++++
T Consensus       335 ~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          335 PVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHhh
Confidence            3556778999999999999999976

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=80.81  E-value=0.97  Score=32.39  Aligned_cols=25  Identities=12%  Similarity=0.218  Sum_probs=21.5

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       301 ~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          301 QEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHccCCCCcCCCHHHHhh
Confidence            4466788999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=80.74  E-value=0.97  Score=31.61  Aligned_cols=25  Identities=12%  Similarity=0.077  Sum_probs=21.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          237 APLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHCCCCchhCCCHHHHhc
Confidence            3456788999999999999998865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=80.67  E-value=1.8  Score=32.55  Aligned_cols=36  Identities=14%  Similarity=0.037  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ..-..+..+-..|++.+|.+||++.++...+..+..
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             HHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            334456678889999999999999999999887654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=80.58  E-value=1.2  Score=31.61  Aligned_cols=25  Identities=16%  Similarity=0.118  Sum_probs=21.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       256 ~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          256 SGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhc
Confidence            3456778999999999999998864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=80.51  E-value=0.98  Score=32.18  Aligned_cols=25  Identities=12%  Similarity=0.054  Sum_probs=21.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.+++.
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          281 EAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCCccccCCHHHHhC
Confidence            4567888999999999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=80.10  E-value=1  Score=32.13  Aligned_cols=25  Identities=16%  Similarity=0.279  Sum_probs=21.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.+++.
T Consensus       268 ~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          268 DLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhc
Confidence            3566778999999999999998854

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=80.09  E-value=1  Score=32.49  Aligned_cols=25  Identities=12%  Similarity=0.089  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-..|++.+|.+||++.++++
T Consensus       295 ~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          295 EALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhc
Confidence            4566778999999999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=80.04  E-value=0.93  Score=33.04  Aligned_cols=25  Identities=24%  Similarity=0.110  Sum_probs=21.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      .+..+-.+|++.+|.+||++.++++
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          281 KGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhc
Confidence            3557788999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	121
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	96.72
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.59
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	96.55
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	96.34
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	96.32
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	96.22
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	96.12
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.08
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	96.08
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	96.04
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	95.94
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	95.81
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	95.75
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	95.65
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	95.63
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	95.39
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	95.09
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	94.87
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	94.84
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	94.77
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	94.73
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	94.58
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	94.32
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	87.65
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	84.86
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	83.09
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	82.43
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	81.24
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	80.53
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	80.01

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0006  Score=47.86  Aligned_cols=33  Identities=12%  Similarity=0.203  Sum_probs=29.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ..+..+...|++.+|.+||+|.++++.|+.+..
T Consensus       229 ~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            356678899999999999999999999998864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.001  Score=47.68  Aligned_cols=38  Identities=16%  Similarity=0.180  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           25 KEEVITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        25 ~e~l~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+....+..|..+|++.+|.+||++.+|++.|+.+...
T Consensus       261 ~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            34566788899999999999999999999999988653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.55  E-value=0.0015  Score=46.15  Aligned_cols=34  Identities=9%  Similarity=0.151  Sum_probs=29.8

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..|..+|++.+|.+||+|.+|++.|+.+...
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            4567788999999999999999999999887654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.0014  Score=47.17  Aligned_cols=33  Identities=12%  Similarity=0.244  Sum_probs=29.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..|..+|++.+|++||+|.||++.|+.+...
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            466788999999999999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.32  E-value=0.0011  Score=47.18  Aligned_cols=32  Identities=6%  Similarity=0.053  Sum_probs=28.7

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      ..+..|...|++.+|.+||+|.+|+++|+++.
T Consensus       269 ~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         269 LELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            35678899999999999999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.22  E-value=0.0023  Score=45.65  Aligned_cols=34  Identities=6%  Similarity=0.129  Sum_probs=29.1

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      ..+..|..+|++.+|.+||+|.+|++.|+.+...
T Consensus       260 ~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         260 SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            3466788999999999999999999999887543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.0023  Score=45.27  Aligned_cols=33  Identities=9%  Similarity=0.187  Sum_probs=29.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..|..+|++.+|.+||++.+++..|+.+...
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            456778899999999999999999999988764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0022  Score=45.09  Aligned_cols=32  Identities=19%  Similarity=0.327  Sum_probs=28.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+.+|..+|++.+|.+||+|.++++.|+.++.
T Consensus       228 ~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         228 AVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            45567789999999999999999999998865

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0039  Score=44.46  Aligned_cols=34  Identities=6%  Similarity=0.141  Sum_probs=29.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      .+..|..+|++.+|++||+|.+|++.|+++....
T Consensus       254 ~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~  287 (309)
T d1fvra_         254 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  287 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence            4556778999999999999999999999886543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0025  Score=44.78  Aligned_cols=32  Identities=9%  Similarity=0.089  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..|..+|++.+|.+||+|.+|++.|+.+-.
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            45678889999999999999999999987643

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0035  Score=44.55  Aligned_cols=33  Identities=12%  Similarity=0.094  Sum_probs=28.4

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRAS   62 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~   62 (121)
                      .+..+..+|++.+|++||+|.+|..+|+.....
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~  274 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  274 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence            466788999999999999999999999876543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0033  Score=44.68  Aligned_cols=32  Identities=22%  Similarity=0.320  Sum_probs=28.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+.+|..+|++.+|.+||++.+|++.|+++..
T Consensus       265 ~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         265 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            46778899999999999999999999998753

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0037  Score=44.14  Aligned_cols=32  Identities=13%  Similarity=0.140  Sum_probs=28.0

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+..+|++.+|.+||++.++++.|+.+.+
T Consensus       265 ~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         265 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            45678889999999999999999999988753

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.65  E-value=0.0045  Score=44.16  Aligned_cols=33  Identities=15%  Similarity=0.181  Sum_probs=28.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      ..+..|...|++.+|.+||+|.+++++|+++..
T Consensus       275 ~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            346678889999999999999999999987543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.63  E-value=0.0042  Score=44.33  Aligned_cols=31  Identities=13%  Similarity=0.131  Sum_probs=27.2

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      ..+.+|...|++.+|.+||+|.+|++.|+..
T Consensus       262 ~~l~~li~~cl~~~P~~RPs~~~il~~L~~~  292 (308)
T d1p4oa_         262 DMLFELMRMCWQYNPKMRPSFLEIISSIKEE  292 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            3577788899999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.39  E-value=0.0058  Score=43.23  Aligned_cols=31  Identities=10%  Similarity=0.207  Sum_probs=27.3

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIR   60 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~   60 (121)
                      .+..|...|++.+|.+||+|.++.+.|+.+.
T Consensus       244 ~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         244 KVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4667889999999999999999999988764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.09  E-value=0.0076  Score=42.00  Aligned_cols=30  Identities=10%  Similarity=0.201  Sum_probs=26.2

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..+...|++.+|.+||++.+++..|..|
T Consensus       229 ~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         229 KVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            466788899999999999999999988653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.013  Score=41.16  Aligned_cols=30  Identities=10%  Similarity=0.171  Sum_probs=26.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+..|..+|++.+|.+||+|.+|...|+..
T Consensus       238 ~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         238 EMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            455678899999999999999999988764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.01  Score=41.36  Aligned_cols=32  Identities=16%  Similarity=0.296  Sum_probs=27.7

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..|-..|++.+|.+||++.+++..|+.+..
T Consensus       237 ~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         237 TLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            45567789999999999999999999988754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.77  E-value=0.012  Score=41.94  Aligned_cols=35  Identities=14%  Similarity=0.375  Sum_probs=29.4

Q ss_pred             HHHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhhhh
Q 036602           29 ITIAMVAKRYLNLNGKKQPTMKEVAFELAGIRASI   63 (121)
Q Consensus        29 ~~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~~~   63 (121)
                      ..+..|..+|++.+|.+||++.+++..|..+....
T Consensus       240 ~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhCh
Confidence            34667888999999999999999999998876543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.73  E-value=0.012  Score=41.63  Aligned_cols=32  Identities=6%  Similarity=0.029  Sum_probs=27.6

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..|...|++.+|.+||+|.+|.+.|+.+..
T Consensus       240 ~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         240 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            45678889999999999999999999987643

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.011  Score=41.37  Aligned_cols=30  Identities=17%  Similarity=0.059  Sum_probs=26.1

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGI   59 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i   59 (121)
                      .+.+|...|++.+|.+||++.++.+.|...
T Consensus       243 ~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         243 DIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            456788999999999999999999888653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.32  E-value=0.015  Score=41.54  Aligned_cols=28  Identities=14%  Similarity=0.354  Sum_probs=24.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHH
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELA   57 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~   57 (121)
                      .+..|...|++.+|.+||++.++++.|.
T Consensus       295 ~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         295 EIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            4567788999999999999999999885

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.65  E-value=0.24  Score=33.99  Aligned_cols=30  Identities=20%  Similarity=0.236  Sum_probs=25.1

Q ss_pred             HHHHHhhhcCcCCCCCC-CHHHHHHHHHhhh
Q 036602           31 IAMVAKRYLNLNGKKQP-TMKEVAFELAGIR   60 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP-~M~eV~~~L~~i~   60 (121)
                      +..+-.+|++.+|.+|| ++.++...|.+++
T Consensus       245 l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         245 LDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            44566799999999999 8999999888764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.86  E-value=0.35  Score=33.34  Aligned_cols=32  Identities=9%  Similarity=-0.008  Sum_probs=26.9

Q ss_pred             HHHHHHhhhcCcCCCCCCCHHHHHHHHHhhhh
Q 036602           30 TIAMVAKRYLNLNGKKQPTMKEVAFELAGIRA   61 (121)
Q Consensus        30 ~v~~lAl~C~~~~~~~RP~M~eV~~~L~~i~~   61 (121)
                      .+..+-..|++.+|.+||+..++.+.|+.+..
T Consensus       247 ~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         247 EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            35667789999999999999999988887644

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.09  E-value=0.3  Score=33.69  Aligned_cols=24  Identities=8%  Similarity=0.202  Sum_probs=20.6

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-.+|++.+|++||++.|+++
T Consensus       242 ~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         242 VKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhC
Confidence            556778999999999999998864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.43  E-value=0.35  Score=33.24  Aligned_cols=24  Identities=25%  Similarity=0.468  Sum_probs=20.1

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-.+|++.+|.+||++.|+++
T Consensus       242 l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         242 LNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHh
Confidence            455667999999999999998853

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.24  E-value=0.67  Score=32.42  Aligned_cols=28  Identities=18%  Similarity=0.246  Sum_probs=23.4

Q ss_pred             HHHHHHHHHHhhhcCcCCCCCCCHHHHH
Q 036602           26 EEVITIAMVAKRYLNLNGKKQPTMKEVA   53 (121)
Q Consensus        26 e~l~~v~~lAl~C~~~~~~~RP~M~eV~   53 (121)
                      ..-..+..+-.+|+..+|.+||+++|++
T Consensus       299 ~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         299 DEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             ccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            3445677788999999999999999985

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.53  E-value=0.45  Score=32.58  Aligned_cols=24  Identities=25%  Similarity=0.335  Sum_probs=20.2

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVAF   54 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~~   54 (121)
                      +..+-.+|++.+|.+||++.|+++
T Consensus       231 ~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         231 ARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHc
Confidence            445667999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.01  E-value=0.49  Score=32.59  Aligned_cols=23  Identities=13%  Similarity=0.122  Sum_probs=19.2

Q ss_pred             HHHHHhhhcCcCCCCCCCHHHHH
Q 036602           31 IAMVAKRYLNLNGKKQPTMKEVA   53 (121)
Q Consensus        31 v~~lAl~C~~~~~~~RP~M~eV~   53 (121)
                      +..+-.+|++.+|.+||++.++.
T Consensus       236 ~~~li~~~L~~dP~~R~t~~eil  258 (271)
T d1nvra_         236 PLALLHKILVENPSARITIPDIK  258 (271)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHT
T ss_pred             HHHHHHHHcCCChhHCcCHHHHh
Confidence            34566789999999999999874