Citrus Sinensis ID: 036707

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHccEEEEEEEcccccEEEEEEEcccccccccccccccEEccccccEEEcc
Secondary Structure Prediction (SSPRO)
EEEcccHHHHHHHHHHccccEEEEEEEEccccEEEEEEEcccHHHccccHHHHHHHHcccccEEEEE
Coil and Loop (DISEMBL)
mfrikdpkvsLDFYSRVLGMSLlkrldfpemkFSLYFLgyedtasapadpvdrtvwtfgkpatielt
Flexible Loop (DISEMBL)
mfrikdpkvsldfYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTasapadpvdrtVWTFGkpatielt
Low Complexity Region (SEG)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT
Disordered region (IsUnstruct)
********VSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFG********
Disordered Region (DISOPRED)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA*********TVWTFGKPATIELT
Disordered Region (DISEMBL)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT
Disordered Region (DISPRO)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	67	2.2.26 [Sep-21-2011]
O04885	185	Lactoylglutathione lyase	N/A	no	1.0	0.362	0.865	4e-29
O49818	186	Lactoylglutathione lyase	N/A	no	1.0	0.360	0.880	6e-29
Q9ZS21	185	Lactoylglutathione lyase	yes	no	1.0	0.362	0.835	6e-28
Q42891	185	Lactoylglutathione lyase	N/A	no	1.0	0.362	0.835	9e-28
Q8H0V3	185	Lactoylglutathione lyase	yes	no	1.0	0.362	0.880	6e-24
Q6P7Q4	184	Lactoylglutathione lyase	yes	no	1.0	0.364	0.656	4e-20
Q9CPU0	184	Lactoylglutathione lyase	yes	no	1.0	0.364	0.656	5e-20
Q4R5F2	184	Lactoylglutathione lyase	N/A	no	1.0	0.364	0.582	8e-18
Q04760	184	Lactoylglutathione lyase	yes	no	1.0	0.364	0.567	7e-17
Q9HU72	176	Lactoylglutathione lyase	yes	no	1.0	0.380	0.567	2e-14

>sp|O04885|LGUL_BRAJU Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1

 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32 MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61 PATIELT 67
          PATIELT
Sbjct: 92 PATIELT 98

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica juncea (taxid: 3707)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|O49818|LGUL_CICAR Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF +
Sbjct: 33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQ 92

Query: 61 PATIELT 67
           ATIELT
Sbjct: 93 KATIELT 99

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Cicer arietinum (taxid: 3827)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9ZS21|LGUL_SOYBN Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1

 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYE+TA AP++P+D+ VWTF +
Sbjct: 32 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQ 91

Query: 61 PATIELT 67
           ATIELT
Sbjct: 92 KATIELT 98

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Active toward the hemithioacetal adducts formed by reacting methylglyoxal or phenylglyoxal with glutathione, homoglutathione or gamma-glutamylcysteine, showing no preference for homoglutathione adducts over glutathione adducts.

Glycine max (taxid: 3847)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q42891|LGUL_SOLLC Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1

 Score =  122 bits (305), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 64/67 (95%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSL+FYS+VLGMSLLKRLDFPEMKFSLYF+GYEDTASAP+DPV+RT WTF +
Sbjct: 32 MFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQ 91

Query: 61 PATIELT 67
           +T+ELT
Sbjct: 92 KSTLELT 98

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Solanum lycopersicum (taxid: 4081)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8H0V3|LGUL_ARATH Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1

 Score =  109 bits (272), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+
Sbjct: 32 MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQ 91

Query: 61 PATIELT 67
          PATIELT
Sbjct: 92 PATIELT 98

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q6P7Q4|LGUL_RAT Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSR 95

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Rattus norvegicus (taxid: 10116)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9CPU0|LGUL_MOUSE Lactoylglutathione lyase OS=Mus musculus GN=Glo1 PE=1 SV=3

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Mus musculus (taxid: 10090)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q4R5F2|LGUL_MACFA Lactoylglutathione lyase OS=Macaca fascicularis GN=GLO1 PE=2 SV=3

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 49/67 (73%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P D  ++  W   +
Sbjct: 36  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPAMKFSLYFLAYEDKNDIPKDKEEKIAWALSR 95

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Macaca fascicularis (taxid: 9541)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q04760|LGUL_HUMAN Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 36  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 95

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. Involved in the regulation of TNF-induced transcriptional activity of NF-kappa-B.

Homo sapiens (taxid: 9606)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9HU72|LGUL_PSEAE Lactoylglutathione lyase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=gloA PE=3 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 46/67 (68%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          M R+KDPK SLDFYSRVLGM LL+RLDF E +FSLYFL        P    +R  +TFG+
Sbjct: 28 MLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGR 87

Query: 61 PATIELT 67
           + +ELT
Sbjct: 88 QSVLELT 94

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
224104697	184	predicted protein [Populus trichocarpa]	1.0	0.364	0.910	8e-28
117203563	187	glyoxalase I [Arachis hypogaea]	1.0	0.358	0.865	1e-27
3334244	185	RecName: Full=Lactoylglutathione lyase;	1.0	0.362	0.865	2e-27
3334245	186	RecName: Full=Lactoylglutathione lyase;	1.0	0.360	0.880	2e-27
297843598	235	calmodulin binding protein [Arabidopsis	1.0	0.285	0.880	2e-27
449528353	201	PREDICTED: lactoylglutathione lyase-like	1.0	0.333	0.880	3e-27
449459114	185	PREDICTED: lactoylglutathione lyase-like	1.0	0.362	0.895	4e-27
255565419	234	lactoylglutathione lyase, putative [Rici	1.0	0.286	0.865	7e-27
388516521	186	unknown [Medicago truncatula]	1.0	0.360	0.865	9e-27
218196491	237	hypothetical protein OsI_19332 [Oryza sa	1.0	0.282	0.865	1e-26

>gi|224104697|ref|XP_002313532.1| predicted protein [Populus trichocarpa] gi|118481594|gb|ABK92739.1| unknown [Populus trichocarpa] gi|222849940|gb|EEE87487.1| predicted protein [Populus trichocarpa]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 61/67 (91%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED ASAP D V+RTVWTFG+
Sbjct: 32 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDHASAPGDSVERTVWTFGR 91

Query: 61 PATIELT 67
           ATIELT
Sbjct: 92 KATIELT 98

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|117203563|gb|ABJ88950.2| glyoxalase I [Arachis hypogaea]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32 MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61 PATIELT 67
          PATIELT
Sbjct: 92 PATIELT 98

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334244|sp|O04885.1|LGUL_BRAJU RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2113825|emb|CAA73691.1| Glyoxalase I [Brassica juncea]

 Score =  126 bits (316), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFR+KDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT++AP DP +RTVWTFG+
Sbjct: 32 MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGR 91

Query: 61 PATIELT 67
          PATIELT
Sbjct: 92 PATIELT 98

Source: Brassica juncea

Species: Brassica juncea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334245|sp|O49818.1|LGUL_CICAR RecName: Full=Lactoylglutathione lyase; AltName: Full=Aldoketomutase; AltName: Full=Glyoxalase I; Short=Glx I; AltName: Full=Ketone-aldehyde mutase; AltName: Full=Methylglyoxalase; AltName: Full=S-D-lactoylglutathione methylglyoxal lyase gi|2909424|emb|CAA12028.1| Glyoxalase I [Cicer arietinum]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT  AP++PVDRTVWTF +
Sbjct: 33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQ 92

Query: 61 PATIELT 67
           ATIELT
Sbjct: 93 KATIELT 99

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843598|ref|XP_002889680.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata] gi|297335522|gb|EFH65939.1| calmodulin binding protein [Arabidopsis lyrata subsp. lyrata]

 Score =  125 bits (315), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFRIKDPK SLDFYS VLGMSLLKRLDF EMKFSLYFLGYEDT +APADP +RTVWTFG+
Sbjct: 82  MFRIKDPKASLDFYSHVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPADPTERTVWTFGR 141

Query: 61  PATIELT 67
           PATIELT
Sbjct: 142 PATIELT 148

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528353|ref|XP_004171169.1| PREDICTED: lactoylglutathione lyase-like, partial [Cucumis sativus]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT SAP   VDRTVWTFG+
Sbjct: 79  MYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTSAPESSVDRTVWTFGR 138

Query: 61  PATIELT 67
            ATIELT
Sbjct: 139 KATIELT 145

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449459114|ref|XP_004147291.1| PREDICTED: lactoylglutathione lyase-like [Cucumis sativus]

 Score =  125 bits (314), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 60/67 (89%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          M+RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP   VDRTVWTFG+
Sbjct: 32 MYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPESSVDRTVWTFGR 91

Query: 61 PATIELT 67
           ATIELT
Sbjct: 92 KATIELT 98

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565419|ref|XP_002523700.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223537004|gb|EEF38640.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPK SLDFYS VLGMSLLKRLDFPEMKFSLYF+GYE+TASAP DPV+RTVWTFG+
Sbjct: 81  MYRIKDPKQSLDFYSHVLGMSLLKRLDFPEMKFSLYFMGYENTASAPTDPVERTVWTFGQ 140

Query: 61  PATIELT 67
            ATIELT
Sbjct: 141 KATIELT 147

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516521|gb|AFK46322.1| unknown [Medicago truncatula]

 Score =  124 bits (310), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 63/67 (94%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDT+ AP++ VDRTVWTF +
Sbjct: 33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTSEAPSNSVDRTVWTFAQ 92

Query: 61 PATIELT 67
           ATIELT
Sbjct: 93 KATIELT 99

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218196491|gb|EEC78918.1| hypothetical protein OsI_19332 [Oryza sativa Indica Group] gi|222630997|gb|EEE63129.1| hypothetical protein OsJ_17937 [Oryza sativa Japonica Group]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           MFR+KDPKVSLDFYSRV+GMSLLKRLDFPEMKFSLYFLGYED  SAP DPV RTVWTFG+
Sbjct: 84  MFRVKDPKVSLDFYSRVMGMSLLKRLDFPEMKFSLYFLGYEDVESAPTDPVKRTVWTFGQ 143

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 144 RATLELT 150

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
TAIR|locus:2205110	235	AT1G08110 [Arabidopsis thalian	1.0	0.285	0.880	3.9e-28
UNIPROTKB|F1N9Q2	190	GLO1 "Uncharacterized protein"	1.0	0.352	0.671	6.3e-21
RGD|2702	184	Glo1 "glyoxalase 1" [Rattus no	1.0	0.364	0.656	2.7e-20
MGI|MGI:95742	184	Glo1 "glyoxalase 1" [Mus muscu	1.0	0.364	0.656	3.5e-20
ZFIN|ZDB-GENE-030722-9	180	glo1 "glyoxalase 1" [Danio rer	1.0	0.372	0.641	3.5e-20
UNIPROTKB|Q5EI50	149	Q5EI50 "GekBS101P" [Gekko japo	1.0	0.449	0.656	5.7e-20
UNIPROTKB|Q5BL69	184	glo1 "Glyoxalase 1" [Xenopus (	1.0	0.364	0.641	9.2e-20
UNIPROTKB|I3LDM7	184	GLO1 "Uncharacterized protein"	1.0	0.364	0.626	2.5e-19
UNIPROTKB|A4FUZ1	184	GLO1 "GLO1 protein" [Bos tauru	1.0	0.364	0.626	3.1e-19
UNIPROTKB|J9NRV6	184	GLO1 "Uncharacterized protein"	1.0	0.364	0.611	8.3e-19

TAIR|locus:2205110 AT1G08110 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 59/67 (88%), Positives = 62/67 (92%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             MFRIKDPK SLDFYSRVLGMSLLKRLDF EMKFSLYFLGYEDT +AP DP +RTVWTFG+
Sbjct:    82 MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQ 141

Query:    61 PATIELT 67
             PATIELT
Sbjct:   142 PATIELT 148

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

UNIPROTKB|F1N9Q2 GLO1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 45/67 (67%), Positives = 53/67 (79%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M R+KDPK SLDFY+RVLGM+LL++ DFP MKFSLYFLGYED    P D  +RT WTF +
Sbjct:    42 MLRVKDPKKSLDFYTRVLGMTLLQKFDFPPMKFSLYFLGYEDKNDIPKDKAERTSWTFSR 101

Query:    61 PATIELT 67
              AT+ELT
Sbjct:   102 KATLELT 108

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

RGD|2702 Glo1 "glyoxalase 1" [Rattus norvegicus (taxid:10116)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  +RT W F +
Sbjct:    36 MLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSR 95

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    96 KATLELT 102

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;ISS;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA;ISO

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0009438 "methylglyoxal metabolic process" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO;ISS

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:95742 Glo1 "glyoxalase 1" [Mus musculus (taxid:10090)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct:    36 MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    96 KATLELT 102

GO:0004462 "lactoylglutathione lyase activity" evidence=ISO;IDA

GO:0005975 "carbohydrate metabolic process" evidence=ISO

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=ISO

GO:0009438 "methylglyoxal metabolic process" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-030722-9 glo1 "glyoxalase 1" [Danio rerio (taxid:7955)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 43/67 (64%), Positives = 53/67 (79%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M R+KDP  SLDFY+R+LGM+LL++ DFP M+F+LYFLGYED    PAD  +RT WTF +
Sbjct:    31 MLRVKDPVKSLDFYTRILGMTLLQKFDFPSMRFTLYFLGYEDKKEIPADVKERTAWTFSR 90

Query:    61 PATIELT 67
              ATIELT
Sbjct:    91 RATIELT 97

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

UNIPROTKB|Q5EI50 Q5EI50 "GekBS101P" [Gekko japonicus (taxid:146911)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 44/67 (65%), Positives = 52/67 (77%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+RVLGM+LL++ DFP MKFSLYFL YED    P D  ++T WTF +
Sbjct:     1 MLRIKDPKKSLDFYTRVLGMTLLQKCDFPSMKFSLYFLAYEDKNDIPKDAKEKTAWTFSR 60

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    61 KATMELT 67

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|Q5BL69 glo1 "Glyoxalase 1" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 43/67 (64%), Positives = 52/67 (77%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SL+FY+ VLGM+LL++ DFP MKFSLYF+ YED    PAD  +RT WTF +
Sbjct:    37 MLRIKDPKKSLEFYTNVLGMTLLQKFDFPSMKFSLYFMAYEDKKDIPADVNERTAWTFSR 96

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    97 KATLELT 103

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0043066 "negative regulation of apoptotic process" evidence=ISS

UNIPROTKB|I3LDM7 GLO1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F +
Sbjct:    36 MLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKSEKAAWAFSR 95

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    96 KATLELT 102

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|A4FUZ1 GLO1 "GLO1 protein" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 42/67 (62%), Positives = 51/67 (76%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YED    P D  ++  W F +
Sbjct:    36 MLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEDKNDIPKDKDEKVAWVFSR 95

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    96 KATLELT 102

GO:0043066 "negative regulation of apoptotic process" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|J9NRV6 GLO1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 41/67 (61%), Positives = 51/67 (76%)

Query:     1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             M RIKDPK SLDFY+R+LGM+LL++LDFP MKFSLYFL YE+    P D  ++  W F +
Sbjct:    36 MLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLAYEEKNDIPKDKDEKVAWAFSR 95

Query:    61 PATIELT 67
              AT+ELT
Sbjct:    96 KATLELT 102

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H0V3	LGUL_ARATH	4, ., 4, ., 1, ., 5	0.8805	1.0	0.3621	yes	no
Q9ZS21	LGUL_SOYBN	4, ., 4, ., 1, ., 5	0.8358	1.0	0.3621	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	67
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	2e-42
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	1e-41
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	9e-25
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-22
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	8e-09
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	8e-07
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	1e-06
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	2e-05
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	3e-04
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	6e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	0.004

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score =  136 bits (343), Expect = 2e-42
 Identities = 59/67 (88%), Positives = 63/67 (94%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M+RIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYF+GYEDTASAP DP +RTVWTFG+
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 61  PATIELT 67
            ATIELT
Sbjct: 140 KATIELT 146

Length = 233

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score =  133 bits (335), Expect = 1e-41
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          MFRIKDPK SLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED+ +AP DP +RTVWTFG+
Sbjct: 32 MFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGR 91

Query: 61 PATIELT 67
           ATIELT
Sbjct: 92 KATIELT 98

Length = 185

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score = 89.1 bits (221), Expect = 9e-25
 Identities = 35/67 (52%), Positives = 39/67 (58%), Gaps = 15/67 (22%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          M R+ D   SLDFY+ VLGM LL++ DFPEMKFSL FLGY D  SA              
Sbjct: 22 MLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSA-------------- 67

Query: 61 PATIELT 67
           A IELT
Sbjct: 68 -AVIELT 73

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score = 82.6 bits (205), Expect = 2e-22
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 15/67 (22%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          M R+KD + SLDFY+ VLGM LL+R DFPE KF+L FLGY D  S               
Sbjct: 5  MLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEG------------- 51

Query: 61 PATIELT 67
             +ELT
Sbjct: 52 --VLELT 56

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score = 47.7 bits (113), Expect = 8e-09
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 40
          M R+ D + S+DFY+ VLGM LL+  + PE K+SL F+GY
Sbjct: 1  MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGY 40

Length = 129

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 43.6 bits (103), Expect = 8e-07
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 42
           M R+ D   S+ FY +  GM LL++ D PE K+++  +GY  
Sbjct: 159 MLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGP 200

Length = 286

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score = 43.2 bits (102), Expect = 1e-06
 Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDT 43
          ++R+ D   ++ FY+  LGM LL++ D PE K++  FLGY  ED+
Sbjct: 29 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDS 73

Length = 286

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG 39
            R+ D + SLDFY+ VLG  L++ +D  E      F  
Sbjct: 6  ALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFFT 44

Length = 120

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 35.9 bits (82), Expect = 3e-04
 Identities = 14/65 (21%), Positives = 24/65 (36%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
             + D + S+DFY+ VLG+ L+K           Y L + D    P + +    +    
Sbjct: 7  TLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRA 66

Query: 61 PATIE 65
               
Sbjct: 67 GTGFV 71

Length = 138

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 34.9 bits (81), Expect = 6e-04
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 3  RIKDPKVSLDFYSRVLGMSLLKRLDFPEMK 32
           + D + +LDFY+RVLGM +++  +    K
Sbjct: 10 TVADIEATLDFYTRVLGMEVVRFGEEVGRK 39

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 32.5 bits (75), Expect = 0.004
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 3  RIKDPKVSLDFYSRVLGMSLLKR 25
          R+ D + SL FY  VLG+ +L+R
Sbjct: 9  RVADLERSLAFYQDVLGLEVLER 31

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
PLN02367	233	lactoylglutathione lyase	99.67
PLN03042	185	Lactoylglutathione lyase; Provisional	99.52
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.34
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.14
PRK10291	129	glyoxalase I; Provisional	99.07
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	98.92
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	98.68
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	98.56
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	98.53
PLN02300	286	lactoylglutathione lyase	98.53
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	98.52
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	98.48
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	98.42
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	98.41
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	98.4
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	98.37
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	98.35
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	98.35
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	98.31
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	98.22
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	98.21
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	98.19
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	98.18
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	98.18
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	98.14
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	98.14
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	98.13
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	98.13
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	98.09
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	98.09
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.09
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	98.06
PRK11478	129	putative lyase; Provisional	98.06
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	98.04
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	98.04
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	98.02
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.01
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	98.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.0
PRK06724	128	hypothetical protein; Provisional	97.99
PLN02300	286	lactoylglutathione lyase	97.99
PRK04101	139	fosfomycin resistance protein FosB; Provisional	97.98
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	97.98
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	97.98
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	97.98
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	97.97
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	97.97
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	97.96
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	97.96
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	97.96
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	97.94
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.92
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	97.91
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	97.91
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	97.91
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	97.9
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	97.9
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	97.88
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	97.88
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	97.87
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	97.83
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	97.82
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	97.82
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	97.82
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	97.81
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	97.8
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	97.79
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	97.79
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	97.77
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	97.76
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	97.73
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	97.71
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	97.7
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	97.67
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	97.6
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	97.56
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	97.56
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	97.54
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	97.52
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	97.51
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	97.49
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	97.49
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	97.42
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.42
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	97.14
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	96.9
COG3324	127	Predicted enzyme related to lactoylglutathione lya	96.89
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	96.88
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	96.33
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	96.13
COG3607	133	Predicted lactoylglutathione lyase [General functi	95.64
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	95.52
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	95.44
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	94.76
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	93.5
PRK10148	147	hypothetical protein; Provisional	91.37
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	87.8
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	80.87

>PLN02367 lactoylglutathione lyase

Probab=99.67  E-value=2.4e-16  Score=107.61  Aligned_cols=67  Identities=88%  Similarity=1.427  Sum_probs=58.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCCCCCCCccccceeccCCceeeeeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   67 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~~~~~~~~~~~~~~~~~~g~leLt   67 (67)
                      ||||+|+++|++||+++|||++..+.++++++|+++||++++..+.+.|.+....|.+.+.++||||
T Consensus        80 mlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt  146 (233)
T PLN02367         80 MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELT  146 (233)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEe
Confidence            7999999999999999999999999999988999999999776555666556777988888899996

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.52  E-value=4.6e-14  Score=93.03  Aligned_cols=67  Identities=87%  Similarity=1.419  Sum_probs=54.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCCCCCCCccccceeccCCceeeeeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   67 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~~~~~~~~~~~~~~~~~~g~leLt   67 (67)
                      ||+|+|+++|++||+++|||++..+...+.++++++|+++++....|.+....-.|++.+.+.|||+
T Consensus        32 ~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~   98 (185)
T PLN03042         32 MFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELT   98 (185)
T ss_pred             EEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEE
Confidence            6999999999999999999999999887777899999998654433343344556777788889984

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.34  E-value=3.1e-12  Score=80.07  Aligned_cols=41  Identities=34%  Similarity=0.736  Sum_probs=35.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCC-----------CeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-----------~~~~l~fL~~g   41 (67)
                      ||+|+|+++|++||+++|||+++++.++++           +++.++||+++
T Consensus         7 ~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~   58 (127)
T cd08358           7 VFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYG   58 (127)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecC
Confidence            699999999999999999999988887665           56677788764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.14  E-value=1e-11  Score=81.25  Aligned_cols=67  Identities=51%  Similarity=0.793  Sum_probs=60.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCCCCCCCccccceeccCCceeeeeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIELT   67 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~~~~~~~~~~~~~~~~~~g~leLt   67 (67)
                      |+||+|+.+|+.||++++||.+..+..+++..|.++||++...+..|.++..+..|...+++.+|||
T Consensus        27 ~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELt   93 (170)
T KOG2944|consen   27 MLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELT   93 (170)
T ss_pred             eeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeee
Confidence            7999999999999999999999988888888899999999877666777777779988899999997

>PRK10291 glyoxalase I; Provisional

Probab=99.07  E-value=4.6e-10  Score=67.86  Aligned_cols=42  Identities=50%  Similarity=0.893  Sum_probs=36.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      ||+|+|+++|++||+++|||++..+...+..++.++|++.++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~   42 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGP   42 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCC
Confidence            799999999999999999999988776666678889987654

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=98.92  E-value=7e-10  Score=77.09  Aligned_cols=44  Identities=39%  Similarity=0.729  Sum_probs=40.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCC-----------CeEEEEEeccCCCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----------MKFSLYFLGYEDTAS   45 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-----------~~~~l~fL~~g~~~~   45 (67)
                      ++|.|++++++||+++|||++.|..++++           ++++.+|+|+|++++
T Consensus        23 fkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEds   77 (299)
T KOG2943|consen   23 FKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDS   77 (299)
T ss_pred             EeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcc
Confidence            68999999999999999999999988888           899999999998754

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.68  E-value=4.6e-08  Score=57.37  Aligned_cols=41  Identities=24%  Similarity=0.446  Sum_probs=30.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++|||++..+...+..++..+|+..+
T Consensus         6 ~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~   46 (125)
T cd07241           6 AIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFD   46 (125)
T ss_pred             EEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecC
Confidence            48899999999999999999987655433334555666553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=98.56  E-value=2e-07  Score=54.62  Aligned_cols=42  Identities=67%  Similarity=1.121  Sum_probs=34.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++||+++..+...+++++..+|+..++
T Consensus         5 ~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~   46 (121)
T cd07233           5 MLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPD   46 (121)
T ss_pred             EEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCC
Confidence            478999999999999999999987765555457778887654

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=98.53  E-value=2.7e-07  Score=57.29  Aligned_cols=42  Identities=67%  Similarity=1.126  Sum_probs=33.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|+|.|+++|++||+++|||++..+...+.+++..+|++.++
T Consensus        22 ~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~   63 (150)
T TIGR00068        22 MLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGD   63 (150)
T ss_pred             EEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCC
Confidence            378999999999999999999987665555556677887653

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02300 lactoylglutathione lyase

Probab=98.53  E-value=2.4e-07  Score=63.37  Aligned_cols=42  Identities=40%  Similarity=0.836  Sum_probs=34.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|+|+|+++|++||+++|||++..+...+...+..+|++.++
T Consensus        29 ~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~   70 (286)
T PLN02300         29 VYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGP   70 (286)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCC
Confidence            489999999999999999999987766556667778887653

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=98.52  E-value=3.2e-07  Score=57.15  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=29.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeE-EEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~-~l~fL~~g   41 (67)
                      +|+|+|+++|++||+++|||++..+...+++.. ..+|+..+
T Consensus        11 ~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~   52 (143)
T cd07243          11 LLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCS   52 (143)
T ss_pred             EEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecC
Confidence            489999999999999999999877654333322 34566443

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=98.48  E-value=3.1e-07  Score=57.68  Aligned_cols=42  Identities=19%  Similarity=0.362  Sum_probs=32.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC-CCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~-~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...+ .++..++|+..++
T Consensus         6 ~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~   48 (153)
T cd07257           6 VLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDR   48 (153)
T ss_pred             EEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCC
Confidence            48899999999999999999997665443 2335677887643

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.42  E-value=9.6e-07  Score=52.31  Aligned_cols=30  Identities=13%  Similarity=0.261  Sum_probs=25.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM   31 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~   31 (67)
                      |.|+|+++|++||+++||+++..+...+.+
T Consensus         5 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~   34 (122)
T cd08355           5 LRYRDAAAAIDWLTDAFGFEERLVVPDDDG   34 (122)
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEEeCCCC
Confidence            789999999999999999999876543333

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=98.41  E-value=1.1e-06  Score=51.18  Aligned_cols=42  Identities=31%  Similarity=0.535  Sum_probs=31.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe--CCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~--~~~~~~~l~fL~~g~   42 (67)
                      +|+|+|+++|++||+++|||++.....  ........+++..+.
T Consensus         6 ~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~   49 (128)
T PF00903_consen    6 AIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE   49 (128)
T ss_dssp             EEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS
T ss_pred             EEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc
Confidence            478999999999999999999988765  222334555555544

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=98.40  E-value=5.5e-07  Score=57.20  Aligned_cols=25  Identities=28%  Similarity=0.514  Sum_probs=22.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++|||+++.+
T Consensus         9 ~i~V~Dle~s~~FY~~~LG~~~~~~   33 (162)
T TIGR03645         9 GISVPDLDAAVKFYTEVLGWYLIMP   33 (162)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEec
Confidence            4899999999999999999998653

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.37  E-value=1.5e-06  Score=50.80  Aligned_cols=30  Identities=23%  Similarity=0.531  Sum_probs=25.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM   31 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~   31 (67)
                      |.|+|+++|++||+++||+++..+...+.+
T Consensus         7 l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~   36 (122)
T cd07246           7 LIVRDAAAAIDFYKKAFGAEELERMPDDDG   36 (122)
T ss_pred             EEECCHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence            789999999999999999999877653333

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=98.35  E-value=1.3e-06  Score=55.18  Aligned_cols=40  Identities=18%  Similarity=0.228  Sum_probs=29.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEecc
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      +|.|+|+++|++||+++|||++......+.+.....|+..
T Consensus         8 ~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~   47 (161)
T cd07256           8 NLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHR   47 (161)
T ss_pred             EEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEec
Confidence            3889999999999999999998755433233334456643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=98.35  E-value=1.3e-06  Score=52.87  Aligned_cols=41  Identities=27%  Similarity=0.445  Sum_probs=31.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...+ +....+|+..++
T Consensus         4 ~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~   44 (131)
T cd08343           4 VLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE   44 (131)
T ss_pred             EEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC
Confidence            47899999999999999999997765433 334566776553

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=98.31  E-value=8e-07  Score=52.45  Aligned_cols=41  Identities=20%  Similarity=0.340  Sum_probs=30.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++||+++......+..++.++++..+
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~   46 (128)
T TIGR03081         6 GIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG   46 (128)
T ss_pred             EEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC
Confidence            37899999999999999999987654333334456666544

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.22  E-value=4e-06  Score=48.27  Aligned_cols=27  Identities=22%  Similarity=0.489  Sum_probs=24.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|+|.|+++|++||+++|||++..+..
T Consensus         3 ~l~v~d~~~~~~fY~~~lG~~~~~~~~   29 (119)
T cd07263           3 SLYVDDQDKALAFYTEKLGFEVREDVP   29 (119)
T ss_pred             eEEeCCHHHHHHHHHhccCeEEEEeec
Confidence            489999999999999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.21  E-value=3.8e-06  Score=52.78  Aligned_cols=42  Identities=29%  Similarity=0.513  Sum_probs=31.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC---CCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP---EMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~---~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...+   +++..++|+..++
T Consensus        14 ~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~   58 (154)
T cd07237          14 VLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG   58 (154)
T ss_pred             EEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC
Confidence            37899999999999999999987654332   1245677776643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=98.19  E-value=1.4e-06  Score=51.18  Aligned_cols=25  Identities=24%  Similarity=0.413  Sum_probs=22.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++|||++...
T Consensus         4 ~l~v~Dl~~s~~FY~~~lG~~~~~~   28 (125)
T cd08357           4 AIPVRDLEAARAFYGDVLGCKEGRS   28 (125)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeec
Confidence            4899999999999999999998654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.18  E-value=4.1e-06  Score=52.34  Aligned_cols=35  Identities=11%  Similarity=0.229  Sum_probs=28.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      |+|+|+++|++||+++|||++..+..  .   .++||...
T Consensus         5 l~V~Dle~s~~Fy~~vLG~~~~~~~~--~---~~~~l~~~   39 (141)
T cd07258           5 IGSENFEASRDSLVEDFGFRVSDLIE--D---RIVFMRCH   39 (141)
T ss_pred             EecCCHHHHHHHHHhcCCCEeeeeeC--C---EEEEEEcC
Confidence            79999999999999999999877642  1   35677643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=98.18  E-value=2.1e-06  Score=50.39  Aligned_cols=40  Identities=28%  Similarity=0.522  Sum_probs=30.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC-CCeEEEEEecc
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-EMKFSLYFLGY   40 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~-~~~~~l~fL~~   40 (67)
                      +|.|+|+++|++||+++|||++......+ .+.+..+|+..
T Consensus         5 ~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~   45 (128)
T cd07249           5 GIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGL   45 (128)
T ss_pred             EEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEc
Confidence            47899999999999999999997665432 23355666654

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=98.14  E-value=1.3e-06  Score=52.11  Aligned_cols=25  Identities=24%  Similarity=0.243  Sum_probs=22.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|+|+|+++|++||+++|||++..+
T Consensus         7 ~l~v~Dl~~s~~FY~~~LG~~~~~~   31 (120)
T cd07252           7 GVESSDLDAWRRFATDVLGLQVGDR   31 (120)
T ss_pred             EEEeCCHHHHHHHHHhccCceeccC
Confidence            4899999999999999999998654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=98.14  E-value=2.2e-06  Score=51.66  Aligned_cols=25  Identities=20%  Similarity=0.385  Sum_probs=22.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++|||++..+
T Consensus        11 ~l~v~d~~~s~~FY~~vLG~~~~~~   35 (124)
T cd08361          11 RLGTRDLAGATRFATDILGLQVAER   35 (124)
T ss_pred             EEeeCCHHHHHHHHHhccCceeccC
Confidence            3789999999999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=98.13  E-value=6.4e-06  Score=50.33  Aligned_cols=27  Identities=19%  Similarity=0.292  Sum_probs=23.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      .|.|.|+++|++||+++||+++..+..
T Consensus         5 ~i~V~D~e~s~~FY~~vLGf~~~~~~~   31 (136)
T cd08342           5 EFYVGNAKQLASWFSTKLGFEPVAYHG   31 (136)
T ss_pred             EEEeCCHHHHHHHHHHhcCCeEEEecC
Confidence            378999999999999999999987654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=98.13  E-value=2.3e-06  Score=50.79  Aligned_cols=26  Identities=27%  Similarity=0.470  Sum_probs=23.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|+|+|+++|++||+++|||++..+.
T Consensus         9 ~l~v~Dl~~s~~FY~~~lG~~~~~~~   34 (122)
T cd07265           9 QLRVLDLEEAIKHYREVLGLDEVGRD   34 (122)
T ss_pred             EEEeCCHHHHHHHHHhccCCEeeeec
Confidence            37899999999999999999987653

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=98.09  E-value=5.1e-06  Score=48.41  Aligned_cols=26  Identities=23%  Similarity=0.379  Sum_probs=23.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||++....
T Consensus         5 ~l~v~d~~~s~~FY~~~lG~~~~~~~   30 (114)
T cd07247           5 ELPTTDPERAKAFYGAVFGWTFEDMG   30 (114)
T ss_pred             EeeCCCHHHHHHHHHhccCceeeecc
Confidence            47899999999999999999997543

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.09  E-value=1.1e-05  Score=51.34  Aligned_cols=40  Identities=20%  Similarity=0.267  Sum_probs=28.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEecc
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      .|.|.|+++|++||+++|||++..+...+.+.....|+..
T Consensus        11 ~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~   50 (166)
T cd09014          11 NLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSV   50 (166)
T ss_pred             EEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeC
Confidence            3789999999999999999998766543333333345544

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.09  E-value=2.9e-06  Score=48.42  Aligned_cols=28  Identities=36%  Similarity=0.604  Sum_probs=25.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF   28 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~   28 (67)
                      +|.|+|+++|++||+++|||+++.+...
T Consensus         7 ~l~v~dl~~s~~FY~~~LG~~~~~~~~~   34 (138)
T COG0346           7 TLAVPDLEASIDFYTDVLGLRLVKDTVN   34 (138)
T ss_pred             EEeeCCHhHhHHHHHhhcCCeeeeeccc
Confidence            4789999999999999999999887653

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=98.06  E-value=3.9e-06  Score=49.80  Aligned_cols=25  Identities=32%  Similarity=0.465  Sum_probs=22.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++|||++..+
T Consensus        11 ~l~v~dl~~a~~FY~~~lG~~~~~~   35 (121)
T cd09013          11 ELLTPKPEESLWFFTDVLGLEETGR   35 (121)
T ss_pred             EEEeCCHHHHHHHHHhCcCCEEEee
Confidence            3789999999999999999999765

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>PRK11478 putative lyase; Provisional

Probab=98.06  E-value=4.8e-06  Score=49.50  Aligned_cols=25  Identities=32%  Similarity=0.479  Sum_probs=22.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|.|+++|++||+++|||++..+
T Consensus        11 ~l~v~D~~~a~~FY~~~LG~~~~~~   35 (129)
T PRK11478         11 AIIATDYAVSKAFYCDILGFTLQSE   35 (129)
T ss_pred             EEEcCCHHHHHHHHHHHhCCEeccc
Confidence            3789999999999999999998643

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=98.04  E-value=1.1e-05  Score=47.10  Aligned_cols=27  Identities=33%  Similarity=0.664  Sum_probs=24.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|.|.|+++|++||+++|||++..+..
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~~~   32 (126)
T cd08346           6 TLITRDAQETVDFYTDVLGLRLVKKTV   32 (126)
T ss_pred             EEEcCChhHhHHHHHHccCCEEeeeEe
Confidence            478999999999999999999977654

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=98.04  E-value=4.7e-06  Score=48.38  Aligned_cols=26  Identities=31%  Similarity=0.531  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|+|+|+++|++||+++|||++..+.
T Consensus         3 ~l~v~d~~~s~~Fy~~~lg~~~~~~~   28 (113)
T cd08345           3 TLIVKDLNKSIAFYRDILGAELIYSS   28 (113)
T ss_pred             eEEECCHHHHHHHHHHhcCCeeeecc
Confidence            58999999999999999999987654

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=98.02  E-value=8.7e-06  Score=48.32  Aligned_cols=25  Identities=32%  Similarity=0.462  Sum_probs=22.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||++ |||++..+.
T Consensus         7 ~l~v~Dl~~s~~FY~~-lG~~~~~~~   31 (120)
T cd08350           7 NLPSRDLDATEAFYAR-LGFSVGYRQ   31 (120)
T ss_pred             eeEcCCHHHHHHHHHH-cCCEEEecC
Confidence            4889999999999999 999997653

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.01  E-value=9.3e-06  Score=48.11  Aligned_cols=42  Identities=24%  Similarity=0.290  Sum_probs=34.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|++++++||+++||++.......+..++++.|+..++
T Consensus         4 ~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~   45 (109)
T PF13669_consen    4 GIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGD   45 (109)
T ss_dssp             EEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETT
T ss_pred             EEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCC
Confidence            378999999999999999999877766666667777877765

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=98.00  E-value=7.3e-06  Score=47.18  Aligned_cols=25  Identities=32%  Similarity=0.460  Sum_probs=22.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |+|+|+++|++||+++|||++..+.
T Consensus         4 i~v~d~~~s~~FY~~~lg~~~~~~~   28 (112)
T cd08349           4 LPVSDIERSLAFYRDVLGFEVDWEH   28 (112)
T ss_pred             EEECCHHHHHHHHHhccCeEEEEEc
Confidence            7899999999999999999997654

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.00  E-value=2e-05  Score=53.68  Aligned_cols=41  Identities=20%  Similarity=0.302  Sum_probs=30.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeE-EEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF-SLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~-~l~fL~~g   41 (67)
                      .|.|+|+++|++||+++|||++..+...+.+.. ...|+..+
T Consensus       150 ~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~  191 (303)
T TIGR03211       150 LLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVS  191 (303)
T ss_pred             eEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcC
Confidence            378999999999999999999876654444332 45566543

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>PRK06724 hypothetical protein; Provisional

Probab=97.99  E-value=1.7e-05  Score=48.88  Aligned_cols=40  Identities=20%  Similarity=0.437  Sum_probs=27.0

Q ss_pred             CeeecChHHHHHHHhhhc---CCEEEEEEeCCCCeEEEEEecc
Q 036707            1 MFRIKDPKVSLDFYSRVL---GMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vL---G~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      +|.|+|+++|++||+++|   |++.........++..+++...
T Consensus        12 ~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~~~l~l~~~   54 (128)
T PRK06724         12 EFWVANLEESISFYDMLFSIIGWRKLNEVAYSTGESEIYFKEV   54 (128)
T ss_pred             EEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCCCeeEEEecC
Confidence            389999999999999965   7776533233344445555443

>PLN02300 lactoylglutathione lyase

Probab=97.99  E-value=1.6e-05  Score=54.44  Aligned_cols=41  Identities=39%  Similarity=0.832  Sum_probs=33.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|.|+++|.+||+++||+++..+...+..++.+++++++
T Consensus       159 ~l~~~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~  199 (286)
T PLN02300        159 MLRVGDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYG  199 (286)
T ss_pred             EEEeCCHHHHHHHHHhccCCEEEeeecccccceEEEEEecC
Confidence            47899999999999999999998766555556888888754

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=97.98  E-value=1.2e-05  Score=49.23  Aligned_cols=25  Identities=36%  Similarity=0.751  Sum_probs=22.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++|||++..+
T Consensus         9 ~L~v~Dl~~s~~FY~~~lG~~~~~~   33 (139)
T PRK04101          9 CFSVSNLEKSIEFYEKVLGAKLLVK   33 (139)
T ss_pred             EEEecCHHHHHHHHHhccCCEEEee
Confidence            3789999999999999999999754

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=97.98  E-value=9.6e-06  Score=46.61  Aligned_cols=24  Identities=25%  Similarity=0.530  Sum_probs=22.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++...
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~   24 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFD   24 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEE
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEe
Confidence            689999999999999999999884

...

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.98  E-value=1.7e-05  Score=46.34  Aligned_cols=25  Identities=28%  Similarity=0.586  Sum_probs=22.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|+|.|+++|++||+++|||++..+
T Consensus         5 ~l~v~d~~~s~~Fy~~~lG~~~~~~   29 (122)
T cd08354           5 ALYVDDLEAAEAFYEDVLGLELMLK   29 (122)
T ss_pred             EEEeCCHHHHHHHHHhccCCEEeec
Confidence            4899999999999999999999764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=97.98  E-value=6e-06  Score=49.32  Aligned_cols=25  Identities=28%  Similarity=0.614  Sum_probs=22.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|+|+|+++|++||+++||+++...
T Consensus         9 ~l~v~Dl~~s~~FY~~~lG~~~~~~   33 (123)
T cd08351           9 IVPARDREASAEFYAEILGLPWAKP   33 (123)
T ss_pred             EEEcCCHHHHHHHHHHhcCCEeeec
Confidence            3789999999999999999998763

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.97  E-value=1.6e-05  Score=48.25  Aligned_cols=26  Identities=23%  Similarity=0.500  Sum_probs=22.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|.|+|+++|++||++ |||++..+..
T Consensus         8 ~i~v~Dl~~s~~FY~~-LG~~~~~~~~   33 (142)
T cd08353           8 GIVVRDLEAAIAFFLE-LGLELEGRAE   33 (142)
T ss_pred             EEEeCCHHHHHHHHHH-cCCEEccccc
Confidence            4889999999999998 9999876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.97  E-value=7.5e-06  Score=48.17  Aligned_cols=25  Identities=24%  Similarity=0.493  Sum_probs=22.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++|||++...
T Consensus         5 ~l~v~D~~~s~~FY~~~lG~~~~~~   29 (125)
T cd07264           5 IIYVEDVEKTLEFYERAFGFERRFL   29 (125)
T ss_pred             EEEEcCHHHHHHHHHHhhCCeEEee
Confidence            4789999999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=97.96  E-value=8.3e-06  Score=49.62  Aligned_cols=26  Identities=23%  Similarity=0.466  Sum_probs=23.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|.|+++|++||+++|||++..+.
T Consensus         8 ~l~v~dl~~s~~FY~~vlGl~~~~~~   33 (134)
T cd08360           8 VLFVPDVEAAEAFYRDRLGFRVSDRF   33 (134)
T ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEEe
Confidence            47899999999999999999987654

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.96  E-value=7.2e-06  Score=48.57  Aligned_cols=25  Identities=32%  Similarity=0.638  Sum_probs=22.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++||+++..+
T Consensus         7 ~l~v~D~~~a~~FY~~~lG~~~~~~   31 (120)
T cd09011           7 LLVVKDIEKSKKFYEKVLGLKVVMD   31 (120)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEeec
Confidence            3789999999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=97.96  E-value=1.7e-05  Score=49.40  Aligned_cols=25  Identities=24%  Similarity=0.466  Sum_probs=22.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|+|.|+++|++||+++|||++..+
T Consensus         9 ~i~V~Dle~s~~FY~~~LG~~~~~~   33 (144)
T cd07239           9 VLNSPDVDKTVAFYEDVLGFRVSDW   33 (144)
T ss_pred             EEECCCHHHHHHHHHhcCCCEEEEe
Confidence            3789999999999999999998654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.94  E-value=3e-05  Score=45.04  Aligned_cols=26  Identities=23%  Similarity=0.512  Sum_probs=23.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|.|+++|++||+++|||++..+.
T Consensus         8 ~l~v~d~~~a~~fy~~~lG~~~~~~~   33 (125)
T cd08352           8 AIICSDYEKSKEFYVEILGFKVIREV   33 (125)
T ss_pred             EEEcCCHHHHHHHHHHhcCCEEeeee
Confidence            47899999999999999999987653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.92  E-value=2.4e-06  Score=59.69  Aligned_cols=39  Identities=28%  Similarity=0.635  Sum_probs=31.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT   43 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~   43 (67)
                      ||+|.||++|++||++.|||++.+..    .+.+.+.|+++++
T Consensus       154 ~l~VgdL~ks~kyw~~~lgM~ileke----ek~t~~~mgYgd~  192 (299)
T KOG2943|consen  154 MLNVGDLQKSIKYWEKLLGMKILEKE----EKYTRARMGYGDE  192 (299)
T ss_pred             EEEehhHHHHHHHHHHHhCcchhhhh----hhhhhhhhccCCc
Confidence            68999999999999999999998742    2346677777764

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.91  E-value=1.1e-05  Score=47.03  Aligned_cols=24  Identities=29%  Similarity=0.693  Sum_probs=21.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      +|.|+|+++|++||+++|||++..
T Consensus         5 ~l~v~Dl~~s~~FY~~~lG~~~~~   28 (112)
T cd07238           5 NLPVADPEAAAAFYADVLGLDVVM   28 (112)
T ss_pred             eEecCCHHHHHHHHHHhcCceEEE
Confidence            478999999999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.91  E-value=1.7e-05  Score=46.72  Aligned_cols=25  Identities=44%  Similarity=0.796  Sum_probs=22.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|.|+++|++||+++|||++..+
T Consensus         7 ~l~v~d~~~~~~Fy~~~lG~~~~~~   31 (125)
T cd07255           7 TLRVADLERSLAFYQDVLGLEVLER   31 (125)
T ss_pred             EEEECCHHHHHHHHHhccCcEEEEc
Confidence            3789999999999999999999765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=97.91  E-value=1.3e-05  Score=48.81  Aligned_cols=24  Identities=13%  Similarity=0.225  Sum_probs=22.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        10 l~V~dl~~s~~FY~~~lG~~~~~~   33 (131)
T cd08364          10 LIVKDLNKTTAFLQNIFNAREVYS   33 (131)
T ss_pred             EEeCCHHHHHHHHHHHhCCeeEEe
Confidence            789999999999999999988655

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.90  E-value=1.2e-05  Score=47.09  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=22.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++||+++..+
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~   30 (119)
T cd08359           6 VIVTDDLAETADFYVRHFGFTVVFD   30 (119)
T ss_pred             EEEECCHHHHHHHHHHhhCcEEEec
Confidence            3789999999999999999998764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=97.90  E-value=1.5e-05  Score=47.45  Aligned_cols=26  Identities=31%  Similarity=0.530  Sum_probs=23.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|.|+|+++|++||+++|||++..+.
T Consensus         6 ~l~v~d~~~~~~FY~~vLG~~~~~~~   31 (121)
T cd07244           6 TLAVSDLERSVAFYVDLLGFKLHVRW   31 (121)
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEec
Confidence            37899999999999999999987654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.88  E-value=9e-06  Score=47.36  Aligned_cols=25  Identities=24%  Similarity=0.316  Sum_probs=22.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|.+||+++|||++..+
T Consensus         3 ~l~v~d~~~a~~FY~~~lg~~~~~~   27 (121)
T cd07251           3 TLGVADLARSRAFYEALLGWKPSAD   27 (121)
T ss_pred             eEeeCCHHHHHHHHHHhcCceeccc
Confidence            4789999999999999999998755

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=97.88  E-value=2.8e-05  Score=52.80  Aligned_cols=42  Identities=31%  Similarity=0.589  Sum_probs=30.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC--CCC-eEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF--PEM-KFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~--~~~-~~~l~fL~~g~   42 (67)
                      +|+|.|+++|++||+++|||++..+...  +++ .+.++|+..++
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~  191 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNE  191 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECC
Confidence            3799999999999999999998765432  222 12456776543

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=97.87  E-value=4.4e-05  Score=51.65  Aligned_cols=39  Identities=21%  Similarity=0.284  Sum_probs=30.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEecc
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      |.|.|+++|++||+++|||++..+...+.+.+...|+..
T Consensus       142 l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~  180 (294)
T TIGR02295       142 VFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHR  180 (294)
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEec
Confidence            789999999999999999999776544444555566643

The enzyme from Bacillus brevis contains manganese.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=97.83  E-value=1.9e-05  Score=47.40  Aligned_cols=26  Identities=27%  Similarity=0.566  Sum_probs=23.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|+|.|+++|++||+++|||++..+.
T Consensus         6 ~l~v~D~~~s~~FY~~~lG~~~~~~~   31 (134)
T cd08348           6 VLYVRDLEAMVRFYRDVLGFTVTDRG   31 (134)
T ss_pred             EEEecCHHHHHHHHHHhcCCEEEeec
Confidence            47899999999999999999987653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.82  E-value=1e-05  Score=47.24  Aligned_cols=25  Identities=32%  Similarity=0.664  Sum_probs=22.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++||+++...
T Consensus         3 ~l~v~d~~~a~~FY~~~lg~~~~~~   27 (114)
T cd07261           3 LLYVEDPAASAEFYSELLGREPVEL   27 (114)
T ss_pred             EEEECCHHHHHHHHHHHcCCCccCC
Confidence            4789999999999999999998653

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=97.82  E-value=2e-05  Score=49.99  Aligned_cols=26  Identities=23%  Similarity=0.510  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||++..+.
T Consensus         6 ~i~V~Dle~s~~FY~~~LG~~~~~~~   31 (157)
T cd08347           6 TLTVRDPEATAAFLTDVLGFREVGEE   31 (157)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeee
Confidence            47899999999999999999997654

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=97.82  E-value=1.7e-05  Score=46.00  Aligned_cols=26  Identities=35%  Similarity=0.687  Sum_probs=23.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|.|+|+++|++||+++|||++..+.
T Consensus         7 ~l~v~d~~~~~~FY~~~lg~~~~~~~   32 (117)
T cd07240           7 ELEVPDLERALEFYTDVLGLTVLDRD   32 (117)
T ss_pred             EEecCCHHHHHHHHHhccCcEEEeec
Confidence            37899999999999999999998654

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=97.81  E-value=7.7e-05  Score=41.45  Aligned_cols=27  Identities=30%  Similarity=0.535  Sum_probs=23.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      .|.|+|+++|++||+++||+++.....
T Consensus         3 ~i~~~d~~~~~~fy~~~lg~~~~~~~~   29 (112)
T cd06587           3 GLTVSDLEAAVAFYEEVLGFEVLFRNG   29 (112)
T ss_pred             ceeeCCHHHHHHHHHhccCCEEEEeec
Confidence            378999999999999999999877653

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=97.80  E-value=2.3e-05  Score=45.86  Aligned_cols=24  Identities=25%  Similarity=0.530  Sum_probs=21.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus         9 l~v~d~~~s~~FY~~~lG~~~~~~   32 (120)
T cd08362           9 LGVPDLAAAAAFYREVWGLSVVAE   32 (120)
T ss_pred             EecCCHHHHHHHHHhCcCcEEEEe
Confidence            789999999999999999998654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=97.79  E-value=2.2e-05  Score=46.31  Aligned_cols=24  Identities=21%  Similarity=0.373  Sum_probs=21.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|.|+++|++||++ |||++..+
T Consensus         8 ~l~v~Dl~~s~~FY~~-lGl~~~~~   31 (113)
T cd07267           8 RFEHPDLDKAERFLTD-FGLEVAAR   31 (113)
T ss_pred             EEccCCHHHHHHHHHH-cCCEEEEe
Confidence            3789999999999999 99998655

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.79  E-value=2.5e-05  Score=44.20  Aligned_cols=26  Identities=35%  Similarity=0.507  Sum_probs=22.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|.|++++++||+++|||++..+.
T Consensus         5 ~l~v~d~~~~~~FY~~~lG~~~~~~~   30 (114)
T cd07245           5 ALRVPDLEASRAFYTDVLGLEEGPRP   30 (114)
T ss_pred             EEecCCHHHHHHHHHHccCCcccCcC
Confidence            47899999999999999999987553

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.77  E-value=2.1e-05  Score=46.34  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=22.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|+|+|+++|++||+++||++...+
T Consensus         6 ~l~v~d~~~a~~FY~~~lG~~~~~~   30 (120)
T cd07254           6 ALNVDDLEASIAFYSKLFGVEPTKV   30 (120)
T ss_pred             EEEeCCHHHHHHHHHHHhCCeEecc
Confidence            3789999999999999999988654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.76  E-value=2.4e-05  Score=45.47  Aligned_cols=26  Identities=38%  Similarity=0.742  Sum_probs=23.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|.|.|+++|++||+++|||++..+.
T Consensus         8 ~l~v~d~~~s~~Fy~~~lG~~~~~~~   33 (125)
T cd07253           8 VLTVADIEATLDFYTRVLGMEVVRFG   33 (125)
T ss_pred             EEEecCHHHHHHHHHHHhCceeeccc
Confidence            37899999999999999999997654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=97.73  E-value=2.6e-05  Score=47.53  Aligned_cols=25  Identities=28%  Similarity=0.444  Sum_probs=22.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++|||++..+
T Consensus         5 ~l~V~Dl~~a~~FY~~~LG~~~~~~   29 (131)
T cd08363           5 TFSVSNLDKSISFYKHVFMEKLLVL   29 (131)
T ss_pred             EEEECCHHHHHHHHHHhhCCEEecc
Confidence            3789999999999999999998653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=97.71  E-value=3e-05  Score=45.65  Aligned_cols=24  Identities=33%  Similarity=0.574  Sum_probs=21.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|.|+++|++||+++|||++..+
T Consensus        10 l~v~d~~~~~~Fy~~~lG~~~~~~   33 (121)
T cd07266          10 LRVTDLEKSREFYVDVLGLVETEE   33 (121)
T ss_pred             EEcCCHHHHHHHHHhccCCEEecc
Confidence            789999999999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.70  E-value=3.4e-05  Score=45.86  Aligned_cols=25  Identities=28%  Similarity=0.539  Sum_probs=21.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|+|+++|++||++ |||++..+..
T Consensus         6 l~V~Dl~~s~~FY~~-lGf~~~~~~~   30 (124)
T cd09012           6 LPVKDLEKSTAFYTA-LGFEFNPQFS   30 (124)
T ss_pred             eecCCHHHHHHHHHH-CCCEEccccC
Confidence            789999999999976 9999875443

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.67  E-value=3.6e-05  Score=45.71  Aligned_cols=24  Identities=33%  Similarity=0.398  Sum_probs=21.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||++ |||++..+
T Consensus         6 ~l~v~Dl~~s~~FY~~-LGf~~~~~   29 (113)
T cd08356           6 FIPAKDFAESKQFYQA-LGFELEWE   29 (113)
T ss_pred             ccccccHHHHHHHHHH-hCCeeEec
Confidence            3789999999999987 99999765

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.60  E-value=6.9e-05  Score=44.36  Aligned_cols=26  Identities=27%  Similarity=0.472  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhc---CCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVL---GMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vL---G~~v~~~~   26 (67)
                      +|+|.|+++|++||+++|   ||++..+.
T Consensus         6 ~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~   34 (128)
T cd07242           6 ELTVRDLERSRAFYDWLLGLLGFEEVKEW   34 (128)
T ss_pred             EEEeCCHHHHHHHHHHHHhhcCCEEEEee
Confidence            478999999999999999   99997764

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=97.56  E-value=5.6e-05  Score=44.52  Aligned_cols=23  Identities=35%  Similarity=0.515  Sum_probs=19.9

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      +|.|+|+++|++||+ .|||++..
T Consensus         5 ~l~V~D~~~a~~FY~-~LGf~~~~   27 (122)
T cd07235           5 GIVVADMAKSLDFYR-RLGFDFPE   27 (122)
T ss_pred             EEEeccHHHHHHHHH-HhCceecC
Confidence            378999999999996 59999854

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=97.56  E-value=4.2e-05  Score=51.91  Aligned_cols=24  Identities=25%  Similarity=0.398  Sum_probs=21.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus         9 l~V~Dl~~s~~FY~~~LGl~~~~~   32 (286)
T TIGR03213         9 IGVSDVDAWREFATEVLGMMVASE   32 (286)
T ss_pred             EEeCCHHHHHHHHHhccCcccccC
Confidence            789999999999999999998654

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=97.54  E-value=7.7e-05  Score=43.97  Aligned_cols=26  Identities=23%  Similarity=0.391  Sum_probs=22.3

Q ss_pred             CeeecChHHHHHHHhhh---cCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRV---LGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~v---LG~~v~~~~   26 (67)
                      +|+|+|+++|++||+++   |||++..+.
T Consensus         5 ~l~v~d~~~s~~FY~~~f~~lg~~~~~~~   33 (123)
T cd07262           5 TLGVNDLERARAFYDAVLAPLGIKRVMED   33 (123)
T ss_pred             EEecCcHHHHHHHHHHHHhhcCceEEeec
Confidence            48899999999999999   699987543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=97.52  E-value=8.3e-05  Score=50.67  Aligned_cols=26  Identities=35%  Similarity=0.456  Sum_probs=23.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||++..+.
T Consensus         9 ~l~V~Dle~s~~FY~~~LG~~~~~~~   34 (303)
T TIGR03211         9 ELRVLDLEESLKHYTDVLGLEETGRD   34 (303)
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeec
Confidence            37899999999999999999987653

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=97.51  E-value=0.00011  Score=49.79  Aligned_cols=24  Identities=29%  Similarity=0.528  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        10 l~v~Dl~~s~~FY~~vLGl~~~~~   33 (294)
T TIGR02295        10 LRVTDLDKSREFYVDLLGFRETES   33 (294)
T ss_pred             EEeCCHHHHHHHHHHccCCEEEEe
Confidence            789999999999999999998765

The enzyme from Bacillus brevis contains manganese.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=97.49  E-value=0.00012  Score=51.17  Aligned_cols=38  Identities=29%  Similarity=0.451  Sum_probs=31.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTAS   45 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~~   45 (67)
                      |+|.|++++.+||+++|||++..+..      .-.|+..|+...
T Consensus       174 L~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~YHH  211 (265)
T COG2514         174 LKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDYHH  211 (265)
T ss_pred             EEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCcce
Confidence            78999999999999999999988722      236888888764

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=97.49  E-value=0.0001  Score=43.21  Aligned_cols=24  Identities=21%  Similarity=0.528  Sum_probs=20.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|.|+++|++||+ +|||++..+
T Consensus         7 ~l~v~d~~~s~~FY~-~lG~~~~~~   30 (112)
T cd08344           7 ALEVPDLEVARRFYE-AFGLDVREE   30 (112)
T ss_pred             EEecCCHHHHHHHHH-HhCCcEEee
Confidence            378999999999997 799999654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=97.42  E-value=0.00028  Score=46.16  Aligned_cols=39  Identities=21%  Similarity=0.321  Sum_probs=28.4

Q ss_pred             eeec--ChHHHHHHHhhhcCCEEEEEEeCCC--CeEEEEEecc
Q 036707            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPE--MKFSLYFLGY   40 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vLG~~v~~~~~~~~--~~~~l~fL~~   40 (67)
                      +.|.  |+++|++||+++|||++..+...++  .+....++..
T Consensus         9 i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~   51 (191)
T cd07250           9 GNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLAS   51 (191)
T ss_pred             eecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEEC
Confidence            6788  9999999999999999977665332  2334444444

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.42  E-value=0.0002  Score=45.28  Aligned_cols=34  Identities=32%  Similarity=0.724  Sum_probs=25.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEecc
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      .|||.|-+.-++||+++|||+++.+..      .+++|+.
T Consensus         5 vlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~   38 (125)
T PF14506_consen    5 VLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGD   38 (125)
T ss_dssp             EEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-
T ss_pred             eEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecC
Confidence            389999999999999999999988743      3456654

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=97.14  E-value=0.0018  Score=45.44  Aligned_cols=26  Identities=27%  Similarity=0.650  Sum_probs=23.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |+|+|++.+..||+++||+++..+..
T Consensus        16 L~vrdL~~~~~FY~~ilGL~v~~~~~   41 (265)
T COG2514          16 LNVRDLDSMTSFYQEILGLQVLEETD   41 (265)
T ss_pred             EEeccHHHHHHHHHHhhCCeeeeccC
Confidence            79999999999999999999987643

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=96.90  E-value=0.0042  Score=37.51  Aligned_cols=26  Identities=19%  Similarity=0.401  Sum_probs=22.9

Q ss_pred             eee-cChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRI-KDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V-~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.+ .|.+++++||+++||.++.....
T Consensus         5 L~~~~~~~eAi~FY~~~fg~~~~~~~~   31 (128)
T cd06588           5 LWFNGNAEEALEFYQSVFGGEITSLTR   31 (128)
T ss_pred             EeeCCCHHHHHHHHHHHhCCEeEEEEE
Confidence            677 89999999999999999987653

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=96.89  E-value=0.0022  Score=40.56  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=22.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|.|++++++||.+++|-+.....+
T Consensus        15 i~~~D~~ra~~FY~~vFgW~~~~~~~   40 (127)
T COG3324          15 LPVSDLERAKAFYEKVFGWTFEDYFD   40 (127)
T ss_pred             eecCCHHHHHHHHHHhhCceeccccc
Confidence            67999999999999999999876544

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=96.88  E-value=0.0004  Score=44.03  Aligned_cols=24  Identities=25%  Similarity=0.391  Sum_probs=22.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|.|++++.+||+++||++.-+.
T Consensus        10 ~pV~Dl~~tr~FYgevlG~~~GRs   33 (138)
T COG3565          10 IPVNDLDETRRFYGEVLGCKEGRS   33 (138)
T ss_pred             eeccccHHHHhhhhhhcccccccc
Confidence            789999999999999999998664

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=96.33  E-value=0.0032  Score=44.52  Aligned_cols=26  Identities=15%  Similarity=0.414  Sum_probs=22.8

Q ss_pred             eeec--ChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIK--DPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|.  |+++|+.||+++|||++..+..
T Consensus       164 i~V~~~dl~~~~~fY~~~lGf~~~~~~~  191 (353)
T TIGR01263       164 GNVYRGQMEPWAEFYEKIFGFREIRSFD  191 (353)
T ss_pred             cccCCccHHHHHHHHHHHhCCceeeEEE
Confidence            6677  9999999999999999977655

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.13  E-value=0.022  Score=36.29  Aligned_cols=29  Identities=31%  Similarity=0.619  Sum_probs=25.3

Q ss_pred             eeec-ChHHHHHHHhhhcCCEEEEEEeCCC
Q 036707            2 FRIK-DPKVSLDFYSRVLGMSLLKRLDFPE   30 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG~~v~~~~~~~~   30 (67)
                      |.++ |-+++++||+++||.++..+...++
T Consensus         6 l~f~gn~~~Al~fY~~vFgae~~~~~~~~d   35 (136)
T COG2764           6 LFFNGNAREALAFYKEVFGAEELKRVPFGD   35 (136)
T ss_pred             EEECCCHHHHHHHHHHHhCceEEEEEEcCc
Confidence            5677 9999999999999999988877655

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=95.64  E-value=0.0055  Score=39.10  Aligned_cols=24  Identities=29%  Similarity=0.577  Sum_probs=20.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+||++|.+||+ .||++.-.++
T Consensus         9 LPVkDL~~S~~Fy~-alGfk~Npq~   32 (133)
T COG3607           9 LPVKDLEASKAFYT-ALGFKFNPQF   32 (133)
T ss_pred             cchhhHHHHHHHHH-HhCcccCCCc
Confidence            78999999999995 6899985544

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=95.52  E-value=0.037  Score=39.09  Aligned_cols=24  Identities=21%  Similarity=0.436  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|++++++||++.|||+...+
T Consensus         8 ~~V~D~~~a~~~y~~~LGf~~~~~   31 (353)
T TIGR01263         8 FYVGDAKQAAYYYFTRFGFEKVAK   31 (353)
T ss_pred             EEeCCHHHHHHHHHHhcCCcEEEE
Confidence            789999999999999999999766

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=95.44  E-value=0.011  Score=43.03  Aligned_cols=21  Identities=24%  Similarity=0.651  Sum_probs=19.2

Q ss_pred             eeecChHHHHHHHhhhcCCEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSL   22 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v   22 (67)
                      |.|+|+++|++||+.+||+..
T Consensus       253 LpV~DL~rS~~FYt~LF~~n~  273 (357)
T PRK01037        253 LEVQDLRRAKKFYSKMFGLEC  273 (357)
T ss_pred             eeeCCHHHHHHHHHHHhCCCC
Confidence            789999999999999988874

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=94.76  E-value=0.059  Score=34.26  Aligned_cols=39  Identities=10%  Similarity=0.291  Sum_probs=19.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEecc
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY   40 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~   40 (67)
                      +.|+|+++++++|++.|||++...-..+..+..+..+-+
T Consensus         6 ~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f   44 (175)
T PF13468_consen    6 IAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPF   44 (175)
T ss_dssp             EE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-
T ss_pred             EEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEee
Confidence            679999999999999999999877666653444444333

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=93.50  E-value=0.13  Score=37.84  Aligned_cols=41  Identities=5%  Similarity=0.124  Sum_probs=28.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCC-----CeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-----~~~~l~fL~~g~   42 (67)
                      +.|.||+.++.||+++|||+.....+.+.     .+....++..++
T Consensus       186 iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~  231 (398)
T PLN02875        186 GNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNN  231 (398)
T ss_pred             echhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCC
Confidence            56789999999999999998876554321     123455555544

>PRK10148 hypothetical protein; Provisional

Probab=91.37  E-value=0.4  Score=30.25  Aligned_cols=25  Identities=20%  Similarity=0.506  Sum_probs=20.3

Q ss_pred             eeec-ChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIK-DPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.+. |-+++++||+++||-++..+.
T Consensus         7 L~f~g~a~eAi~FY~~~Fgae~~~~~   32 (147)
T PRK10148          7 LSFAGNCADAIAYYQQTLGAELLYKI   32 (147)
T ss_pred             EEeCCCHHHHHHHHHHHhCCEEEEEE
Confidence            4553 799999999999999886543

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=87.80  E-value=0.17  Score=30.95  Aligned_cols=17  Identities=29%  Similarity=0.686  Sum_probs=6.4

Q ss_pred             eeecChHHHHHHHhhhcC
Q 036707            2 FRIKDPKVSLDFYSRVLG   19 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG   19 (67)
                      |+|.| ++|..||++++|
T Consensus        11 LNV~d-~~~~~fy~~~f~   27 (101)
T PF14507_consen   11 LNVPD-AKSQSFYQSIFG   27 (101)
T ss_dssp             EEE-T--T---S--H---
T ss_pred             EeCCC-hhHHHHHHhccc
Confidence            78999 889999999886

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=80.87  E-value=2.8  Score=25.40  Aligned_cols=17  Identities=35%  Similarity=0.677  Sum_probs=13.7

Q ss_pred             cChHHHHHHHhhhcCCE
Q 036707            5 KDPKVSLDFYSRVLGMS   21 (67)
Q Consensus         5 ~Dle~Si~FY~~vLG~~   21 (67)
                      .+-+++++||.++||-.
T Consensus        11 g~a~eA~~fY~~vf~~~   27 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGS   27 (116)
T ss_dssp             S-HHHHHHHHHHHSTTE
T ss_pred             CCHHHHHHHHHHHcCCC
Confidence            36789999999999953

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	67
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		4e-21
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		5e-18
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		6e-18
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		6e-18
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-07
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		4e-05

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95
Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 39  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 98
Query: 61  PATIELT 67
            AT+ELT
Sbjct: 99  KATLELT 105

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 61  PATIELT 67
            AT+ELT
Sbjct: 95  KATLELT 101

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 61  PATIELT 67
            AT+ELT
Sbjct: 95  KATLELT 101

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 40
          M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY
Sbjct: 7  MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY 46

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 40
          M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY
Sbjct: 13 MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGY 52

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	67
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-24
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-21
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-20
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	3e-12
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	2e-09
2p25_A	126	Glyoxalase family protein; structural genomics, MC	2e-09
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-09
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	3e-08
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	3e-07
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-06
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	2e-05
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	2e-04
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	3e-04
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	3e-04
1qzv_F	154	Plant photosystem I: subunit PSAF; photosynthesis,	3e-04
3ghj_A	141	Putative integron gene cassette protein; integron	4e-04
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-04
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	5e-04
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	5e-04

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score = 88.5 bits (219), Expect = 2e-24
 Identities = 44/67 (65%), Positives = 53/67 (79%)

Query: 1   MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
           M RIKDPK SLDFY+RVLG++LL++LDFP MKFSLYFL YED    P D  ++T WTF +
Sbjct: 36  MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSR 95

Query: 61  PATIELT 67
            AT+ELT
Sbjct: 96  KATLELT 102

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score = 79.4 bits (196), Expect = 3e-21
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAP 47
          M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY    S+ 
Sbjct: 13 MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSST 59

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score = 76.6 bits (189), Expect = 3e-20
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAP 47
          M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY       
Sbjct: 7  MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEA 53

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 56.3 bits (136), Expect = 3e-12
 Identities = 9/43 (20%), Positives = 15/43 (34%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 43
             + D   S +FY   LG  +++    P+       L   D 
Sbjct: 10 ALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI 52

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 48.6 bits (116), Expect = 2e-09
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 43
             + D + +  FY  +LG  + + +  PE   S+ F+   +T
Sbjct: 10 AIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNT 52

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 48.6 bits (116), Expect = 2e-09
 Identities = 8/43 (18%), Positives = 14/43 (32%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 43
               + + + +FY   LG  +L+    PE       L     
Sbjct: 10 AINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ 52

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 48.3 bits (115), Expect = 5e-09
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 43
             +   K  L FY   L + LL   D P     + FL   ++
Sbjct: 13 GIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES 55

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 45.6 bits (108), Expect = 3e-08
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 1  MFRI--KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPV 51
          + R+   D   +L+FY  +L   +  R + P+    L  +      +   + +
Sbjct: 9  LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEAL 61

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 43.0 bits (101), Expect = 3e-07
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 42
               + +    FY    G +     +     F+ YFL +ED
Sbjct: 8  ALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED 49

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 41.4 bits (97), Expect = 2e-06
 Identities = 10/40 (25%), Positives = 16/40 (40%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 40
             ++D + S  FY  +LG+  L   + P     L   G 
Sbjct: 24 ALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGK 63

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 5/43 (11%), Positives = 16/43 (37%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT 43
           + +K+   +L  + R+  +   + +     K  + F+     
Sbjct: 12 GYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGY 54

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 4/42 (9%), Positives = 8/42 (19%), Gaps = 1/42 (2%)

Query: 3  RIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 44
                  + FY   L +  +         +     G     
Sbjct: 18 PTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHAD 58

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 35.3 bits (81), Expect = 3e-04
 Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 2/42 (4%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 42
           F ++D +        V     +        +FSL    +  
Sbjct: 9  TFIVRDLERMTRILEGVFDAREVYA--SDTEQFSLSREKFFL 48

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 8/59 (13%), Positives = 14/59 (23%), Gaps = 7/59 (11%)

Query: 3  RIKDPKVSLDFYSRVLGMSLLKR-------LDFPEMKFSLYFLGYEDTASAPADPVDRT 54
             D   +  FY  V G+ ++ +                L+       A A        
Sbjct: 15 YADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHG 73

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154

 Score = 35.3 bits (80), Expect = 3e-04
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 17/43 (39%)

Query: 23 LKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIE 65
          LK+L   +    LY    +D  SAPA  +          AT+E
Sbjct: 22 LKKL---QASLKLY---ADD--SAPALAIK---------ATME 47

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 6/38 (15%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 2  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG 39
           ++K+ + S  FY+ +LG            +++  ++ 
Sbjct: 34 VKVKNLEKSSQFYTEILGFEAGLL--DSARRWNFLWVS 69

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 7/38 (18%), Positives = 12/38 (31%), Gaps = 2/38 (5%)

Query: 5  KDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 42
          +D  +S  +Y+ +L    L R       F         
Sbjct: 14 RDLDISCRWYTEILDWKELVRGRGDTTSF--AHGVLPG 49

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 34.8 bits (80), Expect = 5e-04
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 2  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE 41
            +   + +  FY   +GM  + + +  + +   +F    
Sbjct: 18 APVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGN 57

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 34.4 bits (79), Expect = 5e-04
 Identities = 7/43 (16%), Positives = 13/43 (30%), Gaps = 2/43 (4%)

Query: 2  FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA 44
            +KD   +  F   +     +      +  FSL    +   A
Sbjct: 10 LIVKDLNKTTAFLQNIFNAEEIYS--SGDKTFSLSKEKFFLIA 50

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.17
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	98.78
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	98.73
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	98.7
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	98.7
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	98.6
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	98.6
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	98.59
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	98.57
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	98.55
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	98.54
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	98.52
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	98.52
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	98.45
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	98.43
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	98.39
2p25_A	126	Glyoxalase family protein; structural genomics, MC	98.3
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	98.26
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	98.18
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	98.18
3ghj_A	141	Putative integron gene cassette protein; integron	98.17
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	98.16
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	98.15
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	98.12
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	98.09
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	98.08
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	98.08
3huh_A	152	Virulence protein STM3117; structural genomics, ny	98.08
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	98.06
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	98.06
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	98.05
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	98.05
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	98.02
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	98.0
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	97.99
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	97.99
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	97.98
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	97.98
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	97.97
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	97.95
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	97.95
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	97.95
1nki_A	135	Probable fosfomycin resistance protein; potassium	97.94
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	97.93
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	97.92
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	97.92
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	97.91
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	97.91
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	97.88
2i7r_A	118	Conserved domain protein; structural genomics cons	97.88
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	97.87
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	97.86
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	97.86
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	97.86
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	97.85
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	97.85
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	97.81
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	97.8
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	97.78
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	97.77
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	97.74
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	97.73
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	97.71
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	97.71
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	97.67
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	97.67
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	97.65
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	97.64
1xy7_A	166	Unknown protein; structural genomics, protein stru	97.64
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	97.64
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	97.62
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	97.62
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	97.62
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	97.58
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	97.57
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	97.57
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	97.55
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	97.52
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	97.52
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	97.52
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	97.52
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	97.5
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.48
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.46
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	97.42
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	97.4
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.4
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	97.4
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	97.38
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	97.36
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	97.35
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.34
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	97.32
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	97.3
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.17
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	97.15
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	96.97
1tsj_A	139	Conserved hypothetical protein; structural genomic	96.69
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	96.64
3l20_A	172	Putative uncharacterized protein; hypothetical pro	96.33
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	96.28
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	96.14
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	95.44
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	95.32
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	93.27
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	92.32

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.17  E-value=2.6e-11  Score=75.37  Aligned_cols=66  Identities=56%  Similarity=1.061  Sum_probs=50.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCCCCCCCccccceeccCCceeeee
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGKPATIEL   66 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~~~~~~~~~~~~~~~~~~g~leL   66 (67)
                      +|.|+|+++|++||+++|||++..+...+.+++.++|++.++....+.|......|...+.+.|||
T Consensus        39 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l  104 (187)
T 3vw9_A           39 MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLEL  104 (187)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEE
Confidence            378999999999999999999998877667789999999887654455544444555555566665

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=98.78  E-value=4.5e-09  Score=65.25  Aligned_cols=41  Identities=78%  Similarity=1.372  Sum_probs=32.6

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++|||++..+...+++.+..++++.+
T Consensus        36 ~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~   76 (184)
T 2za0_A           36 MLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYE   76 (184)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESC
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEeccc
Confidence            37899999999999999999998765444445677777754

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=98.73  E-value=1.9e-08  Score=68.60  Aligned_cols=43  Identities=28%  Similarity=0.587  Sum_probs=36.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC-----------CCeEEEEEeccCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP-----------EMKFSLYFLGYEDT   43 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~-----------~~~~~l~fL~~g~~   43 (67)
                      +|+|+|+++|++||+++|||++..+...+           ++++.++|+++++.
T Consensus        32 ~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~   85 (330)
T 3zi1_A           32 VFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE   85 (330)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCT
T ss_pred             EEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCC
Confidence            48999999999999999999998877655           55788999988754

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=98.70  E-value=2.5e-08  Score=57.97  Aligned_cols=42  Identities=50%  Similarity=0.912  Sum_probs=34.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      .|.|+|+++|++||+++|||++..+...+.+.+.++++..++
T Consensus         7 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~   48 (135)
T 1f9z_A            7 MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGP   48 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSC
T ss_pred             EEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCC
Confidence            378999999999999999999987765455567777887664

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=98.70  E-value=2.3e-08  Score=60.78  Aligned_cols=30  Identities=17%  Similarity=0.244  Sum_probs=25.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE   30 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~   30 (67)
                      +|.|+|+++|++||+++|||++..+...+.
T Consensus        31 ~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~   60 (155)
T 4g6x_A           31 NVFVDDQAKAESFYTGKLGFLVKADVPVGA   60 (155)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEEeecCCC
Confidence            378999999999999999999987665433

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=98.60  E-value=2e-08  Score=57.73  Aligned_cols=42  Identities=21%  Similarity=0.460  Sum_probs=32.2

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...++.+...+|+..++
T Consensus        10 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~   51 (134)
T 3rmu_A           10 AIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGN   51 (134)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSS
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCC
Confidence            378999999999999999999976654444445666776654

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=98.60  E-value=6.6e-08  Score=55.48  Aligned_cols=41  Identities=20%  Similarity=0.250  Sum_probs=29.6

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++|||++..+...+++....+++..+
T Consensus        10 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~   50 (134)
T 3l7t_A           10 ALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG   50 (134)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC
Confidence            37899999999999999999998765543333333444433

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=98.59  E-value=2.2e-08  Score=57.66  Aligned_cols=41  Identities=20%  Similarity=0.345  Sum_probs=31.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++|||++..+...++.++..+|+..+
T Consensus         8 ~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~   48 (127)
T 3e5d_A            8 ALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE   48 (127)
T ss_dssp             EEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECS
T ss_pred             EEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcC
Confidence            37899999999999999999997765433344566666553

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=98.57  E-value=7.4e-08  Score=57.37  Aligned_cols=41  Identities=44%  Similarity=0.844  Sum_probs=32.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|+|+++|++||+++|||++..+...+++.+.++|+..++
T Consensus        14 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~   54 (144)
T 2c21_A           14 IRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP   54 (144)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSC
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCC
Confidence            78999999999999999999987665444456667777664

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=98.55  E-value=1.3e-07  Score=55.61  Aligned_cols=41  Identities=17%  Similarity=0.297  Sum_probs=32.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|+|+++|++||+++|||++..+...+..+...+++..++
T Consensus        15 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~   55 (148)
T 1jc4_A           15 YACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAA   55 (148)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSS
T ss_pred             EEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCC
Confidence            78999999999999999999987655444445677777665

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=98.54  E-value=6.5e-08  Score=59.05  Aligned_cols=42  Identities=26%  Similarity=0.360  Sum_probs=33.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...+.++..++|+..|+
T Consensus        13 ~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~   54 (161)
T 3oa4_A           13 GIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGE   54 (161)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETT
T ss_pred             EEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCC
Confidence            378999999999999999999988765444556777776654

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=98.52  E-value=1.7e-07  Score=55.16  Aligned_cols=38  Identities=21%  Similarity=0.276  Sum_probs=29.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEec
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG   39 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~   39 (67)
                      |.|+|+++|++||+++|||++..+...+++.+..+++.
T Consensus        11 l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~   48 (136)
T 2rk0_A           11 LTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP   48 (136)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc
Confidence            78999999999999999999987665433345555555

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=98.52  E-value=1.1e-07  Score=56.36  Aligned_cols=40  Identities=10%  Similarity=0.137  Sum_probs=30.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|+|+++|++||+++|||++..+... .+++..+|++.++
T Consensus        17 l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~   56 (139)
T 1twu_A           17 RPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPH   56 (139)
T ss_dssp             EECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSS
T ss_pred             eEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCC
Confidence            579999999999999999999876532 2345666776553

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=98.45  E-value=2.3e-07  Score=54.62  Aligned_cols=27  Identities=33%  Similarity=0.567  Sum_probs=24.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDF   28 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~   28 (67)
                      |.|+|+++|++||+++|||++..+...
T Consensus         8 l~v~D~~~a~~FY~~~lG~~~~~~~~~   34 (137)
T 3itw_A            8 LAYTDPDRAVDWLVRVFGFRLLLRQPA   34 (137)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEESS
T ss_pred             EEECCHHHHHHHHHHccCCEEEEEecC
Confidence            789999999999999999999877643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=98.43  E-value=1.4e-07  Score=57.41  Aligned_cols=38  Identities=21%  Similarity=0.459  Sum_probs=30.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEec
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLG   39 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~   39 (67)
                      |.|+|+++|++||+++|||++..+...++.++.+.+++
T Consensus        12 l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~   49 (144)
T 3r6a_A           12 LYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS   49 (144)
T ss_dssp             EEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec
Confidence            78999999999999999999988765555556666654

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=98.39  E-value=1.8e-07  Score=56.47  Aligned_cols=42  Identities=17%  Similarity=0.203  Sum_probs=31.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC--------------CCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------------EMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~--------------~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++..+...+              ..+..++|+..|+
T Consensus        24 ~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~   79 (159)
T 3gm5_A           24 GIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGP   79 (159)
T ss_dssp             EEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETT
T ss_pred             EEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCC
Confidence            47899999999999999999987654432              1345667776553

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=98.30  E-value=8.3e-07  Score=50.55  Aligned_cols=24  Identities=21%  Similarity=0.510  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++..+
T Consensus        11 l~v~d~~~a~~FY~~~lG~~~~~~   34 (126)
T 2p25_A           11 INASNYQATKNFYVEKLGFEVLRE   34 (126)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEee
Confidence            789999999999999999999765

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=98.26  E-value=5.4e-07  Score=52.41  Aligned_cols=41  Identities=15%  Similarity=0.114  Sum_probs=29.6

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE-eCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL-DFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~-~~~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+ +|||++..+. ..+..+..++|+..++
T Consensus        12 ~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~   53 (133)
T 3hdp_A           12 GYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGG   53 (133)
T ss_dssp             EEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETT
T ss_pred             EEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCC
Confidence            378999999999999 9999996542 2233445666666543

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=98.18  E-value=1.9e-06  Score=51.24  Aligned_cols=24  Identities=29%  Similarity=0.387  Sum_probs=22.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        11 l~v~Dl~~s~~FY~~~LG~~~~~~   34 (145)
T 2rk9_A           11 LYCFDINVSQSFFVDVLGFEVKYE   34 (145)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEECCHHHHHHHHHhccCCEEEee
Confidence            789999999999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=98.18  E-value=3.9e-06  Score=48.21  Aligned_cols=26  Identities=27%  Similarity=0.464  Sum_probs=23.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|+|+++|++||+++||+++..+..
T Consensus        19 l~v~D~~~a~~FY~~~lG~~~~~~~~   44 (133)
T 4hc5_A           19 IIVSDQEKALDFYVNTLGFEKVFDNQ   44 (133)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEE
T ss_pred             EEECCHHHHHHHHHhCcCCcEeeecc
Confidence            78999999999999999999987654

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=98.17  E-value=4.4e-06  Score=49.88  Aligned_cols=25  Identities=24%  Similarity=0.372  Sum_probs=23.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        34 l~v~Dl~~a~~FY~~~LG~~~~~~~   58 (141)
T 3ghj_A           34 VKVKNLEKSSQFYTEILGFEAGLLD   58 (141)
T ss_dssp             EEESCHHHHHHHHHHTSCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEec
Confidence            7899999999999999999998775

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=98.16  E-value=1.5e-06  Score=50.70  Aligned_cols=24  Identities=33%  Similarity=0.566  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        15 l~v~Dl~~a~~FY~~~LG~~~~~~   38 (135)
T 3rri_A           15 IPARDLDEAYDFYVTKLGCKLARR   38 (135)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             EEcCCHHHHHHHHHHhcCCEeecc
Confidence            789999999999999999999665

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=98.15  E-value=4.7e-06  Score=49.03  Aligned_cols=25  Identities=16%  Similarity=0.478  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|+|+++|++||++ |||++..+..
T Consensus        17 l~v~D~~~a~~FY~~-lG~~~~~~~~   41 (153)
T 1ss4_A           17 IVVESLDNAISFFEE-IGLNLEGRAN   41 (153)
T ss_dssp             EECSCHHHHHHHHHH-HTCEEEEEEE
T ss_pred             EEeCCHHHHHHHHHH-CCCEEEeecc
Confidence            789999999999999 9999986543

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=98.12  E-value=2e-06  Score=50.77  Aligned_cols=25  Identities=28%  Similarity=0.466  Sum_probs=22.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++||+++..+.
T Consensus        13 l~v~D~~~a~~FY~~~LG~~~~~~~   37 (134)
T 3fcd_A           13 LHIPDMQEALTLFCDTLGFELKYRH   37 (134)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEE
T ss_pred             EEECCHHHHHHHHHhccCcEEEEeC
Confidence            7899999999999999999997663

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=98.09  E-value=2.9e-06  Score=48.78  Aligned_cols=24  Identities=29%  Similarity=0.584  Sum_probs=22.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        16 l~v~D~~~a~~FY~~~lG~~~~~~   39 (133)
T 3ey7_A           16 LTVADIPTTTNFYEKVLGMKAVSF   39 (133)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             EEECCHHHHHHHHHHccCceEEEe
Confidence            789999999999999999999765

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=98.08  E-value=3.2e-06  Score=49.03  Aligned_cols=24  Identities=17%  Similarity=0.234  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++..+
T Consensus        11 l~v~D~~~a~~FY~~~LG~~~~~~   34 (122)
T 1qto_A           11 LTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEcCCHHHHHHHHHhccCcEEeeC
Confidence            789999999999999999999765

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=98.08  E-value=2.8e-06  Score=51.72  Aligned_cols=26  Identities=23%  Similarity=0.497  Sum_probs=23.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|+|+++|++||+++|||++..+..
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~~~~~   39 (160)
T 3r4q_A           14 LYADDLDAAEAFYRDVFGLEMVLKLP   39 (160)
T ss_dssp             EECSCHHHHHHHHHHHSCCEEEEEET
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEecC
Confidence            78999999999999999999987653

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=98.08  E-value=3.1e-06  Score=50.46  Aligned_cols=24  Identities=29%  Similarity=0.582  Sum_probs=22.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        29 l~v~D~~~a~~FY~~vLG~~~~~~   52 (152)
T 3huh_A           29 LTVSDISTTIRFYEEVLGFSAVTF   52 (152)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEc
Confidence            789999999999999999999775

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=98.06  E-value=3.7e-06  Score=47.62  Aligned_cols=24  Identities=13%  Similarity=0.337  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus         9 l~v~D~~~a~~FY~~~lG~~~~~~   32 (113)
T 1xqa_A            9 LTVADVVAAREFLEKYFGLTCSGT   32 (113)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             EEeCCHHHHHHHHHHhCCCEEecc
Confidence            789999999999999999999765

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=98.06  E-value=1.2e-05  Score=53.19  Aligned_cols=42  Identities=17%  Similarity=0.187  Sum_probs=33.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCC-CeEEEEEeccCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPE-MKFSLYFLGYEDT   43 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-~~~~l~fL~~g~~   43 (67)
                      |.|+|+++|++||+++|||++..+...+. +.....|+..++.
T Consensus       157 l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~  199 (309)
T 3hpy_A          157 LYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK  199 (309)
T ss_dssp             EEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC
Confidence            78999999999999999999987665433 4456778876543

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=98.05  E-value=3.5e-06  Score=50.44  Aligned_cols=24  Identities=33%  Similarity=0.591  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++...
T Consensus        33 l~v~Dl~~a~~FY~~vLG~~~~~~   56 (147)
T 3zw5_A           33 MTVKSIKDTTMFYSKILGMEVMTF   56 (147)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEE
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEec
Confidence            789999999999999999999754

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=98.05  E-value=4e-06  Score=48.78  Aligned_cols=24  Identities=21%  Similarity=0.402  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~   34 (124)
T 1xrk_A           11 LTARDVAEAVEFWTDRLGFSRVFV   34 (124)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEcCCHHHHHHHHHHccCceEEec
Confidence            789999999999999999999765

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=98.00  E-value=4.3e-06  Score=49.05  Aligned_cols=25  Identities=28%  Similarity=0.485  Sum_probs=22.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++|||++..+
T Consensus        13 ~l~v~D~~~a~~FY~~~LG~~~~~~   37 (141)
T 2qnt_A           13 IPFVRDINRSKSFYRDRLGLKILED   37 (141)
T ss_dssp             CCEESCHHHHHHHHHHTTCCCEEEE
T ss_pred             EEEECCHHHHHHHHHHhcCCEEEEE
Confidence            3789999999999999999999764

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=97.99  E-value=2.1e-06  Score=50.38  Aligned_cols=24  Identities=17%  Similarity=0.211  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        19 l~v~D~~~s~~FY~~~lG~~~~~~   42 (132)
T 3sk2_A           19 VYVSNVERSTDFYRFIFKKEPVFV   42 (132)
T ss_dssp             EECSCHHHHHHHHHHHHTCCCSEE
T ss_pred             EEECCHHHHHHHHHHHcCCeEEEc
Confidence            789999999999999999998764

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=97.99  E-value=5.2e-06  Score=56.38  Aligned_cols=25  Identities=28%  Similarity=0.478  Sum_probs=23.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |||+|++++++||+++|||++..+.
T Consensus        16 LrV~nr~~~~~FY~~vlG~kll~ee   40 (244)
T 3e0r_A           16 LKANNRKLNETFYIETLGMKALLEE   40 (244)
T ss_dssp             EEESSHHHHHHHHTTTTCCEEEEEC
T ss_pred             EEECCHHHHHHHHHhccCcEEeecc
Confidence            8999999999999999999998764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=97.98  E-value=5.8e-06  Score=48.70  Aligned_cols=25  Identities=12%  Similarity=0.109  Sum_probs=22.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        10 l~v~D~~~a~~FY~~~LG~~~~~~~   34 (139)
T 1r9c_A           10 FIVRDLERMTRILEGVFDAREVYAS   34 (139)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEG
T ss_pred             EEeCCHHHHHHHHHHhhCCEEeecC
Confidence            7899999999999999999997653

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=97.98  E-value=5.4e-06  Score=48.95  Aligned_cols=25  Identities=28%  Similarity=0.594  Sum_probs=22.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        10 l~v~D~~~a~~FY~~~LG~~~~~~~   34 (141)
T 1npb_A           10 LAVSDLQKSVTFWHELLGLTLHARW   34 (141)
T ss_dssp             EEESCHHHHHHHHHTTSCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHhccCCEEEeec
Confidence            7899999999999999999997764

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=97.97  E-value=1.2e-05  Score=48.03  Aligned_cols=23  Identities=22%  Similarity=0.336  Sum_probs=21.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      |.|+|+++|++||+++|||++..
T Consensus        27 l~v~D~~~a~~FY~~~LG~~~~~   49 (148)
T 3bt3_A           27 YFTKDMDKTVKWFEEILGWSGDI   49 (148)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE
T ss_pred             EEECCHHHHHHHHHhccCCEEEe
Confidence            78999999999999999999964

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=97.95  E-value=3.8e-06  Score=49.46  Aligned_cols=23  Identities=30%  Similarity=0.589  Sum_probs=21.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      |.|+|+++|++||+++|||++..
T Consensus        25 l~v~D~~~a~~FY~~~lG~~~~~   47 (156)
T 3kol_A           25 LNVQDMQASRYFYGTILGLHELT   47 (156)
T ss_dssp             EEESCHHHHHHHHTTTSCCEECC
T ss_pred             EEeCCHHHHHHHHHhhcCCEEEe
Confidence            78999999999999999999875

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=97.95  E-value=7.1e-06  Score=57.05  Aligned_cols=25  Identities=28%  Similarity=0.425  Sum_probs=23.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      .|.|+|+++|++||+++|||+++.+
T Consensus        22 ~l~V~DLe~s~~FY~dvLGL~~~~~   46 (365)
T 4ghg_A           22 ELVVTDLAKSRNFYVDVLGLHVSYE   46 (365)
T ss_dssp             EEEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             EEEeCCHHHHHHHHhhCCCCEEEEE
Confidence            3789999999999999999999876

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=97.95  E-value=1.2e-05  Score=54.59  Aligned_cols=38  Identities=26%  Similarity=0.544  Sum_probs=29.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      .|.|+|+++|++||+++|||++..+.....    .+|+..++
T Consensus       164 ~L~v~Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~  201 (330)
T 3zi1_A          164 TLAVSDLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYAD  201 (330)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEETTTT----EEEEESST
T ss_pred             EEECCCHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCC
Confidence            378999999999999999999988764321    35566554

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=97.94  E-value=8.2e-06  Score=47.82  Aligned_cols=25  Identities=32%  Similarity=0.582  Sum_probs=22.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++||+++..+.
T Consensus        10 l~v~D~~~a~~FY~~~lG~~~~~~~   34 (135)
T 1nki_A           10 LAVADLPASIAFYRDLLGFRLEARW   34 (135)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHhcCCEEEEcC
Confidence            7899999999999999999998654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=97.93  E-value=1.7e-05  Score=53.80  Aligned_cols=40  Identities=15%  Similarity=0.059  Sum_probs=32.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|+|+++|++||+++|||++..+.. +.+....+|+..++
T Consensus       159 l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~  198 (339)
T 3lm4_A          159 LMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNL  198 (339)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSS
T ss_pred             EEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCC
Confidence            78999999999999999999987765 45555677887665

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=97.92  E-value=2.6e-05  Score=51.35  Aligned_cols=40  Identities=18%  Similarity=0.228  Sum_probs=28.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      |.|+|+++|++||+++|||++..+.....+.....|+..+
T Consensus       156 l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~  195 (307)
T 1mpy_A          156 MYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLS  195 (307)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESS
T ss_pred             EEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcC
Confidence            7899999999999999999998765432321222465554

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=97.91  E-value=2e-05  Score=51.62  Aligned_cols=41  Identities=24%  Similarity=0.390  Sum_probs=29.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCC--CC-eEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~--~~-~~~l~fL~~g~   42 (67)
                      |.|+|+++|++||+++|||++..+...+  .+ .....|+..++
T Consensus       148 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~  191 (292)
T 1kw3_B          148 RCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNG  191 (292)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSS
T ss_pred             EecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECC
Confidence            7899999999999999999997654321  12 24556766543

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=97.91  E-value=5.6e-06  Score=47.15  Aligned_cols=24  Identities=25%  Similarity=0.535  Sum_probs=21.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++..+
T Consensus        13 l~v~d~~~a~~FY~~~lG~~~~~~   36 (119)
T 2pjs_A           13 IATPEPARAQAFYGDILGMPVAMD   36 (119)
T ss_dssp             EECSCGGGGHHHHTTTTCCCEEEE
T ss_pred             EEcCCHHHHHHHHHHhcCCEEEec
Confidence            679999999999999999998764

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=97.88  E-value=9.7e-06  Score=49.00  Aligned_cols=23  Identities=17%  Similarity=0.403  Sum_probs=21.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      |.|+|+++|++||+++|||++..
T Consensus        31 l~v~Dl~~a~~FY~~vLG~~~~~   53 (148)
T 2r6u_A           31 IPFDDGDRARAFYRDAFGWAIAE   53 (148)
T ss_dssp             EEESSHHHHHHHHHHHHCCEEEE
T ss_pred             EEeCCHHHHHHHHHHccCcEEEE
Confidence            78999999999999999999976

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=97.88  E-value=4.5e-06  Score=47.72  Aligned_cols=24  Identities=4%  Similarity=-0.114  Sum_probs=21.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++...
T Consensus        11 l~v~D~~~a~~FY~~~lG~~~~~~   34 (118)
T 2i7r_A           11 IIVSNVPQVCADLEHILDKKADYA   34 (118)
T ss_dssp             EECSCHHHHHHHHHHHHTSCCSEE
T ss_pred             EEeCCHHHHHHHHHHHhCCeeEEe
Confidence            789999999999999999998653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=97.87  E-value=7.6e-06  Score=48.29  Aligned_cols=24  Identities=21%  Similarity=0.389  Sum_probs=21.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        14 l~v~D~~~a~~FY~~~lG~~~~~~   37 (141)
T 2rbb_A           14 IFTRDIVAMSAFYQQVFGFQEIES   37 (141)
T ss_dssp             EECSCHHHHHHHHHHHHCCEECGG
T ss_pred             EEECCHHHHHHHHHHhcCCeeecc
Confidence            789999999999999999998643

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=97.86  E-value=5.5e-06  Score=50.19  Aligned_cols=24  Identities=29%  Similarity=0.605  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        12 l~v~Dl~~a~~FY~~vLG~~~~~~   35 (148)
T 3rhe_A           12 FYVKNPAKSEEFYKNLLDTQPIES   35 (148)
T ss_dssp             EEESCHHHHHHHHHHHHTCCCSEE
T ss_pred             EEeCCHHHHHHHHHHHcCCEEecc
Confidence            789999999999999999998665

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=97.86  E-value=3.8e-05  Score=51.48  Aligned_cols=40  Identities=8%  Similarity=0.020  Sum_probs=32.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|+|+++|++|| ++|||++..+...+.+...+.|+..++
T Consensus       158 l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~  197 (323)
T 1f1u_A          158 QVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ  197 (323)
T ss_dssp             EEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSS
T ss_pred             EecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCC
Confidence            7899999999999 999999987766555555677877654

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=97.86  E-value=1.9e-05  Score=51.89  Aligned_cols=42  Identities=29%  Similarity=0.533  Sum_probs=30.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC--------CC-eEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP--------EM-KFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~--------~~-~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||+++|||++......+        .+ .....|+..++
T Consensus       147 ~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~  197 (300)
T 2zyq_A          147 VLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNP  197 (300)
T ss_dssp             EEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSS
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECC
Confidence            37899999999999999999997654322        12 24566776543

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=97.85  E-value=9.6e-06  Score=46.98  Aligned_cols=24  Identities=13%  Similarity=0.245  Sum_probs=21.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        10 l~v~D~~~a~~FY~~~lG~~~~~~   33 (133)
T 2p7o_A           10 LIVKDLNKTTAFLQNIFNAEEIYS   33 (133)
T ss_dssp             EEESCHHHHHHHHHHHHCCEECC-
T ss_pred             EEcCCHHHHHHHHHHhcCCEEeee
Confidence            789999999999999999998654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=97.85  E-value=5.3e-06  Score=48.98  Aligned_cols=24  Identities=17%  Similarity=0.317  Sum_probs=21.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||++ ||+++..+
T Consensus        11 ~l~v~D~~~a~~FY~~-LG~~~~~~   34 (128)
T 3g12_A           11 TINTSHLQGMLGFYRI-IGFQFTAS   34 (128)
T ss_dssp             EEEESCHHHHHHHHHH-HTCCCEEC
T ss_pred             EEEcCCHHHHHHHHHH-CCCEEecc
Confidence            3789999999999999 99998765

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=97.81  E-value=6.1e-06  Score=49.60  Aligned_cols=25  Identities=24%  Similarity=0.562  Sum_probs=22.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        31 l~v~Dl~~a~~FY~~~LG~~~~~~~   55 (144)
T 2kjz_A           31 LYVDNPPASTQFYKALLGVDPVESS   55 (144)
T ss_dssp             EEESCHHHHHHHHHHHHTCCCSEEE
T ss_pred             EEeCCHHHHHHHHHHccCCEeccCC
Confidence            7899999999999999999987653

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=97.80  E-value=8.2e-06  Score=48.82  Aligned_cols=24  Identities=29%  Similarity=0.421  Sum_probs=22.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++..+
T Consensus        11 l~v~D~~~a~~FY~~~LG~~~~~~   34 (150)
T 3bqx_A           11 LGIGDLEASARFYGEGFGWAPVFR   34 (150)
T ss_dssp             EEESCHHHHHHHHHHTSCCCCSEE
T ss_pred             EEcCCHHHHHHHHHHhcCCEeecC
Confidence            789999999999999999998764

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=97.78  E-value=1.3e-05  Score=46.21  Aligned_cols=24  Identities=17%  Similarity=0.326  Sum_probs=21.6

Q ss_pred             eee--cChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRI--KDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V--~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|  +|+++|++||+++|||++..+
T Consensus        16 l~v~~~D~~~a~~FY~~~lG~~~~~~   41 (126)
T 2qqz_A           16 VAAPVGCEEEARAFYGETIGMEEIPK   41 (126)
T ss_dssp             EEECTTTHHHHHHHHTTTTCCEEECC
T ss_pred             EEcccccHHHHHHHHHhcCCCEEecC
Confidence            567  899999999999999999764

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=97.77  E-value=3.6e-05  Score=52.73  Aligned_cols=26  Identities=35%  Similarity=0.632  Sum_probs=23.6

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||+++.+.
T Consensus        13 ~l~v~Dl~~s~~FY~~vLGl~~v~~~   38 (335)
T 3oaj_A           13 TAIVGHPQENTDFYAGVLGLRLVKQT   38 (335)
T ss_dssp             EEEESCHHHHHHHHTTTTCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEeee
Confidence            37899999999999999999998764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=97.74  E-value=9.5e-06  Score=54.04  Aligned_cols=25  Identities=20%  Similarity=0.388  Sum_probs=22.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +|.|+|+++|++||+++|||++..+
T Consensus        31 ~L~V~Dle~s~~FY~~vLGl~~~~~   55 (252)
T 3pkv_A           31 TLYTAELDRMLAFYTNMLGAQHVHE   55 (252)
T ss_dssp             EEEESCHHHHHHHHHHHHCGGGEEE
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEc
Confidence            3789999999999999999998765

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=97.73  E-value=2.6e-05  Score=46.82  Aligned_cols=26  Identities=15%  Similarity=0.236  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHH---hhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFY---SRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY---~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||   +++|||++..+.
T Consensus        25 ~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~   53 (146)
T 3ct8_A           25 EINVDHLEESIAFWDWLLGELGYEDYQSW   53 (146)
T ss_dssp             EEEESCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHhhhhhCCCEEEEec
Confidence            37899999999999   999999997664

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=97.71  E-value=3e-05  Score=44.97  Aligned_cols=23  Identities=30%  Similarity=0.590  Sum_probs=21.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||++ ||+++..+
T Consensus         9 l~v~D~~~a~~FY~~-LG~~~~~~   31 (126)
T 1ecs_A            9 LPSRDFDSTAAFYER-LGFGIVFR   31 (126)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEE
T ss_pred             EEeCCHHHHHHHHHH-CCCEEEec
Confidence            789999999999998 99999765

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=97.71  E-value=4.7e-05  Score=49.90  Aligned_cols=40  Identities=33%  Similarity=0.635  Sum_probs=28.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeC---CCCeEEEEEeccC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYE   41 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~---~~~~~~l~fL~~g   41 (67)
                      |.|+|+++|++||+++|||++..+...   ++......|+..+
T Consensus       148 l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~  190 (297)
T 1lgt_A          148 RCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCN  190 (297)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESS
T ss_pred             EecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeC
Confidence            789999999999999999999765322   1112345676544

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=97.67  E-value=2.9e-05  Score=50.83  Aligned_cols=26  Identities=19%  Similarity=0.255  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|.|+|+++|++||+++|||++..+.
T Consensus         9 ~l~v~Dl~~a~~FY~~~lG~~~~~~~   34 (292)
T 1kw3_B            9 GFAVKDVPAWDHFLTKSVGLMAAGSA   34 (292)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEeCCHHHHHHHHHhcCCCEEeecC
Confidence            37899999999999999999998754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=97.67  E-value=3.4e-05  Score=51.04  Aligned_cols=25  Identities=28%  Similarity=0.465  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        14 l~v~Dl~~a~~FY~~vLG~~~~~~~   38 (309)
T 3hpy_A           14 VRVLNLEEGIHFYRNVLGLVETGRD   38 (309)
T ss_dssp             EEESSHHHHHHHHHHTSCCEEEEEC
T ss_pred             EEcCCHHHHHHHHHhccCCEEEEEc
Confidence            7899999999999999999998763

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=97.65  E-value=2e-05  Score=46.96  Aligned_cols=20  Identities=15%  Similarity=0.109  Sum_probs=16.7

Q ss_pred             eeecChHHHHHHHhhhcCCE
Q 036707            2 FRIKDPKVSLDFYSRVLGMS   21 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~   21 (67)
                      |.|+|+++|++||++++|+.
T Consensus        15 L~V~Dl~~s~~FY~~lg~~~   34 (149)
T 4gym_A           15 LPVADVAASQAFFGTLGFEF   34 (149)
T ss_dssp             EEESCHHHHHHHHHHTTCEE
T ss_pred             EEeCCHHHHHHHHHHhCCCc
Confidence            78999999999998854443

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=97.64  E-value=0.00011  Score=49.82  Aligned_cols=24  Identities=33%  Similarity=0.688  Sum_probs=22.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        17 l~v~Dl~~a~~FY~~vLG~~~~~~   40 (339)
T 3lm4_A           17 LFSPKPQETLDFFTKFLGMYVTHR   40 (339)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEEe
Confidence            789999999999999999999876

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=97.64  E-value=3.5e-05  Score=47.76  Aligned_cols=24  Identities=13%  Similarity=0.230  Sum_probs=20.9

Q ss_pred             eeecC--hHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKD--PKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~D--le~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|  +++|++||+++||+++...
T Consensus        30 L~v~D~~~~~A~~FY~~vfG~~~~~~   55 (166)
T 1xy7_A           30 LLVEAQKVGDAVTFYKSAFGAIESGH   55 (166)
T ss_dssp             EEECTTCHHHHHHHHHHHHCCEEC--
T ss_pred             EEECCcCHHHHHHHHHHHhCCEEEEE
Confidence            78999  9999999999999998754

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=97.64  E-value=3.4e-05  Score=51.93  Aligned_cols=26  Identities=27%  Similarity=0.413  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||++..+.
T Consensus        35 ~l~v~Dl~~a~~FY~~~LG~~~~~~~   60 (338)
T 1zsw_A           35 SMVTKNANENNHFYKNVLGLRRVKMT   60 (338)
T ss_dssp             EEEESCHHHHHHHHHTTTCCEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHhcCCEEEEee
Confidence            37899999999999999999997654

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=97.62  E-value=0.00014  Score=47.03  Aligned_cols=38  Identities=13%  Similarity=0.158  Sum_probs=27.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~   42 (67)
                      |.|.|+++|++||+++||+++..+...+ +.  ..++..++
T Consensus       189 l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~  226 (301)
T 2zw5_A          189 LPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTP  226 (301)
T ss_dssp             EEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSS
T ss_pred             EEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCC
Confidence            6789999999999999999998655432 22  33555544

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=97.62  E-value=3.8e-05  Score=50.35  Aligned_cols=26  Identities=19%  Similarity=0.225  Sum_probs=23.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +|.|+|+++|++||+++|||++..+.
T Consensus         9 ~l~v~Dl~~s~~FY~~~LG~~~~~~~   34 (297)
T 1lgt_A            9 GFAVSDVAAWRSFLTQKLGLMEAGTT   34 (297)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEcCCHHHHHHHHHHccCCEEeecC
Confidence            37899999999999999999998764

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.62  E-value=0.00014  Score=44.22  Aligned_cols=25  Identities=20%  Similarity=0.307  Sum_probs=22.3

Q ss_pred             eeec-ChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIK-DPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|. |+++|++||+++||+++....
T Consensus         9 L~v~~d~~~A~~FY~~vfG~~~~~~~   34 (149)
T 1u6l_A            9 LIFNGNCREAFSCYHQHLGGTLEAML   34 (149)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCEEEEEE
Confidence            7888 999999999999999997653

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=97.58  E-value=3.6e-05  Score=50.83  Aligned_cols=40  Identities=25%  Similarity=0.360  Sum_probs=28.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCC--CC-eEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~--~~-~~~l~fL~~g~   42 (67)
                      |.|+|+++|++|| ++|||++..+...+  .+ .....|+..++
T Consensus       152 l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~  194 (305)
T 2wl9_A          152 IREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCND  194 (305)
T ss_dssp             ECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSS
T ss_pred             EECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCC
Confidence            7899999999999 99999986542211  22 33456766543

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=97.57  E-value=4.7e-05  Score=50.34  Aligned_cols=40  Identities=23%  Similarity=0.304  Sum_probs=28.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCC--CC-eEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFP--EM-KFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~--~~-~~~l~fL~~g~   42 (67)
                      |.|+|+++|++|| ++|||++..+...+  .+ ...+.|+..++
T Consensus       155 l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~  197 (302)
T 2ehz_A          155 VRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNA  197 (302)
T ss_dssp             ECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSS
T ss_pred             EEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCC
Confidence            7899999999999 99999986543221  22 34567776553

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=97.57  E-value=5e-05  Score=50.02  Aligned_cols=25  Identities=28%  Similarity=0.506  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        13 l~v~Dl~~a~~FY~~~lG~~~~~~~   37 (307)
T 1mpy_A           13 LRVLDMSKALEHYVELLGLIEMDRD   37 (307)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHccCCEEEeec
Confidence            7899999999999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=97.55  E-value=3.9e-05  Score=50.71  Aligned_cols=24  Identities=29%  Similarity=0.598  Sum_probs=22.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        15 l~v~Dl~~a~~FY~~~LG~~~~~~   38 (302)
T 2ehz_A           15 ISVKDPDAWKSFATDMLGLQVLDE   38 (302)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEECC
T ss_pred             EEeCCHHHHHHHHHhcCCCEEEec
Confidence            789999999999999999999754

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=97.52  E-value=0.00013  Score=48.33  Aligned_cols=25  Identities=16%  Similarity=0.369  Sum_probs=22.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++||+++....
T Consensus        38 l~v~D~~~a~~FY~~vlG~~~~~~~   62 (282)
T 3oxh_A           38 LQTTDQSAAKKFYTSLFGWGYDDNP   62 (282)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEC
T ss_pred             EecCCHHHHHHHHHHhcCcEEeecC
Confidence            7899999999999999999987653

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=97.52  E-value=4.1e-05  Score=50.28  Aligned_cols=23  Identities=26%  Similarity=0.218  Sum_probs=21.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      |.|+|+++|++||+++|||++..
T Consensus        11 l~v~Dl~~a~~FY~~~lG~~~~~   33 (300)
T 2zyq_A           11 IEATDMAAWREYGLKVLGMVEGK   33 (300)
T ss_dssp             EEESCHHHHHHHHHHTSCCEECS
T ss_pred             EEeCCHHHHHHHHHHccCCEEec
Confidence            78999999999999999999875

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=97.52  E-value=6.3e-05  Score=50.63  Aligned_cols=25  Identities=8%  Similarity=0.204  Sum_probs=22.8

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus       186 l~v~Dl~~a~~FY~~~LG~~~~~~~  210 (338)
T 1zsw_A          186 LTVRRLDKMASTLTEIFGYTEVSRN  210 (338)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEECCHHHHHHHHHHhcCCEEEeec
Confidence            7899999999999999999997653

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=97.52  E-value=9.3e-05  Score=51.27  Aligned_cols=41  Identities=22%  Similarity=0.349  Sum_probs=29.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCC--eEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~--~~~l~fL~~g~   42 (67)
                      |.|.|+++|++||+++|||+++.+...+.+  ....+++..++
T Consensus        28 i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~   70 (381)
T 1t47_A           28 FAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGS   70 (381)
T ss_dssp             EECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETT
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCC
Confidence            789999999999999999999876432111  24556666543

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=97.50  E-value=0.00013  Score=49.62  Aligned_cols=41  Identities=12%  Similarity=0.220  Sum_probs=29.6

Q ss_pred             Ceeec--ChHHHHHHHhhhcCCEEEEEEe--CCCCeEEEEEeccC
Q 036707            1 MFRIK--DPKVSLDFYSRVLGMSLLKRLD--FPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~--Dle~Si~FY~~vLG~~v~~~~~--~~~~~~~l~fL~~g   41 (67)
                      +|.|+  |+++|++||+++|||++..+..  .+.......|+..+
T Consensus       163 ~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~  207 (357)
T 2r5v_A          163 AICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSA  207 (357)
T ss_dssp             EEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECT
T ss_pred             EEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECC
Confidence            37899  9999999999999999975432  22333455666654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=97.48  E-value=0.00012  Score=51.92  Aligned_cols=26  Identities=27%  Similarity=0.288  Sum_probs=23.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|.|+++|++||+++|||+++.+..
T Consensus        31 i~V~Dle~a~~FY~~~LGf~~v~~~~   56 (424)
T 1sqd_A           31 FWCGDATNVARRFSWGLGMRFSAKSD   56 (424)
T ss_dssp             EECSCHHHHHHHHHHHHTCEEEEEES
T ss_pred             EEECCHHHHHHHHHHcCCCEEEEEEc
Confidence            78999999999999999999987754

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=97.46  E-value=0.00018  Score=51.07  Aligned_cols=41  Identities=7%  Similarity=0.120  Sum_probs=29.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCC-----CeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-----~~~~l~fL~~g   41 (67)
                      +|+|.||++|++||+++|||++..+...++     .++...++..+
T Consensus       207 ~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~  252 (424)
T 1sqd_A          207 VGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASN  252 (424)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECT
T ss_pred             EEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcC
Confidence            478999999999999999999987764322     23455566543

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=97.42  E-value=5.1e-05  Score=44.49  Aligned_cols=23  Identities=30%  Similarity=0.605  Sum_probs=20.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||++ |||++..+
T Consensus        10 l~v~D~~~a~~FY~~-LG~~~~~~   32 (138)
T 2a4x_A           10 VVVEDMAKSLEFYRK-LGVEIPAE   32 (138)
T ss_dssp             EEESCHHHHHHHHHT-TTCCCCGG
T ss_pred             EEECCHHHHHHHHHH-cCCcEEec
Confidence            789999999999998 99998653

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=97.40  E-value=0.00015  Score=49.23  Aligned_cols=26  Identities=4%  Similarity=0.033  Sum_probs=23.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|.|+++|++||+++|||+++.+..
T Consensus        11 ~~v~D~~~a~~fy~~~LGf~~~~~~~   36 (357)
T 2r5v_A           11 MYVENLEVAAFSWVDKYAFAVAGTSR   36 (357)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EEECCHHHHHHHHHHcCCCeEEEEEc
Confidence            78999999999999999999987654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=97.40  E-value=0.00027  Score=50.10  Aligned_cols=41  Identities=5%  Similarity=0.144  Sum_probs=29.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCC-----CeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPE-----MKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~-----~~~~l~fL~~g   41 (67)
                      +|+|.|+++|++||+++|||++..+...++     .+....++..+
T Consensus       204 ~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~  249 (418)
T 1sp8_A          204 VGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANN  249 (418)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECS
T ss_pred             EEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcC
Confidence            478999999999999999999987764322     13455666544

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=97.40  E-value=7.2e-05  Score=49.39  Aligned_cols=23  Identities=13%  Similarity=0.418  Sum_probs=21.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~   24 (67)
                      |.|+|+++|++||+++|||++..
T Consensus        12 l~v~Dl~~a~~FY~~~LG~~~~~   34 (305)
T 2wl9_A           12 LSVSNLDAWRDYAAGIMGMQVVD   34 (305)
T ss_dssp             EECSCHHHHHHHHTTTTCCEEEC
T ss_pred             EEeCCHHHHHHHHHhccCCEEee
Confidence            78999999999999999999975

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=97.38  E-value=0.00013  Score=48.90  Aligned_cols=24  Identities=29%  Similarity=0.520  Sum_probs=22.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        23 l~v~Dl~~a~~FY~~vlG~~~~~~   46 (323)
T 1f1u_A           23 IVVTDLAKSREFYVDVLGLHVTEE   46 (323)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEE
T ss_pred             EEeCCHHHHHHHHHhCCCCEEeee
Confidence            789999999999999999999765

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=97.36  E-value=0.00016  Score=48.31  Aligned_cols=24  Identities=25%  Similarity=0.506  Sum_probs=22.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        14 l~v~Dl~~a~~FY~~vlG~~~~~~   37 (310)
T 3b59_A           14 YGVKDFDAEKAFYADVWGLEPVGE   37 (310)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EecCCHHHHHHHHHhCcCCEEeee
Confidence            789999999999999999999765

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=97.35  E-value=0.00018  Score=47.70  Aligned_cols=24  Identities=25%  Similarity=0.553  Sum_probs=22.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++...
T Consensus       170 l~v~D~~~a~~FY~~vlG~~~~~~  193 (282)
T 3oxh_A          170 LLTDKPDLALAFYEAVVGLTHSSM  193 (282)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEC
T ss_pred             EEcCCHHHHHHHHHHHhCCeeeec
Confidence            789999999999999999998754

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=97.34  E-value=0.00019  Score=50.85  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=30.3

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCC--eEEEEEeccCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYED   42 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~--~~~l~fL~~g~   42 (67)
                      |.|.|+++|++||+++|||+++.+...+.|  +..++++..|+
T Consensus        37 i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~   79 (418)
T 1sp8_A           37 LWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS   79 (418)
T ss_dssp             EECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT
T ss_pred             EEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC
Confidence            789999999999999999999877542221  34556665543

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=97.32  E-value=0.00017  Score=48.17  Aligned_cols=35  Identities=20%  Similarity=0.431  Sum_probs=27.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      |.|+|+++|++||+++|||++..+..  .   ...|+..+
T Consensus       147 l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~  181 (310)
T 3b59_A          147 LHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCN  181 (310)
T ss_dssp             EEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESS
T ss_pred             EecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecC
Confidence            78999999999999999999976542  2   23566554

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=97.30  E-value=0.00017  Score=49.29  Aligned_cols=25  Identities=12%  Similarity=0.373  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |+|+|+++|++||+++|||++..+.
T Consensus       159 L~v~Dle~t~~FY~~vLG~~~~~~~  183 (335)
T 3oaj_A          159 LLSEQPDKTADLLENIMGLERVGKE  183 (335)
T ss_dssp             EECSSHHHHHHHHHHTSCCEEEEEE
T ss_pred             EEECCHHHHHHHHHHHhCCEEeecc
Confidence            7899999999999999999998763

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=97.17  E-value=0.00042  Score=47.38  Aligned_cols=27  Identities=11%  Similarity=0.245  Sum_probs=23.7

Q ss_pred             Ceeec--ChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIK--DPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~--Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|.|.  |+++|++||+++|||++.....
T Consensus       163 ~l~V~~~dl~~a~~FY~~vLGf~~~~~~~  191 (357)
T 1cjx_A          163 THNVYRGRMVYWANFYEKLFNFREARYFD  191 (357)
T ss_dssp             CEECCTTHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EEeechhhHHHHHHHHHHhhCCceeeEEE
Confidence            47899  9999999999999999977654

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=97.15  E-value=0.0011  Score=39.38  Aligned_cols=23  Identities=13%  Similarity=0.517  Sum_probs=20.8

Q ss_pred             eeec--ChHHHHHHHhhhc-CCEEEE
Q 036707            2 FRIK--DPKVSLDFYSRVL-GMSLLK   24 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vL-G~~v~~   24 (67)
                      |.|.  |+++|++||+++| |+++..
T Consensus        11 L~v~~~d~~~A~~FY~~~f~G~~~~~   36 (136)
T 1u7i_A           11 LMFQGVQAEAAMNFYLSLFDDAEILQ   36 (136)
T ss_dssp             EEEESSCHHHHHHHHHHHCSSEEEEE
T ss_pred             EEECCCCHHHHHHHHHHHcCCCEeeE
Confidence            6776  9999999999999 999975

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=96.97  E-value=0.00064  Score=47.04  Aligned_cols=24  Identities=21%  Similarity=0.444  Sum_probs=21.9

Q ss_pred             eeec--ChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIK--DPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|.  |+++|++||+++|||++..+
T Consensus       190 l~V~~~dl~~a~~FY~~vLGf~~~~~  215 (381)
T 1t47_A          190 GNVELGRMNEWVGFYNKVMGFTNMKE  215 (381)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEECSC
T ss_pred             EeeccccHHHHHHHHHHhhCCEEeee
Confidence            6788  99999999999999998755

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=96.69  E-value=0.0038  Score=37.86  Aligned_cols=24  Identities=4%  Similarity=0.332  Sum_probs=20.2

Q ss_pred             eeec-ChHHHHHHHhhhc-CCEEEEE
Q 036707            2 FRIK-DPKVSLDFYSRVL-GMSLLKR   25 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vL-G~~v~~~   25 (67)
                      |.+. |.++|++||+++| |+++...
T Consensus        10 l~~~~d~~eA~~FY~~~f~G~~~~~~   35 (139)
T 1tsj_A           10 LMFNNQAEEAVKLYTSLFEDSEIITM   35 (139)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCEEEEE
T ss_pred             EEECCCHHHHHHHHHHHcCCCEEEEE
Confidence            3444 9999999999999 9999754

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=96.64  E-value=0.0061  Score=42.16  Aligned_cols=42  Identities=12%  Similarity=0.081  Sum_probs=34.2

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCCC
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTA   44 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~~   44 (67)
                      |.|.|++++..||++ |||.+..+...+.+.....|+......
T Consensus       158 L~v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~h  199 (365)
T 4ghg_A          158 QVTPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTV  199 (365)
T ss_dssp             EEESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSS
T ss_pred             EeecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcc
Confidence            789999999999965 999998777766777778888876543

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=96.33  E-value=0.012  Score=37.43  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=22.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.+.|.+++++||+++||.+++.+..
T Consensus        31 L~f~~a~eAi~FY~~vFG~~~~~~~~   56 (172)
T 3l20_A           31 IAFENSKEALAYYEEVFGATDVKRLE   56 (172)
T ss_dssp             EEESCHHHHHHHHHHHSCCEEEEEEE
T ss_pred             EEECCHHHHHHHHHHHcCCEEEEEEE
Confidence            67889999999999999999876544

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=96.28  E-value=0.009  Score=42.26  Aligned_cols=40  Identities=10%  Similarity=0.013  Sum_probs=28.3

Q ss_pred             eeecC--hHHHHHHHhhhcCCEEEEEEe-----CCCCeEEEEEeccC
Q 036707            2 FRIKD--PKVSLDFYSRVLGMSLLKRLD-----FPEMKFSLYFLGYE   41 (67)
Q Consensus         2 l~V~D--le~Si~FY~~vLG~~v~~~~~-----~~~~~~~l~fL~~g   41 (67)
                      +.|.|  |+++++||+++|||++....+     .+..+....++..+
T Consensus       179 i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~  225 (393)
T 3isq_A          179 GNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY  225 (393)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECT
T ss_pred             EecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECC
Confidence            67787  999999999999999977643     12234444555443

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=96.14  E-value=0.004  Score=44.11  Aligned_cols=26  Identities=23%  Similarity=0.432  Sum_probs=23.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|.|++++++||+++|||+++....
T Consensus        17 i~V~d~~~a~~fY~~~LGf~~v~~~~   42 (393)
T 3isq_A           17 FWVGNAKQAASFYCSKMGFEPLAYRG   42 (393)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEES
T ss_pred             EEECCHHHHHHHHHHhcCCEEEEEEc
Confidence            78999999999999999999987654

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=95.44  E-value=0.039  Score=33.41  Aligned_cols=23  Identities=9%  Similarity=0.468  Sum_probs=19.4

Q ss_pred             eeec-ChHHHHHHHhhhcC-CEEEE
Q 036707            2 FRIK-DPKVSLDFYSRVLG-MSLLK   24 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG-~~v~~   24 (67)
                      |.+. |.+++++||+++|| .++.+
T Consensus        15 L~f~g~a~eA~~FY~~vFg~~~i~~   39 (138)
T 3oms_A           15 LMFEGKAEEAMNFYTSLFDQSEIVS   39 (138)
T ss_dssp             EEESSCHHHHHHHHHTTSTTCCEEE
T ss_pred             EEECCCHHHHHHHHHHHcCCceEEE
Confidence            6677 89999999999999 56654

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=95.32  E-value=0.0078  Score=40.99  Aligned_cols=24  Identities=13%  Similarity=0.337  Sum_probs=21.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      +.|.|++++.+|| ++|||+++.+.
T Consensus        18 ~~V~D~~~~~~fy-~~LGf~~~~~~   41 (357)
T 1cjx_A           18 FASPTPGTLEPIF-EIMGFTKVATH   41 (357)
T ss_dssp             EECSSTTSSHHHH-HHTTCEEEEEE
T ss_pred             EEeCCHHHHHHHH-HHCCCEEEEEe
Confidence            6899999999999 89999998764

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=93.27  E-value=0.033  Score=36.75  Aligned_cols=23  Identities=4%  Similarity=-0.008  Sum_probs=20.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|.|++++.+|| ++|||++..+
T Consensus       164 L~v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          164 ITTSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             EECSCHHHHHHHH-HHTTCCCCGG
T ss_pred             EEeCCHHHHHHHH-HHcCCCcccC
Confidence            7899999999999 9999998754

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=92.32  E-value=0.33  Score=30.44  Aligned_cols=23  Identities=13%  Similarity=0.286  Sum_probs=20.1

Q ss_pred             eeec-ChHHHHHHHhhhc-CCEEEE
Q 036707            2 FRIK-DPKVSLDFYSRVL-GMSLLK   24 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vL-G~~v~~   24 (67)
                      |.+. |-+++++||+++| |.++..
T Consensus        11 L~f~g~a~eAi~FY~~vF~ga~i~~   35 (163)
T 1u69_A           11 LWYDSAALEAATFYAETFPDSAVLA   35 (163)
T ss_dssp             EEESSCHHHHHHHHHHHSTTEEEEE
T ss_pred             EEECCCHHHHHHHHHHHhCCCEEeE
Confidence            5566 8999999999999 999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	67
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-12
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	1e-05
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	5e-05
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	0.002

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 1e-12
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDTASAPADPVDRTVWTFGK 60
          M R+KDPK SLDFY+RVLGM+L+++ DFP MKFSLYFL YED    P +  ++  W   +
Sbjct: 28 MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 87

Query: 61 PATIELT 67
           AT+ELT
Sbjct: 88 KATLELT 94

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 37.7 bits (86), Expect = 1e-05
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY 40
          M R+ D + S+DFY++VLGM LL+  + PE K+SL F+GY
Sbjct: 7  MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGY 46

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 36.2 bits (82), Expect = 5e-05
 Identities = 19/42 (45%), Positives = 27/42 (64%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYED 42
          M R+ D   S+ FY+  LGM +L++ D PE K++L FLGY  
Sbjct: 8  MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGP 49

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 32.2 bits (72), Expect = 0.002
 Identities = 5/33 (15%), Positives = 14/33 (42%)

Query: 1  MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKF 33
          +    +   + D +++VLG  L +++       
Sbjct: 10 LMYGDELPATYDLFTKVLGFYLAEQVLDENGTR 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	67
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.0
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	98.79
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	98.74
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	98.7
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.7
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.51
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	98.5
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.48
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	98.4
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	98.38
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.38
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	98.33
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	98.31
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	98.3
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	98.26
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.24
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.23
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	98.22
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	98.2
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	98.17
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.16
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	98.13
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.12
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	98.11
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	98.09
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	98.04
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	97.95
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	97.88
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	97.74
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	97.43
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	96.93
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	96.8
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	96.62
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	93.69
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	93.61
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	92.54
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	92.25
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	91.91
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	90.0
d1yk3a1	198	Hypothetical protein Rv1347c/MT1389 {Mycobacterium	84.5

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.8e-10  Score=70.02  Aligned_cols=43  Identities=72%  Similarity=1.278  Sum_probs=36.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT   43 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~   43 (67)
                      +|+|+|+++|++||+++|||+++.+...+.+++..+|+..+..
T Consensus        28 ~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~   70 (176)
T d1qipa_          28 MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDK   70 (176)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCG
T ss_pred             EEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCc
Confidence            4899999999999999999999988777777788888776543

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=98.79  E-value=4.1e-09  Score=59.78  Aligned_cols=41  Identities=51%  Similarity=0.940  Sum_probs=32.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|+|+|+++|++||+++|||++..+...+.+.+....+...
T Consensus         7 ~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~   47 (135)
T d1f9za_           7 MLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYG   47 (135)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESS
T ss_pred             EEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccc
Confidence            38999999999999999999998877665655555555443

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=98.74  E-value=4.4e-09  Score=59.60  Aligned_cols=41  Identities=46%  Similarity=0.885  Sum_probs=31.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +|+|+|+++|++||+++|||++..+...+...+...+....
T Consensus         8 ~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~   48 (139)
T d2c21a1           8 MIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYG   48 (139)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESS
T ss_pred             EEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeeccc
Confidence            48999999999999999999998877655544444444443

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=98.70  E-value=9.4e-09  Score=60.27  Aligned_cols=39  Identities=10%  Similarity=0.194  Sum_probs=31.1

Q ss_pred             ecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCC
Q 036707            4 IKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT   43 (67)
Q Consensus         4 V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~   43 (67)
                      |+|+++|++||+++|||++..+...+. ++..++++.++.
T Consensus        17 v~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~~   55 (137)
T d1twua_          17 TGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPHA   55 (137)
T ss_dssp             CSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSSS
T ss_pred             cCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCCC
Confidence            469999999999999999988776433 467788776654

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.70  E-value=1.8e-08  Score=60.88  Aligned_cols=43  Identities=16%  Similarity=0.235  Sum_probs=35.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT   43 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~   43 (67)
                      +|+|+|+++|++||+++|||++..+...+.......|+..+..
T Consensus        10 ~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~   52 (162)
T d1mpya2          10 LMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK   52 (162)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB
T ss_pred             EEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccc
Confidence            4899999999999999999999988777676666667665544

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=98.51  E-value=5.8e-08  Score=56.80  Aligned_cols=25  Identities=20%  Similarity=0.280  Sum_probs=23.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |+|+|+++|++||+++|||++..+.
T Consensus        10 i~V~Dl~~s~~FY~~vLG~~~~~~~   34 (131)
T d1lgta1          10 FAVSDVAAWRSFLTQKLGLMEAGTT   34 (131)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHhhCCceeecC
Confidence            7899999999999999999998764

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=98.50  E-value=4.6e-08  Score=54.89  Aligned_cols=25  Identities=20%  Similarity=0.349  Sum_probs=23.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        10 L~v~D~~~s~~FY~~~LG~~~~~~~   34 (120)
T d1xrka_          10 LTARDVAEAVEFWTDRLGFSRVFVE   34 (120)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEECCHHHHHHHHHHhhCCeEEEEC
Confidence            7899999999999999999998764

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.48  E-value=1.7e-07  Score=57.62  Aligned_cols=42  Identities=10%  Similarity=0.022  Sum_probs=34.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDT   43 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g~~   43 (67)
                      +|+|+|+++|++|| ++|||++..+...+.+....+|+..+..
T Consensus        10 ~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~   51 (176)
T d1f1ua2          10 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT   51 (176)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS
T ss_pred             EEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc
Confidence            38899999999999 7899999888777676777788776554

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=98.40  E-value=1.6e-07  Score=54.74  Aligned_cols=28  Identities=25%  Similarity=0.312  Sum_probs=24.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF   28 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~   28 (67)
                      +|.|+|+++|++||+++|||+++.+...
T Consensus        11 ~l~v~Dl~~s~~FY~~vLG~~~~~~~~~   38 (144)
T d1zswa1          11 SMVTKNANENNHFYKNVLGLRRVKMTVN   38 (144)
T ss_dssp             EEEESCHHHHHHHHHTTTCCEEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHhCCeeEeeecc
Confidence            3789999999999999999999877543

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=98.38  E-value=1.4e-07  Score=53.30  Aligned_cols=24  Identities=17%  Similarity=0.234  Sum_probs=22.4

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++|||++..+
T Consensus        11 L~v~Dl~~s~~FY~~vLG~~~~~~   34 (122)
T d1jifa_          11 LTAVDVPANVSFWVDTLGFEKDFG   34 (122)
T ss_dssp             EEESSHHHHHHHHHHTTCCEEEEE
T ss_pred             EEcCCHHHHHHHHHhhhCCceEec
Confidence            789999999999999999999765

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.38  E-value=2e-07  Score=54.59  Aligned_cols=25  Identities=20%  Similarity=0.312  Sum_probs=23.1

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |+|+|+++|++||+++|||++..+.
T Consensus        10 i~v~Dl~~s~~FY~~vLG~~~~~~~   34 (132)
T d1kw3b1          10 FAVKDVPAWDHFLTKSVGLMAAGSA   34 (132)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEeCCHHHHHHHHHHHhCCceeccc
Confidence            7899999999999999999997764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1e-07  Score=56.38  Aligned_cols=29  Identities=21%  Similarity=0.405  Sum_probs=25.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP   29 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~   29 (67)
                      +|.|+|+++|++||+++|||+++.+...+
T Consensus        16 ~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~   44 (149)
T d1sqia1          16 TFWVGNAKQAASFYCNKMGFEPLAYKGLE   44 (149)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEESGG
T ss_pred             EEEcCCHHHHHHHHhhccceEEEEEeccc
Confidence            37899999999999999999998876543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=98.31  E-value=9.5e-07  Score=49.11  Aligned_cols=26  Identities=12%  Similarity=0.285  Sum_probs=23.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |.|+|+++|++||+++|||++..+..
T Consensus         9 l~v~Dl~~a~~FY~~~lG~~~~~~~~   34 (113)
T d1xqaa_           9 LTVADVVAAREFLEKYFGLTCSGTRG   34 (113)
T ss_dssp             EEESCHHHHHHHHHHHHCCEEEEEET
T ss_pred             EEeCCHHHHHHHHHHhhCCEEEEeec
Confidence            78999999999999999999987653

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=98.30  E-value=4.7e-07  Score=54.31  Aligned_cols=41  Identities=22%  Similarity=0.358  Sum_probs=30.0

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCC--eEEEEEeccC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEM--KFSLYFLGYE   41 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~--~~~l~fL~~g   41 (67)
                      +|.|+|+++|++||+++|||+++.+...+.+  ....+++..+
T Consensus        12 ~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~   54 (163)
T d1t47a1          12 VFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG   54 (163)
T ss_dssp             EEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET
T ss_pred             EEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC
Confidence            3789999999999999999999887643322  2344455444

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=98.26  E-value=7.1e-07  Score=51.14  Aligned_cols=38  Identities=18%  Similarity=0.339  Sum_probs=29.3

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFL   38 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL   38 (67)
                      .|.|+|+++|++||+++||+++......+..+....+.
T Consensus        12 ~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~   49 (145)
T d1jc4a_          12 AYACPDADEASKYYQETFGWHELHREENPEQGVVEIMM   49 (145)
T ss_dssp             EEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEE
T ss_pred             EEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEee
Confidence            37899999999999999999998776654444444443

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.24  E-value=1.9e-07  Score=56.18  Aligned_cols=29  Identities=24%  Similarity=0.263  Sum_probs=25.4

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP   29 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~   29 (67)
                      +|.|+|+++|++||+++|||++..+...+
T Consensus        17 ~i~V~Dle~a~~fY~~~LGf~~~~~~~~~   45 (167)
T d1sqda1          17 EFWCGDATNVARRFSWGLGMRFSAKSDLS   45 (167)
T ss_dssp             EEECSCHHHHHHHHHHHHTCEEEEEESGG
T ss_pred             EEEeCCHHHHHHHHHHHhCCeEEEEeecc
Confidence            37899999999999999999998876543

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.23  E-value=9.2e-07  Score=53.27  Aligned_cols=44  Identities=27%  Similarity=0.468  Sum_probs=31.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC---CCCeEEEEEeccCCCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF---PEMKFSLYFLGYEDTA   44 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~---~~~~~~l~fL~~g~~~   44 (67)
                      +|+|+|+++|++||+++|||++..+...   ......+.|+..+...
T Consensus        15 ~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~   61 (156)
T d1kw3b2          15 VRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRH   61 (156)
T ss_dssp             EEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBS
T ss_pred             EEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeecccc
Confidence            3789999999999999999999665432   2223455666665443

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=98.22  E-value=3.4e-07  Score=52.40  Aligned_cols=28  Identities=14%  Similarity=0.120  Sum_probs=24.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF   28 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~   28 (67)
                      +|.|+|+++|++||+++|||++..+...
T Consensus         9 ~l~v~d~~~s~~FY~~~lG~~~~~~~~~   36 (130)
T d1r9ca_           9 TFIVRDLERMTRILEGVFDAREVYASDT   36 (130)
T ss_dssp             EEEESCHHHHHHHHHHHHCCEEEEEGGG
T ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEEcCC
Confidence            3789999999999999999999887553

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=98.20  E-value=1.8e-06  Score=49.81  Aligned_cols=41  Identities=12%  Similarity=0.275  Sum_probs=30.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeC-----------CCCeEEEEEeccCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDF-----------PEMKFSLYFLGYED   42 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~-----------~~~~~~l~fL~~g~   42 (67)
                      +|.|+|+++|++||++ |||++..+...           +.....++|+...+
T Consensus        14 ~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   65 (149)
T d1ss4a_          14 SIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPD   65 (149)
T ss_dssp             EEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecc
Confidence            3789999999999998 99999877542           23345677776654

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=98.17  E-value=1.5e-06  Score=52.93  Aligned_cols=26  Identities=8%  Similarity=0.171  Sum_probs=23.7

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEE
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      .|+|+|+++|++||+++|||+++.+.
T Consensus        17 ~L~V~Dle~s~~FY~~vLG~~~~~~~   42 (170)
T d1zswa2          17 ELTVRRLDKMASTLTEIFGYTEVSRN   42 (170)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEeec
Confidence            37899999999999999999998764

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.16  E-value=3.4e-07  Score=55.79  Aligned_cols=29  Identities=24%  Similarity=0.237  Sum_probs=25.5

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEeCC
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLDFP   29 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~~~   29 (67)
                      +|.|+|+++|++||+++|||+++.+...+
T Consensus        18 ~i~V~D~e~a~~FY~~~LGf~~v~~~~~~   46 (172)
T d1sp8a1          18 ELWCADAASAAGRFSFGLGAPLAARSDLS   46 (172)
T ss_dssp             EEECSCHHHHHHHHHHHHTCCEEEEESGG
T ss_pred             EEEeCCHHHHHHHHHHhhCceEEEEeccc
Confidence            47899999999999999999998876543

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.13  E-value=5.6e-07  Score=49.72  Aligned_cols=25  Identities=24%  Similarity=0.489  Sum_probs=22.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus         8 l~v~d~~~a~~FY~~~lG~~~~~~~   32 (111)
T d2pjsa1           8 IATPEPARAQAFYGDILGMPVAMDH   32 (111)
T ss_dssp             EECSCGGGGHHHHTTTTCCCEEEEC
T ss_pred             EEeCCHHHHHHHHHHhhCCceeecc
Confidence            7899999999999999999997653

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.12  E-value=2.4e-06  Score=50.22  Aligned_cols=25  Identities=28%  Similarity=0.446  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        22 l~v~Dl~~s~~FY~~~lG~~~~~~~   46 (146)
T d1f1ua1          22 IVVTDLAKSREFYVDVLGLHVTEED   46 (146)
T ss_dssp             EEESCHHHHHHHHTTTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHhccCcEEEeec
Confidence            7899999999999999999998753

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=98.11  E-value=1.2e-06  Score=51.01  Aligned_cols=25  Identities=28%  Similarity=0.506  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRL   26 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~   26 (67)
                      |.|+|+++|++||+++|||++..+.
T Consensus        13 l~v~D~~~s~~FY~~vLG~~~~~~~   37 (145)
T d1mpya1          13 LRVLDMSKALEHYVELLGLIEMDRD   37 (145)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHHHHhhCCEEEEee
Confidence            7899999999999999999998764

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.09  E-value=1.2e-06  Score=50.38  Aligned_cols=27  Identities=33%  Similarity=0.589  Sum_probs=24.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|.|+|+++|++||+++|||++..+.+
T Consensus         9 ~l~v~d~~~~~~FY~~~lG~~~~~~~~   35 (134)
T d1nkia_           9 TLAVADLPASIAFYRDLLGFRLEARWD   35 (134)
T ss_dssp             EEEESCHHHHHHHHHHTTCCEEEEEET
T ss_pred             EEEeCCHHHHHHHHHHhhCCeEEEecc
Confidence            478999999999999999999987653

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=98.04  E-value=1.5e-06  Score=50.35  Aligned_cols=27  Identities=26%  Similarity=0.570  Sum_probs=23.8

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +|.|+|+++|++||+++|||++..+..
T Consensus         9 ~l~v~d~~~~~~FY~~vLG~~~~~~~~   35 (140)
T d1npba_           9 TLAVSDLQKSVTFWHELLGLTLHARWN   35 (140)
T ss_dssp             EEEESCHHHHHHHHHTTSCCEEEEEET
T ss_pred             EEEeCCHHHHHHHHHHHhCCEEEEEec
Confidence            378999999999999999999977643

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.95  E-value=3.4e-06  Score=47.61  Aligned_cols=23  Identities=30%  Similarity=0.590  Sum_probs=20.9

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||++ |||++...
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~   30 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFR   30 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEE
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEe
Confidence            789999999999987 99999765

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.88  E-value=2.5e-06  Score=48.43  Aligned_cols=24  Identities=4%  Similarity=-0.114  Sum_probs=22.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |.|+|+++|++||+++||+++...
T Consensus         8 i~V~di~~a~~FYe~~lg~~~~~~   31 (115)
T d2i7ra1           8 IIVSNVPQVCADLEHILDKKADYA   31 (115)
T ss_dssp             EECSCHHHHHHHHHHHHTSCCSEE
T ss_pred             EEECCHHHHHHHHHHhhCCceeee
Confidence            789999999999999999998654

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=4.5e-06  Score=48.16  Aligned_cols=26  Identities=12%  Similarity=0.107  Sum_probs=19.5

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +.|.|.++|++||+++||++++.+..
T Consensus        13 v~~~~~~eAi~FY~~~fG~~~~~~~~   38 (135)
T d1xy7a_          13 VEAQKVGDAVTFYKSAFGAIESGHSL   38 (135)
T ss_dssp             ECTTCHHHHHHHHHHHHCCEEC----
T ss_pred             EECCCHHHHHHHHHHHhCCEEEEEEe
Confidence            44569999999999999999876543

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=97.43  E-value=2.5e-05  Score=44.27  Aligned_cols=26  Identities=23%  Similarity=0.540  Sum_probs=21.1

Q ss_pred             CeeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            1 MFRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         1 ~l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      .|.|+|+++|++||++ |||.+.....
T Consensus         7 ~l~V~D~~~s~~FY~~-Lg~~~~~~~~   32 (128)
T d1klla_           7 AVVVEDMAKSMEFYRK-MGVEIPAEAD   32 (128)
T ss_dssp             EEEESCHHHHHHHHHH-TTCCCCTTGG
T ss_pred             EEEcCCHHHHHHHHHH-hCCccccccc
Confidence            3789999999999966 8998865433

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=96.93  E-value=0.00037  Score=43.78  Aligned_cols=29  Identities=10%  Similarity=0.230  Sum_probs=24.2

Q ss_pred             eeec--ChHHHHHHHhhhcCCEEEEEEeCCC
Q 036707            2 FRIK--DPKVSLDFYSRVLGMSLLKRLDFPE   30 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vLG~~v~~~~~~~~   30 (67)
                      +.|.  ||++++.||+++|||++..+++.++
T Consensus        11 ~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~   41 (203)
T d1cjxa2          11 HNVYRGRMVYWANFYEKLFNFREARYFDIKG   41 (203)
T ss_dssp             EECCTTHHHHHHHHHHHHHCCEEEEEEEEEC
T ss_pred             eccChhhHHHHHHHHHHHhCCEEeEEEecCC
Confidence            5676  9999999999999999987765433

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=96.80  E-value=0.00057  Score=43.60  Aligned_cols=26  Identities=4%  Similarity=0.178  Sum_probs=23.0

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +.|.|++++++||+++|||+...+..
T Consensus        15 i~V~dld~a~~fY~~vLGf~~~~~~~   40 (224)
T d1sp8a2          15 GNVPELAPAAAYFAGFTGFHEFAEFT   40 (224)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEE
T ss_pred             EeccCHHHHHHHHHHHhCCEEEEEec
Confidence            68999999999999999999876653

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.62  E-value=0.0014  Score=37.61  Aligned_cols=26  Identities=19%  Similarity=0.286  Sum_probs=21.6

Q ss_pred             eeec-ChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIK-DPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      |... |.+++++||+++||+++..+..
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~   34 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLP   34 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEE
Confidence            4554 8999999999999999977554

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=93.69  E-value=0.02  Score=35.66  Aligned_cols=24  Identities=21%  Similarity=0.444  Sum_probs=20.5

Q ss_pred             eeec--ChHHHHHHHhhhcCCEEEEE
Q 036707            2 FRIK--DPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         2 l~V~--Dle~Si~FY~~vLG~~v~~~   25 (67)
                      +.|.  +|+.++.||+++|||+...+
T Consensus        12 ~avp~~~l~~av~fY~~vfGf~~~~~   37 (199)
T d1t47a2          12 GNVELGRMNEWVGFYNKVMGFTNMKE   37 (199)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEECSC
T ss_pred             eccChhhHHHHHHHHHHHhCCeEeeE
Confidence            4666  99999999999999988654

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.61  E-value=0.1  Score=29.61  Aligned_cols=20  Identities=10%  Similarity=0.376  Sum_probs=16.7

Q ss_pred             ChHHHHHHHhhhcCCEEEEE
Q 036707            6 DPKVSLDFYSRVLGMSLLKR   25 (67)
Q Consensus         6 Dle~Si~FY~~vLG~~v~~~   25 (67)
                      |-+++++||+++||.+.+.+
T Consensus        16 ~a~eAi~FY~~~Fg~~~v~~   35 (134)
T d1u7ia_          16 QAEAAMNFYLSLFDDAEILQ   35 (134)
T ss_dssp             CHHHHHHHHHHHCSSEEEEE
T ss_pred             CHHHHHHHHHHhCCCeEEEE
Confidence            68899999999999876443

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.54  E-value=0.041  Score=34.38  Aligned_cols=23  Identities=13%  Similarity=0.108  Sum_probs=19.5

Q ss_pred             eeecC--hHHHHHHHhhhcCCEEEE
Q 036707            2 FRIKD--PKVSLDFYSRVLGMSLLK   24 (67)
Q Consensus         2 l~V~D--le~Si~FY~~vLG~~v~~   24 (67)
                      +.|.+  |+.++.||+++|||+...
T Consensus        30 ~~Vp~~~ld~av~fY~~vfGf~~~~   54 (210)
T d1sqia2          30 GNQPDQEMESASEWYLKNLQFHRFW   54 (210)
T ss_dssp             EECCTTCHHHHHHHHHHHHCCEEEC
T ss_pred             eccCchhHHHHHHHHHHHhCCEEEE
Confidence            46766  999999999999998644

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.25  E-value=0.066  Score=33.81  Aligned_cols=26  Identities=8%  Similarity=0.175  Sum_probs=22.7

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +.|.|++++++||+++||+.......
T Consensus        28 iaVpdld~a~~~y~~~lG~~~~~~~~   53 (230)
T d1sqda2          28 GNVPELGPALTYVAGFTGFHQFAEFT   53 (230)
T ss_dssp             EECSCHHHHHHHHHHHHCCEEEEEEC
T ss_pred             ecccCHHHHHHHHHHHcCCeeeEEec
Confidence            67889999999999999998876543

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=91.91  E-value=0.042  Score=32.25  Aligned_cols=25  Identities=12%  Similarity=0.244  Sum_probs=21.6

Q ss_pred             eeecChHHHHHHHhhhcCCEEEEEEe
Q 036707            2 FRIKDPKVSLDFYSRVLGMSLLKRLD   27 (67)
Q Consensus         2 l~V~Dle~Si~FY~~vLG~~v~~~~~   27 (67)
                      +.|.|++++.+||+. |||+.+.+..
T Consensus        15 fav~d~~~~~~~~~~-lGF~~~~~~~   39 (150)
T d1cjxa1          15 FASPTPGTLEPIFEI-MGFTKVATHR   39 (150)
T ss_dssp             EECSSTTSSHHHHHH-TTCEEEEEES
T ss_pred             EecCCHHHHHHHHHH-hCCEEEeccc
Confidence            578999999999975 9999987654

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=90.00  E-value=0.14  Score=29.03  Aligned_cols=21  Identities=10%  Similarity=0.263  Sum_probs=16.8

Q ss_pred             eeec-ChHHHHHHHhhhcCCEE
Q 036707            2 FRIK-DPKVSLDFYSRVLGMSL   22 (67)
Q Consensus         2 l~V~-Dle~Si~FY~~vLG~~v   22 (67)
                      |.+. |-+++++||+++||-..
T Consensus        10 l~f~g~a~eAi~FY~~vFg~~~   31 (129)
T d1tsja_          10 LMFNNQAEEAVKLYTSLFEDSE   31 (129)
T ss_dssp             EECSSCHHHHHHHHHHHSSSCE
T ss_pred             EEECCCHHHHHHHHHHHcCCcE
Confidence            4554 89999999999997643

>d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Hypothetical protein Rv1347c/MT1389
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.50  E-value=1.1  Score=25.91  Aligned_cols=35  Identities=17%  Similarity=0.214  Sum_probs=28.7

Q ss_pred             ChHHHHHHHhhhcCCEEEEEEeCCCCeEEEEEeccC
Q 036707            6 DPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYE   41 (67)
Q Consensus         6 Dle~Si~FY~~vLG~~v~~~~~~~~~~~~l~fL~~g   41 (67)
                      +-.+|+++|+ .+||+...+.+.+..+..++.+..+
T Consensus       163 ~N~~s~rl~e-rlGF~~~ge~d~~~~~~~l~~~~r~  197 (198)
T d1yk3a1         163 RNTATRRLCE-WAGCKFLGEHDTTNRRMALYALEAP  197 (198)
T ss_dssp             TCHHHHHHHH-HHTCEEEEEEECSSCEEEEEEEECC
T ss_pred             CCHHHHHHHH-HcCCEEEeEEecCCCcEEEEEEeCC
Confidence            5679999996 5899999998888888888777643