Citrus Sinensis ID: 036785

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520---
MEEKRQEQCVVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYSLGSHTDNLLIASS
cHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccHHHHccHHHHHHHHHHHHHHHcccccccccccccc
cHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcEcEcccccccccccccEccccEcccccEccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHHccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHccccEccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEccccccHHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccc
meekrqeqcvvvkqpkyfqISFGLLFYMMALTLPLIvqchdsfnygdaLSKSLLYFEsqrsgrlphnqrvtwrhhsgltdgleqGVDLVggyydagdnvkfglpMAFTITMLSWGVIqyggeisdageyHHAIEAIKWGTDYFikahthphvlwvevgdgdtdhycwqrpedmttsrraykvdernpgsdvagETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEfgdkyrgkydssievvkgyypsvsgYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLnknnetnvdrtpggllyirqwdnmQYVSTAAFLLTVYGDYLQstnqtlkcdrgtltpreLFDFAKSQVDYILGSNPMAVSYLVGygskfpqrmhhrggstvsykqdqgfigctqgyddwfkrldpnpnvvvgalvggpdekdqfrdersnfvqteactyNTATLVGVFAKLRRLYSlgshtdnlliass
meekrqeqcvvvkqpkyFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRpedmttsrraykvdernpgsdvAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNknnetnvdrTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFvqteactyntATLVGVFAKLRRLyslgshtdnlliass
MEEKRQEQCVVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETaaamaaaSIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYSLGSHTDNLLIASS
********CVVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQR**************************AAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGG***********SNFVQTEACTYNTATLVGVFAKLRRLYSLGSHTDNLL****
************KQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYS*************
*********VVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVD************AAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYSLGSHTDNLLIASS
*****QEQCVVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYS*************
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEEKRQEQCVVVKQPKYFQISFGLLFYMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYSLGSHTDNLLIASS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query523 2.2.26 [Sep-21-2011]
O48766525 Endoglucanase 11 OS=Arabi yes no 0.946 0.942 0.701 0.0
Q6H3Z9556 Endoglucanase 22 OS=Oryza yes no 0.891 0.838 0.677 0.0
Q6Z5P2531 Endoglucanase 7 OS=Oryza yes no 0.892 0.879 0.691 0.0
Q654U4538 Endoglucanase 16 OS=Oryza no no 0.889 0.864 0.682 0.0
Q67UW5534 Endoglucanase 5 OS=Oryza no no 0.879 0.861 0.651 0.0
Q84Q51529 Endoglucanase 21 OS=Oryza no no 0.885 0.875 0.656 1e-178
Q42059 620 Endoglucanase 6 OS=Arabid no no 0.896 0.756 0.611 1e-173
Q8L7I0 626 Endoglucanase 19 OS=Arabi no no 0.889 0.742 0.610 1e-171
Q5NAT0 640 Endoglucanase 2 OS=Oryza no no 0.912 0.745 0.581 1e-166
Q6L4I2 629 Endoglucanase 15 OS=Oryza no no 0.919 0.764 0.567 1e-161
>sp|O48766|GUN11_ARATH Endoglucanase 11 OS=Arabidopsis thaliana GN=At2g32990 PE=2 SV=1 Back     alignment and function desciption
 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/503 (70%), Positives = 418/503 (83%), Gaps = 8/503 (1%)

Query: 10  VVVKQPKYFQISFGLLFYMMALTLPLIVQCHDS----FNYGDALSKSLLYFESQRSGRLP 65
           + V   ++ Q  F LL  +   +  L     ++    F+YG+ALSKSLLYFE+QRSGRLP
Sbjct: 1   MTVMNHRHKQCHFLLLLLITVFSAALDGVSSETDVGGFDYGEALSKSLLYFEAQRSGRLP 60

Query: 66  HNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYGGEISD 125
           +NQRVTWR HSGLTDGLEQGVDLVGGY+DAGD+VKFGLPMAFT+TMLSW VI+YG  ++ 
Sbjct: 61  YNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLAS 120

Query: 126 AGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDER 185
            GE  HA+EAIKWGTDYFIKAHT P+VLW EVGDGDTDHYCWQRPEDMTTSRRA+K+DE 
Sbjct: 121 TGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDEN 180

Query: 186 NPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGY 245
           NPGSD+AGETAAAMAAASIVFR  NPHYSHLLLHHAQQLFEFGDKYRGKYD S++VVK Y
Sbjct: 181 NPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVKSY 240

Query: 246 YPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQII 305
           Y SVSGYMDELLW A WLY+ATDNE Y+ YV+D A + GG++WA++EFSWDVK+AGVQ++
Sbjct: 241 YASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLL 300

Query: 306 ASMV---NNHKEHEQVLERYGSKAEFYLCACLNKN-NETNVDRTPGGLLYIRQWDNMQYV 361
           ASM+     HK+H +VL++Y SKA+ YLC+ LNKN N TNV RTP GLLY+RQW+NMQYV
Sbjct: 301 ASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQWNNMQYV 360

Query: 362 STAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGS 421
           STA+FLLTVY D+L+ +N  L+C  GT+TP E+  FAKSQ+DYILGSNPM  SYLVGYG 
Sbjct: 361 STASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETSYLVGYGP 420

Query: 422 KFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDE 481
           K+P R+HHRG S  S+K+ +GFIGCTQGYD+W+ R +PNP+V+VGALVGGPD +D F D 
Sbjct: 421 KYPIRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDHQDDFDDR 480

Query: 482 RSNFVQTEACTYNTATLVGVFAK 504
           R N+VQTEACTYNTA LVGVFA+
Sbjct: 481 RGNYVQTEACTYNTAPLVGVFAR 503

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q6H3Z9|GUN22_ORYSJ Endoglucanase 22 OS=Oryza sativa subsp. japonica GN=GLU11 PE=2 SV=2 Back     alignment and function description
>sp|Q6Z5P2|GUN7_ORYSJ Endoglucanase 7 OS=Oryza sativa subsp. japonica GN=GLU10 PE=2 SV=1 Back     alignment and function description
>sp|Q654U4|GUN16_ORYSJ Endoglucanase 16 OS=Oryza sativa subsp. japonica GN=Os06g0247900 PE=2 SV=2 Back     alignment and function description
>sp|Q67UW5|GUN5_ORYSJ Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1 Back     alignment and function description
>sp|Q84Q51|GUN21_ORYSJ Endoglucanase 21 OS=Oryza sativa subsp. japonica GN=GLU9 PE=2 SV=1 Back     alignment and function description
>sp|Q42059|GUN6_ARATH Endoglucanase 6 OS=Arabidopsis thaliana GN=At1g64390 PE=2 SV=2 Back     alignment and function description
>sp|Q8L7I0|GUN19_ARATH Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1 Back     alignment and function description
>sp|Q5NAT0|GUN2_ORYSJ Endoglucanase 2 OS=Oryza sativa subsp. japonica GN=GLU5 PE=1 SV=1 Back     alignment and function description
>sp|Q6L4I2|GUN15_ORYSJ Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
255577171510 endo-1,4-beta-glucanase, putative [Ricin 0.929 0.952 0.777 0.0
356499402515 PREDICTED: endoglucanase 11-like [Glycin 0.942 0.957 0.744 0.0
356553545520 PREDICTED: LOW QUALITY PROTEIN: endogluc 0.927 0.932 0.752 0.0
347466585524 endo-1,4-beta-glucanase [Populus trichoc 0.952 0.950 0.730 0.0
359494151510 PREDICTED: endoglucanase 11-like [Vitis 0.931 0.954 0.755 0.0
357493259517 Endoglucanase [Medicago truncatula] gi|3 0.969 0.980 0.697 0.0
347466583528 endo-1,4-beta-glucanase [Populus trichoc 0.994 0.984 0.702 0.0
224131672526 glycosyl hydrolase family 9 [Populus tri 0.994 0.988 0.702 0.0
388501862517 unknown [Medicago truncatula] 0.969 0.980 0.693 0.0
297789870527 predicted protein [Arabidopsis lyrata su 0.883 0.876 0.744 0.0
>gi|255577171|ref|XP_002529469.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223531085|gb|EEF32935.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/489 (77%), Positives = 430/489 (87%), Gaps = 3/489 (0%)

Query: 37  VQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAG 96
           +    SFNY DALSKSLLYFESQRSGRLP+NQRVTWRHHSGLTDGLEQGVDLVGGYYDAG
Sbjct: 21  IPTSQSFNYADALSKSLLYFESQRSGRLPYNQRVTWRHHSGLTDGLEQGVDLVGGYYDAG 80

Query: 97  DNVKFGLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVE 156
           DNVKFGLPMAFTITMLSWGVI+YG EI DAGEY HA+EAIKWGTDYFIKAHTHP+VLWV+
Sbjct: 81  DNVKFGLPMAFTITMLSWGVIEYGNEIGDAGEYEHALEAIKWGTDYFIKAHTHPNVLWVQ 140

Query: 157 VGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHL 216
           VGDG TDHYCWQRPEDMTTSR+AYKVD  NPGSDVAGETAAA+AAASIVFRK NPHYSHL
Sbjct: 141 VGDGYTDHYCWQRPEDMTTSRQAYKVDANNPGSDVAGETAAALAAASIVFRKTNPHYSHL 200

Query: 217 LLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYV 276
           LLHHAQQLFEFGDKYRGKYD S++VVKGYY SVSGY DELLW A+WLYKATDNEAYL YV
Sbjct: 201 LLHHAQQLFEFGDKYRGKYDESVKVVKGYYTSVSGYKDELLWGALWLYKATDNEAYLMYV 260

Query: 277 LDNADRFGGITWAITEFSWDVKYAGVQIIASMV---NNHKEHEQVLERYGSKAEFYLCAC 333
           L+NA  FGGITWAI+EFSWDVK+ G+QI+ASM+     HK+H+ +LE Y SKAE+YLC+C
Sbjct: 261 LENAHGFGGITWAISEFSWDVKFPGLQILASMLLTEERHKKHKHILEHYQSKAEYYLCSC 320

Query: 334 LNKNNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRE 393
           L++NN TNV RTPGGLLYIRQW+N+QYVSTAAFLLTVY D+L ++NQ LKCDRG L P+E
Sbjct: 321 LDQNNVTNVKRTPGGLLYIRQWNNLQYVSTAAFLLTVYSDHLLASNQRLKCDRGILDPQE 380

Query: 394 LFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDW 453
           +   AKSQ+DYILG+NP+ +SYLVGYG+++PQR+HHRG S  SYK ++GFIGCTQGYD W
Sbjct: 381 ILSVAKSQIDYILGANPVGMSYLVGYGTEYPQRVHHRGASIESYKGNKGFIGCTQGYDMW 440

Query: 454 FKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYSLGS 513
           + R DPNPNVVVGALVGGPDEKD+F DER N++QTEACTYNTA+LVGV A+L+ L     
Sbjct: 441 YNRQDPNPNVVVGALVGGPDEKDEFSDERGNYMQTEACTYNTASLVGVLARLQSLTEDDF 500

Query: 514 HTDNLLIAS 522
             +  L+AS
Sbjct: 501 SANPSLLAS 509

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356499402|ref|XP_003518530.1| PREDICTED: endoglucanase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|356553545|ref|XP_003545115.1| PREDICTED: LOW QUALITY PROTEIN: endoglucanase 11-like [Glycine max] Back     alignment and taxonomy information
>gi|347466585|gb|AEO97205.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466639|gb|AEO97232.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359494151|ref|XP_002277353.2| PREDICTED: endoglucanase 11-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357493259|ref|XP_003616918.1| Endoglucanase [Medicago truncatula] gi|355518253|gb|AES99876.1| Endoglucanase [Medicago truncatula] Back     alignment and taxonomy information
>gi|347466583|gb|AEO97204.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466637|gb|AEO97231.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224131672|ref|XP_002321149.1| glycosyl hydrolase family 9 [Populus trichocarpa] gi|222861922|gb|EEE99464.1| glycosyl hydrolase family 9 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388501862|gb|AFK38997.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297789870|ref|XP_002862860.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297308612|gb|EFH39118.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query523
TAIR|locus:2059375525 GH9B8 "glycosyl hydrolase 9B8" 0.891 0.887 0.727 9.7e-199
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.906 0.764 0.594 6.5e-161
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.912 0.761 0.588 2.8e-160
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.936 0.781 0.532 1.9e-147
TAIR|locus:2042441490 GH9B10 "glycosyl hydrolase 9B1 0.868 0.926 0.498 3e-124
TAIR|locus:2042376491 GH9B9 "glycosyl hydrolase 9B9" 0.869 0.926 0.490 2.1e-123
TAIR|locus:2042451491 GH9B11 "glycosyl hydrolase 9B1 0.871 0.928 0.487 1.1e-121
TAIR|locus:2042461492 GH9B12 "glycosyl hydrolase 9B1 0.871 0.926 0.483 5.8e-121
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.919 0.960 0.483 1.6e-118
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.902 0.985 0.458 7.9e-117
TAIR|locus:2059375 GH9B8 "glycosyl hydrolase 9B8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1924 (682.3 bits), Expect = 9.7e-199, P = 9.7e-199
 Identities = 342/470 (72%), Positives = 400/470 (85%)

Query:    43 FNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFG 102
             F+YG+ALSKSLLYFE+QRSGRLP+NQRVTWR HSGLTDGLEQGVDLVGGY+DAGD+VKFG
Sbjct:    38 FDYGEALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFG 97

Query:   103 LPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDT 162
             LPMAFT+TMLSW VI+YG  ++  GE  HA+EAIKWGTDYFIKAHT P+VLW EVGDGDT
Sbjct:    98 LPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDT 157

Query:   163 DHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHAQ 222
             DHYCWQRPEDMTTSRRA+K+DE NPGSD+AGET       SIVFR  NPHYSHLLLHHAQ
Sbjct:   158 DHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQ 217

Query:   223 QLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADR 282
             QLFEFGDKYRGKYD S++VVK YY SVSGYMDELLW A WLY+ATDNE Y+ YV+D A +
Sbjct:   218 QLFEFGDKYRGKYDESLKVVKSYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQ 277

Query:   283 FGGITWAITEFSWDVKYAGVQIIASMV---NNHKEHEQVLERYGSKAEFYLCACLNKN-N 338
              GG++WA++EFSWDVK+AGVQ++ASM+     HK+H +VL++Y SKA+ YLC+ LNKN N
Sbjct:   278 LGGLSWAMSEFSWDVKFAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNIN 337

Query:   339 ETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFA 398
              TNV RTP GLLY+RQW+NMQYVSTA+FLLTVY D+L+ +N  L+C  GT+TP E+  FA
Sbjct:   338 GTNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFA 397

Query:   399 KSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLD 458
             KSQ+DYILGSNPM  SYLVGYG K+P R+HHRG S  S+K+ +GFIGCTQGYD+W+ R +
Sbjct:   398 KSQIDYILGSNPMETSYLVGYGPKYPIRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSE 457

Query:   459 PNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRL 508
             PNP+V+VGALVGGPD +D F D R N+VQTEACTYNTA LVGVFA+L  L
Sbjct:   458 PNPSVLVGALVGGPDHQDDFDDRRGNYVQTEACTYNTAPLVGVFARLIEL 507
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042441 GH9B10 "glycosyl hydrolase 9B10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042376 GH9B9 "glycosyl hydrolase 9B9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042451 GH9B11 "glycosyl hydrolase 9B11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042461 GH9B12 "glycosyl hydrolase 9B12" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q6H3Z9GUN22_ORYSJ3, ., 2, ., 1, ., 40.67710.89100.8381yesno
Q6Z5P2GUN7_ORYSJ3, ., 2, ., 1, ., 40.69180.89290.8794yesno
O48766GUN11_ARATH3, ., 2, ., 1, ., 40.70170.94640.9428yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00027271001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (507 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
PLN02420525 PLN02420, PLN02420, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN02340 614 PLN02340, PLN02340, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
PLN02909486 PLN02909, PLN02909, Endoglucanase 1e-174
PLN02308492 PLN02308, PLN02308, endoglucanase 1e-170
PLN03009495 PLN03009, PLN03009, cellulase 1e-163
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-149
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information 
 Score =  830 bits (2144), Expect = 0.0
 Identities = 357/514 (69%), Positives = 419/514 (81%), Gaps = 11/514 (2%)

Query: 1   MEEKRQEQCVVVKQPKYFQISFGLLFYMM--ALTLPLIVQCHDSFNYGDALSKSLLYFES 58
           M            +P +F +   LL  +   AL           F+YG+ALSKSLLYFE+
Sbjct: 1   MTVMDHRH-----KPCHFLLLLLLLITVFSAALAGVSSETDVGRFDYGEALSKSLLYFEA 55

Query: 59  QRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQ 118
           QRSGRLP+NQRVTWR HSGLTDGLEQGVDLVGGY+DAGD+VKFGLPMAFT+TMLSW VI+
Sbjct: 56  QRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIE 115

Query: 119 YGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRR 178
           YG +++  GE  HA+EAIKWGTDYFIKAHT P+VLW EVGDGDTDHYCWQRPEDMTTSRR
Sbjct: 116 YGDQLASTGELSHALEAIKWGTDYFIKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRR 175

Query: 179 AYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSS 238
           A+K+DE NPGSD+AGETAAAMAAASIVFR  NPHYSHLLLHHAQQLFEFGDKYRGKYD S
Sbjct: 176 AFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDES 235

Query: 239 IEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNADRFGGITWAITEFSWDVK 298
           ++VVK YY SVSGYMDELLW A WLY+ATDNE Y+ YV+D A + GG++WA++EFSWDVK
Sbjct: 236 LKVVKSYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVK 295

Query: 299 YAGVQIIASMV---NNHKEHEQVLERYGSKAEFYLCACLNKN-NETNVDRTPGGLLYIRQ 354
           YAGVQ++ASM+     HK+H +VL++Y SKA+ YLC+ LNKN N TNV RTP GLLY+RQ
Sbjct: 296 YAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNINGTNVQRTPAGLLYVRQ 355

Query: 355 WDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVS 414
           W+NMQYVSTA+FLLTVY D+L+ +N  L+C  GT+TP E+  FAKSQ+DYILGSNPM  S
Sbjct: 356 WNNMQYVSTASFLLTVYSDHLRKSNTDLECHEGTVTPDEMLGFAKSQIDYILGSNPMETS 415

Query: 415 YLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDE 474
           YLVGYG K+P R+HHRG S  S+K+ +GFIGCTQGYD+W+ R +PNP+V+VGALVGGPD 
Sbjct: 416 YLVGYGPKYPTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGALVGGPDC 475

Query: 475 KDQFRDERSNFVQTEACTYNTATLVGVFAKLRRL 508
           +D F D R N+VQTEACTYNTA LVGVFA+L  L
Sbjct: 476 QDNFDDRRGNYVQTEACTYNTAPLVGVFARLIEL 509

Length = 525
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 523
PLN02340 614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02266510 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN03009495 cellulase 100.0
PLN02175484 endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.23
COG1331667 Highly conserved protein containing a thioredoxin 97.01
KOG2787403 consensus Lanthionine synthetase C-like protein 1 95.75
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.28
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.08
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 93.03
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 90.46
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 82.73
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 82.33
>PLN02340 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=6.2e-128  Score=1044.63  Aligned_cols=480  Identities=58%  Similarity=1.065  Sum_probs=445.0

Q ss_pred             HHHHhhhhhhhccCCchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchH
Q 036785           27 YMMALTLPLIVQCHDSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMA  106 (523)
Q Consensus        27 ~~~~~s~p~~~~~~~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~w~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a  106 (523)
                      ++.++..+.... ...++|.++|++||+||++||||.||++++++||++||+.||.+.++||+|||||||||+||++|+|
T Consensus        14 ~~~~~~~~~~~~-~~~~nY~~aL~~Sl~Fy~aQRsG~Lp~~~~~~WR~ds~l~Dg~~~~~DlsGGwyDAGD~vKf~~p~a   92 (614)
T PLN02340         14 LLLVLAAAASAA-AEAFNYGGALDKTLLFFEAQRSGKLPANQRVKWRGDSGLKDGFLQGVDLVGGYYDAGDHVKFGLPMA   92 (614)
T ss_pred             HHHHHHhhhccc-cCCCcHHHHHHHHHHHHHHhcCcCCCccCCCcccccccCCCcccccCCCCCCceeCCCcceecchhH
Confidence            333344444332 3378999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHchhhhhcCCCchHHHHHHHHHHHHHHHhccCCCeeEEEecCCCCCCCCCCCCCCCCcccceEEcCCCC
Q 036785          107 FTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERN  186 (523)
Q Consensus       107 ~t~~~L~~a~~ef~~~~es~~~~pdiLdE~kwg~Dwllkm~~~~g~~y~qVgd~~~dh~~w~~Pe~~~~~R~v~~~~~~~  186 (523)
                      +|+++|+|+++||++.++++|++||+||||||++|||+|||++++.||+||||+..||.+|++||+|+++|++|.++.++
T Consensus        93 ~t~t~L~w~~~ef~~~~~~~~~~~~~ldeirw~~Dyllk~~~~~~~~~~qVGdg~~DH~~W~~PE~~~~~R~~y~i~~~~  172 (614)
T PLN02340         93 FAVTMLSWGAVDFRKEITALNQMQRTLWAIRWGTDYFIKAHTQPNVLWGQVGDGDSDHYCWERAEDMTTPRTAYKLDQNH  172 (614)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcccccCCChhhcCCcCceeecCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCCcccHHHHHHHHHHHH
Q 036785          187 PGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKA  266 (523)
Q Consensus       187 p~t~~a~~~AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy~a  266 (523)
                      |+|++++++|||||+||||||++||+||++||+|||++|+||+++|+.|.++++...++|+| ++|.||++|||+|||+|
T Consensus       173 pgSd~a~e~AAAlAaas~vfk~~D~~YA~~lL~~Ak~ly~fA~~~~g~y~~s~~~a~~~Y~s-s~~~DEl~WAAawLy~A  251 (614)
T PLN02340        173 PGSDLAGETAAALAAASKAFKPYNSSYSDLLLVHAKQLFSFADKFRGLYDDSIQNAKKFYTS-SGYSDELLWAAAWLYRA  251 (614)
T ss_pred             CccHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCccccCCCC-CCcchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998777777889999 99999999999999999


Q ss_pred             cCcHHHHHHHHhhhhhhCCCCCccccccccchhHHHHHHHHhhcCccc---hHHHHHHHHHHHHHHHHHhhcCCCCCccc
Q 036785          267 TDNEAYLKYVLDNADRFGGITWAITEFSWDVKYAGVQIIASMVNNHKE---HEQVLERYGSKAEFYLCACLNKNNETNVD  343 (523)
Q Consensus       267 TG~~~Yl~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (523)
                      |||++|+++++.+...++...|....|+||+|.+|+++||++++.+..   ....++.|++.+|.++|.+++++++++++
T Consensus       252 Tgd~~Yl~~~~~~~~~~~~~~~~~~~f~WD~k~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~v~  331 (614)
T PLN02340        252 TGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGRGGAYTSTLKQYQAKADYFACACLQKNGGYNIQ  331 (614)
T ss_pred             hCCHHHHHHHHHHHHhcccccccCCcCCccchhhHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHhhhccCCCCccc
Confidence            999999999998765555555666679999999999999997654322   23456679999999999888877888999


Q ss_pred             cCCCCccccccCCcHHHHHHHHHHHHHHhhhhhhcccccccCCCCCChHHHHHHHHhcchhhccCCCCCcceEeeeCCCC
Q 036785          344 RTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKF  423 (523)
Q Consensus       344 ~tp~g~~~~~~wgs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~  423 (523)
                      +||+|+.|+.+|||+||+++++||+++|++++..+...+.|++......+|+++|++|||||||+||+++|||||||.|+
T Consensus       332 ~TpgGl~~~~~Wgn~rya~~aafl~~vyad~l~~~~~~~~c~~~~~~~~~y~~fA~sQidYiLG~NP~~~SYVVGyG~n~  411 (614)
T PLN02340        332 LTPGGLMYVREWNNLQYASSAAFLLAVYSDYLSAANAKLRCPDGLVQPQELLDFARSQADYILGKNPKGMSYMVGYGPKY  411 (614)
T ss_pred             cCCCceEEeCCCChHHHHHHHHHHHHHHHHHhhhcccccccCccccCHHHHHHHHHHhhHhhcCCCCCCCceEeccCCCC
Confidence            99999999999999999999999999999999877777889877778899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCccCCCCccccCCCccccccCCCCCCCccccccccCCCCCCCcccCCCccccccccccCchHHHHHHH
Q 036785          424 PQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFA  503 (523)
Q Consensus       424 p~~pHHR~s~~~~~~~~~~~~~c~~g~~~~~~~~~~n~~~~~GalvGGPn~~d~y~D~~~~y~~nEvaId~NA~lv~~la  503 (523)
                      |+|||||+++||++..++.+++|.+|+++|++++.|||++|+|+||||||..|+|.|+|++|++||||||||||||++||
T Consensus       412 P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~np~vL~GALVGGPd~~D~y~D~r~~y~~nEvAidyNAplvg~lA  491 (614)
T PLN02340        412 PIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGALVGGPDANDNFSDDRSNYEQTEPTLSGNAPLVGLFA  491 (614)
T ss_pred             CCccccccccCCccccccccccCcccccccccCCCCCCCCCCCceeeCCCCCCCCCccccccccccceeehhHHHHHHHH
Confidence            99999999999988888889999999988999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhh
Q 036785          504 KLRRL  508 (523)
Q Consensus       504 ~l~~~  508 (523)
                      +|...
T Consensus       492 ~L~~~  496 (614)
T PLN02340        492 KLQSA  496 (614)
T ss_pred             HHHhc
Confidence            99973

>PLN02420 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 4e-97
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 8e-86
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 4e-80
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 6e-77
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 5e-70
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 6e-70
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 4e-59
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 2e-53
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 5e-06
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  351 bits (901), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 265/469 (56%), Gaps = 41/469 (8%)
Query: 42  SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKF 101
           +++Y   L  SLL++E+QRSGRLP +Q+VTWR  S L D  +QG DL GGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61
Query: 102 GLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGD 161
           G PMA+T T+L+WG+I +    S AG      +A+KW TDYFIKAHT  +  + +VG GD
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121
Query: 162 TDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETXXXXXXXSIVFRKLNPHYSHLLLHHA 221
            DH  W RPEDMT +R AYK+D   PGSD+AGET       SIVFR ++  YS+ LL HA
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181
Query: 222 QQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNAD 281
           +QLF+F + YRGKY  SI   + +Y S   Y DEL+WAA WLY+AT++  YL       D
Sbjct: 182 RQLFDFANNYRGKYSDSITDARNFYASAD-YRDELVWAAAWLYRATNDNTYLNTAESLYD 240
Query: 282 RFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETN 341
            FG   W     +WD K +GVQ++ + + N + ++  ++ Y +    YL          N
Sbjct: 241 EFGLQNWG-GGLNWDSKVSGVQVLLAKLTNKQAYKDTVQSYVN----YLI--------NN 287
Query: 342 VDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQ 401
             +TP GLLYI  W  +++ + AAF++             L+     L+      FA++Q
Sbjct: 288 QQKTPKGLLYIDMWGTLRHAANAAFIM-------------LEAAELGLSASSYRQFAQTQ 334
Query: 402 VDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDW--FKRLDP 459
           +DY LG      S++ G+GS  P R HHR  S            C     DW  F   DP
Sbjct: 335 IDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAP-----ATC-----DWNTFNSPDP 382
Query: 460 NPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRL 508
           N +V+ GALVGGPD+ D + D+RS++V  E  T   A      A L  L
Sbjct: 383 NYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query523
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-180
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-179
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-177
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-177
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-169
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-168
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-150
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-145
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-134
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 1e-83
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
 Score =  512 bits (1321), Expect = e-180
 Identities = 198/467 (42%), Positives = 268/467 (57%), Gaps = 37/467 (7%)

Query: 42  SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKF 101
           +++Y   L  SLL++E+QRSGRLP +Q+VTWR  S L D  +QG DL GGY+DAGD VKF
Sbjct: 2   AYDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKF 61

Query: 102 GLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGD 161
           G PMA+T T+L+WG+I +    S AG      +A+KW TDYFIKAHT  +  + +VG GD
Sbjct: 62  GFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGD 121

Query: 162 TDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHA 221
            DH  W RPEDMT +R AYK+D   PGSD+AGETAAA+AAASIVFR ++  YS+ LL HA
Sbjct: 122 ADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHA 181

Query: 222 QQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNAD 281
           +QLF+F + YRGKY  SI   + +Y S + Y DEL+WAA WLY+AT++  YL       D
Sbjct: 182 RQLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYD 240

Query: 282 RFGGITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETN 341
            FG   W     +WD K +GVQ++ + + N        + Y    + Y+   +N     N
Sbjct: 241 EFGLQNWG-GGLNWDSKVSGVQVLLAKLTN-------KQAYKDTVQSYVNYLIN-----N 287

Query: 342 VDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQ 401
             +TP GLLYI  W  +++ + AAF++    +   S                   FA++Q
Sbjct: 288 QQKTPKGLLYIDMWGTLRHAANAAFIMLEAAELGLS-------------ASSYRQFAQTQ 334

Query: 402 VDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKRLDPNP 461
           +DY LG      S++ G+GS  P R HHR  S         +        + F   DPN 
Sbjct: 335 IDYALGDGGR--SFVCGFGSNPPTRPHHRSSSCPPAPATCDW--------NTFNSPDPNY 384

Query: 462 NVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRL 508
           +V+ GALVGGPD+ D + D+RS++V  E  T   A      A L  L
Sbjct: 385 HVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 96.63
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.4
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.63
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.59
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 94.09
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.53
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 92.38
1nc5_A373 Hypothetical protein YTER; structural genomics, he 92.38
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 90.34
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 90.1
1nc5_A373 Hypothetical protein YTER; structural genomics, he 89.11
3pmm_A382 Putative cytoplasmic protein; structural genomics, 88.5
3k11_A445 Putative glycosyl hydrolase; structural genomics, 88.47
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 87.08
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
Probab=100.00  E-value=3e-115  Score=931.60  Aligned_cols=441  Identities=40%  Similarity=0.733  Sum_probs=392.8

Q ss_pred             hccCCchhHHHHHHHHHhhhHHhcCCCC-CCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHH
Q 036785           37 VQCHDSFNYGDALSKSLLYFESQRSGRL-PHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWG  115 (523)
Q Consensus        37 ~~~~~~~~Y~~~l~~sl~ff~~QRsG~l-p~~~~~~w~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~t~~~L~~a  115 (523)
                      +.+..+++|.++|++||+||++||||.+ |+.+|++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+
T Consensus        18 ~~~~~~~~Y~~~l~~sl~ff~~QRsG~~vp~~~~~~Wr~~shl~Dg~~~~~DlsGGwyDAGD~~Ky~~~~a~t~~~L~w~   97 (466)
T 2xfg_A           18 PPATGAFNYGEALQKAIFFYECQRSGKLDSSTLRLNWRGDSGLDDGKDAGIDLTGGWYDAGDHVKFNLPMSYSAAMLGWA   97 (466)
T ss_dssp             ---CCSSCHHHHHHHHHHHHHHTBCBCCCTTTCSBSSCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccccccccccCCCCceeCCCCCeeccccHHHHHHHHHH
Confidence            3344479999999999999999999998 999999999999999999999999999999999999999999999999999


Q ss_pred             HHHchhhhhcCCCchHHHHHHHHHHHHHHHhccCCCeeEEEecCCCCCCCCCCCCCCCCcccceEEcCCCCCchhHHHHH
Q 036785          116 VIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGET  195 (523)
Q Consensus       116 ~~ef~~~~es~~~~pdiLdE~kwg~Dwllkm~~~~g~~y~qVgd~~~dh~~w~~Pe~~~~~R~v~~~~~~~p~t~~a~~~  195 (523)
                      ++||++.|+++|++||||||||||+|||||||+++|.||+|||++..||.+|++||+|+++|++|.++.++|+|++++++
T Consensus        98 ~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~  177 (466)
T 2xfg_A           98 VYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAET  177 (466)
T ss_dssp             HHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHH
T ss_pred             HHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999889999999999


Q ss_pred             HHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCCcccHHHHHHHHHHHHcCcHHHHHH
Q 036785          196 AAAMAAASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKY  275 (523)
Q Consensus       196 AAalA~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy~aTG~~~Yl~~  275 (523)
                      |||||+||||||++||+||++||++||++|+||+++|+.|.  .+..+++|+|++++.||++|||+|||+||||++|+++
T Consensus       178 AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~~~~~~~--~~~~~~~Y~s~s~~~DEl~WAAawLy~ATgd~~Yl~~  255 (466)
T 2xfg_A          178 SAALAIASIIFKKVDGEYSKECLKHAKELFEFADTTKSDDG--YTAANGFYNSWSGFYDELSWAAVWLYLATNDSSYLDK  255 (466)
T ss_dssp             HHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCTT--CCTTTTTSCCSSCSHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHhcCCcCC--CCccccccCCCCCCchHHHHHHHHHHHHhCCHHHHHH
Confidence            99999999999999999999999999999999999999884  3456799999899999999999999999999999999


Q ss_pred             HHhhhhhhCC----CCC-ccccccccchhHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHhhcCCCCCccccCCCCcc
Q 036785          276 VLDNADRFGG----ITW-AITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLL  350 (523)
Q Consensus       276 ~~~~~~~~~~----~~~-~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp~g~~  350 (523)
                      ++.++..++.    ..+ ..+.|+||+|..|+++||+++.....  ..++.++..++.++|    +..++++++||+|+.
T Consensus       256 a~~~~~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~tp~Gl~  329 (466)
T 2xfg_A          256 AESYSDKWGYEPQTNIPKYKWAQCWDDVTYGTYLLLARIKNDNG--KYKEAIERHLDWWTT----GYNGERITYTPKGLA  329 (466)
T ss_dssp             HHHTTTTSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHHHHCSSC--HHHHHHHHHHHHHTT----CBTTBCCCBCTTSCB
T ss_pred             HHHHHHHhccccccccccccCcCCcchhHHHHHHHHHHhcCCcH--HHHHHHHHHHHHHHh----ccCCCccccCCcccc
Confidence            9987654432    111 13579999999999999887654321  224455555554433    445678999999999


Q ss_pred             ccccCCcHHHHHHHHHHHHHHhhhhhhcccccccCCCCCChHHHHHHHHhcchhhccCCCCCcceEeeeCCCCCCCCCCC
Q 036785          351 YIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHR  430 (523)
Q Consensus       351 ~~~~wgs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR  430 (523)
                      |...|||++|++|.+||+++|++++.       |.  ...+++|+++|++|||||||+|  ++|||||||+|+|++||||
T Consensus       330 ~~~~Wgs~~~~~n~afl~~~y~~~~~-------~~--~~~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR  398 (466)
T 2xfg_A          330 WLDQWGSLRYATTTAFLACVYSDWEN-------GD--KEKAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHR  398 (466)
T ss_dssp             CCCSSSHHHHHHHHHHHHHHHHTCTT-------SC--HHHHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCH
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHhcC-------CC--cccHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCc
Confidence            99999999999999999999998742       21  1237899999999999999999  9999999999999999999


Q ss_pred             CCCCCCccCCCCccccCCCccccccCCCCCCCccccccccCCCCCCCcccCCCccccccccccCchHHHHHHHHHhhhcc
Q 036785          431 GGSTVSYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPDEKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYS  510 (523)
Q Consensus       431 ~s~~~~~~~~~~~~~c~~g~~~~~~~~~~n~~~~~GalvGGPn~~d~y~D~~~~y~~nEvaId~NA~lv~~la~l~~~~~  510 (523)
                      ++++|..              +.++.|.|||++|+|+||||||..|+|.|+|.+|++||||||||||||++||+|...++
T Consensus       399 ~ss~~~~--------------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g  464 (466)
T 2xfg_A          399 TAHGSWA--------------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYG  464 (466)
T ss_dssp             HHHTCSS--------------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred             hhccCcc--------------ccccCCCCCCCCCccceeeCCCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcC
Confidence            9987511              24567899999999999999999999999999999999999999999999999998775
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 523
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-175
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-167
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-164
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-156
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-121
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-118
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  500 bits (1289), Expect = e-175
 Identities = 182/475 (38%), Positives = 248/475 (52%), Gaps = 38/475 (8%)

Query: 42  SFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKF 101
           +FNY +AL KS+ ++E+QRSG+LP N RV+WR  SGL DG + G+DL GG+YDAGD+VKF
Sbjct: 3   AFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKF 62

Query: 102 GLPMAFTITMLSWGVIQYGGEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGD 161
           G PMAFT TML+WG I+       +G+  +  + ++W  DYFIKAH  P+VL+V+VGDGD
Sbjct: 63  GFPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGD 122

Query: 162 TDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMAAASIVFRKLNPHYSHLLLHHA 221
            DH  W   E M   R ++KVD   PGSDVA ETAAAMAA+SIVF   +P Y+  L+ HA
Sbjct: 123 ADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHA 182

Query: 222 QQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNAD 281
           +QL+ F D YRG Y   +     Y    SGY DEL+W A WLYKAT +++YL       D
Sbjct: 183 KQLYTFADTYRGVYSDCVPAGAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYEYD 241

Query: 282 RFG-----GITWAITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNK 336
                    +       +WD K  G  ++ +        E   ++Y   A  +L      
Sbjct: 242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLA-------KETGKQKYIDDANRWLDYWTVG 294

Query: 337 NNETNVDRTPGGLLYIRQWDNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFD 396
            N   V  +PGG+  +  W  ++Y +  AF+  VY   +                +   D
Sbjct: 295 VNGQRVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDPV----------RKQRYHD 344

Query: 397 FAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTVSYKQDQGFIGCTQGYDDWFKR 456
           FA  Q++Y LG NP   SY+VG+G+  P+  HHR                   + D    
Sbjct: 345 FAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHR--------------TAHGSWTDSIAS 390

Query: 457 LDPNPNVVVGALVGGPDEK-DQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYS 510
              N +V+ GALVGGP    D + D+R ++V  E  T   A      A L   Y 
Sbjct: 391 PAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG 445
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query523
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 92.84
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 92.28
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 90.95
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 85.67
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 82.1
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 81.65
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=3.5e-108  Score=879.10  Aligned_cols=438  Identities=41%  Similarity=0.728  Sum_probs=386.5

Q ss_pred             CchhHHHHHHHHHhhhHHhcCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCcccccchHHHHHHHHHHHHHch
Q 036785           41 DSFNYGDALSKSLLYFESQRSGRLPHNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITMLSWGVIQYG  120 (523)
Q Consensus        41 ~~~~Y~~~l~~sl~ff~~QRsG~lp~~~~~~w~~~s~l~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~t~~~L~~a~~ef~  120 (523)
                      ++.+|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++|+
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~   81 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHCh
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCchHHHHHHHHHHHHHHHhccCCCeeEEEecCCCCCCCCCCCCCCCCcccceEEcCCCCCchhHHHHHHHHHH
Q 036785          121 GEISDAGEYHHAIEAIKWGTDYFIKAHTHPHVLWVEVGDGDTDHYCWQRPEDMTTSRRAYKVDERNPGSDVAGETAAAMA  200 (523)
Q Consensus       121 ~~~es~~~~pdiLdE~kwg~Dwllkm~~~~g~~y~qVgd~~~dh~~w~~Pe~~~~~R~v~~~~~~~p~t~~a~~~AAalA  200 (523)
                      +.++++|++||||||+|||+|||+|||+++|.||+|||++..||.+|++|+.++.+|+.+.++.++|+|++++++|||||
T Consensus        82 ~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999988877899999999999999


Q ss_pred             HHhcccccCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccCCCCCcccHHHHHHHHHHHHcCcHHHHHHHHhhh
Q 036785          201 AASIVFRKLNPHYSHLLLHHAQQLFEFGDKYRGKYDSSIEVVKGYYPSVSGYMDELLWAAVWLYKATDNEAYLKYVLDNA  280 (523)
Q Consensus       201 ~As~vfk~~D~~yA~~~L~~A~~ay~~a~~~~~~y~~~~~~~~g~Y~s~~~~~De~~wAAaeLy~aTG~~~Yl~~~~~~~  280 (523)
                      +||||||++||+||++||++||++|+||+++|+.|.+..+....+|.+ +++.||++|||+|||++|||++|+++++...
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~-~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~  240 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSW-SGYQDELVWGAYWLYKATGDDSYLAKAEYEY  240 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCS-SCSHHHHHHHHHHHHHHHCCHHHHHHHHHHG
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCc-cccchHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence            999999999999999999999999999999999887655444445555 8899999999999999999999999998876


Q ss_pred             hhhCCCCC-----ccccccccchhHHHHHHHHhhcCccchHHHHHHHHHHHHHHHHHhhcCCCCCccccCCCCccccccC
Q 036785          281 DRFGGITW-----AITEFSWDVKYAGVQIIASMVNNHKEHEQVLERYGSKAEFYLCACLNKNNETNVDRTPGGLLYIRQW  355 (523)
Q Consensus       281 ~~~~~~~~-----~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tp~g~~~~~~w  355 (523)
                      ..+....+     ....++|+++..++.+++++....       ..+++.++.+++.+.........++++.++.|...|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W  313 (460)
T d1tf4a1         241 DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKETGK-------QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTW  313 (460)
T ss_dssp             GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHHCC-------HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSS
T ss_pred             hhcccccccccccccccccccchhHHHHHHHHHHhhh-------hHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCC
Confidence            43322111     134689999988887776643322       245555666666555544556778889999998999


Q ss_pred             CcHHHHHHHHHHHHHHhhhhhhcccccccCCCCCChHHHHHHHHhcchhhccCCCCCcceEeeeCCCCCCCCCCCCCCCC
Q 036785          356 DNMQYVSTAAFLLTVYGDYLQSTNQTLKCDRGTLTPRELFDFAKSQVDYILGSNPMAVSYLVGYGSKFPQRMHHRGGSTV  435 (523)
Q Consensus       356 gs~~~~~n~a~l~~~y~~~l~~~~~~~~~~~~~~~~~~y~~~a~~qldYiLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~  435 (523)
                      ||+++++|.+++++++++++.+.          +++++|+++|++|||||||+||+++|||||+|.|+|+|||||+++++
T Consensus       314 Gsn~~~~n~a~~~~~a~~~~~~~----------~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~  383 (460)
T d1tf4a1         314 GALRYAANTAFVALVYAKVIDDP----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS  383 (460)
T ss_dssp             SHHHHHHHHHHHHHHHHHHCCCH----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTC
T ss_pred             chHHHHHHHHHHHHHHHHHhccc----------CCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCC
Confidence            99999999999999998864321          24679999999999999999999999999999999999999998764


Q ss_pred             CccCCCCccccCCCccccccCCCCCCCccccccccCCC-CCCCcccCCCccccccccccCchHHHHHHHHHhhhcc
Q 036785          436 SYKQDQGFIGCTQGYDDWFKRLDPNPNVVVGALVGGPD-EKDQFRDERSNFVQTEACTYNTATLVGVFAKLRRLYS  510 (523)
Q Consensus       436 ~~~~~~~~~~c~~g~~~~~~~~~~n~~~~~GalvGGPn-~~d~y~D~~~~y~~nEvaId~NA~lv~~la~l~~~~~  510 (523)
                      .              .++...|.|||++++|+|||||| +.+||+|++++|++||||||||||||++||+|.+..+
T Consensus       384 ~--------------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~  445 (460)
T d1tf4a1         384 W--------------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG  445 (460)
T ss_dssp             S--------------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred             C--------------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence            1              12456788999999999999999 5899999999999999999999999999999998765
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure