Citrus Sinensis ID: 036820

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-

MDLVMGSSSFKQPLLHFPSSSSSFYSQSSLLLCTNNARTKRRNRLSAMASMRPGDPKDNIFTRRKTILLVGISVLPLLNLRARALDGLAPRSGVLGALYALTQNEKKATDATLEYMKARLKEKEAAIVSLEKDFESKLQNEQEQRTKQLKSAKEEQQLLMNKLNSANTTISGLGKELQNEKRFIEELRIEIDSLQTSLLKFGEDKRTLEEERKQKLDRIEGLQDKINLLSLELREKDDGVQKLSSSLQQKETELKNLNSVYKQNELNARASSLLVERDDSKQKLEAVQKEYKELKLSSENETASNAKRLREKKEELHQLKEKLELTLDEACENRATIAKFTQEKDDLRKMLDNELGNVKNLKYELQITQETLETTRNEASDLEKQLKQSKDSCADLETEISRIRAEFAEVKHTLGNSLDEAKRSGEVLAGELFAAKEVLKKASEELQNVSHELEATAENRDSLRKELVNIYKKAEATANDLKEQKEIVSSLNKELQALEKQTSKDKEARKSLETDLEEATKSLDEMNRNALELSKNLEKANSQISNLEDEKAVLYKSLTEQKSIANESRENMEDAHNLVMRLGQERKSLDKRSKKLEEELASAKGEILRLRSQINSSKTLVNDENPRKVEDDNKVPVTAKKTTRRRKSNSQ

cccccccccccccccccccccccccccccHcccccHHHHHHHcHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHccc

***********************************************************IFTRRKTILLVGISVLPLLNLRARALDGLAPRSGVLGALYALTQNE******TLEY******************************************************************RFIEELRIEIDSLQTSLL***********************************************************************************************************************************C***ATIAKF**************LGNVKNLKYELQI*************************************************************AGELFA*************************************************************************************************************************************************************************************************************************

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MDLVMGSSSFKQPLLHFPSSSSSFYSQSSLLLCTNNARTKRRNRLSAMASMRPGDPKDNIFTRRKTILLVGISVLPLLNLRARALDGLAPRSGVLGALYALTQNEKKATDATxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxISGLGKExxxxxxxxxxxxxxxxxxxxxLLKFGEDxxxxxxxxxxxxxxxxxxxxxxxxxxxxLREKDDGxxxxxxxxxxxxxxxxxxxxxxxxxxxxARxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxNxxxxxxxxxxxxxxxxxxxxxxxxxxxxRATxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLGNSLDEAKRSGEVLAGExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHNLxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxINSSKTLVNDENPRKVEDDNKVPVTAKKTTRRRKSNSQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
MAR-binding filament-like protein 1	Binds DNA. Interacts with chromatin via matrix attachment regions (MARs). Likely to participate in nuclear architecture by connecting chromatin with the nuclear matrix and potentially with the nuclear envelope.	probable	Q9LW85

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 348-414
View the alignment between query and template
View the model in PyMOL

Template: 1I84, chain S
Confidence level:very confident
Coverage over the Query: 312-375
View the alignment between query and template
View the model in PyMOL

Template: 2EFR, chain A
Confidence level:confident
Coverage over the Query: 375-468
View the alignment between query and template
View the model in PyMOL

Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 157-314
View the alignment between query and template
View the model in PyMOL

Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 351-419,431-478
View the alignment between query and template
View the model in PyMOL

Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 133-255
View the alignment between query and template
View the model in PyMOL

Template: 3OJA, chain B
Confidence level:probable
Coverage over the Query: 102-209
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
3vkg, chain A		confident	Alignment \| Template Structure