Citrus Sinensis ID: 036844
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | 2.2.26 [Sep-21-2011] | |||||||
| P51090 | 393 | Chalcone synthase OS=Viti | yes | no | 0.969 | 0.961 | 0.669 | 1e-146 | |
| Q9XJ57 | 391 | Chalcone synthase 2 OS=Ci | no | no | 0.982 | 0.979 | 0.647 | 1e-144 | |
| P16107 | 398 | Chalcone synthase OS=Petr | N/A | no | 0.987 | 0.967 | 0.644 | 1e-144 | |
| P24825 | 400 | Chalcone synthase C2 OS=Z | N/A | no | 0.982 | 0.957 | 0.634 | 1e-143 | |
| Q2R3A1 | 398 | Chalcone synthase 1 OS=Or | yes | no | 0.982 | 0.962 | 0.626 | 1e-143 | |
| P48385 | 398 | Chalcone synthase OS=Call | N/A | no | 0.982 | 0.962 | 0.634 | 1e-143 | |
| Q9ZS40 | 397 | Chalcone synthase 2 OS=Da | N/A | no | 0.987 | 0.969 | 0.636 | 1e-143 | |
| A2ZEX7 | 398 | Chalcone synthase 1 OS=Or | N/A | no | 0.982 | 0.962 | 0.624 | 1e-143 | |
| Q9SBL5 | 401 | Chalcone synthase 4 OS=So | N/A | no | 0.982 | 0.955 | 0.629 | 1e-142 | |
| Q9SBL3 | 401 | Chalcone synthase 6 OS=So | N/A | no | 0.982 | 0.955 | 0.629 | 1e-142 |
| >sp|P51090|CHSY_VITVI Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 299/381 (78%), Gaps = 3/381 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + E LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIELPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K +TGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLTVETVVL S
Sbjct: 366 EWGVLFGFGPGLTVETVVLHS 386
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Vitis vinifera (taxid: 29760) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|Q9XJ57|CHS2_CITSI Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/386 (64%), Positives = 300/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
+++ QR AT+LA+GTATP + QADYPD+YFR T SEH TELKEKFKR+C++ I
Sbjct: 7 IRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIK 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY +LTEEILKENPNMC Y APSLDARQ +++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
LIF GVDMPGAD +L KL+GL+PSV R M+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F P++THLD LV QA+FGDGA A I+GA PD S ER L+Q++S +QT
Sbjct: 187 LVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAAVIVGADPDTSV-ERPLYQLVSTSQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K LS A +P+GISDWNS+F++ HPG
Sbjct: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPLGISDWNSIFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL +KL A+R VL EYGN+ +A V FILDE+RKKS EE KATTGEGL
Sbjct: 306 GPAILDQVESKLGLKGEKLKATRQVLSEYGNMSSACVLFILDEMRKKSVEEAKATTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 366 DWGVLFGFGPGLTVETVVLHSVPIKA 391
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Citrus sinensis (taxid: 2711) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P16107|CHSY_PETCR Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1 | Back alignment and function description |
|---|
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/388 (64%), Positives = 299/388 (77%), Gaps = 3/388 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
+++ QR A ILA+GTATP NC YQADYPD+YFR TNSEH T+LK KFKR+CE+ I
Sbjct: 12 IRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIR 71
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY H+TEE LKENPN+C Y APSLDARQ +++ EVP+LGKEAA KAIKEWGQ SKITH
Sbjct: 72 KRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQPKSKITH 131
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
LIF GVDMPGAD +L KLLGL+PSV R M+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 132 LIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGARV 191
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS++HLD LV QA+FGDGA A I+G+ PD+S ER LFQ++S QT
Sbjct: 192 LVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVILGSDPDLSV-ERPLFQLISAAQT 250
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K L A PIGISDWNSLF++ HPG
Sbjct: 251 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPG 310
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++K+ A+R VL +YGN+ +A V FILDE+RKKS EE KATTGEGL
Sbjct: 311 GPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGEGL 370
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDSTN 389
D GVLFG GPGLTVETVVL S P T+
Sbjct: 371 DWGVLFGFGPGLTVETVVLHSVPATFTH 398
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Petroselinum crispum (taxid: 4043) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P24825|CHS2_MAIZE Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 509 bits (1312), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/386 (63%), Positives = 298/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC YQADYPD+YFR T SEH T+LKEKFKR+C++ I
Sbjct: 11 VRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIR 70
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEE L ENP+MC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ S+ITH
Sbjct: 71 KRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITH 130
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K LGL+PSVNRLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 131 LVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 190
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PSE+HLD LV QA+FGDGA A ++GA PD ER LFQ++S QT
Sbjct: 191 LVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVVVGADPD-DRVERPLFQLVSAAQT 249
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K IG+ L +A P+GISDWNS+F+V HPG
Sbjct: 250 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIGRALDDAFKPLGISDWNSIFWVAHPG 309
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K ++ A+R+VL EYGN+ +A V FILDE+RK+S E+ +ATTGEGL
Sbjct: 310 GPAILDQVEAKVGLDKARMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGL 369
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 370 DWGVLFGFGPGLTVETVVLHSVPITT 395
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Zea mays (taxid: 4577) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q2R3A1|CHS1_ORYSJ Chalcone synthase 1 OS=Oryza sativa subsp. japonica GN=CHS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/386 (62%), Positives = 300/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC YQADYPD+YFR T SEH ELKEKFKR+C++ I
Sbjct: 10 VRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIR 69
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEIL+ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ S+ITH
Sbjct: 70 KRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITH 129
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K+LGL+P+VNRLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 130 LVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 189
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
L VCS+I + F PSE+HLD +V QA+FGDGA A I+G+ PD ER LFQ++S +QT
Sbjct: 190 LAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPD-EAVERPLFQMVSASQT 248
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I + L +A +P+GISDWNS+F+V HPG
Sbjct: 249 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNSIFWVAHPG 308
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K+++ A+R+VL EYGN+ +A V FILDE+RK+S E+ ATTGEG+
Sbjct: 309 GPAILDQVEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGM 368
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 369 DWGVLFGFGPGLTVETVVLHSVPITA 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P48385|CHSY_CALCH Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2 | Back alignment and function description |
|---|
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/386 (63%), Positives = 299/386 (77%), Gaps = 3/386 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
+ ++ QR ATILA+GTATP NC YQADYPD+YFR T SEH +LKEKFKR+C++
Sbjct: 7 IAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKS 66
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I KRY HLTEE LKENP++C Y APSLDARQ +++ EVPKLGKEAA KAIKEWGQ SK
Sbjct: 67 MIRKRYMHLTEEYLKENPSLCEYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQPKSK 126
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLIF GVDMPGAD +L KLLGL+PSV R M+Y QGC+ GGTV+RLAKD+AENN G
Sbjct: 127 ITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKG 186
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC 238
ARVLVVCS+I + F P++THLD LV QA+FGDGA A I+GA PD++ ER LF+++S
Sbjct: 187 ARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGADPDLTT-ERPLFEMISA 245
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT +PD+E I G L+E+G+ HL DVP I K I K L+ A SP+GI+DWNS+F++
Sbjct: 246 AQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALTQAFSPLGITDWNSIFWIA 305
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE LGL ++K+ A+R+VL EYGN+ +A V FI+DE+RKKS E+ ATTG
Sbjct: 306 HPGGPAILDQVELKLGLKEEKMRATRHVLSEYGNMSSACVLFIIDEMRKKSAEDGAATTG 365
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFP 384
EGLD GVLFG GPGLTVETVVL S P
Sbjct: 366 EGLDWGVLFGFGPGLTVETVVLHSLP 391
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Callistephus chinensis (taxid: 13379) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9ZS40|CHS2_DAUCA Chalcone synthase 2 OS=Daucus carota GN=CHS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/388 (63%), Positives = 297/388 (76%), Gaps = 3/388 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR A ILA+GTATP NC YQADYPD+YFR TNSEH ++LK KFKR+CE+ I
Sbjct: 11 IRKRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMSDLKLKFKRMCEKSMIR 70
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY H+TEE LKENPN+C Y APSLDARQ +++ EVP+LGKEAA KAIKEWG SKITH
Sbjct: 71 KRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAAAKAIKEWGHPKSKITH 130
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
LIF GVDMPGAD +L KLLGL+PSV R M+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 131 LIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNTGARV 190
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS++HLD LV QA+FGDGA A I+G+ PD+S ER LFQ++S QT
Sbjct: 191 LVVCSEITAVTFRGPSDSHLDSLVGQALFGDGAAAVIVGSDPDLSV-ERPLFQLISAAQT 249
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K L A PIGISDWNSLF++ HPG
Sbjct: 250 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFGPIGISDWNSLFWIAHPG 309
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++K+ A+R VL +YGN+ +A V FILDE+RKKS EE KATTG+GL
Sbjct: 310 GPAILDQVELKLGLKEEKMRATRQVLSDYGNMSSACVLFILDEMRKKSIEEGKATTGDGL 369
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDSTN 389
D GVLFG GPGLTVETVVL S P T+
Sbjct: 370 DWGVLFGFGPGLTVETVVLHSVPATITH 397
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Daucus carota (taxid: 4039) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|A2ZEX7|CHS1_ORYSI Chalcone synthase 1 OS=Oryza sativa subsp. indica GN=CHS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/386 (62%), Positives = 300/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC YQADYPD+YFR T SEH ELKEKFKR+C++ I
Sbjct: 10 VRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIR 69
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEIL+ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ S+ITH
Sbjct: 70 KRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITH 129
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K+LGL+P+V+RLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 130 LVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 189
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
L VCS+I + F PSE+HLD +V QA+FGDGA A I+G+ PD ER LFQ++S +QT
Sbjct: 190 LAVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPD-EAVERPLFQMVSASQT 248
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I + L +A +P+GISDWNS+F+V HPG
Sbjct: 249 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNSIFWVAHPG 308
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K+++ A+R+VL EYGN+ +A V FILDE+RK+S E+ ATTGEG+
Sbjct: 309 GPAILDQVEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGM 368
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 369 DWGVLFGFGPGLTVETVVLHSVPITA 394
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Oryza sativa subsp. indica (taxid: 39946) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9SBL5|CHS4_SORBI Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/386 (62%), Positives = 298/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC +QADYPD+YFR T SEH TELKEKFKR+C++ I
Sbjct: 11 VRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIR 70
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEE L ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ SKITH
Sbjct: 71 KRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITH 130
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K+LGL+PSV RLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 131 LVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 190
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PSE+HLD +V QA+FGDGA A I+GA PD ER LFQ++S +QT
Sbjct: 191 LVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQT 249
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I + L A P+GI+D+NS+F+V HPG
Sbjct: 250 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPG 309
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K+++ A+R+VL EYGN+ +A V FILDE+RK+S E+ +ATTGEGL
Sbjct: 310 GPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGL 369
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 370 DWGVLFGFGPGLTVETVVLHSVPITT 395
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Sorghum bicolor (taxid: 4558) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9SBL3|CHS6_SORBI Chalcone synthase 6 OS=Sorghum bicolor GN=CHS6 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1303), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/386 (62%), Positives = 298/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC +QADYPD+YFR T SEH TELKEKFKR+C++ I
Sbjct: 11 VRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIR 70
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEE L ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ SKITH
Sbjct: 71 KRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITH 130
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K+LGL+PSVNRLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 131 LVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 190
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PSE+HLD +V QA+FGDGA A I+GA PD ER LFQ++S +QT
Sbjct: 191 LVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQT 249
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I + L A P+GI+D+NS+F+V HPG
Sbjct: 250 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPG 309
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K+++ A+R+VL EYGN+ +A V FILDE+RK+S E+ +ATTGEG
Sbjct: 310 GPAILDQVEAKVGLKKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGF 369
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 370 DWGVLFGFGPGLTVETVVLHSVPITT 395
|
The primary product of this enzyme is 4,2',4',6'-tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin. Sorghum bicolor (taxid: 4558) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| 18376655 | 393 | chalcone synthase [Vitis vinifera] | 0.987 | 0.979 | 0.670 | 1e-148 | |
| 3288721 | 393 | chalcone synthase [Vitis vinifera] | 0.969 | 0.961 | 0.674 | 1e-146 | |
| 239949924 | 393 | CHS4 [Vitis labrusca x Vitis vinifera] | 0.969 | 0.961 | 0.669 | 1e-146 | |
| 225451637 | 393 | PREDICTED: chalcone synthase [Vitis vini | 0.969 | 0.961 | 0.671 | 1e-146 | |
| 223953610 | 393 | chalcone synthase [Vitis rotundifolia] | 0.987 | 0.979 | 0.659 | 1e-145 | |
| 1705846 | 393 | RecName: Full=Chalcone synthase; AltName | 0.969 | 0.961 | 0.669 | 1e-145 | |
| 393793976 | 392 | chalcone synthase C [Lilium hybrid divis | 0.976 | 0.971 | 0.648 | 1e-144 | |
| 225451639 | 454 | PREDICTED: LOW QUALITY PROTEIN: chalcone | 0.982 | 0.843 | 0.659 | 1e-143 | |
| 2465406 | 454 | chalcone synthase [Vitis vinifera] | 0.982 | 0.843 | 0.659 | 1e-143 | |
| 444475577 | 393 | chalcone synthase [Lonicera japonica] | 0.974 | 0.966 | 0.660 | 1e-143 |
| >gi|18376655|dbj|BAB84112.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 530 bits (1364), Expect = e-148, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 304/388 (78%), Gaps = 3/388 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ +QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKSQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K TTGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDSTN 389
+ GVLFG GPGLTVETVVL S ST+
Sbjct: 366 EWGVLFGFGPGLTVETVVLHSLATQSTH 393
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|3288721|dbj|BAA31259.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 525 bits (1353), Expect = e-146, Method: Compositional matrix adjust.
Identities = 257/381 (67%), Positives = 302/381 (79%), Gaps = 3/381 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE KA+TGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKASTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLTVETVVL S
Sbjct: 366 EWGVLFGFGPGLTVETVVLHS 386
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|239949924|gb|ACS36661.1| CHS4 [Vitis labrusca x Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 301/381 (79%), Gaps = 3/381 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVC +I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCPEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE KA+TGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKASTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLT+ETVVL S
Sbjct: 366 EWGVLFGFGPGLTIETVVLHS 386
|
Source: Vitis labrusca x Vitis vinifera Species: Vitis labrusca x Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451637|ref|XP_002276946.1| PREDICTED: chalcone synthase [Vitis vinifera] gi|122893266|gb|ABM67586.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust.
Identities = 256/381 (67%), Positives = 300/381 (78%), Gaps = 3/381 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K +TGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLTVETVVL S
Sbjct: 366 EWGVLFGFGPGLTVETVVLHS 386
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|223953610|gb|ACN30003.1| chalcone synthase [Vitis rotundifolia] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 303/388 (78%), Gaps = 3/388 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V++ QR AT++A+GTATPPNC Q+ YPD+YFR TNSEHKTELKEKFKR+C++ I
Sbjct: 7 VRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIK 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFNPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K TTGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDSTN 389
+ GVLFG GPGLTVETVVL S ST+
Sbjct: 366 EWGVLFGFGPGLTVETVVLHSLATQSTH 393
|
Source: Vitis rotundifolia Species: Vitis rotundifolia Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1705846|sp|P51090.1|CHSY_VITVI RecName: Full=Chalcone synthase; AltName: Full=Naringenin-chalcone synthase gi|499038|emb|CAA53583.1| chalcone synthase [Vitis vinifera] gi|295814493|gb|ADG35962.1| chalcone synthase [Vitis hybrid cultivar] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust.
Identities = 255/381 (66%), Positives = 299/381 (78%), Gaps = 3/381 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+CE+ IN
Sbjct: 7 IRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + E LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIELPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A +PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFTPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K +TGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGSTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLTVETVVL S
Sbjct: 366 EWGVLFGFGPGLTVETVVLHS 386
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|393793976|dbj|BAM28981.1| chalcone synthase C [Lilium hybrid division I] | Back alignment and taxonomy information |
|---|
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/384 (64%), Positives = 302/384 (78%), Gaps = 3/384 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ +QR AT+LA+GTATP N YQ++YPD+YFR T SEH TELKEKFKR+C++ I
Sbjct: 7 IRQSQRAEGPATVLAIGTATPANMIYQSEYPDYYFRITKSEHMTELKEKFKRMCDKSMIR 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HL EEIL ENPNMC Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLNEEILTENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGL+PSVNRLM+Y QGC+ GGTV+RLAKD+AENN ARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLRPSVNRLMMYQQGCFAGGTVLRLAKDLAENNKSARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F P+++HLD LV QA+FGDGA A IIGA PD++ ER LFQ++S +QT
Sbjct: 187 LVVCSEITAVTFRGPNDSHLDSLVGQALFGDGAAAIIIGADPDLAV-ERPLFQLVSASQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L+ A P+GISDWNS+F++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLTGAFQPLGISDWNSIFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE+ L L K+K+ A+R+VL EYGN+ +A V FILDE+RKKS EE KATTGEGL
Sbjct: 306 GPAILDQVEERLALRKEKMKATRHVLSEYGNMSSACVLFILDEMRKKSVEEGKATTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPI 385
+ GVLFG GPGLTVETVVL S PI
Sbjct: 366 EWGVLFGFGPGLTVETVVLHSLPI 389
|
Source: Lilium hybrid division I Species: Lilium hybrid cultivar Genus: Lilium Family: Liliaceae Order: Liliales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225451639|ref|XP_002276921.1| PREDICTED: LOW QUALITY PROTEIN: chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 302/388 (77%), Gaps = 5/388 (1%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ +QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+C++ IN
Sbjct: 7 IRKSQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HL EEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLNEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K TTGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS--FPIDS 387
+ GVLFG GPGLTVETV + + IDS
Sbjct: 366 EWGVLFGFGPGLTVETVXVAQPCYTIDS 393
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|2465406|gb|AAB72091.1| chalcone synthase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 256/388 (65%), Positives = 302/388 (77%), Gaps = 5/388 (1%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ +QR AT+LA+GTATP NC YQADYPD+YFR TNSEH TELKEKFKR+C++ IN
Sbjct: 7 IRKSQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIN 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HL EEILKENPN+C Y APSLDARQ M++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMHLNEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F G DMPGAD +L KLLGLKPSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGCDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD + ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPD-TKIERPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I K L A PIGISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFKPIGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL A+R+VL EYGN+ +A V FILDE+RKKS EE K TTGEGL
Sbjct: 306 GPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSIEEGKGTTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS--FPIDS 387
+ GVLFG GPGLTVETVV+ + IDS
Sbjct: 366 EWGVLFGFGPGLTVETVVVAQPCYTIDS 393
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|444475577|gb|AGE10597.1| chalcone synthase [Lonicera japonica] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 253/383 (66%), Positives = 297/383 (77%), Gaps = 3/383 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR AT+LA+GTATP NC YQADYPDFYFR T SEHK ELKEKFKR+CE+ I
Sbjct: 9 IRKAQRAQGPATVLAIGTATPANCVYQADYPDFYFRITKSEHKAELKEKFKRMCEKSMIR 68
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HL EEILKENP +C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 69 KRYMHLNEEILKENPGICEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITH 128
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 129 LVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGARV 188
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD S ER LF+++S QT
Sbjct: 189 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDKSV-ERPLFELVSAAQT 247
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K L A +PIGI+DWNSLF++ HPG
Sbjct: 248 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLKEAFAPIGITDWNSLFWIAHPG 307
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE LGL ++KL +R+VL EYGN+ +A V FILDE+RKKS EE KATTG+GL
Sbjct: 308 GPAILDQVEIKLGLKEEKLRPTRHVLSEYGNMSSACVLFILDELRKKSIEEGKATTGDGL 367
Query: 362 DCGVLFGCGPGLTVETVVLQSFP 384
+ GVLFG GPGLTVETVVL S P
Sbjct: 368 EWGVLFGFGPGLTVETVVLHSVP 390
|
Source: Lonicera japonica Species: Lonicera japonica Genus: Lonicera Family: Caprifoliaceae Order: Dipsacales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 390 | ||||||
| UNIPROTKB|Q8RVK9 | 389 | CHS "Naringenin-chalcone synth | 0.956 | 0.958 | 0.628 | 1.5e-124 | |
| UNIPROTKB|Q9FUB7 | 390 | Q9FUB7 "Chalcone synthase" [Hy | 0.979 | 0.979 | 0.607 | 4.4e-123 | |
| TAIR|locus:2159098 | 395 | TT4 "TRANSPARENT TESTA 4" [Ara | 0.958 | 0.946 | 0.609 | 1.7e-121 | |
| UNIPROTKB|P30074 | 389 | CHS2 "Chalcone synthase 2" [Me | 0.984 | 0.987 | 0.583 | 3.8e-117 | |
| UNIPROTKB|Q27Z07 | 390 | BIS "Biphenyl synthase" [Sorbu | 0.969 | 0.969 | 0.581 | 9.4e-114 | |
| UNIPROTKB|D2DRC4 | 390 | BIS2 "Biphenyl synthase 2" [So | 0.971 | 0.971 | 0.582 | 8.4e-113 | |
| UNIPROTKB|D2DRC5 | 388 | BIS3 "Biphenyl synthase 3" [So | 0.976 | 0.981 | 0.557 | 8.7e-111 | |
| UNIPROTKB|Q8SAS8 | 395 | Q8SAS8 "Trihydroxybenzophenone | 0.958 | 0.946 | 0.561 | 2.1e-109 | |
| UNIPROTKB|Q8LIL0 | 402 | LOC_Os07g17010 "Curcuminoid sy | 0.941 | 0.912 | 0.448 | 1e-82 | |
| TAIR|locus:2116845 | 392 | LAP5 "LESS ADHESIVE POLLEN 5" | 0.966 | 0.961 | 0.342 | 4.6e-57 |
| UNIPROTKB|Q8RVK9 CHS "Naringenin-chalcone synthase" [Cannabis sativa (taxid:3483)] | Back alignment and assigned GO terms |
|---|
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 235/374 (62%), Positives = 284/374 (75%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATI+A+GTATP NC Q++YPD+YFR TNSEHKTELKEKFKR+C++ I KRY HLTEEI
Sbjct: 17 ATIMAIGTATPANCVLQSEYPDYYFRITNSEHKTELKEKFKRMCDKSMIRKRYMHLTEEI 76
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENPN+C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITHL+F GVD
Sbjct: 77 LKENPNLCAYEAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVD 136
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+I +
Sbjct: 137 MPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAV 196
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F P++THLD LV QA+FGD P I E+ +F+++S QT +PD++ I
Sbjct: 197 TFRGPNDTHLDSLVGQALFGDGSAALIVGSDP-IPEVEKPIFELVSAAQTILPDSDGAID 255
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E+G+ HL DVP I K I K L+ A P+GISDWNSLF++ HPGG ++DQVE
Sbjct: 256 GHLREVGLTFHLLKDVPGLISKNIEKSLNEAFKPLGISDWNSLFWIAHPGGPAILDQVES 315
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L +KL A+R+VL EYGN+ +A V FILDE+R+K E+ TTGEGL+ GVLFG GP
Sbjct: 316 KLALKTEKLRATRHVLSEYGNMSSACVLFILDEMRRKCVEDGLNTTGEGLEWGVLFGFGP 375
Query: 372 GLTVETVVLQSFPI 385
GLTVETVVL S I
Sbjct: 376 GLTVETVVLHSVAI 389
|
|
| UNIPROTKB|Q9FUB7 Q9FUB7 "Chalcone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1210 (431.0 bits), Expect = 4.4e-123, P = 4.4e-123
Identities = 234/385 (60%), Positives = 288/385 (74%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT++A+GTA PPNC QA YPD+YFR TNSEHK ELKEKF+R+C++ I
Sbjct: 7 VRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIK 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY +L EE+LKENPNMC Y APSLDARQ +++ EVPKLGKEAA+KAIKEWGQ SKITH
Sbjct: 67 KRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGL+PSV RLM+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQT 241
LVVCS+I + F P++THLD LV QA+FGD P I E+ LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAIIIGSDP-IPEVEKPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K + K L+ A P+GISDWNSLF++ HPG
Sbjct: 246 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE L L +KL A+R+VL EYGN+ +A V FILDE+R+KS E+ TTGEG+
Sbjct: 306 GPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGI 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPID 386
+ GVLFG GPGLTVETVVL S I+
Sbjct: 366 EWGVLFGFGPGLTVETVVLHSVAIN 390
|
|
| TAIR|locus:2159098 TT4 "TRANSPARENT TESTA 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 228/374 (60%), Positives = 283/374 (75%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A ILA+GTA P N QA+YPD+YFR TNSEH T+LKEKFKR+C++ I KR+ HLTEE
Sbjct: 22 AGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEF 81
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENP+MC Y APSLD RQ +++ EVPKLGKEAA+KAIKEWGQ SKITH++F GVD
Sbjct: 82 LKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVD 141
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLLGL+PSV RLM+Y QGC+ GGTV+R+AKD+AENN GARVLVVCS+I +
Sbjct: 142 MPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAV 201
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PS+THLD LV QA+F D PD S E+ +F+++S QT +PD++ I
Sbjct: 202 TFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAID 261
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E+G+ HL DVP I K I K L A P+GISDWNSLF++ HPGG ++DQVE
Sbjct: 262 GHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQVEI 321
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
LGL ++K+ A+R+VL EYGN+ +A V FILDE+R+KS ++ ATTGEGL+ GVLFG GP
Sbjct: 322 KLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLEWGVLFGFGP 381
Query: 372 GLTVETVVLQSFPI 385
GLTVETVVL S P+
Sbjct: 382 GLTVETVVLHSVPL 395
|
|
| UNIPROTKB|P30074 CHS2 "Chalcone synthase 2" [Medicago sativa (taxid:3879)] | Back alignment and assigned GO terms |
|---|
Score = 1154 (411.3 bits), Expect = 3.8e-117, P = 3.8e-117
Identities = 226/387 (58%), Positives = 283/387 (73%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSC 238
ARVLVVCS++ + F PS+THLD LV QA+FGD P + E+ +F+++
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDP-VPEIEKPIFEMVWT 242
Query: 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL 298
QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+NS+F++
Sbjct: 243 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 302
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS + TTG
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 362
Query: 359 EGLDCGVLFGCGPGLTVETVVLQSFPI 385
EGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 363 EGLEWGVLFGFGPGLTIETVVLRSVAI 389
|
|
| UNIPROTKB|Q27Z07 BIS "Biphenyl synthase" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 222/382 (58%), Positives = 278/382 (72%)
Query: 4 VKSNQRPA-ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINK 62
VK++ P A ILA+GTA PPN +YQ DYPDF FR T +EH+T+L+EKF RICE+ K
Sbjct: 5 VKNHGEPQHAKILAIGTANPPNVYYQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTRK 64
Query: 63 RYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHL 122
RY HLTEEILK NP++ Y APSLD RQ ML EVPKLG++AALKAIKEWGQ +SKITHL
Sbjct: 65 RYLHLTEEILKANPSIYTYGAPSLDVRQDMLNSEVPKLGQQAALKAIKEWGQPISKITHL 124
Query: 123 IFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVL 182
IF VDMPGAD +LVKLLGL PSV R MIY GCY G TV+RLAKD AENN GARVL
Sbjct: 125 IFCTASCVDMPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARVL 184
Query: 183 VVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTT 242
VVC++I + FH ++THLD+LV QA+F D P+ ER LF++++C QT
Sbjct: 185 VVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPE-PKIERPLFEIVACRQTI 243
Query: 243 IPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI-GIS-DWNSLFYVLHP 300
IP++E+ + ++EMG +LS +VP +G + L+ + G + DWNSLF+ +HP
Sbjct: 244 IPNSEHGVVANIREMGFTYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVHP 303
Query: 301 GGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEG 360
GG ++DQVE+ LGL + KL A+R+VL EYGN+GA SV FILD++RKKS EE K+TTGEG
Sbjct: 304 GGPAIVDQVEEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDDMRKKSIEEGKSTTGEG 363
Query: 361 LDCGVLFGCGPGLTVETVVLQS 382
L+ GV+ G GPGLTVET VL+S
Sbjct: 364 LEWGVVIGIGPGLTVETAVLRS 385
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| UNIPROTKB|D2DRC4 BIS2 "Biphenyl synthase 2" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 223/383 (58%), Positives = 275/383 (71%)
Query: 3 TVKSNQRPA-ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
+VK P A ILA+GTA PPN +YQ DYPDF FR T +EH+T+L+EKF RICE+
Sbjct: 4 SVKDQVEPQHAKILAIGTANPPNVYYQEDYPDFLFRVTKNEHRTDLREKFDRICEKSRTR 63
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY +LTEEILK NP + Y APSLD RQ ML EVPKLG+EAALKAIKEWGQ +SKITH
Sbjct: 64 KRYLYLTEEILKANPCIYTYGAPSLDVRQDMLNPEVPKLGQEAALKAIKEWGQPISKITH 123
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
LIF VDMPGAD +LVKLLGL PSV R MIY GCY G TV+RLAKD AENN GARV
Sbjct: 124 LIFCTASCVDMPGADFQLVKLLGLNPSVTRTMIYEAGCYAGATVLRLAKDFAENNEGARV 183
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQT 241
LVVC++I + FH ++THLD+LV QA+F D P+ E LF++++C QT
Sbjct: 184 LVVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPE-PEIESPLFEIVACRQT 242
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI-GIS-DWNSLFYVLH 299
IP++E+ + ++EMG +LS +VP +G + L+ + G + DWNSLF+ +H
Sbjct: 243 IIPNSEHGVVANIREMGFNYYLSGEVPKFVGGNVVDFLTKTFEKVDGKNKDWNSLFFSVH 302
Query: 300 PGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGE 359
PGG ++DQVE+ LGL + KL A+R+VL EYGN+GA SV FILDE+RKKS EE KATTGE
Sbjct: 303 PGGPAIVDQVEEQLGLKEGKLRATRHVLSEYGNMGAPSVHFILDEMRKKSIEEGKATTGE 362
Query: 360 GLDCGVLFGCGPGLTVETVVLQS 382
GL+ GV+ G GPGLTVET VL+S
Sbjct: 363 GLEWGVVIGIGPGLTVETAVLRS 385
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| UNIPROTKB|D2DRC5 BIS3 "Biphenyl synthase 3" [Sorbus aucuparia (taxid:36599)] | Back alignment and assigned GO terms |
|---|
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 214/384 (55%), Positives = 273/384 (71%)
Query: 1 MTTVKSNQRPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPI 60
M V N+ A ILA+GTA PPN F+Q DYPDF FR T +EH+T+L+EKF RICE+
Sbjct: 1 MAPVVKNEPQHAKILAIGTANPPNVFHQKDYPDFLFRVTKNEHRTDLREKFDRICEKSRT 60
Query: 61 NKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT 120
KRY HLTEE+LK NPN+ Y APSL+ RQ + EVPKLG+EA+LKAIKEWGQ +SKIT
Sbjct: 61 KKRYLHLTEEMLKANPNIYTYGAPSLNVRQDICNIEVPKLGQEASLKAIKEWGQPISKIT 120
Query: 121 HLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGAR 180
HLIF VDMPG D +L+KLLGL PSV R MIY GCY G TV+R+AKD AENN GAR
Sbjct: 121 HLIFCTASCVDMPGCDFQLIKLLGLDPSVTRTMIYEAGCYAGATVLRMAKDFAENNKGAR 180
Query: 181 VLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQ 240
VLVVC++I + FH ++THLD+LV QA+F D P+ ER LF++++C Q
Sbjct: 181 VLVVCAEITTVFFHGLTDTHLDILVGQALFADGASAVIVGANPE-PEIERPLFEIVACRQ 239
Query: 241 TTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI-GIS-DWNSLFYVL 298
T +P++E+ + ++EMG +LS DVP +G + ++ + G + DWNSLF+ +
Sbjct: 240 TILPNSEHGVVANIREMGFNYYLSGDVPKFVGGNVVDFMTKTFEKVDGKNKDWNSLFFSV 299
Query: 299 HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358
HPGG ++DQVE+ LGL + KL A+R+VL EYGN+GA +V FILDE+R KS EE K TTG
Sbjct: 300 HPGGPAIVDQVEEKLGLKEGKLRATRHVLSEYGNMGAPTVHFILDEMRNKSIEEGKTTTG 359
Query: 359 EGLDCGVLFGCGPGLTVETVVLQS 382
EGL+ GV+ G GPGLTVET VL+S
Sbjct: 360 EGLEWGVVIGIGPGLTVETAVLRS 383
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| UNIPROTKB|Q8SAS8 Q8SAS8 "Trihydroxybenzophenone synthase" [Hypericum androsaemum (taxid:140968)] | Back alignment and assigned GO terms |
|---|
Score = 1081 (385.6 bits), Expect = 2.1e-109, P = 2.1e-109
Identities = 210/374 (56%), Positives = 264/374 (70%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A++LA+GT P + Q DYPDFYFR TNSEH TELKEKFKRIC + I KR+F+LTEEI
Sbjct: 20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEI 79
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKEN + Y A SLDARQ +L EVPKLG+EAALKAI EWGQ +SKITH++F+ G
Sbjct: 80 LKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFM 139
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD + +LLGL +V R+M+YNQGC+ GGT +R+AKD+AENN GARVLVVC++ +
Sbjct: 140 MPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAM 199
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
FH P+E+HLDV+V QA+F D PD+++ ER +F +LS +QT +P ++ IT
Sbjct: 200 TFHAPNESHLDVIVGQAMFSDGAAALIIGACPDVASGERAVFNILSASQTIVPGSDGAIT 259
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
EMG+ L DV I + A SP+G+SDWNSLFY +HPGG G+ID V
Sbjct: 260 AHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRGIIDGVAG 319
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
NLG+ + L A+R+VL EYGN+G+A V FILDE+RK S K TTG+G + G L G GP
Sbjct: 320 NLGIKDENLVATRHVLGEYGNMGSACVMFILDELRKSSKVNGKPTTGDGKEFGCLIGLGP 379
Query: 372 GLTVETVVLQSFPI 385
GLTVE VVLQS PI
Sbjct: 380 GLTVEAVVLQSVPI 393
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| UNIPROTKB|Q8LIL0 LOC_Os07g17010 "Curcuminoid synthase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 168/375 (44%), Positives = 234/375 (62%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A +LA+GTA PPNC Q ++PDFYFR TNS+H T LK+KFKRIC+ + +RY H TEE+
Sbjct: 27 AAVLAIGTANPPNCVTQEEFPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEM 86
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L +P +APSLDAR + D VP+L EAA KAI EWG+ + ITHL+ + G
Sbjct: 87 LSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 146
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D RLV LLGL+PSV R M++ GC+ G +RLAKD+AEN+ GARVLVV +++ ++
Sbjct: 147 VPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLM 206
Query: 192 DFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F P E L+VQ +FGD D + ER LF+++S QT IP++++ +
Sbjct: 207 YFTGPDEGCFRTLLVQGLFGDGAAAVIVGA--DADDVERPLFEIVSAAQTIIPESDHALN 264
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI----GISDWNSLFYVLHPGGDGLID 307
+ E + G L VP IG + +CL + P+ G WN LF+ +HPG ++D
Sbjct: 265 MRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMD 324
Query: 308 QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLF 367
QV+ LGL KL ASR VL +YGN+ A+V F LDE+R++ E A GE + GV+
Sbjct: 325 QVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEA--AAAGEWPELGVMM 382
Query: 368 GCGPGLTVETVVLQS 382
GPG+TV+ ++L +
Sbjct: 383 AFGPGMTVDAMLLHA 397
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| TAIR|locus:2116845 LAP5 "LESS ADHESIVE POLLEN 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 131/383 (34%), Positives = 211/383 (55%)
Query: 5 KSNQRPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRY 64
KSN A TILA+G A P Q D YF+ T + ELK+K R+C+ + RY
Sbjct: 14 KSNPGKA-TILALGKAFPHQLVMQEYLVDGYFKTTKCDDP-ELKQKLTRLCKTTTVKTRY 71
Query: 65 FHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIF 124
++EEILK+ P + ++ R + D V ++ EA+ IK WG+S+S ITH+++
Sbjct: 72 VVMSEEILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVVY 131
Query: 125 SAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVV 184
+ +PG D+ L K LGL P +R+++Y GC G +R+AKDIAENNPG+RVL+
Sbjct: 132 VSSSEARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLA 191
Query: 185 CSDIRVLDFHEPSETHLDVLVVQAVFGDXXXXXXXXXXPDISNHERTLFQVLSCTQTTIP 244
S+ ++ F PS LV A+FGD PD E+ LF++ + Q +P
Sbjct: 192 TSETTIIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPD-PICEKPLFELHTAIQNFLP 250
Query: 245 DTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS--DWNSLFYVLHPGG 302
+TE I G+L E GI LS ++P I + + G++ ++N +F+ +HPGG
Sbjct: 251 ETEKTIDGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGG 310
Query: 303 DGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLD 362
+++++EK L L +KL SR L +YGN + S+ ++L+ + ++S + R E +
Sbjct: 311 PAILNRIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESKKVRNMNEEEN-E 369
Query: 363 CGVLFGCGPGLTVETVVLQSFPI 385
G++ GPG+T E ++ ++ +
Sbjct: 370 WGLILAFGPGVTFEGIIARNLDV 392
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9XGX2 | CHS1_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6243 | 0.9820 | 0.9551 | N/A | no |
| Q9XGX1 | CHS7_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6302 | 0.9769 | 0.9525 | N/A | no |
| P51090 | CHSY_VITVI | 2, ., 3, ., 1, ., 7, 4 | 0.6692 | 0.9692 | 0.9618 | yes | no |
| Q9LKP7 | CHSY_DIAMO | 2, ., 3, ., 1, ., 7, 4 | 0.6207 | 0.9794 | 0.9769 | N/A | no |
| Q41436 | CHSA_SOLTU | 2, ., 3, ., 1, ., 7, 4 | 0.6549 | 0.9487 | 0.9511 | N/A | no |
| P51075 | CHSY_BETPN | 2, ., 3, ., 1, ., 7, 4 | 0.6354 | 0.9769 | 0.9645 | N/A | no |
| P08894 | CHSA_PETHY | 2, ., 3, ., 1, ., 7, 4 | 0.6495 | 0.9487 | 0.9511 | N/A | no |
| Q9ZS40 | CHS2_DAUCA | 2, ., 3, ., 1, ., 7, 4 | 0.6365 | 0.9871 | 0.9697 | N/A | no |
| Q9SBL7 | CHS2_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6269 | 0.9820 | 0.9551 | N/A | no |
| Q9SBL6 | CHS3_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6295 | 0.9820 | 0.9551 | N/A | no |
| Q9SBL5 | CHS4_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6295 | 0.9820 | 0.9551 | N/A | no |
| Q9SBL4 | CHS5_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6295 | 0.9820 | 0.9551 | N/A | no |
| Q9SBL3 | CHS6_SORBI | 2, ., 3, ., 1, ., 7, 4 | 0.6295 | 0.9820 | 0.9551 | N/A | no |
| O04220 | CHSY_CHRAE | 2, ., 3, ., 1, ., 7, 4 | 0.6304 | 0.9820 | 0.9671 | N/A | no |
| P51082 | CHSB_PEA | 2, ., 3, ., 1, ., 7, 4 | 0.6415 | 0.9487 | 0.9511 | N/A | no |
| Q9ZRR8 | CHS1_CASGL | 2, ., 3, ., 1, ., 7, 4 | 0.6413 | 0.9717 | 0.9742 | N/A | no |
| P48392 | CHS3_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6380 | 0.9769 | 0.9454 | N/A | no |
| O04111 | CHSY_PERFR | 2, ., 3, ., 1, ., 7, 4 | 0.6173 | 0.9897 | 0.9872 | N/A | no |
| P48390 | CHS1_GERHY | 2, ., 3, ., 1, ., 7, 4 | 0.6230 | 0.9923 | 0.9723 | N/A | no |
| P06515 | CHSY_ANTMA | 2, ., 3, ., 1, ., 7, 4 | 0.6138 | 0.9871 | 0.9871 | N/A | no |
| Q43188 | CHS2_SOLTU | 2, ., 3, ., 1, ., 7, 4 | 0.6430 | 0.9692 | 0.9717 | N/A | no |
| O23729 | CHS3_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6237 | 0.9820 | 0.9720 | N/A | no |
| Q43163 | CHSB_SOLTU | 2, ., 3, ., 1, ., 7, 4 | 0.6549 | 0.9487 | 0.9511 | N/A | no |
| A2ZEX7 | CHS1_ORYSI | 2, ., 3, ., 1, ., 7, 4 | 0.6243 | 0.9820 | 0.9623 | N/A | no |
| O22652 | CHSY_RAPSA | 2, ., 3, ., 1, ., 7, 4 | 0.6223 | 0.9794 | 0.9695 | N/A | no |
| P17818 | CHSY_MATIN | 2, ., 3, ., 1, ., 7, 4 | 0.6145 | 0.9794 | 0.9695 | N/A | no |
| Q9FSB9 | CHS1_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6408 | 0.9794 | 0.9720 | N/A | no |
| Q9FSB8 | CHS2_RUTGR | 2, ., 3, ., 1, ., 7, 4 | 0.6382 | 0.9794 | 0.9720 | N/A | no |
| P23419 | CHS2_SOLLC | 2, ., 3, ., 1, ., 7, 4 | 0.6304 | 0.9769 | 0.9794 | N/A | no |
| Q8RVK9 | CHS_CANSA | 2, ., 3, ., 1, ., 7, 4 | 0.6390 | 0.9564 | 0.9588 | N/A | no |
| Q9FUB7 | CHSY_HYPAN | 2, ., 3, ., 1, ., 7, 4 | 0.6233 | 0.9794 | 0.9794 | N/A | no |
| P26018 | CHS1_HORVU | 2, ., 3, ., 1, ., 7, 4 | 0.6165 | 0.9820 | 0.9623 | N/A | no |
| Q9SEP4 | CHSY_ARAAL | 2, ., 3, ., 1, ., 7, 4 | 0.6098 | 0.9871 | 0.9846 | N/A | no |
| Q9SEP2 | CHSY_CARAN | 2, ., 3, ., 1, ., 7, 4 | 0.6223 | 0.9794 | 0.9670 | N/A | no |
| P24825 | CHS2_MAIZE | 2, ., 3, ., 1, ., 7, 4 | 0.6347 | 0.9820 | 0.9575 | N/A | no |
| P16107 | CHSY_PETCR | 2, ., 3, ., 1, ., 7, 4 | 0.6443 | 0.9871 | 0.9673 | N/A | no |
| P53415 | CHS2_SECCE | 2, ., 3, ., 1, ., 7, 4 | 0.6171 | 0.9769 | 0.9670 | N/A | no |
| P48388 | CHS3_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6426 | 0.9589 | 0.9614 | N/A | no |
| P13417 | CHS3_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6197 | 0.9794 | 0.9670 | N/A | no |
| P13416 | CHS1_SINAL | 2, ., 3, ., 1, ., 7, 4 | 0.6149 | 0.9871 | 0.9746 | N/A | no |
| Q9ZRS4 | CHSY_CATRO | 2, ., 3, ., 1, ., 7, 4 | 0.6328 | 0.9769 | 0.9794 | N/A | no |
| P48385 | CHSY_CALCH | 2, ., 3, ., 1, ., 7, 4 | 0.6347 | 0.9820 | 0.9623 | N/A | no |
| P48387 | CHS2_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6227 | 0.9769 | 0.9794 | N/A | no |
| P48386 | CHS1_CAMSI | 2, ., 3, ., 1, ., 7, 4 | 0.6288 | 0.9794 | 0.9820 | N/A | no |
| Q2R3A1 | CHS1_ORYSJ | 2, ., 3, ., 1, ., 7, 4 | 0.6269 | 0.9820 | 0.9623 | yes | no |
| P22928 | CHSJ_PETHY | 2, ., 3, ., 1, ., 7, 4 | 0.6304 | 0.9769 | 0.9794 | N/A | no |
| O23730 | CHS4_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6237 | 0.9820 | 0.9720 | N/A | no |
| O23731 | CHS8_BROFI | 2, ., 3, ., 1, ., 7, 4 | 0.6237 | 0.9820 | 0.9720 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.976 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | CHS2 | SubName- Full=Chromosome chr14 scaffold_9, whole genome shotgun sequence;; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin (By similarity) (393 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | CHI1 | RecName- Full=Chalcone--flavonone isomerase 2; Short=Chalcone isomerase 2; EC=5.5.1.6;; Catalyz [...] (234 aa) | • | • | 0.912 | ||||||
 | GSVIVG00025189001 | SubName- Full=Chromosome chr9 scaffold_33, whole genome shotgun sequence; (429 aa) | • | 0.899 | |||||||
 | GSVIVG00023932001 | SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (505 aa) | • | 0.899 | |||||||
 | GSVIVG00023306001 | SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (508 aa) | • | 0.899 | |||||||
 | GSVIVG00019520001 | SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (247 aa) | • | 0.899 | |||||||
 | GSVIVG00017017001 | SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (532 aa) | • | 0.899 | |||||||
 | GSVIVG00007155001 | SubName- Full=Chromosome undetermined scaffold_184, whole genome shotgun sequence; (534 aa) | • | 0.899 | |||||||
 | GSVIVG00002827001 | SubName- Full=Chromosome chr1 scaffold_136, whole genome shotgun sequence; (235 aa) | • | 0.899 | |||||||
 | 4CL | SubName- Full=Chromosome chr16 scaffold_10, whole genome shotgun sequence; (378 aa) | • | • | 0.889 | ||||||
 | GSVIVG00031383001 | SubName- Full=Chromosome chr11 scaffold_56, whole genome shotgun sequence; (548 aa) | • | • | 0.802 | ||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 390 | |||
| PLN03172 | 393 | PLN03172, PLN03172, chalcone synthase family prote | 0.0 | |
| PLN03170 | 401 | PLN03170, PLN03170, chalcone synthase; Provisional | 0.0 | |
| PLN03173 | 391 | PLN03173, PLN03173, chalcone synthase; Provisional | 0.0 | |
| pfam00195 | 227 | pfam00195, Chal_sti_synt_N, Chalcone and stilbene | 1e-139 | |
| PLN03168 | 389 | PLN03168, PLN03168, chalcone synthase; Provisional | 1e-135 | |
| PLN03171 | 399 | PLN03171, PLN03171, chalcone synthase-like protein | 1e-132 | |
| cd00831 | 361 | cd00831, CHS_like, Chalcone and stilbene synthases | 1e-131 | |
| PLN03169 | 391 | PLN03169, PLN03169, chalcone synthase family prote | 7e-98 | |
| pfam02797 | 151 | pfam02797, Chal_sti_synt_C, Chalcone and stilbene | 1e-71 | |
| COG3424 | 356 | COG3424, BcsA, Predicted naringenin-chalcone synth | 9e-49 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 6e-45 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 1e-37 | |
| cd00827 | 324 | cd00827, init_cond_enzymes, "initiating" condensin | 4e-29 | |
| cd00830 | 320 | cd00830, KAS_III, Ketoacyl-acyl carrier protein sy | 4e-14 | |
| COG0332 | 323 | COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | 9e-13 | |
| TIGR00747 | 318 | TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) | 6e-09 | |
| CHL00203 | 326 | CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein syn | 2e-08 | |
| COG3425 | 377 | COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synt | 5e-08 | |
| PLN00415 | 466 | PLN00415, PLN00415, 3-ketoacyl-CoA synthase | 1e-07 | |
| pfam08541 | 90 | pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier- | 2e-06 | |
| pfam08545 | 80 | pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-pr | 3e-05 | |
| PLN02377 | 502 | PLN02377, PLN02377, 3-ketoacyl-CoA synthase | 4e-05 | |
| TIGR01835 | 379 | TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylgluta | 1e-04 | |
| PLN02932 | 478 | PLN02932, PLN02932, 3-ketoacyl-CoA synthase | 1e-04 | |
| PRK12879 | 325 | PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protei | 2e-04 | |
| PLN02192 | 511 | PLN02192, PLN02192, 3-ketoacyl-CoA synthase | 0.002 |
| >gnl|CDD|178716 PLN03172, PLN03172, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 537 bits (1384), Expect = 0.0
Identities = 249/387 (64%), Positives = 297/387 (76%), Gaps = 3/387 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR ATILA+G ATP NC QADYPD+YFR TNSEH TELKEKFKR+C++ I
Sbjct: 7 IRKAQRAEGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIK 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENPNMC Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGLKPSV R M+Y QGC+ GGTV+RLAKD+AENN G+RV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIGA PD ER LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K I K L A +PIGI+DWNS+F++ HPG
Sbjct: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE L L ++KL A+R+VL +YGN+ +A V FILDE+RKKS EE K +TGEGL
Sbjct: 306 GPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDST 388
+ GVLFG GPGLTVETVVL S P ++
Sbjct: 366 EWGVLFGFGPGLTVETVVLHSVPAEAA 392
|
Length = 393 |
| >gnl|CDD|178714 PLN03170, PLN03170, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 521 bits (1342), Expect = 0.0
Identities = 243/386 (62%), Positives = 298/386 (77%), Gaps = 3/386 (0%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
V+ QR AT+LA+GTATP NC +QADYPD+YFR T SEH TELKEKFKR+C++ I
Sbjct: 11 VRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIR 70
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEE L ENPNMC Y APSLDARQ +++ EVPKLGK AA KAIKEWGQ SKITH
Sbjct: 71 KRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITH 130
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L K+LGL+PSVNRLM+Y QGC+ GGTV+R+AKD+AENN GARV
Sbjct: 131 LVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARV 190
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PSE+HLD +V QA+FGDGA A I+GA PD ER LFQ++S +QT
Sbjct: 191 LVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQT 249
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD+E I G L+E+G+ HL DVP I K I + L A P+GI+D+NS+F+V HPG
Sbjct: 250 ILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPG 309
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE +GL K+++ A+R+VL EYGN+ +A V FILDE+RK+S E+ +ATTGEG
Sbjct: 310 GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGF 369
Query: 362 DCGVLFGCGPGLTVETVVLQSFPIDS 387
D GVLFG GPGLTVETVVL S PI +
Sbjct: 370 DWGVLFGFGPGLTVETVVLHSVPITT 395
|
Length = 401 |
| >gnl|CDD|178717 PLN03173, PLN03173, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 508 bits (1309), Expect = 0.0
Identities = 240/381 (62%), Positives = 292/381 (76%), Gaps = 3/381 (0%)
Query: 4 VKSNQRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ QR ATI+A+GT+TPPNC Q+ YPD+YFR TNSEHK ELKEKFKR+CE+ I
Sbjct: 7 IRKAQRAEGPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIK 66
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
KRY HLTEEILKENP++C Y APSLDARQ M++ EVPKLGKEAA KAIKEWGQ SKITH
Sbjct: 67 KRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITH 126
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+F GVDMPGAD +L KLLGL+ SV R M+Y QGC+ GGTV+RLAKD+AENN GARV
Sbjct: 127 LVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARV 186
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVCS+I + F PS+THLD LV QA+FGDGA A IIG+ P + E+ LF+++S QT
Sbjct: 187 LVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDP-VLGVEKPLFELVSAAQT 245
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+PD++ I G L+E+G+ HL DVP I K + K L+ A P+GISDWNSLF++ HPG
Sbjct: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPG 305
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G ++DQVE L L +KL A+R+VL EYGN+ +A V FILDE+RKKS E+ +TGEGL
Sbjct: 306 GPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGL 365
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
+ GVLFG GPGLTVETVVL S
Sbjct: 366 EWGVLFGFGPGLTVETVVLHS 386
|
Length = 391 |
| >gnl|CDD|201072 pfam00195, Chal_sti_synt_N, Chalcone and stilbene synthases, N-terminal domain | Back alignment and domain information |
|---|
Score = 396 bits (1019), Expect = e-139
Identities = 150/212 (70%), Positives = 171/212 (80%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+GTATP NC Q+ YPD+YFR T SEH T+LKEKF+RICE+ I KRY LTEEI
Sbjct: 16 ATILAIGTATPSNCVDQSTYPDYYFRVTKSEHLTDLKEKFQRICEKSTIKKRYMVLTEEI 75
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LKENP +C APSLDARQ + + EVPKLGKEAALKAIKEWGQ SKITHL+F GVD
Sbjct: 76 LKENPELCTEMAPSLDARQDIAVVEVPKLGKEAALKAIKEWGQPKSKITHLVFCTTSGVD 135
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L KLLGL+PSV R+M+Y QGC+ GGTV+RLAKD+AENN GARVLVVCS+I +
Sbjct: 136 MPGADYQLTKLLGLRPSVKRVMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAV 195
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223
F PSETHLD LV QA+FGDGA A IIG+ P
Sbjct: 196 TFRGPSETHLDSLVGQALFGDGAAAVIIGSDP 227
|
The C-terminal domain of Chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in this N-terminal domain. Length = 227 |
| >gnl|CDD|178712 PLN03168, PLN03168, chalcone synthase; Provisional | Back alignment and domain information |
|---|
Score = 392 bits (1008), Expect = e-135
Identities = 184/374 (49%), Positives = 251/374 (67%), Gaps = 1/374 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A +L +GTA PP F Q++YPDF+F TN K LK KFKRIC++ I KR+ LTEE+
Sbjct: 16 ACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEV 75
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
LK NP +C Y PSL+ R +++ +VPKL EAA KAIKEWG S ITH++F+ GV+
Sbjct: 76 LKANPGICTYMEPSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVN 135
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD L KLLGLKP+V R+M+Y GC+ G +V+R+AKD+AENN GARVL V S++ +
Sbjct: 136 MPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV 195
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
+ PSE HLD LV A+FGDGAG ++G+ P E+ LF+V +T +P+++ I
Sbjct: 196 TYRAPSENHLDGLVGSALFGDGAGVYVVGSDPK-PEVEKALFEVHWAGETILPESDGAID 254
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L E G+ HL DVP I K I K L+ A +G DWN +F+ +HPGG ++DQVE
Sbjct: 255 GHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPDWNEMFWAVHPGGPAILDQVEA 314
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L KDK+ SR +L E+GN+ +ASV F+LD++R++S + +T GEG + G G GP
Sbjct: 315 KLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGP 374
Query: 372 GLTVETVVLQSFPI 385
GLT+E +VL++
Sbjct: 375 GLTLEVLVLRAAAN 388
|
Length = 389 |
| >gnl|CDD|178715 PLN03171, PLN03171, chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Score = 384 bits (987), Expect = e-132
Identities = 178/376 (47%), Positives = 244/376 (64%), Gaps = 9/376 (2%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A +LA+GTA P NC Q ++PDFYFRAT S+H T LK+KFKRIC+ + KRY H TEE+
Sbjct: 23 AAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEEL 82
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L +P ++APSLDAR + D VP+L EAA KAI EWG+ + ITHL+ + G
Sbjct: 83 LSAHPEFLDHDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH 142
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D RLV LLGL+PSV R M++ GC+ G +RLAKD+AENN GARVLVV ++I +L
Sbjct: 143 IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLL 202
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F+ P E L+ Q +FGDGA A I+GA D + ER LF+++S Q IP++++ I
Sbjct: 203 LFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIPESDDAIN 260
Query: 252 GQLKEMGIYGHLSL-DVPVAIGKYIGKCLSNAMSP----IGISDWNSLFYVLHPGGDGLI 306
E G+ G++ VP IG I +CL +A +P G ++WN LF+ +HPG ++
Sbjct: 261 MHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVHPGSSAIL 320
Query: 307 DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVL 366
DQV+ LGL +KL ASR VL +YGN+ A+V F LDE+R++ E A G + GV+
Sbjct: 321 DQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQ--MEEAAAAGAWPELGVM 378
Query: 367 FGCGPGLTVETVVLQS 382
GPGLTV+ ++L +
Sbjct: 379 MAFGPGLTVDAMLLHA 394
|
Length = 399 |
| >gnl|CDD|238427 cd00831, CHS_like, Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Score = 379 bits (975), Expect = e-131
Identities = 146/374 (39%), Positives = 204/374 (54%), Gaps = 17/374 (4%)
Query: 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLT-- 68
AATILA+GTA PP+ Q++ DFY R +S+H ELKEK KR+C + I RY L
Sbjct: 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGG 60
Query: 69 EEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFY 128
EE P M +PSLD R + ++E +L +EAA A+ E G S I HL+ +
Sbjct: 61 EETYAPRPEM----SPSLDERNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTST 116
Query: 129 GVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
G P D L+ LGL+P V R + GC G + LAKD+ E NPGARVLVV +++
Sbjct: 117 GNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTEL 176
Query: 189 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTEN 248
L + P H +LV A+FGDGA A ++ P ER LF+++ T +PD+E+
Sbjct: 177 CSLWYRGPD--HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSED 234
Query: 249 YITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSP--IGISDWNSLFYVLHPGGDGLI 306
+ L E G+ LS DVP + K + + L ++ IG+ + +HPGG ++
Sbjct: 235 AMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGGRAVL 294
Query: 307 DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVL 366
D VEK LGL + L ASR VLR YGN+ ++SV ++L + K +R D G+L
Sbjct: 295 DAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKR-------GDRGLL 347
Query: 367 FGCGPGLTVETVVL 380
GPG T E+ V
Sbjct: 348 IAFGPGFTCESAVW 361
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. Length = 361 |
| >gnl|CDD|215612 PLN03169, PLN03169, chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Score = 296 bits (760), Expect = 7e-98
Identities = 144/373 (38%), Positives = 210/373 (56%), Gaps = 8/373 (2%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+G A P Q D YFR T + LKEK +R+C+ + RY +++EI
Sbjct: 22 ATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEI 80
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L + P + P++ R + + V ++ EA+L IKEWG+ VS ITHL++ +
Sbjct: 81 LDKYPELATEGTPTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEAR 140
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
+PG D+ L K LGL P V R+M+Y GC G +R+AKDIAENNPG+RVL+ S+ +L
Sbjct: 141 LPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTIL 200
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PS LV A+FGDGA A IIGA P I E F++ + Q +P TE I
Sbjct: 201 GFRPPSPDRPYDLVGAALFGDGAAAVIIGADP-IPVSESPFFELHTAIQQFLPGTEKTID 259
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS--DWNSLFYVLHPGGDGLIDQV 309
G+L E GI L ++P I I M G+ D+N LF+ +HPGG +++++
Sbjct: 260 GRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRL 319
Query: 310 EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGC 369
EK L L +KL SR L +YGNV + ++ ++L+ +R EE K E + G++
Sbjct: 320 EKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMR----EELKKKGEEDEEWGLILAF 375
Query: 370 GPGLTVETVVLQS 382
GPG+T E ++ ++
Sbjct: 376 GPGITFEGILARN 388
|
Length = 391 |
| >gnl|CDD|111670 pfam02797, Chal_sti_synt_C, Chalcone and stilbene synthases, C-terminal domain | Back alignment and domain information |
|---|
Score = 220 bits (563), Expect = 1e-71
Identities = 89/151 (58%), Positives = 113/151 (74%)
Query: 234 QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNS 293
+++S QT +PD++ I G L+E G+ HL DVP I K I KCL A P+GISDWNS
Sbjct: 1 ELVSAAQTFLPDSDGAIDGHLREEGLTFHLLKDVPQLISKNIEKCLVEAFDPLGISDWNS 60
Query: 294 LFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353
+F++ HPGG ++DQVE LGL +KL ASR+VL EYGN+ +A V FILDE+RKKS ++
Sbjct: 61 IFWIAHPGGPAILDQVEAKLGLKPEKLRASRHVLSEYGNMSSACVLFILDEMRKKSLKKG 120
Query: 354 KATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384
K+TTGEGL+ GVLFG GPGLTVETVVL+S P
Sbjct: 121 KSTTGEGLEWGVLFGFGPGLTVETVVLRSVP 151
|
This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. Length = 151 |
| >gnl|CDD|225958 COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 168 bits (427), Expect = 9e-49
Identities = 105/376 (27%), Positives = 173/376 (46%), Gaps = 30/376 (7%)
Query: 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ-----PINKRYF 65
A I +V TA PP + Q++ T+S + +E + I R IN+R+
Sbjct: 1 MAVIASVATALPPYRYNQSE-------ITDSFAELPFQEGREDI-PRVLHANAQINRRHL 52
Query: 66 HLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFS 125
L + +E + + I+E LG +A +A+ I ++
Sbjct: 53 VLPLDWYRE--------PHGFGEKNEIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTV 104
Query: 126 AFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVC 185
G+ P D R+V LGL P R+ ++ GC G + A+D P A VLVVC
Sbjct: 105 TSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVC 164
Query: 186 SDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPD 245
++ L + +T + LV A+FGDGA A ++ +L T PD
Sbjct: 165 VELCSLTYVFADDTKSN-LVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPD 223
Query: 246 TENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGL 305
+E+ + + + G+ LS D+P I Y+ ++ ++ G+S + +V+HPGG +
Sbjct: 224 SEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEAWVVHPGGPKV 283
Query: 306 IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGV 365
ID E++LGL + L S VLREYGN+ +A+V F+L++ +K+ + G+
Sbjct: 284 IDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKAPKSGSR--------GL 335
Query: 366 LFGCGPGLTVETVVLQ 381
+F GPG E V+L
Sbjct: 336 MFAMGPGFCSELVLLD 351
|
Length = 356 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 155 bits (393), Expect = 6e-45
Identities = 70/288 (24%), Positives = 101/288 (35%), Gaps = 44/288 (15%)
Query: 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD-MPGADVRLVKLLGLKPSVNRLMIY 155
+LG EAA +AI + G S I +I G GA +L LG+ +
Sbjct: 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGI-SGGPAYSV- 64
Query: 156 NQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAG 215
NQ C G T + LA +N VL S+ VFGDGA
Sbjct: 65 NQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------FVFGDGAA 105
Query: 216 AAIIGAGPDISNH-ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKY 274
AA++ + +++S T + VP G+
Sbjct: 106 AAVVESEEHALRRGAHPQAEIVSTAATFDGASM-------------------VPAVSGEG 146
Query: 275 IGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKL--WASRYVLREYGN 332
+ + A+ G++ + + H G + D VE LGL D + A L G+
Sbjct: 147 LARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGH 206
Query: 333 VGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
A+ ILDE+ E T +L G G G T VVL
Sbjct: 207 PLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 138 bits (348), Expect = 1e-37
Identities = 61/343 (17%), Positives = 98/343 (28%), Gaps = 80/343 (23%)
Query: 97 VPKLGKEAALKAIKEWG----QSVSKITHLIFSAFYGVD--------------------- 131
V LG EAA +AI + G + I ++ G
Sbjct: 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKA 70
Query: 132 -MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV 190
PGA ++ LG+ + C + LA D +N VL S+
Sbjct: 71 MFPGASGQIATPLGIH--GPAYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELA 127
Query: 191 LDFHEPSET------------HLDVLVVQAVFGDGAGAAIIGAGPD-ISNHERTLFQVLS 237
+ D VFGDGAGA ++ ++ +++
Sbjct: 128 APMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVG 187
Query: 238 CTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYV 297
T + + + A++ G++ W+ + V
Sbjct: 188 TAATIDGAGMG------------------AFAPSAEGLARAAKEALAVAGLTVWDIDYLV 229
Query: 298 LHPGGDGLIDQVEKNLGLGKDKLW--ASRYVLREYGNVGAASVFFILDEVRKKSFEERKA 355
H G + D E L + A GN+ +A+V +DE
Sbjct: 230 AHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIP 289
Query: 356 ------------------TTGEGLDCGVLFGCGPGLTVETVVL 380
TT L +L G G G T T+VL
Sbjct: 290 PSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238423 cd00827, init_cond_enzymes, "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-29
Identities = 78/293 (26%), Positives = 110/293 (37%), Gaps = 25/293 (8%)
Query: 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD-MPGADVRLVKLLGLKPSVNRLMIY 155
VP + EAA +A++ G I LI + +D A L +LLGL +
Sbjct: 48 VPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTN-AEAFDL- 105
Query: 156 NQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAG 215
Q CY G ++LA ++ E+ P LVV SDI E S + GDGA
Sbjct: 106 KQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLDEGSAL-------EPTLGDGAA 158
Query: 216 AAIIGAGPDI-SNHERTLFQVLSCTQTTIP------DTENYITGQLKEMGIYGHLSLDVP 268
A ++ P I + + P V
Sbjct: 159 AMLVSRNPGILAAGIVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVF 218
Query: 269 VAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASR-YVL 327
A K I K + A+ G+S+ F P G +++ V K LG +K +R +L
Sbjct: 219 EAAHKLIAKVVRKALDRAGLSEDIDYFVPHQPNGKKILEAVAKKLGGPPEKASQTRWILL 278
Query: 328 REYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
R GN+ AAS+ L + E K G D +LF G G T E VL
Sbjct: 279 RRVGNMYAASILLGLASL----LESGKLKAG---DRVLLFSYGSGFTAEAFVL 324
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. Length = 324 |
| >gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 4e-14
Identities = 76/302 (25%), Positives = 119/302 (39%), Gaps = 55/302 (18%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIF---SAFYGVDMPGADVRLVKLLGLKPSVNRLMIY- 155
L EAA KA+++ G I +I + Y P + LG K + +
Sbjct: 53 LAVEAAKKALEDAGIDADDIDLIIVATSTPDYL--FPATACLVQARLGAKNAAA----FD 106
Query: 156 -NQGC--YMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVF 210
N C ++ G A + + VLVV ++ R+LD+ + S T + +F
Sbjct: 107 INAACSGFLYGLST--AAGLIRSGGAKNVLVVGAETLSRILDWTDRS-TAV-------LF 156
Query: 211 GDGAGAAIIGAGPD---------ISNHERTLFQVLSCTQTTIPDTENYITGQLKEM---G 258
GDGAGA ++ A + S+ + + P + M
Sbjct: 157 GDGAGAVVLEATEEDPGILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGRE 216
Query: 259 IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKD 318
++ +P +I + + K ++P I DW +V H +I+ V K LGL ++
Sbjct: 217 VFKFAVRLMPESIEEALEK---AGLTPDDI-DW----FVPHQANLRIIEAVAKRLGLPEE 268
Query: 319 KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETV 378
K+ L YGN AAS+ LDE EE K G D +L G G GLT
Sbjct: 269 KVV---VNLDRYGNTSAASIPLALDEAI----EEGKLKKG---DLVLLLGFGAGLTWGAA 318
Query: 379 VL 380
+L
Sbjct: 319 LL 320
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. Length = 320 |
| >gnl|CDD|223409 COG0332, FabH, 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 68.0 bits (167), Expect = 9e-13
Identities = 69/301 (22%), Positives = 119/301 (39%), Gaps = 53/301 (17%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIFSAFYGVD-MPGADVRLVKLLGLKPSVNRLMIY--N 156
L EAA KA+++ G S I +I + P + LGL + +
Sbjct: 55 LAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP----AFDLQ 110
Query: 157 QGCYMGGTV--IRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGD 212
C G + + +A + + VLVV ++ R+LD+ + T +FGD
Sbjct: 111 AAC--SGFLYALSVADGLIRSGGYKNVLVVGAETLSRILDWTDRD-TC-------VLFGD 160
Query: 213 GAGAAIIGAGPD----ISNHERTL---FQVLSCTQTTIPDTENYITGQLKEMG---IYGH 262
GAGA ++ A D + + +L + G L M ++
Sbjct: 161 GAGAVVLEATEDDNGILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKF 220
Query: 263 LSLDVPVAIGKYIGKCL-SNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLW 321
A+ K I + L ++P I DW +V H +I+ + K LG+ ++K
Sbjct: 221 ----AVRAMPKAIEEVLEKAGLTPEDI-DW----FVPHQANLRIIEAIAKKLGIPEEK-V 270
Query: 322 ASRYVLREYGNVGAASVFFILDE-VRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
+ +YGN AAS+ LDE +R+ + G+ + +L G GLT ++
Sbjct: 271 VV--TVDKYGNTSAASIPLALDEALREGRIKP-----GDLV---LLEAFGGGLTWGAALV 320
Query: 381 Q 381
+
Sbjct: 321 R 321
|
Length = 323 |
| >gnl|CDD|233113 TIGR00747, fabH, 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 6e-09
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 50/298 (16%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIF---SAFYGVDMPGADVRLVKLLGLK--PSVNRLMI 154
+G EAA +AI+ G S I +I + + P A + LG+K P+
Sbjct: 54 MGFEAAKRAIENAGISKDDIDLIIVATTTPDHA--FPSAACMVQAYLGIKGIPA----FD 107
Query: 155 YNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGD 212
+ C + +AK E+ VLVV ++ LD+ + L FGD
Sbjct: 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTLDWTDRGTCVL--------FGD 159
Query: 213 GAGAAIIGAGPD----ISNH---ERTLFQVLSCTQTTIPDTEN--YITGQLKEMGIYGHL 263
GAGA ++G D IS H + T + L P + +IT + E ++ H
Sbjct: 160 GAGAVVLGESEDPGGIISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNE--VFKH- 216
Query: 264 SLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323
A+ K +G + + G+ + ++V H +I+ + K L L ++ +
Sbjct: 217 ------AVRK-MGDVVEETLEANGLDPEDIDWFVPHQANLRIIEALAKRLELDMSQVVKT 269
Query: 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
+ +YGN AAS+ LDE+ + G+ L +L G GLT +++
Sbjct: 270 ---VHKYGNTSAASIPLALDEL----LRTGRIKPGDLL---LLVAFGGGLTWGAALVR 317
|
FabH in general initiate elongation in type II fatty acid synthase systems found in bacteria and plants. The two members of this subfamily from Bacillus subtilis differ from each other, and from FabH from E. coli, in acyl group specificity. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 318 |
| >gnl|CDD|164577 CHL00203, fabH, 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 2e-08
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 53/306 (17%)
Query: 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN 156
+ KL EAA KA+ + +I +I + D+ G+ +L +G +V ++
Sbjct: 51 LTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV----AFD 106
Query: 157 QGCYMGGTVIRL--AKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGD 212
G ++ L A +N +LVV +D + +D+ + L FGD
Sbjct: 107 ITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWIDWSDRKTCIL--------FGD 158
Query: 213 GAGAAIIGAGPDIS------NHERTLFQVLSCTQ----------TTIPDTE-NYITGQLK 255
GAGAAIIGA + S + L L T +P + I+ K
Sbjct: 159 GAGAAIIGASYENSILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGK 218
Query: 256 EMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGL 315
E +Y VP I KCL+ I DW ++LH +++ + L +
Sbjct: 219 E--VYKFAVFQVPAV----IIKCLNALNISIDEVDW----FILHQANKRILEAIANRLSV 268
Query: 316 GKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTV 375
K+ + L +YGN AAS+ LDE + + K G VL G G GLT
Sbjct: 269 PNSKMITN---LEKYGNTSAASIPLALDE----AIQNNKIQPG---QIIVLSGFGAGLTW 318
Query: 376 ETVVLQ 381
+VL+
Sbjct: 319 GAIVLK 324
|
Length = 326 |
| >gnl|CDD|225959 COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 5e-08
Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 21/132 (15%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIF---SAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN 156
+ EAA A+K SKI +I S V P A + + + LGL PS R
Sbjct: 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVK-PTATI-VAEALGLNPSA-RAADVE 110
Query: 157 QGCYMGGTVIRLAKDIAENNPGARVLVVCSDI---RVLDFHEPSETHLDVLVVQAVFGDG 213
CY G ++ A E+ + LV+ +D D E + G G
Sbjct: 111 FACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPGDALEYT------------AGAG 158
Query: 214 AGAAIIGAGPDI 225
A A +IG P I
Sbjct: 159 AVAFLIGKNPPI 170
|
Length = 377 |
| >gnl|CDD|177808 PLN00415, PLN00415, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 1e-07
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 50/272 (18%)
Query: 133 PGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD 192
P +V LK V + GC G + LA ++ + NP ++V ++ L
Sbjct: 170 PSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLS 229
Query: 193 FHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHE----RTLFQVLSCTQTTIPDTE- 247
+ ++ + LV +F G GAA++ +SN R+ +++ +T ++
Sbjct: 230 MYRGNDRSM--LVPNCLFRVG-GAAVM-----LSNRSQDRVRSKYELTHIVRTHKGSSDK 281
Query: 248 NYITGQLKE--MGIYG-HLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVL------ 298
+Y + KE GI G LS ++ V G + L+ A+ P+ + L ++L
Sbjct: 282 HYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLT-ALGPLVLPLSEKLRFILFLVKSK 340
Query: 299 ----------------------HPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAA 336
H GG L+D VEK LGL + L SR L +GN ++
Sbjct: 341 LFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSS 400
Query: 337 SVFFILDEVRKKSFEER-----KATTGEGLDC 363
S+++ L V K +R + G G C
Sbjct: 401 SLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432
|
Length = 466 |
| >gnl|CDD|117118 pfam08541, ACP_syn_III_C, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal | Back alignment and domain information |
|---|
Score = 45.5 bits (109), Expect = 2e-06
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 295 FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354
++V H +ID V K LGL +K L YGN AAS+ LDE EE K
Sbjct: 13 WFVPHQANLRIIDAVAKRLGLPPEK---VVVNLDRYGNTSAASIPLALDEAV----EEGK 65
Query: 355 ATTGEGLDCGVLFGCGPGLTVETVVLQ 381
G D +L G G GLT VL+
Sbjct: 66 LKPG---DLVLLVGFGAGLTWGAAVLR 89
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.41, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 90 |
| >gnl|CDD|203976 pfam08545, ACP_syn_III, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 3e-05
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 156 NQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDG 213
N C + A + + VLVV ++ R+LD+ + S T + +FGDG
Sbjct: 4 NAACSGFVYALSTAAALIRSGRAKNVLVVGAETLSRILDWTDRS-TAV-------LFGDG 55
Query: 214 AGAAIIGAGPD 224
AGA ++ A +
Sbjct: 56 AGAVVLEATEE 66
|
This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III EC:2.3.1.180, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. Length = 80 |
| >gnl|CDD|166018 PLN02377, PLN02377, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 4e-05
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 275 IGKCLSNAMSPIGISDWNSLF--YVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGN 332
+ K + M P I D+ F + +H GG +ID++EKNL L + ASR L +GN
Sbjct: 376 VKKLFNKKMKPY-IPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGN 434
Query: 333 VGAASVFFILDEVRKKSFEER-----KATTGEGLDC 363
++S+++ L + K + + G G C
Sbjct: 435 TSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKC 470
|
Length = 502 |
| >gnl|CDD|213655 TIGR01835, HMG-CoA-S_prok, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMP-GADVRLVKLLGLKPSVNRLMIYNQG 158
+ AA + KI +IF G+D A V + LLGL+P R Q
Sbjct: 52 MAASAAKPILDR--NDKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFC-RSFELKQA 108
Query: 159 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAI 218
CY +++AK +P +VLV+ SDI P E G GA A +
Sbjct: 109 CYGATAALQMAKGHVALSPDRKVLVIASDIAKYGLESPGE---------PTQGAGAVAML 159
Query: 219 IGAGPDI 225
+ A P +
Sbjct: 160 VSADPKL 166
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. Length = 379 |
| >gnl|CDD|178520 PLN02932, PLN02932, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 296 YVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKA 355
+ +H GG LID++EKNL L + ASR L +GN ++S+++ L ++ E K
Sbjct: 374 FCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYEL------AYTEAKG 427
Query: 356 TTGEG 360
+G
Sbjct: 428 RMKKG 432
|
Length = 478 |
| >gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 39/208 (18%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD----ISNHERT-- 231
+VLV+ ++ +V D+ + + +L FGDGAGA ++ A + I T
Sbjct: 135 KVLVIGAERLSKVTDYTDRT---TCIL-----FGDGAGAVVLEATENEPGFIDYVLGTDG 186
Query: 232 -LFQVLSCTQ--TTIPDTENYITGQLKEMG--IYGHLSLDVPVAIGKYIGKCLSNAMSPI 286
+L T TT+ G + + G ++ +P + + K ++
Sbjct: 187 DGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKA---GLTKD 243
Query: 287 GISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346
I DW + H +I+ + + LG+ +K S + YGN AA++ LD
Sbjct: 244 DI-DW----VIPHQANLRIIESLCEKLGIPMEKTLVS---VEYYGNTSAATIPLALDLAL 295
Query: 347 KKSFEERKATTGEGLDCGVLFGCGPGLT 374
E+ K G+ L +L+G G GLT
Sbjct: 296 ----EQGKIKPGDTL---LLYGFGAGLT 316
|
Length = 325 |
| >gnl|CDD|215123 PLN02192, PLN02192, 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Score = 39.6 bits (92), Expect = 0.002
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 49/331 (14%)
Query: 45 TELKEKFKR-ICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKE 103
TE +F+R I ER + + + L E +L PN C A + + ++ + +L +
Sbjct: 134 TEENLEFQRKILERSGLGESTY-LPEAVLNVPPNPCM--AEARKEAETVMFGAIDQLLAK 190
Query: 104 AALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGG 163
++K I LI + P ++ L+ ++ + GC G
Sbjct: 191 TSVKP--------KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGL 242
Query: 164 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223
I LAK + + +P + LV+ + L+++ ++ + LV +F G GAAI+ +
Sbjct: 243 ISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSM--LVSNCLFRMG-GAAILLSNK 299
Query: 224 DISNHERTLFQVL--------------SCTQTTIPDTENYITGQLKE--MGIYGHL---- 263
S+ R+ +Q++ +C T D+ I L + M + G
Sbjct: 300 R-SDRRRSKYQLVHTVRTHKGADDKCFACV-TQEEDSAGKIGVSLSKDLMAVAGDALKTN 357
Query: 264 -----SLDVPVA-----IGKYIGKCLSNAMSPIGISDWNSLF--YVLHPGGDGLIDQVEK 311
L +P++ +GK L I D+ F + +H GG ++D++EK
Sbjct: 358 ITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRAVLDELEK 417
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFIL 342
NL L + SR L +GN ++S+++ L
Sbjct: 418 NLQLSDWHMEPSRMTLYRFGNTSSSSLWYEL 448
|
Length = 511 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 100.0 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 100.0 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 100.0 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 100.0 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 100.0 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 100.0 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 100.0 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 100.0 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 100.0 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 100.0 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 100.0 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 100.0 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 100.0 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 100.0 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 100.0 | |
| PRK06840 | 339 | hypothetical protein; Validated | 100.0 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 100.0 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 100.0 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 100.0 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 100.0 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 100.0 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 100.0 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 100.0 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 100.0 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 100.0 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 100.0 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.97 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.95 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 99.95 | |
| PF02797 | 151 | Chal_sti_synt_C: Chalcone and stilbene synthases, | 99.94 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 99.86 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 99.86 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 99.85 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.85 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.82 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.73 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 99.73 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.72 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.69 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 99.69 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 99.68 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.67 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.66 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.66 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.65 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.63 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.62 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.62 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.62 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.6 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.59 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.58 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 99.58 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.58 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 99.58 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.57 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 99.54 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.54 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.52 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.52 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.49 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.49 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.48 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.48 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.46 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.46 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.46 | |
| PRK06158 | 384 | thiolase; Provisional | 99.46 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.46 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.45 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.45 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 99.45 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.43 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.43 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 99.43 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.43 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 99.42 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 99.42 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.41 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.4 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.4 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 99.39 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.39 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.38 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.38 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.37 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.36 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.36 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.36 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.35 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.35 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.34 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 99.34 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 99.34 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.33 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 99.31 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.31 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.29 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.28 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.28 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.24 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.22 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.21 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 99.18 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.13 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.07 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.06 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.02 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 99.0 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 98.9 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 98.8 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 98.73 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 98.72 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 98.65 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 98.57 | |
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 98.36 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 98.04 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 97.96 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.94 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 97.87 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 97.16 | |
| PF08540 | 282 | HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A s | 97.11 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 96.77 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 96.23 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 95.88 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 95.73 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 95.5 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 94.96 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 94.18 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 93.58 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 93.29 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 93.25 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 93.2 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 93.05 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 92.51 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 92.39 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 92.37 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 92.2 | |
| PRK06840 | 339 | hypothetical protein; Validated | 91.81 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 91.66 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 91.41 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 91.24 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 90.97 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 90.61 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 90.21 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 89.5 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 88.63 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 88.09 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 88.07 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 87.48 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 87.32 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 86.83 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 86.28 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 85.14 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 85.02 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 84.63 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 84.18 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 82.55 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 81.52 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 81.37 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 81.31 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 81.07 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 80.74 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 80.42 |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-64 Score=494.33 Aligned_cols=373 Identities=65% Similarity=1.048 Sum_probs=327.4
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+++|++.++|+++.+.+.+.++.+..+.++++..+|++++||++||++.+++.+.+.+++..++.|++++|+
T Consensus 16 ~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (393)
T PLN03172 16 PATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQ 95 (393)
T ss_pred CeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHHH
Confidence 58899999999999999999999887666443445566567889999999999999877666666666667889999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.|.+...+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|++.||++|.
T Consensus 96 ~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 175 (393)
T PLN03172 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAK 175 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999966999999999999999876546899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..|.++.|.+.++..+..+|||||+|+||++++. .+...+.+++.+..+.++|.+++.+
T Consensus 176 ~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~-~~~~~~~~~i~~~~~~~~~~t~~~~ 254 (393)
T PLN03172 176 DLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPD-TKIERPLFEIVSAAQTILPDSDGAI 254 (393)
T ss_pred HHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCC-CcccCceeEEeeeccEEecCCcccc
Confidence 999999999999999999997676666544556678899999999999998665 2222345788888778889999999
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+...|+.+.+.+++|+++.+.++++++++|+++|++. .|+ +|++||+|+++++.+++.||++++++..+|+++++
T Consensus 255 ~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~ 333 (393)
T PLN03172 255 DGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSD 333 (393)
T ss_pred cceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9998888887778899999999999999999999999996 888 99999999999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
||||+|+|+|++|++++++..++|++++|.+.+++++++||+|++|++++|||.+.
T Consensus 334 yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~ 389 (393)
T PLN03172 334 YGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSVPA 389 (393)
T ss_pred hCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEecch
Confidence 99999999999999988532223777777444789999999999999999999654
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-64 Score=493.76 Aligned_cols=373 Identities=64% Similarity=1.044 Sum_probs=325.5
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|||+.+|++.++|+++.+.+.+.+..+..++++++..+|++++||++||++.+++.+.+++++..++.|++++|+
T Consensus 20 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 99 (401)
T PLN03170 20 PATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQ 99 (401)
T ss_pred CeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHHH
Confidence 48899999999999999999999987766443344556668889999999999999876655566666677889999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++...+++++++||+|++.||++|.
T Consensus 100 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~ 179 (401)
T PLN03170 100 DIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAK 179 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999967999999999999999886568999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..|.+|.+.+.++..+..+|||||+|+||++++. .++..+.+++.+..+..+|.+++.+
T Consensus 180 ~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~ 258 (401)
T PLN03170 180 DLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPD-ERVERPLFQLVSASQTILPDSEGAI 258 (401)
T ss_pred HHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCc-ccccCCceEEeeccceEecCCcccc
Confidence 999999999999999999998675565433456677899999999999998765 3222234678777677788887778
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+.+.|+.+.++++++..+.+.++++++++|+++|++. +|+ +|++||+|+++++.+++.||++++++..+|+++++
T Consensus 259 ~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~ 337 (401)
T PLN03170 259 DGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSE 337 (401)
T ss_pred cceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 8888888888888999999999999999999999999996 888 99999999999999999999999999988999999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
||||+|+++|++|++++++..++|++++|++.|++++++||+|++|++++|+|.+.
T Consensus 338 ~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 338 YGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred hCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheeccc
Confidence 99999999999999998532223778887544789999999999999999999543
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-64 Score=490.55 Aligned_cols=373 Identities=63% Similarity=1.006 Sum_probs=325.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+..|++.++|+++.+.+.+...++..+.++++..++++++||++||++.+++.+.+.+.+..+..|++++|+
T Consensus 16 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r~ 95 (391)
T PLN03173 16 PATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQ 95 (391)
T ss_pred CeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHHH
Confidence 68999999999999999999999987766433334455567889999999999999987766666666677789999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++++.+++++++||+|++.||++|+
T Consensus 96 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 175 (391)
T PLN03173 96 DMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAK 175 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999966899999999999999876557899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..|.+++|.+.++..+..+|||||+|+||+.++. .+...+.+++.+..+..+|.+++.+
T Consensus 176 ~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~-~~~~~~~~~l~~~~~~~~~~t~~~~ 254 (391)
T PLN03173 176 DLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPV-LGVEKPLFELVSAAQTILPDSDGAI 254 (391)
T ss_pred HHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCC-CCcCCcceEEEeeeeEEecCCccce
Confidence 999999999999999999996676666544555567899999999999998654 3322345788887788889999889
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+...|+.+.+.+++|+.+.+.++.+++++|+++|++. +|| +|++||+|+++++.+++.||++++|+..+|+++++
T Consensus 255 ~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~ 333 (391)
T PLN03173 255 DGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSE 333 (391)
T ss_pred eeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 9999888887778899999999999999999999999996 999 99999999999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
||||+|||+|++|++++++..+++.+++|++++++++++||+|+++++++|+|..+
T Consensus 334 yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~~~ 389 (391)
T PLN03173 334 YGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSVAP 389 (391)
T ss_pred hCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhccC
Confidence 99999999999999999642222444455434789999999999999999999654
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-63 Score=487.69 Aligned_cols=372 Identities=49% Similarity=0.847 Sum_probs=319.5
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+..|++.++|+++.+.+.++..++..+.++++..+|++++||++||++.+++.+.+.+++..+..|++++|+
T Consensus 15 ~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~~r~ 94 (389)
T PLN03168 15 PACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLNVRH 94 (389)
T ss_pred CeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHHHHH
Confidence 58899999999999999999999987766443344566668889999999999999977766667776677889999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++|.+...+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||++++..+++++++||+|+++||++|+
T Consensus 95 ~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~ 174 (389)
T PLN03168 95 DIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAK 174 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999977899999999999999887668999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..|.++.+.+.++..+..+|||||+|+||++++. ...+.+.+++....+.++|++++.+
T Consensus 175 ~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~-~~~~~~~~~~~~~~~~~~p~s~~~~ 253 (389)
T PLN03168 175 DLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPK-PEVEKALFEVHWAGETILPESDGAI 253 (389)
T ss_pred HHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCC-CccCCcceEEEeeeeEEEcCCCCcc
Confidence 999999999999999999998675444433455678999999999999998754 2212235677766667889888888
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+.+.|+.+.+.+++++.+.+.+..+++++|+..|+.. .|+ +|++||+|++|++.++++||++++|+..+|+++++
T Consensus 254 ~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~ 332 (389)
T PLN03168 254 DGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSE 332 (389)
T ss_pred CceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 8988888887777889999999999999999999999885 666 99999999999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
||||+|||+|++|++++++..++|....|.|.|++++++||+|++|++++|||..
T Consensus 333 yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~~ 387 (389)
T PLN03168 333 FGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAAA 387 (389)
T ss_pred hCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheecc
Confidence 9999999999999998764222121000122389999999999999999999953
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-62 Score=477.91 Aligned_cols=364 Identities=38% Similarity=0.666 Sum_probs=308.8
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+++|++.++|+++.+.+.+..... .+.++++.++|++++||++||++.+++.+.+.+.+..+..|++++|+
T Consensus 21 ~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 99 (391)
T PLN03169 21 KATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQRL 99 (391)
T ss_pred CeEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHHH
Confidence 69999999999999999999998654432211 23355567889999999999999755444445555556679999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.|.+.+.+|+++|+++||+++|++++|||+||++|++.+..|+++.+|+++||+++++.+++++++||+|+++||++|.
T Consensus 100 ~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~ 179 (391)
T PLN03169 100 DIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAK 179 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986688999999999999999876457999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..+..+.+....++.+..+|||||+|+||+.++. .......+.+...++..+|.+.+.+
T Consensus 180 ~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~l~~~~~~~ip~~~~~~ 258 (391)
T PLN03169 180 DIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPI-PVSESPFFELHTAIQQFLPGTEKTI 258 (391)
T ss_pred HHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCC-cccCCcceEEEeeeeeEcCCCcccc
Confidence 999999999999999999987554332222345678899999999999998664 2101134566666666778877667
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCC--CCceeEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISD--WNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~--~~di~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
.|.+.++|+.+++++++|+++.+.++++++++|+++|+++ ++|++|++||+|++|++.+++.||+|++|+..+|++++
T Consensus 259 ~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~ 338 (391)
T PLN03169 259 DGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALM 338 (391)
T ss_pred CceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 7777778888888999999999999999999999999984 13447899999999999999999999999998888999
Q ss_pred hcCCCccchHHHHHHHHHHhhhhhcccc---CCCCCceEEEEEEcccccceeeeeEee
Q 036844 329 EYGNVGAASVFFILDEVRKKSFEERKAT---TGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 329 ~~Gn~~sas~~l~L~~~~~~~~~~g~i~---~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
+||||+|||+|++|++++++ ++++ +| |++++++||+|++|++++|||.
T Consensus 339 ~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 339 DYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred HhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhhh
Confidence 99999999999999999987 6665 57 9999999999999999999984
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-62 Score=461.77 Aligned_cols=314 Identities=23% Similarity=0.264 Sum_probs=270.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|.|+|+++++|++++..+ ..+ .+||..++||++||++.++|.
T Consensus 3 ~a~i~g~G~~lP~~~vtn~d~e~~~---~ts---------dewI~~rtGir~R~~a~~~e~------------------- 51 (323)
T COG0332 3 NAKILGIGSYLPERVVTNADLEKRV---DTS---------DEWIETRTGIRERRIAADDET------------------- 51 (323)
T ss_pred cceEEEEEeecCCcccChHHHHhcc---CCC---------cceeeeecCCceeeecCCCcc-------------------
Confidence 5789999999999999999998543 333 389999999999999988773
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
.++|+++|+++||+++|++|+|||+||++|++| +.+|++|++||++||+.... +||++.+|+|+++||++|
T Consensus 52 ------~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~A 123 (323)
T COG0332 52 ------TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSVA 123 (323)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHHH
Confidence 899999999999999999999999999999999 88999999999999999865 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeee----cCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTT----IPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~----~p~ 245 (390)
..++++|.+++||||++|++|. +.++.| +.+..+|||||+|+||++.+...++ ..+.+.+.++.. .|.
T Consensus 124 ~~~i~sG~~k~vLVVg~e~~S~-~ld~~d-----R~t~vlFgDGAgAvvl~~~~~~~~i--~~~~l~sdg~~~~~l~~~~ 195 (323)
T COG0332 124 DGLIRSGGYKNVLVVGAETLSR-ILDWTD-----RDTCVLFGDGAGAVVLEATEDDNGI--LDTDLGSDGSQGDLLYLPG 195 (323)
T ss_pred HHHHHcCCCCEEEEEehhHhhc-cCCHhh-----ccceEEEcCCceEEEEecCCCCcCe--eeeeeeccccCCCeeeccC
Confidence 9999999999999999999997 556543 4588999999999999998731332 123444443321 122
Q ss_pred CCCceeeEeec-ceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 246 TENYITGQLKE-MGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 246 ~~~~~~~~~~~-~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
+.... ..... .++..+.|+++|+++++.++++++++|+++++++ +|| +|+|||+|.++++.++++|++|++|+..+
T Consensus 196 ~~~~~-~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~~~ 273 (323)
T COG0332 196 GGSAT-PKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVVVT 273 (323)
T ss_pred CCCcc-ccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHhhH
Confidence 21111 00001 1233445999999999999999999999999997 999 99999999999999999999999999985
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
+++|||+++||+|++|++++++ |++++| |+++|.+||+|++||++++||.
T Consensus 274 ---~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 274 ---VDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred ---HHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence 9999999999999999999998 999999 9999999999999999999984
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-59 Score=460.98 Aligned_cols=366 Identities=48% Similarity=0.816 Sum_probs=300.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+.+....+..+++++..++|++++||++||++.+++.+.+.+++..+..|++++|+
T Consensus 22 ~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r~ 101 (399)
T PLN03171 22 LAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSLDARL 101 (399)
T ss_pred CcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCHHHHH
Confidence 68999999999999999999998864432223233455567899999999999999876555555666556689999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||++++..+++++.+||+|+++||++|.
T Consensus 102 ~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~ 181 (399)
T PLN03171 102 DIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAK 181 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999955899999999999999875445677889999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccc-hhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETH-LDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~-~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
.++++++.++||||++|.+|..+ ++.+.+ .++.....+|||||+|+||+++++ .. ....+++........|.+.+.
T Consensus 182 ~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~-~~-~~~~~~l~~~~~~~~p~~~~~ 258 (399)
T PLN03171 182 DLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADAD-AA-ERPLFEIVSAAQAIIPESDDA 258 (399)
T ss_pred HHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCC-CC-CCCceEEEEeeeEEecCCchh
Confidence 99999999999999999999755 343322 234445789999999999998764 21 112467776666668888788
Q ss_pred eeeEeecceeEEEeC-CcchHHHHHhHHHHHHHhhcc-----CCCCCCCceeEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 250 ITGQLKEMGIYGHLS-LDVPVAIGKYIGKCLSNAMSP-----IGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~gl~~~~di~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
+.|.....++.+.++ +.+++.+.+.+.++++++|.. .|++. +|+.|++||+|+++++.+++.||++++|+..+
T Consensus 259 ~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl~~ek~~~s 337 (399)
T PLN03171 259 INMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGLEPEKLAAS 337 (399)
T ss_pred eEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCCCHHHhHHH
Confidence 888777667666665 777777766666666666553 57775 88855579999999999999999999999988
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhcc--ccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERK--ATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
|.++++||||+|||+|++|++++++ ++ +++|.+.|++++++||+|++|++++|+|.+
T Consensus 338 ~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~ 396 (399)
T PLN03171 338 RRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASG 396 (399)
T ss_pred HHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhccc
Confidence 8899999999999999999999876 53 566533389999999999999999999954
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-56 Score=437.36 Aligned_cols=355 Identities=40% Similarity=0.639 Sum_probs=298.0
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccc--hhhhhhCCCccCCCCCChHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLT--EEILKENPNMCCYNAPSLDA 88 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~--~~~~~~~~~~~~~~~~~~~~ 88 (390)
.++|.|+|+++|+++++|+++.+.+.........+..+++..++++++||++||++.+ ++... ......|++++
T Consensus 1 ~~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~----~~~~~~~~~~~ 76 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYA----PRPEMSPSLDE 76 (361)
T ss_pred CcEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcC----CccccCCCcCc
Confidence 3689999999999999999999987432211001223455688999999999999987 33210 01113478999
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeec-cccchHHHHHH
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN-QGCYMGGTVIR 167 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~C~~~~~al~ 167 (390)
|+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.+|+++||+++... +++++ +||+|++.||+
T Consensus 77 ~~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~-~~dv~~~~C~~~~~al~ 155 (361)
T cd00831 77 RNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVK-RYNLGGMGCSAGAIALD 155 (361)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccc-hhccccccchhHHHHHH
Confidence 99999999999999999999999999999999999999988889999999999999986443 78998 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCC
Q 036844 168 LAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTE 247 (390)
Q Consensus 168 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 247 (390)
+|..++++++.++||||++|.+|..+ ++.+ +++...+.++|||||+|+||++++.........+++.+.....+|.+.
T Consensus 156 ~A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (361)
T cd00831 156 LAKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSE 233 (361)
T ss_pred HHHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCC
Confidence 99999999999999999999998744 4433 234445679999999999999877521111234566655555677776
Q ss_pred CceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccC--CCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 248 NYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI--GISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 248 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
+.+.|.....++.+.+++++++.+.+.++++++++|+++ |++. +|| +|++||+|+++++.+++.||++++++..+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~ 312 (361)
T cd00831 234 DAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASR 312 (361)
T ss_pred CceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHH
Confidence 667777666677777888999999999999999999999 9996 999 999999999999999999999999998777
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeee
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
+++++||||+|||+|++|++++++ |++++| |+|++++||+|++|+++++
T Consensus 313 ~~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 313 MVLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 899999999999999999999998 889999 9999999999999999985
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-56 Score=401.61 Aligned_cols=351 Identities=30% Similarity=0.490 Sum_probs=313.3
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhh-cCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICE-RQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
..|.|+++++|++++.|.|+.+.|..+...+. .+.+.+.+. +.+|++|+++.|.+++.+. +++.+||
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~~----~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~--------~~f~ekN 69 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQEG----REDIPRVLHANAQINRRHLVLPLDWYREP--------HGFGEKN 69 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhccccc----hHHHHHHHhhccccccceecccHhhccCC--------CChhhhh
Confidence 47999999999999999999888765443322 234455565 7899999999999975443 4789999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++|.+.+..+.++|.++||+.+++.|+|||+|+++|+|+...|++..++.++||+++++.|......||++++.+|..|+
T Consensus 70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~ 149 (356)
T COG3424 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR 149 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.|+++.|..+|||||.|.||.+|.. .|+..++.+...+||||++|+|++.+....+.......+.+..++++|++++.|
T Consensus 150 ~y~ra~P~~~vlvV~vELCSLt~~~-~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~M 228 (356)
T COG3424 150 DYCRAAPDANVLVVCVELCSLTYVF-ADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIM 228 (356)
T ss_pred HHHhhCccceEEEEEeeeeeeeeec-CCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccccCCcccccc
Confidence 9999999999999999999987753 344455788899999999999999865412222334667777788899999999
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+.+.|+.+.++++++..+-.++...+..+|..++++. +|| .|+.|++++++++++.+.||+++++...+|+++++
T Consensus 229 gwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~~ 307 (356)
T COG3424 229 GWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLRE 307 (356)
T ss_pred ceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999996 999 99999999999999999999999999999999999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
||||+||++++.|.+.+++ + .++| ++.+++++|+||+.+.+|++|.+
T Consensus 308 ~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 308 YGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred hCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeec
Confidence 9999999999999999997 4 6778 89999999999999999999975
|
|
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-53 Score=410.33 Aligned_cols=316 Identities=20% Similarity=0.235 Sum_probs=256.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.. ...+ ....+++++++||++||++.+++
T Consensus 7 ~~~I~~~g~~lP~~~v~~~~~~~~~---~~~~-----~~~~~~i~~~~Gi~~R~~~~~~e-------------------- 58 (353)
T PRK12880 7 KAKISGICVSVPEHKICIDDELESV---FSND-----IKTLKRMKKVIGLNTRYICDENT-------------------- 58 (353)
T ss_pred ccEEEEEEEECCCeEecHHHHHHHh---cCcc-----hhhhhhhhhccCceEEEeCCCCC--------------------
Confidence 5899999999999999999754432 1111 11246788899999999997665
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
.+.+|+++|+++||+++|++++|||+||++|++| +..|+++.+|+++||+++++. ++|+++||+|++.||++|
T Consensus 59 -----~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~-~~di~~~C~g~~~aL~~A 132 (353)
T PRK12880 59 -----CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTI-AFDLGQACAGYLYGLFVA 132 (353)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCce-EEehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999998 999999999999999986553 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
+.++++|+.+ ||||++|.+|..+ +|.+ +.+..+|||||+|+||++++. .. ..+++...+. ..+|.
T Consensus 133 ~~~i~~~~~~-~LVv~~e~~S~~~-~~~d-----~~~~~lFGDGAaA~vl~~~~~-~~---~~~~~~~~~~~~~~~~~p~ 201 (353)
T PRK12880 133 HSLIQSGLGK-ILLICGDTLSKFI-HPKN-----MNLAPIFGDGVSATLIEKTDF-NE---AFFELGSDGKYFDKLIIPK 201 (353)
T ss_pred HHHHHcCCCC-EEEEEehhhhccC-Cccc-----CCceeeecccceEEEEEecCC-CC---ceEEEEecCCCCCeEEecC
Confidence 9999999888 9999999999744 5543 234789999999999997654 11 1234444332 23444
Q ss_pred CCCc-eeeEeec-----------ceeEE-EeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHH
Q 036844 246 TENY-ITGQLKE-----------MGIYG-HLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEK 311 (390)
Q Consensus 246 ~~~~-~~~~~~~-----------~g~~~-~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~ 311 (390)
+... ..|.... ....+ +.++.+|+++.+.++++++++|+++|++. +|| +|++||+|+++++.+.+
T Consensus 202 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i~~ 280 (353)
T PRK12880 202 GAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCIKE 280 (353)
T ss_pred CCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHH
Confidence 3221 1111100 01122 33799999999999999999999999996 999 99999999999999999
Q ss_pred HcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 312 ~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+||+|++|+... ++++|||++|||+|++|++++++ |+ -+++|++||+|++||++++||.+.
T Consensus 281 ~Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~ 341 (353)
T PRK12880 281 ELKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDL 341 (353)
T ss_pred HhCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCc
Confidence 999999998643 58999999999999999999876 43 358999999999999999999654
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-53 Score=407.98 Aligned_cols=313 Identities=20% Similarity=0.208 Sum_probs=256.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e-------------------- 50 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDE-------------------- 50 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCC--------------------
Confidence 57899999999999999999988652 11 36788999999999997766
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
++.+|+++|+++||+++|++++|||+||++|+++ +..|+.+.+|+++||+++.. +++++++|+|++.||++|
T Consensus 51 -----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A 123 (326)
T PRK05963 51 -----TLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLA 123 (326)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHH
Confidence 3899999999999999999999999999999999 89999999999999998765 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeee----eecC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQ----TTIP 244 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~p 244 (390)
.++++++ .++||||++|.++. +.++.+ +.+.++|||||+|+||++++.. .++. ...+.+.+. ..+|
T Consensus 124 ~~~l~~~-~~~aLVv~~d~~s~-~~~~~~-----~~~~~lfGDgA~A~ll~~~~~~~~~~l--~~~~~t~~~~~~~~~~~ 194 (326)
T PRK05963 124 DGFVRAQ-GKPVLVVAANILSR-RINMAE-----RASAVLFADAAGAVVLAPSAKANSGVL--GSQLISDGSHYDLIKIP 194 (326)
T ss_pred HHHHHcC-CCeEEEEEechhhc-cCCccc-----cCceEEEeecceEEEEEecCCCCCceE--EEEEEEcCCCCCeEEeC
Confidence 9999987 48999999999886 334432 3357899999999999987641 1111 112222111 0123
Q ss_pred CCCCceeeE--eecce--eEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCccc
Q 036844 245 DTENYITGQ--LKEMG--IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDK 319 (390)
Q Consensus 245 ~~~~~~~~~--~~~~g--~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~ 319 (390)
.......+. ..... +.+..++.++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|
T Consensus 195 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~k 273 (326)
T PRK05963 195 AGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRAK 273 (326)
T ss_pred CCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHHH
Confidence 221111110 01111 12223677888888999999999999999997 999 9999999999999999999999999
Q ss_pred chhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 320 LWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 320 ~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.. ++++||||++||+|++|++++++ +++++| |+|+++++|+|++|+++++||
T Consensus 274 ~~~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 274 AAS---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred hhh---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 876 59999999999999999999987 889999 999999999999999999997
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-52 Score=407.44 Aligned_cols=314 Identities=22% Similarity=0.273 Sum_probs=255.8
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
++|.|+|+|+|+++++|+++.+.++ .. ..++.+++||++||++.+++.
T Consensus 48 ~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~~-------------------- 95 (379)
T PLN02326 48 SKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDET-------------------- 95 (379)
T ss_pred cEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCCC--------------------
Confidence 7999999999999999999988652 11 367899999999999977663
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ 171 (390)
..+|+.+|+++||+++|++++|||+||++++++...++.+..|++.||+++.. +++++++|+|++.||++|..
T Consensus 96 -----~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~aL~~A~~ 168 (379)
T PLN02326 96 -----LTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLGLVTAAR 168 (379)
T ss_pred -----HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHHHHHHHH
Confidence 89999999999999999999999999999988844456789999999998654 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee----ec--CC
Q 036844 172 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT----TI--PD 245 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~--p~ 245 (390)
++++|..++||||++|.++. +.++.+ +....+|||||+|+||++++. .......+.+.+.+.. .. +.
T Consensus 169 ~l~~g~~~~vLVv~~e~~s~-~~~~~d-----~~~~~lfGDGAaAvlL~~~~~-~~~~i~~~~~~t~g~~~~~~~~~~~g 241 (379)
T PLN02326 169 FIRGGGYKNVLVIGADALSR-YVDWTD-----RGTCILFGDGAGAVVLQACDD-DEDGLLGFDMHSDGNGHKHLHATFKG 241 (379)
T ss_pred HHHcCCCCEEEEEEechhcC-CCCccc-----cCceEEEcceeEEEEEEEcCC-CCCceEEEEEEEcCCCCCeEEecCCC
Confidence 99999999999999999986 444443 234579999999999998764 2100012233322110 01 11
Q ss_pred CC---------CceeeEeeccee-EEEe-CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHc
Q 036844 246 TE---------NYITGQLKEMGI-YGHL-SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNL 313 (390)
Q Consensus 246 ~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~l 313 (390)
.. ....+.....++ .+.+ ++++|+++.+.++++++++|+++|+++ +|| +|++||+|+++++.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~L 320 (379)
T PLN02326 242 EDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIIDAVAQRL 320 (379)
T ss_pred CcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHc
Confidence 10 000111111122 1333 688999989999999999999999996 999 9999999999999999999
Q ss_pred CCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 314 GLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 314 gi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
|+|++|+..+ +++||||+|||+|++|++++++ |++++| |+||+++||+|++|++++++|
T Consensus 321 gl~~ek~~~~---l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 321 GIPPEKVISN---LANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred CCCHHHeeec---HhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 9999999764 8999999999999999999998 889999 999999999999999999997
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-52 Score=399.44 Aligned_cols=317 Identities=20% Similarity=0.229 Sum_probs=257.5
Q ss_pred CCCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHH
Q 036844 9 RPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDA 88 (390)
Q Consensus 9 ~~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~ 88 (390)
+++++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++. ++
T Consensus 2 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~------------------ 50 (329)
T PRK07204 2 KRYISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GE------------------ 50 (329)
T ss_pred CCCcEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CC------------------
Confidence 3568999999999999999999988642 11 26788999999999986 44
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIR 167 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~ 167 (390)
+..+|+.+|++++|+++|++++|||+||++++++ +..|+++.+|+++||+++...++++++++|+|++.||+
T Consensus 51 -------~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~ 123 (329)
T PRK07204 51 -------TSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALD 123 (329)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHH
Confidence 2899999999999999999999999999999988 67899999999999998631128999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eec
Q 036844 168 LAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTI 243 (390)
Q Consensus 168 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~ 243 (390)
+|..++++|..++||||++|.++..+ ++.+ ..+.++|||||+|+||++++...++. ...+...+. ..+
T Consensus 124 ~a~~~l~~g~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~lfGDGAaA~ll~~~~~~~~il--~~~~~t~~~~~~~~~~ 195 (329)
T PRK07204 124 TISYAIECGRYKRVLIISSEISSVGL-NWGQ-----NESCILFGDGAAAVVITKGDHSSRIL--ASHMETYSSGAHLSEI 195 (329)
T ss_pred HHHHHHHCCCCCEEEEEEeccccCCC-Cccc-----CcceEEEecccEEEEEEEcCCCCcEE--EEEEEEecCCCCceEE
Confidence 99999999999999999999988633 3322 22468999999999999876522211 111111110 011
Q ss_pred CCCCCc----eeeEeecceeEEEe-CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 244 PDTENY----ITGQLKEMGIYGHL-SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 244 p~~~~~----~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
|..... ..+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.|++|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~~ 274 (329)
T PRK07204 196 RGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVDE 274 (329)
T ss_pred ecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCH
Confidence 111100 01111222333333 688999999999999999999999997 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+++.. ++++||||++||+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 275 e~~~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 275 ERFVT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHhhh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 99875 59999999999999999999998 889999 999999999999999999986
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-50 Score=396.26 Aligned_cols=361 Identities=20% Similarity=0.257 Sum_probs=280.4
Q ss_pred CCCC-CeEEEEeeecCCCC--ccccCcHHHHHHHh----cCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCcc
Q 036844 7 NQRP-AATILAVGTATPPN--CFYQADYPDFYFRA----TNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMC 79 (390)
Q Consensus 7 ~~~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~ 79 (390)
-.|| ++|++..++|.|+. +++.+.+.+.+... ...+..++..+..+||.+++||++|++..+...
T Consensus 62 ~~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~-------- 133 (478)
T PLN02932 62 MTRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQ-------- 133 (478)
T ss_pred hcCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccc--------
Confidence 4578 79999999999887 68888888876432 122222233577899999999999998844321
Q ss_pred CCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeec-cc
Q 036844 80 CYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN-QG 158 (390)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~ 158 (390)
..+++++++.+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||++.+.. +++++ +|
T Consensus 134 ---~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~-~fdL~gmG 209 (478)
T PLN02932 134 ---CLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK-SLNLGGMG 209 (478)
T ss_pred ---cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce-EEEeccch
Confidence 12478899999999999999999999999999999999999999999999999999999999986654 89998 89
Q ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEee
Q 036844 159 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC 238 (390)
Q Consensus 159 C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 238 (390)
|+|++.||++|+.++++++.++||||++|.+|..+ ++.+ +++...+.++|||||+|+||+.++. .. ....+++...
T Consensus 210 CSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~-~~-~~~~~~L~~~ 285 (478)
T PLN02932 210 CSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSR-DR-KRAKYELVHT 285 (478)
T ss_pred hhhHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEecccc-cc-cCcceEEEee
Confidence 99999999999999999999999999999999755 4543 2445568899999999999998653 11 1134666644
Q ss_pred eeee---cCCCCCceeeEeeccee-EEEeCCcchHHHHHhHHHHH----------------------HHhhcc--CCCCC
Q 036844 239 TQTT---IPDTENYITGQLKEMGI-YGHLSLDVPVAIGKYIGKCL----------------------SNAMSP--IGISD 290 (390)
Q Consensus 239 ~~~~---~p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~--~gl~~ 290 (390)
...+ .+.+.+.+.+..+++|. .+.++++++..+.+.++..+ +++++. .++.+
T Consensus 286 v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~ 365 (478)
T PLN02932 286 VRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIP 365 (478)
T ss_pred eeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcH
Confidence 3332 23333334444434553 45566666655443333211 112211 12221
Q ss_pred --CCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEE
Q 036844 291 --WNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLF 367 (390)
Q Consensus 291 --~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~ 367 (390)
.++| +|++||+|+++++.+++.||++++++..++.++++||||+|+|+++.|+++.++ |++++| |+|+++
T Consensus 366 ~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~i 438 (478)
T PLN02932 366 DFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQI 438 (478)
T ss_pred hHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEE
Confidence 1457 999999999999999999999998887777889999999999999999999877 899999 999999
Q ss_pred EEcccccceeeeeEeecC----CCCCC
Q 036844 368 GCGPGLTVETVVLQSFPI----DSTNW 390 (390)
Q Consensus 368 ~~G~G~~~ga~ll~~~~~----~~~~~ 390 (390)
+||+|++|++++||...+ ..+||
T Consensus 439 aFGsGf~~~s~vw~~~~~~~~~~~~~w 465 (478)
T PLN02932 439 ALGSGFKCNSSVWVALRNVKPSANNPW 465 (478)
T ss_pred EEeccHHHHHHHHHHhcCCCCcCCCCc
Confidence 999999999999998765 34788
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-51 Score=392.44 Aligned_cols=313 Identities=24% Similarity=0.278 Sum_probs=253.6
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
++|.|+|+|+|+++++|+|+++.++ .. ..+|.+++||++||++.+++
T Consensus 3 v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~--------------------- 49 (326)
T CHL00203 3 VHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSST--------------------- 49 (326)
T ss_pred cEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCC---------------------
Confidence 6899999999999999999988752 11 25688999999999987766
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ 171 (390)
+..+|+.+|+++||+++|++++|||.||++++++...+..+..+++.||+.+.+ +++++++|+|++.||++|..
T Consensus 50 ----~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~~ 123 (326)
T CHL00203 50 ----SLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTATQ 123 (326)
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHHH
Confidence 389999999999999999999999999999888833345678999999998765 79999999999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee----ecCCCC
Q 036844 172 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT----TIPDTE 247 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~p~~~ 247 (390)
+|++|..+++|||++|.+|..+ ++.+ ....++|||||+|+||++.+. .++. .+.+...+.. ..+...
T Consensus 124 ~i~sg~~~~~Lvv~~e~~s~~~-~~~~-----~~~~~~fgDga~A~ll~~~~~-~~~~--~~~~~t~g~~~~~~~~~~~~ 194 (326)
T CHL00203 124 FIQNGSYKNILVVGADTLSKWI-DWSD-----RKTCILFGDGAGAAIIGASYE-NSIL--GFKLCTDGKLNSHLQLMNKP 194 (326)
T ss_pred HHHcCCCCEEEEEEehhhhCcC-Cccc-----CCceEEEcceeeEEEEEEcCC-CCeE--EEEEEEcCCCcceEEecCCC
Confidence 9999999999999999998633 4443 224689999999999998665 3221 1222222110 111000
Q ss_pred ---CceeeE-eeccee-EE-EeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccc
Q 036844 248 ---NYITGQ-LKEMGI-YG-HLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKL 320 (390)
Q Consensus 248 ---~~~~~~-~~~~g~-~~-~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~ 320 (390)
...... .....+ .+ ..+++++.+..+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k~ 273 (326)
T CHL00203 195 VNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSKM 273 (326)
T ss_pred CCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHh
Confidence 000000 000111 12 23777888888889999999999999996 999 99999999999999999999999999
Q ss_pred hhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 321 WASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 321 ~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
.. ++++|||++||++|++|++++++ |++++| |+|+++++|+|++|+++++||+
T Consensus 274 ~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 274 IT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 76 59999999999999999999988 889999 9999999999999999999995
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-50 Score=390.56 Aligned_cols=315 Identities=20% Similarity=0.239 Sum_probs=256.6
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++++|+.+.++ .. .+++++++||++||++.+++
T Consensus 4 ~~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~-------------------- 51 (325)
T PRK12879 4 YARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEE-------------------- 51 (325)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCC--------------------
Confidence 68999999999999999999988642 11 25688899999999997766
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+..+|+.+|+++||+++|+++++||+||++++++ +..|+.+.+|++.||+++.. +++++++|+|++.||.+|
T Consensus 52 -----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~A 124 (325)
T PRK12879 52 -----YTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLETA 124 (325)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHHH
Confidence 3899999999999999999999999999999988 88899999999999998654 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..+|++|..++||||++|.++. +.++.+ +...++|||||+|+||++++...++. ...+...+. ...+.
T Consensus 125 ~~~l~~g~~~~~Lvv~~e~~s~-~~~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 196 (325)
T PRK12879 125 NGLITSGLYKKVLVIGAERLSK-VTDYTD-----RTTCILFGDGAGAVVLEATENEPGFI--DYVLGTDGDGGDILYRTG 196 (325)
T ss_pred HHHHHcCCCCEEEEEEehhhcC-cCCccc-----cCceEEEeecceEEEEEecCCCCCeE--EEEEEEcCCCCCeEEEcC
Confidence 9999999999999999999885 333332 22468999999999999977512210 011111110 01111
Q ss_pred CCCceeeEeecceeEEE-eCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 246 TENYITGQLKEMGIYGH-LSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 246 ~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
............+..+. .+++++..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~~- 274 (325)
T PRK12879 197 LGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTLV- 274 (325)
T ss_pred CCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhhh-
Confidence 11000000001112222 3678888888899999999999999997 999 9999999999999999999999999886
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
++++|||+++||+|++|++++++ |++++| |+++++++|+|++|+++++||+
T Consensus 275 --~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 275 --SVEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred --hHhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence 48999999999999999999988 889999 9999999999999999999994
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-50 Score=391.29 Aligned_cols=323 Identities=17% Similarity=0.158 Sum_probs=257.7
Q ss_pred CCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHH
Q 036844 10 PAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDAR 89 (390)
Q Consensus 10 ~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 89 (390)
++++|.|+|+|+|+++++|+++.+.+.+..... . ....++.+.+||++||+..+++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~---~--~~~~~i~~~~Gi~~R~~~~~~~------------------- 59 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERL---R--LPPGQLEALTGIRERRWWPEGT------------------- 59 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhccccc---C--CChhHhhhhcCceeEecCCCCC-------------------
Confidence 469999999999999999999998764322100 0 0125677889999999986544
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 036844 90 QAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRL 168 (390)
Q Consensus 90 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~ 168 (390)
++.+|+.+|+++||+++|+++++||+||++++++ +..|+++.+|+++||+++... +++++++|+|++.||++
T Consensus 60 ------~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~~~~~al~~ 132 (338)
T PRK09258 60 ------QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCA-NFDVSNACLGFLNGMLD 132 (338)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhHHHHHHHHH
Confidence 3899999999999999999999999999999987 889999999999999986433 78999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCC------ccc----hhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEee
Q 036844 169 AKDIAENNPGARVLVVCSDIRVLDFHEPS------ETH----LDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC 238 (390)
Q Consensus 169 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~------~~~----~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 238 (390)
|..+|++|..++||||++|.++..+ ++. +.. ....+...+|||||+|+||++++.... ..++...
T Consensus 133 A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~----~~~~~~~ 207 (338)
T PRK09258 133 AANMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR----GHRLLGG 207 (338)
T ss_pred HHHHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC----cceeeee
Confidence 9999999999999999999987532 211 100 111223578999999999998654111 1234332
Q ss_pred eeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 239 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
.....+...+.+.|. .......++.+++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+
T Consensus 208 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~~ 283 (338)
T PRK09258 208 VTRAATEHHELCQGG---RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGIDP 283 (338)
T ss_pred eeecCCCcccccccC---ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCCH
Confidence 222233322222221 1111123566777778888899999999999996 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+|+..+ +++||||+++|+|++|++++++ |++++| |+|+++++|+|++|+++++||
T Consensus 284 ~k~~~~---~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 284 EKVFTT---FPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHceeh---HhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 999875 8999999999999999999988 889999 999999999999999999997
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-49 Score=378.90 Aligned_cols=307 Identities=24% Similarity=0.286 Sum_probs=254.8
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++++++.+.++ .. .+++++++||++||++.+++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~---~~---------~~~~~~~~Gi~~r~~~~~~~-------------------- 48 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLD---TS---------DEWIRTRTGIRERRIADPGE-------------------- 48 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcC---CC---------HHHhhhccCceEEeeCCCCC--------------------
Confidence 57899999999999999999988751 11 35678899999999997765
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
++.+|+.+|++++|+++|+++++||.||++++++ +..|+.+.+|++.||+++.+ +++++++|++++.||.+|
T Consensus 49 -----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A 121 (320)
T cd00830 49 -----TTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTA 121 (320)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHH
Confidence 3899999999999999999999999999999988 67899999999999998554 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..++++|+.++||||++|.++..+ ++.+ ....++|||||+|+||++++...+ +........+...+.
T Consensus 122 ~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~-------i~~~~~~~~~~~~~~ 188 (320)
T cd00830 122 AGLIRSGGAKNVLVVGAETLSRIL-DWTD-----RSTAVLFGDGAGAVVLEATEEDPG-------ILDSVLGSDGSGADL 188 (320)
T ss_pred HHHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEecCCCCc-------EEEEEEEEcCCCCCe
Confidence 999999999999999999988633 3322 235789999999999998765111 221111122222222
Q ss_pred eeeEe----------ecce-eEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 250 ITGQL----------KEMG-IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 250 ~~~~~----------~~~g-~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
+.+.. ...+ +....++.+++.+.+.++++++++|+++|+++ +|| +|++||+|+++++.+++.||+|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~ 267 (320)
T cd00830 189 LTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPE 267 (320)
T ss_pred EEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCH
Confidence 21110 0111 22334788888888899999999999999997 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeee
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
+|+.. ++++|||+++||+|++|++++++ |++++| |+++++++|+|++|+++++
T Consensus 268 ~~~~~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 268 EKVVV---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHhhh---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence 99875 59999999999999999999998 889999 9999999999999999875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=379.88 Aligned_cols=358 Identities=17% Similarity=0.221 Sum_probs=269.0
Q ss_pred CCC-CeEEEEeeecCCCC--ccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCC
Q 036844 8 QRP-AATILAVGTATPPN--CFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAP 84 (390)
Q Consensus 8 ~~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~ 84 (390)
.|| ++|++..++|.|+. +++.+.+.+...... . -.++..+...++.+++||.+ +...|.... ..
T Consensus 93 ~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~f~~ri~~~sgig~-~t~~p~~~~----------~~ 159 (502)
T PLN02377 93 TRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTG-D-FDDSSLEFQRKILERSGLGE-DTYVPEAMH----------YI 159 (502)
T ss_pred cCCCCEEEEeeeeecCCccccccHHHHHHHHHHhC-C-CCHHHHHHHHHHHHhcCCCC-ccccCchhc----------cC
Confidence 567 79999999999886 688999988875332 1 11334566789999999987 455553321 02
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeec-cccchH
Q 036844 85 SLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYN-QGCYMG 162 (390)
Q Consensus 85 ~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~C~~~ 162 (390)
+.+.+++.+.+.+.+++.+|+++||+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. +++++ +||+|+
T Consensus 160 ~~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~-afdL~gmGCsgg 237 (502)
T PLN02377 160 PPRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIR-SFNLGGMGCSAG 237 (502)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCe-EEecccchhhHH
Confidence 3456899999999999999999999999999999999987 7888 789999999999999996654 89998 799999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCcccc-ceeEEEeeeee
Q 036844 163 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHER-TLFQVLSCTQT 241 (390)
Q Consensus 163 ~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~-~~~~~~~~~~~ 241 (390)
+.||++|+.++++++.++||||++|.+|..+ ++.| ++.....+++|||||+|+||++.+......+ ..+.++.....
T Consensus 238 l~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~ 315 (502)
T PLN02377 238 VIAVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGN-KKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRG 315 (502)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEecccccc-CCCC-CccccccceeeccccEEEEEecccccccccccccceEEEEEEE
Confidence 9999999999999999999999999999754 3444 2333445799999999999998543111000 11123333222
Q ss_pred ecCCCCCceeeEeecce-eEEEe-------------------CCcc-------hHHHHHhHHHHHHHhhccCC-CCCCCc
Q 036844 242 TIPDTENYITGQLKEMG-IYGHL-------------------SLDV-------PVAIGKYIGKCLSNAMSPIG-ISDWNS 293 (390)
Q Consensus 242 ~~p~~~~~~~~~~~~~g-~~~~~-------------------~~~v-------~~~~~~~~~~~i~~~L~~~g-l~~~~d 293 (390)
..+...+.+.+..++.| ..+.+ ++.+ +.++...+++.+++.++..+ ... ++
T Consensus 316 ~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~d 394 (502)
T PLN02377 316 ADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-LA 394 (502)
T ss_pred EcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-hh
Confidence 22222222221111111 11111 2222 22444556666776776554 343 77
Q ss_pred e-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEccc
Q 036844 294 L-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPG 372 (390)
Q Consensus 294 i-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G 372 (390)
+ +|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++ |++++| |+|++++||+|
T Consensus 395 idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsG 467 (502)
T PLN02377 395 FDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSG 467 (502)
T ss_pred cCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEccc
Confidence 8 999999999999999999999987666677789999999999999999999987 999999 99999999999
Q ss_pred ccceeeeeEeecC----CCCCC
Q 036844 373 LTVETVVLQSFPI----DSTNW 390 (390)
Q Consensus 373 ~~~ga~ll~~~~~----~~~~~ 390 (390)
++|+++++||..+ ..+||
T Consensus 468 f~~~s~v~~~~~~~~~~~~~~w 489 (502)
T PLN02377 468 FKCNSAVWEALRHVKPSNNSPW 489 (502)
T ss_pred cEeeeEEEEEecCCCCCCCCCc
Confidence 9999999999766 44798
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-48 Score=375.17 Aligned_cols=311 Identities=23% Similarity=0.272 Sum_probs=257.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
.++|.++|+|+|+++++++++.+.++ .+ ..++++++||++||++.+++
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~-------------------- 49 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVD---TS---------DEWIVTRTGIKERRIAADDE-------------------- 49 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcC---Cc---------hHHeecccCceEEEECCCCC--------------------
Confidence 47899999999999999999988752 11 24578889999999997766
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
++.+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.++++.||+++.+ +++++++|++++.||++|
T Consensus 50 -----~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A 122 (318)
T TIGR00747 50 -----TSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVA 122 (318)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999988 77899999999999998754 788999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..++++|..+++||+++|..+. +.++.+ .....+|||||+|+||++++...++ ..+.+...+. ..+|.
T Consensus 123 ~~~i~~g~~~~~Lvv~~e~~~~-~~~~~~-----~~~~~~~GDGAaA~lL~~~~~~~~i--~~~~~~~~~~~~~~~~~~~ 194 (318)
T TIGR00747 123 KQYIESGKYKTVLVVGAEKLSS-TLDWTD-----RGTCVLFGDGAGAVVLGESEDPGGI--ISTHLGADGTQGEALYLPA 194 (318)
T ss_pred HHHHHcCCCCEEEEEEehhhcC-cCCcCC-----CCeEEEEecceeEEEEeecCCCCcE--EEEEEEEcCCCcceEEECC
Confidence 9999999999999999999875 333332 1235789999999999997751111 1122222211 11232
Q ss_pred CCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 246 TENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
.... .....++....+.++++...+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|++|+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~-- 268 (318)
T TIGR00747 195 GGRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVK-- 268 (318)
T ss_pred CCcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeee--
Confidence 2111 01112333444778888888889999999999999997 999 9999999999999999999999999986
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++++||||++||+|++|++++++ |++++| |+|+++++|+|++|+++++||
T Consensus 269 -~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 269 -TVHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred -hHhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence 49999999999999999999998 889999 999999999999999999997
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-48 Score=374.03 Aligned_cols=317 Identities=16% Similarity=0.149 Sum_probs=245.5
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|.|+|+++++|+++.+.++ .+ .+++.+++||++||++.+++
T Consensus 4 ~v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~-------------------- 51 (339)
T PRK06840 4 NVGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPED-------------------- 51 (339)
T ss_pred ceEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCC--------------------
Confidence 79999999999999999999988652 11 25677889999999997655
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecC-C-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFY-G-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRL 168 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~-~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~ 168 (390)
+..+|+.+|++++|+++|++++|||+||+++++ + +..|+++.+|+++||+++.. +++++++|+|++.||++
T Consensus 52 -----~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~~ 124 (339)
T PRK06840 52 -----HTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALKV 124 (339)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHHH
Confidence 389999999999999999999999999987654 4 67899999999999998654 78999999999999999
Q ss_pred HHHHHHc-CCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eec
Q 036844 169 AKDIAEN-NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTI 243 (390)
Q Consensus 169 A~~ll~~-g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~ 243 (390)
|.+++++ +..+++|||++|..+. +.++.+. ... ..++|||||+|+||++++...++. ...+.+.+. ..+
T Consensus 125 A~~~l~~~g~~~~~Lvv~~~~~s~-~~~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~il--~~~~~t~~~~~~~~~~ 198 (339)
T PRK06840 125 AKDLLYSDPSIENVLLVGGYRNSD-LVDYDNP--RTR-FMFNFAAGGSAALLKKDAGKNRIL--GSAIITDGSFSEDVRV 198 (339)
T ss_pred HHHHHhcCCCccEEEEEeeccccc-ccCcCCC--Cee-eeccCCCceeEEEEEecCCCCceE--EEEEEEcCCccceEEe
Confidence 9999999 7789999999999875 3333221 110 113479999999999876511110 011111111 111
Q ss_pred CCCC--CceeeEeecce-eEEEe-CCcchHH-----HHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHc
Q 036844 244 PDTE--NYITGQLKEMG-IYGHL-SLDVPVA-----IGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNL 313 (390)
Q Consensus 244 p~~~--~~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~l 313 (390)
|... ........+.+ +.+.+ +++.+.. ....++++++++|+++|+++ +|| +|++||.|.++++.+++.|
T Consensus 199 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~L 277 (339)
T PRK06840 199 PAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLEGL 277 (339)
T ss_pred cCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHHHc
Confidence 2111 00000000111 12222 3444442 23457789999999999997 999 9999999999999999999
Q ss_pred CCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 314 GLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 314 gi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
|+|++|+. ++++||||++||+|++|++++++ |++++| |+++++++|+|++|+++++||.+
T Consensus 278 gl~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 278 GLTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred CCCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecC
Confidence 99999985 38999999999999999999987 889999 99999999999999999999964
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-47 Score=375.80 Aligned_cols=358 Identities=17% Similarity=0.250 Sum_probs=267.8
Q ss_pred CCCC-CeEEEEeeecCCCC--ccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC
Q 036844 7 NQRP-AATILAVGTATPPN--CFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA 83 (390)
Q Consensus 7 ~~~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~ 83 (390)
..|| ++|++..++|.|+. +++.+.+.+.+.... . -.++..+...++.+++|+.+..+..+.-. . .
T Consensus 108 ~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~f~~~~~~~sg~g~~ty~P~~~~-~---------~ 175 (521)
T PLN02854 108 AKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENG-S-FEDETVQFQRRISTRSGLGDETYLPRGIT-S---------R 175 (521)
T ss_pred HcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcC-C-CCHHHHHHHHHHHHhcCCCCccccCcccc-C---------C
Confidence 4678 79999999999886 688998888874331 1 12334567889999999998876643321 0 1
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeec-cccch
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYN-QGCYM 161 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~C~~ 161 (390)
| .+..++...+.+......|++++|+++|++|+|||+||++ |++ +..|+++.+|+++||++.+.. +++++ +||+|
T Consensus 176 ~-~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i~-afdLsgmGCSg 252 (521)
T PLN02854 176 P-PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDIK-SYNLGGMGCSA 252 (521)
T ss_pred C-CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCce-EEecccchhhh
Confidence 1 2235677778889999999999999999999999999975 667 789999999999999986654 89997 89999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee
Q 036844 162 GGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241 (390)
Q Consensus 162 ~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
++.||++|+.++++++.++||||++|.+|.++..-+ +++...+.++|||||+|+||++.+...+ ...+++......
T Consensus 253 gl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~--Drs~lv~~~LFgDGAAAvlLs~~~~~~~--~~k~~L~~~v~t 328 (521)
T PLN02854 253 GLISIDLANDLLKANPNSYAVVVSTENITLNWYFGN--DRSMLLCNCIFRMGGAAVLLSNKARDRK--RSKYQLVHTVRT 328 (521)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCC--chhhhcceeeeccceeEEEEeccccccc--ccchheeeEEEE
Confidence 999999999999999999999999999985442112 2444455899999999999998653111 122333322111
Q ss_pred ec---CCCCCceeeEeeccee-EE-------------------EeCCcchHHHHHh--HHHHHHHhhccCCCCCC-----
Q 036844 242 TI---PDTENYITGQLKEMGI-YG-------------------HLSLDVPVAIGKY--IGKCLSNAMSPIGISDW----- 291 (390)
Q Consensus 242 ~~---p~~~~~~~~~~~~~g~-~~-------------------~~~~~v~~~~~~~--~~~~i~~~L~~~gl~~~----- 291 (390)
++ +...+.+.+..+..|. .+ +.++.++...... +..++++.|.++|+++.
T Consensus 329 ~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~ 408 (521)
T PLN02854 329 HKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFK 408 (521)
T ss_pred EEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCccc
Confidence 11 2222222111111121 01 1244444333222 45678899999998841
Q ss_pred Cce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEc
Q 036844 292 NSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCG 370 (390)
Q Consensus 292 ~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G 370 (390)
.++ +|++||+|+++++.+++.||+++++...++.++++||||+|+|+++.|+++.++ |++++| |+|++++||
T Consensus 409 ~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFG 481 (521)
T PLN02854 409 LAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFG 481 (521)
T ss_pred ccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEc
Confidence 478 999999999999999999999965555555679999999999999999999987 999999 999999999
Q ss_pred ccccceeeeeEeecC------CCCCC
Q 036844 371 PGLTVETVVLQSFPI------DSTNW 390 (390)
Q Consensus 371 ~G~~~ga~ll~~~~~------~~~~~ 390 (390)
+|++|++++|||..+ ..+||
T Consensus 482 sGft~~sav~~~~~~~~~~~~~~~~w 507 (521)
T PLN02854 482 SGFKCNSAVWKALREIPTGESTGNPW 507 (521)
T ss_pred hhhhhhheeeEEeccCCccccCCCCc
Confidence 999999999999865 23788
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-48 Score=377.54 Aligned_cols=331 Identities=16% Similarity=0.193 Sum_probs=254.6
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.++... +. . ....+|+++++||++||++.+++. .+.
T Consensus 2 ~v~I~gig~~lP~~~v~n~~~~~~~~~~~--~~-~--~~~~~~i~~~~Gi~~R~~~~~~~~---~~~------------- 60 (378)
T PRK06816 2 NVYITSTGAFLPGEPVSNDEMEAYLGLIN--GK-P--SRARRIILRNNGIKTRHYALDPEG---RPT------------- 60 (378)
T ss_pred CeEEEeeeecCCCCccCHHHHHHHHhhcc--CC-c--HHHHHHHHHhCCCceEEEEECCCC---CCC-------------
Confidence 47899999999999999999988764322 11 1 112368999999999999875421 111
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
++..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|+++||+++.. +++++++|+|++.||++|
T Consensus 61 ----~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~A 134 (378)
T PRK06816 61 ----HSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKYA 134 (378)
T ss_pred ----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHHH
Confidence 13789999999999999999999999999999998 78899999999999998754 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccch----------------hhhhhhhhhccCcEEEEeccCCCCCcccccee
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHL----------------DVLVVQAVFGDGAGAAIIGAGPDISNHERTLF 233 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~----------------~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~ 233 (390)
..++++|..++||||++|.+|..+ ++.+.+. +....+++|||||+|+||++.+...+. .+
T Consensus 135 ~~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---~l 210 (378)
T PRK06816 135 YLSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---SL 210 (378)
T ss_pred HHHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc---eE
Confidence 999999999999999999998643 2221000 001124579999999999976651121 12
Q ss_pred EE--Eeeeee------ec-CCC-----CCceeeEee------cce-eEEE-eCCcchHHHHHhHHHHHHHhhccCCCCCC
Q 036844 234 QV--LSCTQT------TI-PDT-----ENYITGQLK------EMG-IYGH-LSLDVPVAIGKYIGKCLSNAMSPIGISDW 291 (390)
Q Consensus 234 ~~--~~~~~~------~~-p~~-----~~~~~~~~~------~~g-~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 291 (390)
.+ ....+. .. +.. .....|... .++ +.+. .++.+++.+...+++.++++|+++|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~- 289 (378)
T PRK06816 211 RIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLDP- 289 (378)
T ss_pred EEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCCh-
Confidence 21 111110 01 100 001122210 112 1122 2456777777788999999999999997
Q ss_pred Cce-eEEEcCCCHHHHHHHHHHc-----CCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEE
Q 036844 292 NSL-FYVLHPGGDGLIDQVEKNL-----GLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGV 365 (390)
Q Consensus 292 ~di-~~i~h~~~~~~~~~~~~~l-----gi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vl 365 (390)
+|| +|++||+|.++++.++++| |+|++|++. ++++||||++||+|++|++++++ |++++| |+|+
T Consensus 290 ~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~---~~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~vl 359 (378)
T PRK06816 290 DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFT---NLATVGNTGSASIYIMLDELLNS----GRLKPG---QKIL 359 (378)
T ss_pred hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEE---eccccccccchHHHHHHHHHHHc----CCCCCC---CEEE
Confidence 999 9999999999999999987 999999986 49999999999999999999998 999999 9999
Q ss_pred EEEEccc-ccceeeeeEee
Q 036844 366 LFGCGPG-LTVETVVLQSF 383 (390)
Q Consensus 366 l~~~G~G-~~~ga~ll~~~ 383 (390)
+++.|+| +++|.++|.|.
T Consensus 360 ~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 360 CFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEEecccchhheeEEEEEC
Confidence 9988776 99999999984
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-48 Score=374.19 Aligned_cols=304 Identities=17% Similarity=0.175 Sum_probs=243.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|.|+|+++++|+++.+.++ .+ .+|+.+++||++||++.++++
T Consensus 2 ~v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~~------------------- 50 (347)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDED------------------- 50 (347)
T ss_pred ceeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCcC-------------------
Confidence 47899999999999999999998752 11 367899999999999977663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
..+|+.+|+++||+++|++++|||+||++++++ +..|+.+.+|+++||+++... +++++++|+|++.||++|
T Consensus 51 ------~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~-~~dv~~~C~~~~~aL~~A 123 (347)
T PRK04262 51 ------TATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLT-AADLEFACKAGTAALQAA 123 (347)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHH
Confidence 899999999999999999999999999999988 788999999999999986443 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..++++|+.++||||++|.... +|.+ . ...+|||||+|+||++++. ..++.+.... .++..+.
T Consensus 124 ~~~i~sg~~~~aLVv~~e~~~~---~~~~-----~-~~~~~GDGA~A~ll~~~~~-------~~~i~~~~~~-~~d~~d~ 186 (347)
T PRK04262 124 MGLVKSGMIKYALAIGADTAQG---APGD-----A-LEYTAAAGGAAFIIGKEEV-------IAEIEATYSY-TTDTPDF 186 (347)
T ss_pred HHHHHcCCCCEEEEEEEeeecc---CCCC-----C-CCCcCCCCcEEEEEecCcc-------cceeeccccc-cccchhh
Confidence 9999999999999999998532 3332 1 1356899999999997543 1233322111 1111111
Q ss_pred ee---eEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHH
Q 036844 250 IT---GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRY 325 (390)
Q Consensus 250 ~~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~ 325 (390)
+. +.....+..+ ... ..+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+..++
T Consensus 187 ~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~- 260 (347)
T PRK04262 187 WRREGEPYPRHGGRF--TGE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL- 260 (347)
T ss_pred cCCCCCcCCCcCcee--cch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc-
Confidence 10 0001111111 111 1233578889999999999996 999 999999999999999999999999998653
Q ss_pred HHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 326 VLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 326 ~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
++++||||+|||+|++|++++++ +++| |+||+++||+|++|++++++|.+
T Consensus 261 ~~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 261 LTPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred hhhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence 47999999999999999999864 7889 99999999999999999999864
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-47 Score=366.23 Aligned_cols=312 Identities=23% Similarity=0.268 Sum_probs=255.8
Q ss_pred CCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHH
Q 036844 10 PAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDAR 89 (390)
Q Consensus 10 ~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 89 (390)
+.++|.++|+|+|+++++++++.+..+ .. ..++.+++||++|+++.+++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~------------------- 50 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDE------------------- 50 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCC-------------------
Confidence 357899999999999999999988642 11 24677889999999987766
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 036844 90 QAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRL 168 (390)
Q Consensus 90 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~ 168 (390)
+..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+..|+..||+...+ +++++++|++++.||..
T Consensus 51 ------~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~ 122 (319)
T PRK09352 51 ------TTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALST 122 (319)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHH
Confidence 3899999999999999999999999999999888 66899999999999997654 78889999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee----ecC
Q 036844 169 AKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT----TIP 244 (390)
Q Consensus 169 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~p 244 (390)
|..+|++|..++|||+++|.++..+ ++.+ ....++|||||+|+||++++. .+. ..+++...+.. ..|
T Consensus 123 A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~-~~~--~~~~~~~~~~~~~~~~~~ 193 (319)
T PRK09352 123 ADQFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEE-PGI--LSTHLGSDGSYGDLLYLP 193 (319)
T ss_pred HHHHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCC-CCe--EEEEEEEcCCCCCeEEeC
Confidence 9999999999999999999988533 3322 224579999999999999875 221 12233322211 123
Q ss_pred CCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 245 DTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
.......+. .++....++++++...+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++++..
T Consensus 194 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~- 268 (319)
T PRK09352 194 GGGSRGPAS---PGYLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV- 268 (319)
T ss_pred CCCCCCCCC---CCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh-
Confidence 222111000 1122223677888888889999999999999997 999 9999999999999999999999999864
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
++.+|||+++||++++|++++++ |++++| |+++++++|+|++|+++++||+
T Consensus 269 --~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 269 --TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred --hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence 59999999999999999999998 889999 9999999999999999999985
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=371.57 Aligned_cols=359 Identities=19% Similarity=0.252 Sum_probs=268.0
Q ss_pred CCCC-CeEEEEeeecCCCC--ccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC
Q 036844 7 NQRP-AATILAVGTATPPN--CFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA 83 (390)
Q Consensus 7 ~~~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~ 83 (390)
..|| ++|++..++|.|+. +++.+.+.+....... -.++..+...++.+++|+.+..+..+.- ...++
T Consensus 96 ~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~~~~sglg~~t~~p~~~-~~~~~------- 165 (511)
T PLN02192 96 LTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGS--FTEENLEFQRKILERSGLGESTYLPEAV-LNVPP------- 165 (511)
T ss_pred HcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCC--CCHHHHHHHHHHHHhcCCCCcccCChhh-ccCCC-------
Confidence 4678 79999999999987 6889999888753311 1233456788999999999987764432 11111
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeec-cccchH
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN-QGCYMG 162 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~C~~~ 162 (390)
+.-++...+....+...|+++||+++|++|+|||+||++++..+..|+++.+|+++||++.+.. +++++ +||+|+
T Consensus 166 ---~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~-afdLsgmGCSgg 241 (511)
T PLN02192 166 ---NPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL-SYNLGGMGCSAG 241 (511)
T ss_pred ---CccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce-EEEcccchhhhH
Confidence 1124556677899999999999999999999999999875433889999999999999986554 89998 799999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeee
Q 036844 163 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTT 242 (390)
Q Consensus 163 ~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~ 242 (390)
+.||++|+.++++++.++||||++|.+|.++...+ +++....+++|||||+|+||++.+. .. ..+.+++.+....+
T Consensus 242 l~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~--drs~lv~n~LFgDGAaAvLLs~~~~-~~-~~~k~~L~~~vrt~ 317 (511)
T PLN02192 242 LISIDLAKHLLQVHPNSYALVISMENITLNWYFGN--DRSMLVSNCLFRMGGAAILLSNKRS-DR-RRSKYQLVHTVRTH 317 (511)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCC--CHHHHhccccccccceEEEEecccc-cc-ccccceeeeeEEEE
Confidence 99999999999999999999999999996542212 2444455689999999999998543 11 11235565544444
Q ss_pred cCCCCCceeeEe----ecceeEEEeCCcchHHHHHhHHHHHHHh--------------hccCC-------CC--C---CC
Q 036844 243 IPDTENYITGQL----KEMGIYGHLSLDVPVAIGKYIGKCLSNA--------------MSPIG-------IS--D---WN 292 (390)
Q Consensus 243 ~p~~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------l~--~---~~ 292 (390)
.+..++.+.+.. .+.++.+.++++++..+...++..++.+ +.-.| +. + ..
T Consensus 318 ~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~ 397 (511)
T PLN02192 318 KGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKL 397 (511)
T ss_pred ecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHH
Confidence 554444333221 1123456667777766655444333221 00001 11 0 03
Q ss_pred ce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcc
Q 036844 293 SL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371 (390)
Q Consensus 293 di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~ 371 (390)
+| +|++||+|+++++.+++.||++++....++.++++||||+|+|+++.|+++.++ |++++| |+|++++||+
T Consensus 398 ~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGs 470 (511)
T PLN02192 398 AFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGS 470 (511)
T ss_pred hhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcc
Confidence 57 999999999999999999999986666666689999999999999999999987 999999 9999999999
Q ss_pred cccceeeeeEeecC-----CCCCC
Q 036844 372 GLTVETVVLQSFPI-----DSTNW 390 (390)
Q Consensus 372 G~~~ga~ll~~~~~-----~~~~~ 390 (390)
|++|++++|||..+ +.+||
T Consensus 471 Gf~~~sav~~~~~~~~~~~~~~~w 494 (511)
T PLN02192 471 GFKCNSAVWKALRTVNPAKEKNPW 494 (511)
T ss_pred hHhhhhhheeeecccCCcccCCCc
Confidence 99999999999866 22888
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-47 Score=368.13 Aligned_cols=302 Identities=16% Similarity=0.142 Sum_probs=239.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|.|+|+++++|+++.+.++ .+ .+++.+++||++|+++.++++
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~~------------------- 49 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDED------------------- 49 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCCC-------------------
Confidence 36899999999999999999987642 11 367889999999999977663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+++|+++||+++|++++|||+||++++++ +..|+.+..+++.||++.... +++++++|+|++.||++|
T Consensus 50 ------~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~-~~dv~~aC~g~~~al~~A 122 (345)
T TIGR00748 50 ------TATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLT-AADLEFACKAGTAGIQAC 122 (345)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCce-EEEHHHhHHHHHHHHHHH
Confidence 899999999999999999999999999999888 788999999999999975433 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..++++|..++||||++|..+. +|.+ . ..++|||||+|+||++++. . ..+....... .+..+
T Consensus 123 ~~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~-~------~~~~~~~~~~-~d~~~- 184 (345)
T TIGR00748 123 MGLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNT-V------AYFEGTYSYT-TDTPD- 184 (345)
T ss_pred HHHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCc-c------eEeeccccee-ccccc-
Confidence 9999999999999999999874 2332 1 2367899999999997654 1 1221111000 00000
Q ss_pred eeeEe-----ecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 250 ITGQL-----KEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 250 ~~~~~-----~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
.|.. ...+..+.....++ +.+.++++++|+++|+++ +|| +|++||+|.++++.+.+.||+|++|+..+
T Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~ 258 (345)
T TIGR00748 185 -FWRREGEPYPRHGGRFTGEPAYF----HHVVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPG 258 (345)
T ss_pred -ccccCCCcCCCcCCeecChHHHH----HHHHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeecc
Confidence 0100 00010111112233 344578899999999997 999 99999999999999999999999999875
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
. ..++||||++||+|++|+++++. +++| |+|++++||+|++|++++++|.+
T Consensus 259 ~-~~~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 259 L-LTPRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQD 309 (345)
T ss_pred c-cccccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEch
Confidence 1 13899999999999999999864 7899 99999999999999999999964
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-46 Score=368.29 Aligned_cols=343 Identities=18% Similarity=0.251 Sum_probs=255.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcC---CCchhHH---------HHHHHHHhhcCCccccccccchhhhhhCCCc
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATN---SEHKTEL---------KEKFKRICERQPINKRYFHLTEEILKENPNM 78 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~ 78 (390)
+++|.|+|+|+|+++++|+|+.+.++.... .+...++ .....+|++++||++||++.+.+.+..
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~---- 77 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDP---- 77 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcc----
Confidence 478999999999999999999887532110 0000000 012578889999999999864221111
Q ss_pred cCCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeecc
Q 036844 79 CCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQ 157 (390)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~ 157 (390)
....+.+++|...+.....+|+.+|+++||+++|+++++||.||++++++ +..|+.+..|++.||++. + ++++++
T Consensus 78 -~~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~ 153 (372)
T PRK07515 78 -DRMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNV 153 (372)
T ss_pred -cccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecc
Confidence 11234555565555556789999999999999999999999999999887 789999999999999973 3 789999
Q ss_pred ccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEe
Q 036844 158 GCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLS 237 (390)
Q Consensus 158 ~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~ 237 (390)
+|+|++.||.+|..+|++|..++|||+++|.++. +.++.+ +...++|||||+|+||++++. .. ....+++.+
T Consensus 154 aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~d-----~~~~~lfGDgAaA~vL~~~~~-~~-~~~~~~il~ 225 (372)
T PRK07515 154 ACSSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFRD-----RDSHFIFGDVATAVIVERADT-AT-SAGGFEILG 225 (372)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-cccccC-----CCCCEEecCccEEEEEeeccc-cc-cCCCceEEE
Confidence 9999999999999999999999999999999885 334432 224689999999999998654 21 001123322
Q ss_pred eee-----eecCCCCCc-eee---EeecceeEEE-eCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHH
Q 036844 238 CTQ-----TTIPDTENY-ITG---QLKEMGIYGH-LSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLI 306 (390)
Q Consensus 238 ~~~-----~~~p~~~~~-~~~---~~~~~g~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~ 306 (390)
... ..++...+. ..+ ........+. .+..+++.+.+.++++++++|+++|+++ +|| +|++||+|.+++
T Consensus 226 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~ 304 (372)
T PRK07515 226 TRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMN 304 (372)
T ss_pred EEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHH
Confidence 211 101000000 000 0001111233 3678888899999999999999999997 999 999999999999
Q ss_pred HHHHHH-cCC--CcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 307 DQVEKN-LGL--GKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 307 ~~~~~~-lgi--~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.+.+. ||+ ++++... ++++||||+|||+|++|+++. +++++| |++++++||+|++|++++||.
T Consensus 305 d~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 305 QLIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 999988 564 4566554 599999999999999999974 347899 999999999999999999985
|
|
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=359.12 Aligned_cols=351 Identities=21% Similarity=0.305 Sum_probs=273.5
Q ss_pred CCCC-CeEEEEeeecCCCC--ccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC
Q 036844 7 NQRP-AATILAVGTATPPN--CFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA 83 (390)
Q Consensus 7 ~~~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~ 83 (390)
-.|| ++|++..++|.|+. +++.+.+.+....... -.++..+...++.+++||.+-.+. |...+...+ .
T Consensus 54 ~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~--~~~~s~~F~~~i~~rSGlg~et~~-p~~~~~~~~------~ 124 (466)
T PLN00415 54 TTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQL--YTEETIQFMTRILNRSGLGDDTYS-PRCMLTSPP------T 124 (466)
T ss_pred HcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCC--CCHHHHHHHHHHHHHcCCCCCeee-CCccccCCC------C
Confidence 3567 79999999999876 6888888887743211 112345667889999999886554 332211111 1
Q ss_pred CChHHHHHHHHhhHHHHHHH-HHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeecc-ccc
Q 036844 84 PSLDARQAMLIDEVPKLGKE-AALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQ-GCY 160 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~-Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~-~C~ 160 (390)
|++. -.+...+|+.. |++++|+++|++|+|||+||+ ++++ +..|+++.+|+++||++++.. .++++. ||+
T Consensus 125 ~~~~-----~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v~-~~dL~gmGCs 197 (466)
T PLN00415 125 PSMY-----EARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDVK-TYNLSGMGCS 197 (466)
T ss_pred CChh-----hhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCce-EEEeccccch
Confidence 2221 11346677766 778999999999999999985 5778 689999999999999996664 788885 999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee
Q 036844 161 MGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ 240 (390)
Q Consensus 161 ~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 240 (390)
|++.||++|+.++++++.++||||++|.+|..+.++++ ++..+..++|||||+|+||++++. .. ..+.+++.....
T Consensus 198 ggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~-~~-~~~~~~L~~~vr 273 (466)
T PLN00415 198 AGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQ-DR-VRSKYELTHIVR 273 (466)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcc-cc-cCccceeeeEEE
Confidence 99999999999999999999999999999976544433 455556799999999999998654 11 123566654444
Q ss_pred eecCCCCCcee---eEeeccee-EEEeCCcchHHHHHhHHHHHHHhhccCC----------------------CCC---C
Q 036844 241 TTIPDTENYIT---GQLKEMGI-YGHLSLDVPVAIGKYIGKCLSNAMSPIG----------------------ISD---W 291 (390)
Q Consensus 241 ~~~p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------l~~---~ 291 (390)
.+.|.+++.+. |..+++|+ .+.++++++..+.+.++..++.+ .... +++ .
T Consensus 274 t~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 274 THKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred ecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 44477776665 67777887 78889999998888877666553 2221 221 0
Q ss_pred Cc--e-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEE
Q 036844 292 NS--L-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFG 368 (390)
Q Consensus 292 ~d--i-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~ 368 (390)
-+ + +|++|++++++++.+++.||++++++..+|+++++||||+|+|+++.|+++.++ ++.++| |++++++
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~ia 425 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLA 425 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEE
Confidence 12 6 899999999999999999999999999999999999999999999999999877 888999 9999999
Q ss_pred EcccccceeeeeEeecC
Q 036844 369 CGPGLTVETVVLQSFPI 385 (390)
Q Consensus 369 ~G~G~~~ga~ll~~~~~ 385 (390)
||+|+++.+++||+..+
T Consensus 426 FGpGf~~es~v~~~~~~ 442 (466)
T PLN00415 426 FGSGFKCNSIVWRALRT 442 (466)
T ss_pred EcCcchhhHhHHHHhcc
Confidence 99999999999999866
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=341.88 Aligned_cols=308 Identities=27% Similarity=0.351 Sum_probs=249.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
.++|.++|+|+|+++++|+++.+.++ . .+++..+||++|+++.+++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~-------------------- 46 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDE-------------------- 46 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCC--------------------
Confidence 37899999999999999999988652 1 2577889999999997654
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+..+|+.+|++++|+++|+++++||+||++++++ ...|+.+.++++.||++..+ +++++++|+|++.||.+|
T Consensus 47 -----~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A 119 (324)
T cd00827 47 -----DVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLA 119 (324)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999888 66889999999999998544 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCC--
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTE-- 247 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~-- 247 (390)
..+|++|..++|||+++|.++.... .. ....++|||||+|+||++++. .. ...+........+...
T Consensus 120 ~~~i~~g~~~~vlvv~~e~~~~~~~-~~------~~~~~~~gdgaaA~ll~~~~~-~~----~~~i~~~~~~~~~~~~~~ 187 (324)
T cd00827 120 ANLVESGPWRYALVVASDIASYLLD-EG------SALEPTLGDGAAAMLVSRNPG-IL----AAGIVSTHSTSDPGYDFS 187 (324)
T ss_pred HHHHHcCCCCEEEEEEEHHhhhccc-CC------CCccccccCceEEEEEecCcc-cc----cCCceeeeeecccccccC
Confidence 9999999999999999999986331 11 125789999999999998765 10 1122222222222111
Q ss_pred --CceeeEee-----cceeEEEeC---CcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCH-HHHHHHHHHcCC
Q 036844 248 --NYITGQLK-----EMGIYGHLS---LDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGD-GLIDQVEKNLGL 315 (390)
Q Consensus 248 --~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~-~~~~~~~~~lgi 315 (390)
..+....+ .....+.+. .+++..+.+.++++++++|++.|++ +|+ +|++||+|. .+++.+++.|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~ 265 (324)
T cd00827 188 PYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGG 265 (324)
T ss_pred ccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccc
Confidence 01111000 011233343 4788888899999999999999988 778 999999999 999999999999
Q ss_pred CcccchhHHH-HHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeee
Q 036844 316 GKDKLWASRY-VLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 316 ~~e~~~~~~~-~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
+.+++..++. ++++|||+++||+|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 266 PPEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred hHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence 9888887543 79999999999999999999998 889999 9999999999999999864
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=330.85 Aligned_cols=305 Identities=20% Similarity=0.169 Sum_probs=239.2
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
++|.++|.|+|+++++++++.+..+ .+ .+++...+|+++|+++.++|.
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g---~~---------~~~~~~g~G~~~~~~~~~~ed-------------------- 48 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARG---VD---------PEKFHIGIGQKKMAVPPIDED-------------------- 48 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhC---CC---------HHHHHhhcCceEEeeCCCCCC--------------------
Confidence 5899999999999999999988642 11 256778999999999877763
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.+|+++|++++|+++ ++++||+|+++|+++ +..|+++.+|++.||+++.+. ++++.++|+|++.||++|.
T Consensus 49 -----~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~-~~dv~~aC~gg~~aL~~A~ 120 (379)
T TIGR01835 49 -----IVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCR-SFELKQACYGATAALQMAK 120 (379)
T ss_pred -----HHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHHH
Confidence 8999999999999998 899999999999999 788999999999999986543 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++.+++.++||||++|..... +.+ ....+|||||+|+||++++. .+.+... +... +.+.+
T Consensus 121 ~~i~s~~~~~aLVv~~D~a~~~---~~~------~~~~~~GdGA~A~Ll~~~~~-------i~~~~~~-~~~~--t~~~~ 181 (379)
T TIGR01835 121 GHVALSPDRKVLVIASDIAKYG---LES------PGEPTQGAGAVAMLVSADPK-------LLAINED-SVLY--TDDIM 181 (379)
T ss_pred HHHHcCCCCeEEEEEeehhhcc---cCC------CCCccccCccEEEEEecCCC-------eeEEecc-ceee--ecCCC
Confidence 9999999999999999996531 111 12467999999999998654 1222110 0000 11111
Q ss_pred eeEeecce--eEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHH----HHHHHHHcCCCc-ccch-
Q 036844 251 TGQLKEMG--IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGL----IDQVEKNLGLGK-DKLW- 321 (390)
Q Consensus 251 ~~~~~~~g--~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~----~~~~~~~lgi~~-e~~~- 321 (390)
++. ++.+ +....++.....+.+.+.++++++|+++|+++ +|+ +|++||++.++ ++.+.+.++++. +++.
T Consensus 182 df~-~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~ 259 (379)
T TIGR01835 182 DFW-RPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN 259 (379)
T ss_pred Ccc-CCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence 110 1111 11223566677788899999999999999996 999 99999998777 345666777773 3332
Q ss_pred ---hHHHHHhhcCCCccchHHHHHHHHHHhhhhhc-cccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 322 ---ASRYVLREYGNVGAASVFFILDEVRKKSFEER-KATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 322 ---~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g-~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
.++.+.+++|||++||++++|++++++ + ++++| |+|+|+++|+|+......++..+
T Consensus 260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEcc
Confidence 234468999999999999999999986 5 68999 99999999999998888887743
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=313.45 Aligned_cols=309 Identities=17% Similarity=0.164 Sum_probs=235.8
Q ss_pred CC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCcccccccc--chhhhhhCCCccCCCCCC
Q 036844 9 RP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHL--TEEILKENPNMCCYNAPS 85 (390)
Q Consensus 9 ~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~--~~~~~~~~~~~~~~~~~~ 85 (390)
+| +++|.++|.|+|+++++|+++++.++ .+ .+|+ .+||.+|+++. ++|
T Consensus 1 ~~~~vgI~gig~Y~P~~~v~n~eLa~~~g---~~---------~~~~--~~GI~~r~~ava~~~E--------------- 51 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTCVQQEALEAHDG---VS---------KGKY--TIGLGQDCMAFCTDVE--------------- 51 (459)
T ss_pred CCCccEEEEEEEeCCCeEEcHHHHHHHhC---CC---------HHHH--hhccceeEeccCCCCC---------------
Confidence 46 79999999999999999999988752 22 2555 58999999754 555
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHH---HHcCCCCccccceeeccccch
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLV---KLLGLKPSVNRLMIYNQGCYM 161 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~---~~lgl~~~~~~~~~i~~~C~~ 161 (390)
++.+||++|++++|+++|+++++||+||++|+++ +..|+++..|+ ++||.+... ++|++++|+|
T Consensus 52 ----------d~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~~--afDi~~AC~G 119 (459)
T PLN02577 52 ----------DVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDIE--GVDSTNACYG 119 (459)
T ss_pred ----------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCcE--EeehhhhhHH
Confidence 3899999999999999999999999999999999 88999998886 677877654 8999999999
Q ss_pred HHHHHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeee
Q 036844 162 GGTVIRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCT 239 (390)
Q Consensus 162 ~~~al~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~ 239 (390)
+++||++|..+++++. .++||||++|..+... +|. ...+||||+|+||+.++. . .+.....+
T Consensus 120 ~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~--~----~l~~~~~g 183 (459)
T PLN02577 120 GTAALLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAP--I----VFESKYRG 183 (459)
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCC--c----eeeccccc
Confidence 9999999999999986 5999999999987422 232 245699999999997543 1 11111000
Q ss_pred eeecCCCCCcee-eEeecc-eeEEEeCCcchHHHHHhHHHHHHHhhccC------CCCCCCce-eEEEcCCCHHHHHHHH
Q 036844 240 QTTIPDTENYIT-GQLKEM-GIYGHLSLDVPVAIGKYIGKCLSNAMSPI------GISDWNSL-FYVLHPGGDGLIDQVE 310 (390)
Q Consensus 240 ~~~~p~~~~~~~-~~~~~~-g~~~~~~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~i~h~~~~~~~~~~~ 310 (390)
.. +.+.++ |+.... .+.++.|+.++.++.+.+..++++++++. |++. +|+ ++++||+..+|.....
T Consensus 184 ~~----~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~ 258 (459)
T PLN02577 184 SH----MAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSF 258 (459)
T ss_pred cc----CcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHH
Confidence 10 111111 221111 12334588999999999999999998887 8886 999 9999999888877665
Q ss_pred HHcCCC----------------------------------------------cccchhHHHHHhhcCCCccchHHHHHHH
Q 036844 311 KNLGLG----------------------------------------------KDKLWASRYVLREYGNVGAASVFFILDE 344 (390)
Q Consensus 311 ~~lgi~----------------------------------------------~e~~~~~~~~~~~~Gn~~sas~~l~L~~ 344 (390)
++|.+. .+|+..+...-++.||++++|+++.|..
T Consensus 259 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~S 338 (459)
T PLN02577 259 ARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALAS 338 (459)
T ss_pred HHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHH
Confidence 555311 0233333335688999999999999999
Q ss_pred HHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 345 VRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 345 ~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+++.. ....+| ++|+++|+|+|.......+++.+.
T Consensus 339 lL~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 339 LVHNK---HSELAG---KRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred HHhhc---cccCCC---CEEEEEeecCCccceeEEEEEeCC
Confidence 99751 113488 999999999999999888887754
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=287.99 Aligned_cols=213 Identities=46% Similarity=0.746 Sum_probs=184.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
..+|.|||+.+|+++++|+++.+.+.+....+...+.+++..++++++||++||+..|.+++.+.+++..+..|++++|+
T Consensus 14 ~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ps~~~R~ 93 (226)
T PF00195_consen 14 PAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADPSLAERN 93 (226)
T ss_dssp SEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS-HHHHH
T ss_pred CeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCccHHHHH
Confidence 79999999999999999999999876655555445567788999999999999999999888888877777889999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++|.+...+|+.+|+++||+++|++++|||+||++|||++..|++..+|.++|||++++.|.....+||++++.+|..|.
T Consensus 94 ~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~ 173 (226)
T PF00195_consen 94 ALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAK 173 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988989999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCC
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
.+.++++..+||||+.|.+|.+|+.+++.++++.+...+|||||+|+||+.+|
T Consensus 174 ~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 174 DIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999999999999888766666788999999999999999999875
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=284.53 Aligned_cols=309 Identities=20% Similarity=0.207 Sum_probs=248.5
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
.++|.++|.|+|.++++++|+++..+ -+ .+.+.+.+|+.+|.++.++|+
T Consensus 2 ~iGI~~~g~y~p~~~i~~~ela~~~g----~d--------~~k~~~gl~~~e~sv~~~~ED------------------- 50 (377)
T COG3425 2 MIGIVGIGAYIPRYRIKLEELARAWG----VD--------PEKIKKGLGVEEKSVPPWDED------------------- 50 (377)
T ss_pred ccccceEEEeccceEeeHHHHHhhcC----CC--------hHHhhhccccccccCCCCchh-------------------
Confidence 47899999999999999999988631 11 356788899999999988874
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+..|+++||+++|+++++||.+|+.|+++|.++ +...+++..|++.||+++... ++++..+|-++..||+.|
T Consensus 51 ------~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~-~~d~~~AC~agT~aL~~a 123 (377)
T COG3425 51 ------AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSAR-AADVEFACYAGTAALQAA 123 (377)
T ss_pred ------HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCcee-hhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 999999999999999999875 999999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..++.+++.+++|||++|+.-.. |.+ ..-...|+||+|+||++.+. . ...+...++.+ .+..+
T Consensus 124 ~~~v~s~~~~~~LvI~sD~a~~~---~~~------~~E~t~GAGavA~lIg~n~~-~-----~a~~~~~~syt-~d~~D- 186 (377)
T COG3425 124 IGWVESGMISYGLVIGADTAQYA---PGD------ALEYTAGAGAVAFLIGKNPP-I-----VAEFEGTGSYT-TDTPD- 186 (377)
T ss_pred HHHHHcCCccceEEEeehhhccC---CCc------ccCccCCCceEEEEEccCCC-e-----EEEecCceEEe-cCCCc-
Confidence 99999999999999999997631 221 12467899999999999744 1 22232232221 11111
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
.|+....-+-..-++..-..+.+.+..++++++++.|+++ +|+ ++++|+++.++-...++.++++.+++..+-...+
T Consensus 187 -FwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~~~~ 264 (377)
T COG3425 187 -FWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLVYPQ 264 (377)
T ss_pred -ccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccchhhh
Confidence 1221111010111222244567888999999999999997 999 9999999999999999999999888887744456
Q ss_pred hcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 329 EYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 329 ~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+.||++++|+++.|..+++. .. .+| |+|+++++|+|......-++...
T Consensus 265 ~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 265 RIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred hcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEecc
Confidence 89999999999999999997 33 589 99999999999987777766654
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=280.87 Aligned_cols=308 Identities=19% Similarity=0.169 Sum_probs=212.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCcccccc--ccchhhhhhCCCccCCCCCChHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYF--HLTEEILKENPNMCCYNAPSLDA 88 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~--a~~~~~~~~~~~~~~~~~~~~~~ 88 (390)
+++|.++|.|+|+++++|+++++..+ .+ ..++ .+||.+|++ +.++|
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~g---~~---------~~k~--~~GI~~rr~av~~~~E------------------ 48 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYDG---VS---------AGKY--TIGLGQTKMGFCTDRE------------------ 48 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhcC---CC---------HHHh--eechhheecccCCCCC------------------
Confidence 58999999999999999999987641 11 2444 699999994 55555
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHc---CCCCccccceeeccccchHHH
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLL---GLKPSVNRLMIYNQGCYMGGT 164 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~l---gl~~~~~~~~~i~~~C~~~~~ 164 (390)
++.+|+++|++++|+++++++++||+||++|.++ +..|+++..|++.| |.+... ++++.++|+|++.
T Consensus 49 -------d~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~--~fDi~~AC~G~t~ 119 (454)
T TIGR01833 49 -------DINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVE--GIDTTNACYGGTA 119 (454)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCce--EEeccccchhHHH
Confidence 3999999999999999999999999999999999 89999999999855 455443 8999999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCcccc--ceeEEEeeee
Q 036844 165 VIRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHER--TLFQVLSCTQ 240 (390)
Q Consensus 165 al~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~--~~~~~~~~~~ 240 (390)
||.+|..+++++. .++||||++|..- +.+ . . ...++||||+||||++++. ..++. ......+..-
T Consensus 120 AL~~A~~~i~s~~~~~~~aLVV~sDia~--y~~-~----~---~~~t~GaGAvAmLv~~~~~-~~~~~~~~~~~~~~~~D 188 (454)
T TIGR01833 120 ALFNAINWIESSSWDGRYALVVAGDIAV--YAK-G----N---ARPTGGAGAVAMLIGPNAP-IVFERGLRGSHMQHAYD 188 (454)
T ss_pred HHHHHHHHHHcCCcCCCeEEEEEecccc--ccC-C----C---eeeccccceEEEEeccCcc-ceecCccceEEEeeccc
Confidence 9999999999985 5999999999943 211 1 1 2457899999999998765 21110 0011110000
Q ss_pred eecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHH-------HHHhhcc----CCCCCCCce-eEEEcCCCHHHHHH
Q 036844 241 TTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKC-------LSNAMSP----IGISDWNSL-FYVLHPGGDGLIDQ 308 (390)
Q Consensus 241 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~-------i~~~L~~----~gl~~~~di-~~i~h~~~~~~~~~ 308 (390)
..-|..... +-...|+..-....+.+..+ +..++++ .+.+. +|+ +++||++..+|...
T Consensus 189 F~rP~~~~~---------~p~vdg~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~k 258 (454)
T TIGR01833 189 FYKPDLASE---------YPVVDGKLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQK 258 (454)
T ss_pred ccCCCCCCc---------ccccCCccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHH
Confidence 001221110 00001222112222222222 2333333 35775 899 99999998777654
Q ss_pred H-HHHc----C-----------------------------------------CCcccchhHHHHHhhcCCCccchHHHHH
Q 036844 309 V-EKNL----G-----------------------------------------LGKDKLWASRYVLREYGNVGAASVFFIL 342 (390)
Q Consensus 309 ~-~~~l----g-----------------------------------------i~~e~~~~~~~~~~~~Gn~~sas~~l~L 342 (390)
. .+.| . ...+|+..+...-++.||++++|+++.|
T Consensus 259 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L 338 (454)
T TIGR01833 259 SLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCL 338 (454)
T ss_pred HHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHH
Confidence 3 3222 1 0113343342234689999999999999
Q ss_pred HHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 343 DEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 343 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
..+++... .....| ++|+++++|+|.......+++.+.
T Consensus 339 ~Sll~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 339 ASLLSSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHhhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeCC
Confidence 99997511 114468 999999999999999888888754
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=238.02 Aligned_cols=236 Identities=29% Similarity=0.321 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
..+|+.+|++++|+++|++++|||.|+++++++ +..|+.+.+|+..+|+++.+ .+++..+|++++.||++|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999998 66899999999999997443 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCc-cccceeEEEeeeeeecCCCCCceeeEe
Q 036844 176 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISN-HERTLFQVLSCTQTTIPDTENYITGQL 254 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~ 254 (390)
|..+++||+++|. ++|||||+|+||++++.... ...+..++.+......+...
T Consensus 85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------- 138 (254)
T cd00327 85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM------- 138 (254)
T ss_pred CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC-------
Confidence 9999999999987 45899999999998643000 01122344432221111100
Q ss_pred ecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccch--hHHHHHhhcC
Q 036844 255 KEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLW--ASRYVLREYG 331 (390)
Q Consensus 255 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~--~~~~~~~~~G 331 (390)
.+....+.+.++++++|+++|+++ +|+ +|++|+.+..+++.+++.++++.++.. ....+..+||
T Consensus 139 ------------~~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 205 (254)
T cd00327 139 ------------VPAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG 205 (254)
T ss_pred ------------CCCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence 011124556788999999999997 999 999999999999999999998887763 0112588999
Q ss_pred CCccchHHHHHHHHHHhhhhhcccc-------CCCCCceEEEEEEcccccceeeee
Q 036844 332 NVGAASVFFILDEVRKKSFEERKAT-------TGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 332 n~~sas~~l~L~~~~~~~~~~g~i~-------~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
|+++||.++.|.++++. .+.+ +| ++++++++|.|+++++++|
T Consensus 206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 99999999999999886 4344 66 8999999999999999875
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-28 Score=232.48 Aligned_cols=254 Identities=23% Similarity=0.222 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHcCCC----CCCcCEEEEEecCC-CC---------------------CCcHHHHHHHHcCCCCccc
Q 036844 97 VPKLGKEAALKAIKEWGQS----VSKITHLIFSAFYG-VD---------------------MPGADVRLVKLLGLKPSVN 150 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~----~~~Id~li~~s~~~-~~---------------------~p~~a~~v~~~lgl~~~~~ 150 (390)
..+|+++|+++||+++|++ +++||.||++++++ +. .|+.+.+++..||++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~-g~- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH-GP- 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC-CC-
Confidence 6789999999999999999 99999999988876 43 678899999999994 33
Q ss_pred cceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCC----------CCc--cchhhhhhhhhhccCcEEEE
Q 036844 151 RLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHE----------PSE--THLDVLVVQAVFGDGAGAAI 218 (390)
Q Consensus 151 ~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~----------~~~--~~~~~~~~~~lfGDgAaA~v 218 (390)
++++..+|++++.||+.|..+|++|..+++||+++|..+..+.. |+. ...++...+++|||||+|+|
T Consensus 89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 68889999999999999999999999999999999987632211 000 00011235789999999999
Q ss_pred eccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eE
Q 036844 219 IGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FY 296 (390)
Q Consensus 219 l~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 296 (390)
|++.+.. ........++.+.+....+... ..+....+.+.++++++|+++|+++ +|| ++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~------------------~~~~~~~~~~~~~i~~al~~agl~~-~did~~ 228 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGM------------------GAFAPSAEGLARAAKEALAVAGLTV-WDIDYL 228 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCC------------------CCCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence 9976530 0001112344433222111110 0011123556788999999999997 999 99
Q ss_pred EEcCCCHHHHHHHHHHcCCCcccc---hhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc-----------------
Q 036844 297 VLHPGGDGLIDQVEKNLGLGKDKL---WASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT----------------- 356 (390)
Q Consensus 297 i~h~~~~~~~~~~~~~lgi~~e~~---~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~----------------- 356 (390)
++|+.+..+.+.+++.++.+.++. .. +.+..+|||+++|+.++.|..+++. .+.+
T Consensus 229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~----~~~~~~p~~~~~~~~~~~~~~ 303 (332)
T cd00825 229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLM----LEHGFIPPSIHIEELDEAGLN 303 (332)
T ss_pred EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHH----HhcCccCCCCCCCCCCcccCc
Confidence 999999999998888877765541 11 1258899999999999999999875 3333
Q ss_pred --------CCCCCceEEEEEEcccccceeeee
Q 036844 357 --------TGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 357 --------~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
+| ++++++++|.|.++++++|
T Consensus 304 ~~~~~~~~~~---~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 304 IVTETTPREL---RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred ccCCCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence 55 9999999999999999985
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=206.80 Aligned_cols=256 Identities=19% Similarity=0.265 Sum_probs=199.1
Q ss_pred CC-CeEEEEeeecCCCC--ccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCC
Q 036844 9 RP-AATILAVGTATPPN--CFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPS 85 (390)
Q Consensus 9 ~~-~~~I~~ig~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~ 85 (390)
|| ++|++..+.|.|+. +++.+.+.+.+..... ..++..+...+|.+++||.++.+. |.......
T Consensus 5 R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~--f~~~sl~F~~kIlerSGlG~eTy~-P~~~~~~p---------- 71 (290)
T PF08392_consen 5 RPRPVYLVDFACYKPPDELRVSREEFIEHARRCGR--FDEESLDFQRKILERSGLGDETYL-PPALHEIP---------- 71 (290)
T ss_pred CCCCEEEEeeeecCCCcccccCHHHHHHHHHhccc--CChhHHHHHHHHHHhcCCCccccC-CcccccCC----------
Confidence 66 89999999999987 6899999988743211 123345678889999999999887 43321111
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGT 164 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~ 164 (390)
.+.......+.+..++..|++++|+++|++|+|||.||+.+++....|+++++|.+++|++.+.. .+++ ++||++++.
T Consensus 72 ~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~-~~nLsGMGCsAgli 150 (290)
T PF08392_consen 72 PDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK-SYNLSGMGCSAGLI 150 (290)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee-eecccCCcchhhHH
Confidence 12445556677888999999999999999999999999999888999999999999999999876 5555 789999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecC
Q 036844 165 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIP 244 (390)
Q Consensus 165 al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 244 (390)
+|++|+.+++..+..++|||+.|.++..+.. ..+++...++++|+|||+|+||++.+. .. ....+++.+...++..
T Consensus 151 ai~lA~~lL~~~p~~~ALVVstE~~s~~~Y~--G~~rsmlv~NcLFr~GgAAvLLSn~~~-~~-~~aky~L~~~vRt~~g 226 (290)
T PF08392_consen 151 AIDLAKDLLQAHPNSYALVVSTENISANWYR--GNDRSMLVSNCLFRMGGAAVLLSNKPS-DR-RRAKYELLHTVRTHTG 226 (290)
T ss_pred HHHHHHHHHHhCCCcEEEEEEEeeccccccc--CCcHHHhhccccccCCceeEEeecCcc-cc-ccchhhhhheeeeecC
Confidence 9999999999999999999999999976532 224677789999999999999999876 22 2346777776666666
Q ss_pred CCCCceee---Eeeccee-EEEeCCcchHHHHHhHHHHHHHh
Q 036844 245 DTENYITG---QLKEMGI-YGHLSLDVPVAIGKYIGKCLSNA 282 (390)
Q Consensus 245 ~~~~~~~~---~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~ 282 (390)
..++.+.. ..+++|. -+.+++++...+.+.++..|..+
T Consensus 227 ~~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~l 268 (290)
T PF08392_consen 227 ADDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITTL 268 (290)
T ss_pred CCCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHHh
Confidence 55555443 2234554 47778999988887776655554
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=189.28 Aligned_cols=150 Identities=41% Similarity=0.697 Sum_probs=128.1
Q ss_pred EEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHH
Q 036844 234 QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKN 312 (390)
Q Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~ 312 (390)
++++..+..+|++++.|.|++.+.|+.+.++++++..+.+.+..+++++|+++|++. .++ +|++|+++++|++.+++.
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~-~~~~~wavHPGG~~ILd~v~~~ 79 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSD-WDILFWAVHPGGRKILDAVEEA 79 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCS-GGGSEEEEE-SSHHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccc-cccceeeecCChHHHHHHHHHH
Confidence 466777888999999999999999999999999999999999999999999999986 566 999999999999999999
Q ss_pred cCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 313 LGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 313 lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
|+++++++..+|+++++||||+|+++++.|++++++..++|....|+|.+++++++||+|++..+++||..|
T Consensus 80 L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~~ 151 (151)
T PF02797_consen 80 LGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSVP 151 (151)
T ss_dssp HTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-B
T ss_pred cCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeCC
Confidence 999999999999999999999999999999999885333355555555589999999999999999999754
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A .... |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=6e-21 Score=185.39 Aligned_cols=321 Identities=14% Similarity=0.063 Sum_probs=206.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHH-HhcCCCchhHHHH-HHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYF-RATNSEHKTELKE-KFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDA 88 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~-~~~~~~~~~~~~~-~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~ 88 (390)
+++|.++|...|=-. +.++....+. .+.+.+....+.. ..+||..++++.+|++.. .+
T Consensus 4 ~v~I~~~g~vs~lG~-~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~------------------ 63 (348)
T PRK06147 4 ALAIVGSGMVTAVGL-DAPSSCAAIRARLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG-PE------------------ 63 (348)
T ss_pred ceEEEecceeecCcC-CHHHHHHHHHcccccccccccccCCCCCceEeecCcCCcccCc-hH------------------
Confidence 478888888887654 2222222221 1111100000000 025677788888888753 33
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcC-CCCCCcCEEEEEec-----CC-CCCCcHHHHHHHHcCCCCccccceeeccccch
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWG-QSVSKITHLIFSAF-----YG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYM 161 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag-~~~~~Id~li~~s~-----~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~ 161 (390)
...+|+.+|++++|++++ +++++||++|+.+. .+ ...+.++..++++||+..... .+++..+|++
T Consensus 64 -------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~-~~~i~~~cas 135 (348)
T PRK06147 64 -------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPG-SAVIARGRVS 135 (348)
T ss_pred -------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCC-cccccccchH
Confidence 278999999999999999 79999999998654 22 345567889999999954332 7899999999
Q ss_pred HHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----cCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEE
Q 036844 162 GGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----FHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVL 236 (390)
Q Consensus 162 ~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~ 236 (390)
++.||..|..+|++|..+.+||+++|.++.. |.........+...+++|||||+++||++.+. .. ....+++
T Consensus 136 g~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~-A~--~rga~i~ 212 (348)
T PRK06147 136 GAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAG-GE--APGLPLL 212 (348)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhh-hh--cCCCceE
Confidence 9999999999999999999999999987631 10000000011235899999999999998654 11 0122333
Q ss_pred eeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH-----HHH
Q 036844 237 SCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID-----QVE 310 (390)
Q Consensus 237 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~ 310 (390)
..+....+.... ...+ .+ ...+.+.++++++|+++|+++ +|| ++..|..+....+ .+.
T Consensus 213 a~g~~~~~~~~~------------~~~~--~p-~~g~gl~~ai~~AL~~agl~~-~dId~v~ah~~gt~~~d~~e~~A~~ 276 (348)
T PRK06147 213 GLGLGREPAPVG------------ESED--LP-LRGDGLTQAIRAALAEAGCGL-EDMDYRIADLNGEQYRFKEAALAEM 276 (348)
T ss_pred EEEEeecCCCcc------------cCCC--CC-CChHHHHHHHHHHHHHcCCCH-HHCCEEEcCCCCCccchHHHHHHHH
Confidence 221111111100 0000 00 013456789999999999997 999 9999987655432 234
Q ss_pred HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 311 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+.++-..+.... +..-..+||+++|+-++.+...+.. ..+| .-+| +++|+++..-...-++++|+...
T Consensus 277 ~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~~~g-~~~g---~~~L~~s~~d~g~r~a~~l~~~~ 344 (348)
T PRK06147 277 RLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-SRKG-YGPG---PNVLCHLSDDDGARAALVLEYRR 344 (348)
T ss_pred HHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-HHcC-cCCC---CcEEEEecCCCCceEEEEEeccc
Confidence 445532222222 1247789999999999888865543 1114 4567 79999999988888999998653
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-22 Score=154.01 Aligned_cols=89 Identities=27% Similarity=0.529 Sum_probs=78.1
Q ss_pred hccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCC
Q 036844 283 MSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361 (390)
Q Consensus 283 L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~ 361 (390)
|+++|+++ +|| +|++||.|.++++.+++.+|++++++..+ +++|||+++||+|++|++++++ |++++|
T Consensus 1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~~---~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G--- 69 (90)
T PF08541_consen 1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPDN---LAEYGNTGSASIPINLADALEE----GRIKPG--- 69 (90)
T ss_dssp HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE-T---HHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHHH---HhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence 67899997 999 99999999999999999999999999875 8999999999999999999998 899999
Q ss_pred ceEEEEEEcccccceeeeeEe
Q 036844 362 DCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 362 d~vll~~~G~G~~~ga~ll~~ 382 (390)
|+|+++++|+|++|+++++||
T Consensus 70 d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEEETTTEEEEEEEE-
T ss_pred CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999997
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-21 Score=165.32 Aligned_cols=167 Identities=24% Similarity=0.291 Sum_probs=128.5
Q ss_pred CC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChH
Q 036844 9 RP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLD 87 (390)
Q Consensus 9 ~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~ 87 (390)
|| +|+|.+++.|+|.++++.+++++.- ... ..++...+|.++..++.+.|+
T Consensus 1 ~p~~VGI~~i~~y~p~~~v~~~~La~~~---g~d---------~~K~~~glgq~~~av~~~~ED---------------- 52 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYYVDQEELAEAR---GVD---------PGKYTIGLGQEKMAVPPPDED---------------- 52 (174)
T ss_dssp --SSEEEEEEEEE-ESEEEEHHHHHHHT---TS----------TCHHHTTT--SEEEE--TTS-----------------
T ss_pred CCccccEeEEEEecCceEecHHHHHHHh---CCC---------HHHhhhhcCeeEEEeCCCccc----------------
Confidence 79 8999999999999999999998752 111 134556788888888877773
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCC--CccccceeeccccchHHH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLK--PSVNRLMIYNQGCYMGGT 164 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~--~~~~~~~~i~~~C~~~~~ 164 (390)
+..||+.|++.+|++.++++++|+.|+++|.+. +...+.+.+|++.||++ ..+ +.+++.++|.|+..
T Consensus 53 ---------~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~-~~~e~k~ACygGTa 122 (174)
T PF01154_consen 53 ---------IVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDC-RGVEMKQACYGGTA 122 (174)
T ss_dssp ---------HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSS-EEEEEESGGGHHHH
T ss_pred ---------HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCce-eeeehhhhhHHHHH
Confidence 999999999999999999999999999999998 88899999999999994 333 47899999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCC
Q 036844 165 VIRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 165 al~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
||+.|..++.++. .+++|||++|..... +.. ....-|-||+||||+++.
T Consensus 123 AL~~a~~~v~s~~~~g~~aLVVasDiA~y~---~g~-------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 123 ALQNAVNWVASSPWDGRKALVVASDIARYD---LGS-------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HHHHHHHHHCSTTSTTEEEEEEEEEEE--S---TTT-------TGGG-EEEEEEEEEECS-
T ss_pred HHHHHHHHHhcCCCCCCeEEEEeccccccC---CCC-------ccccccceeEEEEecCCC
Confidence 9999999999974 689999999997631 111 246789999999999753
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=169.44 Aligned_cols=245 Identities=14% Similarity=0.135 Sum_probs=160.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++..+|+.+|+++||+++|++++|||++|+++. +. .+..+.++++.||++ .++++++|++++.||.+|..+++
T Consensus 48 kAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP-----~fdV~~ACSTf~~AL~lAa~lI~ 120 (327)
T TIGR02845 48 KAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIP-----FLGLYGACSTSMETLALGAMLVD 120 (327)
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCC-----EEEEeccCHHHHHHHHHHHHHHh
Confidence 357899999999999999999999999998873 31 234678999999973 68999999999999999999999
Q ss_pred cCCCCeEEEEEeeccc---cccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCcee
Q 036844 175 NNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s---~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 251 (390)
+|..++|||+++|..+ +.|+.|.+...+++.+..+|||||+|+||++.+..+ ...-...+.. ++
T Consensus 121 SG~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~~-----~i~~~t~gkv--------~d 187 (327)
T TIGR02845 121 GGFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGGP-----RITSATIGKV--------VD 187 (327)
T ss_pred CCCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCCC-----ceEEEEEEEE--------Ee
Confidence 9999999999999987 234445222112345789999999999999876422 2222222211 11
Q ss_pred eEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcC---CCHHHHHHHHHHcCCCcccchhHHH--
Q 036844 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHP---GGDGLIDQVEKNLGLGKDKLWASRY-- 325 (390)
Q Consensus 252 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~---~~~~~~~~~~~~lgi~~e~~~~~~~-- 325 (390)
+.+++. +.|| ..........|.+.|+..|.++ +|. .++.-. .++.++..+.++-|++.++.+...-
T Consensus 188 ~g~~d~---~nmg----aamapaa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~ 259 (327)
T TIGR02845 188 YGITDP---LDMG----AAMAPAAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVM 259 (327)
T ss_pred cCCCCc---ccch----hhhhHHHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeE
Confidence 111100 1111 1223344567788899999997 887 555543 4668888888887776543222100
Q ss_pred HH---h--hcCCCcc-chHHHHHHHHHHhhhhhccccCCCCCceEEEEEEccccc
Q 036844 326 VL---R--EYGNVGA-ASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLT 374 (390)
Q Consensus 326 ~~---~--~~Gn~~s-as~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~ 374 (390)
++ + .-|-.|+ +|-.+...+++++ .++|++ .+||+++.|+=+|
T Consensus 260 iy~~~~~~~aggsgc~csa~v~~~~~~~~-~~~g~~------~r~l~v~tgalls 307 (327)
T TIGR02845 260 IYRPDQQVFAGGSGCACSAVVTYGHILKE-MLRGKL------KKVLVVATGALLS 307 (327)
T ss_pred EEcCCCcccCCCcccchhHHHHHHHHHHH-HhcCcc------eEEEEEEchhhcC
Confidence 00 0 1133332 2333333445543 222433 5799999997443
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=163.26 Aligned_cols=243 Identities=15% Similarity=0.148 Sum_probs=164.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+..+|+.+|+++||+++|++++|||++|+++...+. ..+..+++.||+ + +++++++|+++..||.+|..++++
T Consensus 55 AeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~--~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~S 127 (337)
T PRK08304 55 AERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQI--ISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDG 127 (337)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCc--chHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999998753333 567899999997 2 799999999999999999999999
Q ss_pred CCCCeEEEEEeecccc---ccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceee
Q 036844 176 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITG 252 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 252 (390)
|..++|||++++..+. +|+.|.+..-+.+.+..+++|||+|+||++.+..+ ...-...+.. +++
T Consensus 128 G~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~~-----~i~~~t~Gkv--------~D~ 194 (337)
T PRK08304 128 GFADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSGP-----RITHATIGKV--------VDL 194 (337)
T ss_pred CCCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCCc-----eEEEEeEEEE--------Eec
Confidence 9999999999999873 57777654444456789999999999999876412 2222222211 111
Q ss_pred EeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcC---CCHHHHHHHHHHcCCCcccchhHH--HH
Q 036844 253 QLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHP---GGDGLIDQVEKNLGLGKDKLWASR--YV 326 (390)
Q Consensus 253 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~---~~~~~~~~~~~~lgi~~e~~~~~~--~~ 326 (390)
.+++. +.|| ..........|.+.|+..|.++ +|. .++.-. .+..++..+.++-|++.++.+..+ .+
T Consensus 195 g~~d~---~nmg----aaMapAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~i 266 (337)
T PRK08304 195 GIKDP---NDMG----AAMAPAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMI 266 (337)
T ss_pred CCCCc---ccch----hhhhHHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEE
Confidence 11100 1111 1223344567788899999997 887 555543 467888888888787765332210 00
Q ss_pred Hh---h---cCCCcc-chHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccc
Q 036844 327 LR---E---YGNVGA-ASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGL 373 (390)
Q Consensus 327 ~~---~---~Gn~~s-as~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 373 (390)
++ . -|-.|+ +|-.+...+++++ ++.| ...+||+++.|+=+
T Consensus 267 y~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g-~~~rvl~v~tGaLl 313 (337)
T PRK08304 267 YDSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKG-KLKRVLVVATGALL 313 (337)
T ss_pred eccCCCcccCCCcccchhHHHHHHHHHHH------HhcC-CceEEEEEEchhhc
Confidence 11 0 133332 2333333445543 3333 12579999999743
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.8e-16 Score=144.20 Aligned_cols=246 Identities=15% Similarity=0.122 Sum_probs=163.5
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
|++...+|+.+|+++||+++|++++|||.++.++.+.+..|+ ..+++.||++ ++.+.++|+++..||.+|..+
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~ 122 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALI 122 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHH
Confidence 445688999999999999999999999999999888666666 4999999965 589999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccc---cccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 173 AENNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s---~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
+++|..++||++++.... ++|+.|.+...+.+.+..+---||+|+||++....+ ...-...+..
T Consensus 123 VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~~-----~i~~~T~Gkv-------- 189 (334)
T PRK12404 123 VNSGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDGP-----RVTSATIGRV-------- 189 (334)
T ss_pred HHcCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCCc-----eEEEEEEEEE--------
Confidence 999999999999998875 467777665444455667778899999999865412 2222222211
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcC---CCHHHHHHHHHHcCCCc-ccchhHH
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHP---GGDGLIDQVEKNLGLGK-DKLWASR 324 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~---~~~~~~~~~~~~lgi~~-e~~~~~~ 324 (390)
+++.+++ -+.||. .........|.+.|+..|.++ +|. .++.-. .++.++..+.++-|++. ++.+...
T Consensus 190 ~D~g~~d---~~nMGa----aMAPAA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DC 261 (334)
T PRK12404 190 VDMGLTD---PFNMGG----AMAPAAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDC 261 (334)
T ss_pred EecCCCC---cccchh----hhhHHHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCccccccc
Confidence 1111110 011221 223344567788899999997 887 555543 46688888888777765 3222110
Q ss_pred --HHH---h--hcCCCcc-chHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccc
Q 036844 325 --YVL---R--EYGNVGA-ASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGL 373 (390)
Q Consensus 325 --~~~---~--~~Gn~~s-as~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 373 (390)
.++ + .-|-.|+ +|-.+...+++++ .++|++ .+||+++.|+=+
T Consensus 262 G~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~-~~~g~~------~rvL~v~TGALl 311 (334)
T PRK12404 262 GLLIYREGQPVIAGASGPGCSATVTYGHLLNR-MKRGEL------KRILVVATGALL 311 (334)
T ss_pred CeEEecCCCcccCCCcccchHHHHHHHHHHHH-HhcCCc------eEEEEEEchhhc
Confidence 000 0 1133332 2333333445543 222433 579999999743
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=156.11 Aligned_cols=258 Identities=14% Similarity=0.137 Sum_probs=168.0
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C--------------------------CCCcHHHHHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYG-V--------------------------DMPGADVRLVKL 142 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~-~--------------------------~~p~~a~~v~~~ 142 (390)
.+...+|+.+|+++||+++|++++++|. |+++++.+ + ..+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 3567899999999999999999877664 55555432 1 224577899999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc---------------------cCCCCccch
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD---------------------FHEPSETHL 201 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~---------------------~~~~~~~~~ 201 (390)
||+.. + .+.+..+|++++.||..|..+|++|.++++||+++|..+.. ...|.+.
T Consensus 148 lgl~g-~--~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~-- 222 (406)
T cd00834 148 LGLRG-P--NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDK-- 222 (406)
T ss_pred hCCCC-c--ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCC--
Confidence 99964 3 67899999999999999999999999999999999987510 0112221
Q ss_pred hhhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
...++++||||+|+||++.+. .. .......+.+.+.... +.... .+. .....+.+++
T Consensus 223 --~~~g~~~geGA~a~vL~~~~~-A~~~g~~~~a~i~g~~~~~d--------------~~~~~-~~~---~~~~~~~~~i 281 (406)
T cd00834 223 --DRDGFVLGEGAGVLVLESLEH-AKARGAKIYAEILGYGASSD--------------AYHIT-APD---PDGEGAARAM 281 (406)
T ss_pred --CCCCEeeeccEEEEEEecHHH-HHHCCCeEEEEEEEEEeccc--------------CCCCC-CCC---CCcHHHHHHH
Confidence 124689999999999998653 11 0011223333222110 00000 000 0124456788
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ +|| ++.+|..+.... +.+.+.++-..+++..+ ..-..+||+.+|+-++.|..++.. .++|
T Consensus 282 ~~al~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~ 358 (406)
T cd00834 282 RAALADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDG 358 (406)
T ss_pred HHHHHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcC
Confidence 99999999997 999 999998766443 34555565433344332 245678999999988887765532 1113
Q ss_pred cccCCC---------------------CCceEEEEEEcccccceeeee
Q 036844 354 KATTGE---------------------GLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 354 ~i~~G~---------------------~~d~vll~~~G~G~~~ga~ll 380 (390)
.+.+=. ...+++..+||.|.+-.+++|
T Consensus 359 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 359 VLPPTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CcCCCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 222100 014677788888877777664
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.2e-16 Score=153.83 Aligned_cols=252 Identities=14% Similarity=0.115 Sum_probs=167.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKP-SVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~-~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|+++||+++|++++|||.||++++++ +..|..+..++..||++. .+ +++++++|++++.+|..|..+|
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I 98 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSI 98 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988776 567788888999999985 44 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccccc-----------CC--------CC---c---c----------------chhh---------
Q 036844 174 ENNPGARVLVVCSDIRVLDF-----------HE--------PS---E---T----------------HLDV--------- 203 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~~~-----------~~--------~~---~---~----------------~~~~--------- 203 (390)
++|..++|||+++|++|..- .. +. + . ++++
T Consensus 99 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~ 178 (386)
T cd00751 99 AAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178 (386)
T ss_pred HCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999875210 00 00 0 0 0000
Q ss_pred ------h-----------------------------------------------------hhhhhhccCcEEEEeccCCC
Q 036844 204 ------L-----------------------------------------------------VVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 204 ------~-----------------------------------------------------~~~~lfGDgAaA~vl~~~~~ 224 (390)
+ ...+.++|||+|+||.+.+.
T Consensus 179 ~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~ 258 (386)
T cd00751 179 QRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEK 258 (386)
T ss_pred HHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHH
Confidence 0 00012245666666554332
Q ss_pred CCcc-ccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCC
Q 036844 225 ISNH-ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGG 302 (390)
Q Consensus 225 ~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~ 302 (390)
.... ..+...+.+.+... ..... .......+++++|+++|+++ +|| ++-+|-..
T Consensus 259 a~~~~~~~~~~I~g~~~~~--------------------~~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f 314 (386)
T cd00751 259 AKELGLKPLARIVGYAVAG--------------------VDPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAF 314 (386)
T ss_pred HHHCCCCeeEEEEEEEEcc--------------------CCCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechh
Confidence 0000 00111222221110 00110 01123478899999999997 999 88899776
Q ss_pred HHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 303 DGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 303 ~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
....-...+.||+.+..+..+ --.-.+||...++-...+.+++.+-. |+ .+ .+.|....|+|..-++++|+
T Consensus 315 ~~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 315 AAQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HHHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 555556678899876444442 12346899999988888888777511 21 23 56777777777777777776
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=150.78 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..+|++.... +++++.+|++++.++..|..+|+
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p-~~~V~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVP-AMTLNKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcc-eEEecccchhHHHHHHHHHHHHH
Confidence 4899999999999999999999999999998876 456777888999999986332 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.|||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999998764
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=141.91 Aligned_cols=313 Identities=18% Similarity=0.165 Sum_probs=199.0
Q ss_pred CCCC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCC
Q 036844 7 NQRP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPS 85 (390)
Q Consensus 7 ~~~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~ 85 (390)
.-+| +++|.++-.|+|.+.|+|+|++..- ..+. .++--.+|..+--|+.+.|
T Consensus 6 ~~~p~dvGI~aieiyfP~~yV~Q~elEk~d---~vs~---------gKytIGLGq~~MgfcsdrE--------------- 58 (462)
T KOG1393|consen 6 SNWPKDVGIIAIEIYFPSQYVDQEELEKFD---GVSA---------GKYTIGLGQTQMGFCSDRE--------------- 58 (462)
T ss_pred ccCccccceeEEEEEcCccccChhhHhhcC---Cccc---------cceEeccCcceecccCchh---------------
Confidence 3467 9999999999999999999998752 1111 2222233444444554444
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcC--CCCccccceeeccccchH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLG--LKPSVNRLMIYNQGCYMG 162 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lg--l~~~~~~~~~i~~~C~~~ 162 (390)
+...|+..+.++++++-+++++.|+.|-++|.|- .-..+.-..+++.++ -+.+.. -.|..++|.|+
T Consensus 59 ----------Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGG 127 (462)
T KOG1393|consen 59 ----------DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGG 127 (462)
T ss_pred ----------hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-ccccccccccc
Confidence 3788999999999999999999999999999987 777778888888877 344444 67889999999
Q ss_pred HHHHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeee-
Q 036844 163 GTVIRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCT- 239 (390)
Q Consensus 163 ~~al~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~- 239 (390)
..||-.|-.++++.. .+.+|||++|..... ..+ ....-|-||+|++++++.. -.++ +.++.....
T Consensus 128 taALfnavnWiESssWDGr~aivV~gDIAvY~-~G~---------aRpTGGAgAVAmLIgPnAp-i~fe-rglr~thM~h 195 (462)
T KOG1393|consen 128 TAALFNAVNWIESSSWDGRYAIVVCGDIAVYA-KGN---------ARPTGGAGAVAMLIGPNAP-IIFE-RGLRATHMQH 195 (462)
T ss_pred HHHHHHHhhhhhhcccCCceeEEEEeeEEEec-CCC---------CCCCCCcceEEEEEcCCCc-eEec-ccchhhhhhh
Confidence 999999999999874 799999999997621 011 1244599999999999765 1110 011110000
Q ss_pred --eeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHH--------HHHhhccCCCCCCCce-eEEEcCCCHHHHHH
Q 036844 240 --QTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKC--------LSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ 308 (390)
Q Consensus 240 --~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~--------i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~ 308 (390)
.-..|+-... +-+..|+.........+..+ .++-.+.-+... ++. ++|+|.+--++.+.
T Consensus 196 ayDFyKPdl~SE---------yPvVDGklSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqK 265 (462)
T KOG1393|consen 196 AYDFYKPDLLSE---------YPVVDGKLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQK 265 (462)
T ss_pred hhhccCCCCCCc---------CceecCeehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHH
Confidence 0011211000 00111222222222222222 222222234443 677 89999877655443
Q ss_pred -HHHHc-----------------------------------------CCCcccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 309 -VEKNL-----------------------------------------GLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 309 -~~~~l-----------------------------------------gi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
+++.+ .+-.+|+..+-..-++.|||.++|++..|..++
T Consensus 266 s~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll 345 (462)
T KOG1393|consen 266 SLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLL 345 (462)
T ss_pred HHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHH
Confidence 22211 011112211100114789999999999999999
Q ss_pred HhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 347 KKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 347 ~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
..... .--.| ++|.++++|+|.+....-+|+..
T Consensus 346 ~~~~~--d~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 346 SAVPA--DELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred hccch--hhhhc---cEEEEEeecCcchhheEEEEecC
Confidence 86321 12356 89999999999998888888764
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.6e-15 Score=151.74 Aligned_cols=265 Identities=16% Similarity=0.169 Sum_probs=170.1
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CC-------------------CCcHHHHHHHHcCCCCc
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-VD-------------------MPGADVRLVKLLGLKPS 148 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~~-------------------~p~~a~~v~~~lgl~~~ 148 (390)
..+....|+.+|+++||+++|+++++|| .|++++.++ +. .+..+.+++..+|+..
T Consensus 83 ~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g- 161 (424)
T smart00825 83 AMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG- 161 (424)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC-
Confidence 3455678999999999999999999999 788887653 21 3456788999999975
Q ss_pred cccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCccc--hhhhhhhhhhccCcEE
Q 036844 149 VNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHEPSETH--LDVLVVQAVFGDGAGA 216 (390)
Q Consensus 149 ~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~~~--~~~~~~~~lfGDgAaA 216 (390)
+ .+.+..+|++++.||..|..+|++|..+.|||+++|..... +..++... .+....++++||||+|
T Consensus 162 ~--~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaa 239 (424)
T smart00825 162 P--SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGV 239 (424)
T ss_pred C--ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEE
Confidence 3 68899999999999999999999999999999999974310 11111000 0111247889999999
Q ss_pred EEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-
Q 036844 217 AIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL- 294 (390)
Q Consensus 217 ~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di- 294 (390)
+||++.... ........++.+.+........ +...+ ....+..+++++|+++|+++ +||
T Consensus 240 lVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~----------------~~~~~--~~~~~~~a~~~al~~Agl~~-~dId 300 (424)
T smart00825 240 VVLKRLSDALRDGDPILAVIRGSAVNQDGRSN----------------GLTAP--SGPAQARLIRQALARAGVDP-ADVD 300 (424)
T ss_pred EEEccHHHHHHCCCeEEEEEEEEEEeCCCCCC----------------CCCCc--CHHHHHHHHHHHHHHhCCCH-HHcc
Confidence 999975430 0000112234433222111000 00001 12345578899999999997 999
Q ss_pred eEEEcCCCHH-----HHHHHHHHcCCCc---ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc----------
Q 036844 295 FYVLHPGGDG-----LIDQVEKNLGLGK---DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT---------- 356 (390)
Q Consensus 295 ~~i~h~~~~~-----~~~~~~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~---------- 356 (390)
++.+|-.+.. -.+.+.+.++... .++..+ ..-..+||+.+|+-.+.|...+.. ..+|.+.
T Consensus 301 ~i~~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~~~~~~ 378 (424)
T smart00825 301 YVEAHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLA-LRHGTIPPTLHFETPNP 378 (424)
T ss_pred EEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHH-HhCCCCCCCCCCCCCCC
Confidence 9999965433 2345566665321 223222 134457999999888777655422 0002110
Q ss_pred ----------------C---CCCCceEEEEEEcccccceeeeeE
Q 036844 357 ----------------T---GEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 357 ----------------~---G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
+ +...+.++..+||-|....+++|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 379 HIDLEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred CCCcccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 0 001267888999998888888876
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-15 Score=146.95 Aligned_cols=95 Identities=13% Similarity=0.028 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCC-CcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDM-PGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~-p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|++++|+++|++++|||.||++++++ +.. +..+..+...+|++.... +++++++|++++.|+..|..+|
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~V~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETP-AFNVNRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCc-eEEecccchHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999887 433 345666667789974222 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.|||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999999874
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.1e-15 Score=147.45 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=84.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKP-SVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~-~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|+++||+++|++++|||.|++++.++ ...|..+..++..+|++. .+ +++++++|++++.+|..|..+|
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~--~~~v~~~Casg~~al~~A~~~I 97 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVP--AYTVNRQCASGLQAVILAAQLI 97 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCce--eeeecchhhHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988776 555777888999999985 44 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeeccc
Q 036844 174 ENNPGARVLVVCSDIRV 190 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s 190 (390)
++|..++|||+++|+++
T Consensus 98 ~sG~~~~vLv~g~e~~s 114 (386)
T TIGR01930 98 RAGEADVVVAGGVESMS 114 (386)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999865
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=9e-15 Score=144.55 Aligned_cols=251 Identities=17% Similarity=0.115 Sum_probs=167.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C--CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V--DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~--~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
+..+|+.+|++++|+++|+++++||.|+++++.+ . ..+..+..++..||++..+ ++.++.+|++++.+|..|..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988765 3 2467888999999998544 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccccc----------------CCCCccc------------------------------hh----
Q 036844 173 AENNPGARVLVVCSDIRVLDF----------------HEPSETH------------------------------LD---- 202 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~~~----------------~~~~~~~------------------------------~~---- 202 (390)
|++|..++|||+++|..+... ..|.... ++
T Consensus 99 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~ 178 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK 178 (389)
T ss_pred HHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999765210 0010000 00
Q ss_pred -------------------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecc
Q 036844 203 -------------------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEM 257 (390)
Q Consensus 203 -------------------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 257 (390)
.....+.++|||+|+||++.+.-.........+.+.+....+.. +
T Consensus 179 np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~~~v~I~g~g~~~~~~~---~------- 248 (389)
T PRK06064 179 NPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTDTPVWIKASGQASDTIA---L------- 248 (389)
T ss_pred CcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcCCCeEEEEEEEecCccc---c-------
Confidence 00012266999999999975430000011234544332211110 0
Q ss_pred eeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc----------------cc
Q 036844 258 GIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD----------------KL 320 (390)
Q Consensus 258 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e----------------~~ 320 (390)
...+++.. ......+++++|+++|+++ +|| ++-+|-......-...|.||+.+. ++
T Consensus 249 ----~~~~~~~~--~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~~ 321 (389)
T PRK06064 249 ----HDRKDFTT--LDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDI 321 (389)
T ss_pred ----cccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 00011110 1233467899999999997 999 999999887776677899998542 22
Q ss_pred hhHHHH---HhhcCCCccchHHHHHHHHHHhhhhhccc------cCCCCCceEEEEEEcc
Q 036844 321 WASRYV---LREYGNVGAASVFFILDEVRKKSFEERKA------TTGEGLDCGVLFGCGP 371 (390)
Q Consensus 321 ~~~~~~---~~~~Gn~~sas~~l~L~~~~~~~~~~g~i------~~G~~~d~vll~~~G~ 371 (390)
+.+ . .-.+||...++-+..+.++..+-. |+- -+| .++.+..++|.
T Consensus 322 pvN--~~GG~l~~Ghp~~a~G~~~~~e~~~qL~--g~a~~g~rqv~~--a~~~l~~~~g~ 375 (389)
T PRK06064 322 PVN--PSGGLKAKGHPVGATGVSQAVEIVWQLR--GEAEKGRQQVIG--AGYGLTHNVGG 375 (389)
T ss_pred eec--CCCCcccCCCCcchhHHHHHHHHHHHHh--CCCCCCCccCCC--ccEEEEecCCC
Confidence 221 1 123899998888888777776521 221 023 26777777774
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.1e-14 Score=144.08 Aligned_cols=254 Identities=16% Similarity=0.123 Sum_probs=167.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|+++||+++|++++|||.|+++++++ ...+..+..++..+|++.... +++++.+|++++.+|..|..+|+
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~-~~~v~~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP-ALTINKVCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc-eeeecccchHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988766 334455556777889874222 78999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccccC-----------------C------CCcc-------------------chh----------
Q 036844 175 NNPGARVLVVCSDIRVLDFH-----------------E------PSET-------------------HLD---------- 202 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~~~~-----------------~------~~~~-------------------~~~---------- 202 (390)
+|..++|||+++|.+|.... + +.+. +++
T Consensus 104 sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~ 183 (393)
T PRK05790 104 AGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQ 183 (393)
T ss_pred cCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999998642100 0 0000 000
Q ss_pred -----hhh------------------------------------------------------hhhhhccCcEEEEeccCC
Q 036844 203 -----VLV------------------------------------------------------VQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 203 -----~~~------------------------------------------------------~~~lfGDgAaA~vl~~~~ 223 (390)
++. ..+.++|||+|+||++.+
T Consensus 184 ~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e 263 (393)
T PRK05790 184 QKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEA 263 (393)
T ss_pred HHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHH
Confidence 000 012446777777776543
Q ss_pred CCCcc-ccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCC
Q 036844 224 DISNH-ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPG 301 (390)
Q Consensus 224 ~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~ 301 (390)
.-... ..+..++.+.+.... ...... .....+++++|+++|+++ +|| ++-+|-.
T Consensus 264 ~a~~~~~~~~~~I~g~~~~~~--------------------~~~~~~---~~~~~a~~~a~~~Agi~~-~did~~e~~d~ 319 (393)
T PRK05790 264 KAKELGLTPLARIVSYAVAGV--------------------DPAIMG---IGPVPAIRKALEKAGWSL-ADLDLIEINEA 319 (393)
T ss_pred HHHHCCCCeeEEEEEEEEccC--------------------CCCccc---hhHHHHHHHHHHHcCCCH-HHCCEEEeCcH
Confidence 20000 011113333222100 001010 123467899999999997 999 8888875
Q ss_pred CHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 302 ~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
-....-...+.||+...++..+ --.-.+||..+|+-...+.++.++ ++.. +..+.|....|.|..-++++|+
T Consensus 320 f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~q------L~~~-~~~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 320 FAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHE------MKRR-GAKKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred HHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHH------HHhc-CCCeEEEEEeccCCceeEEEEE
Confidence 4444445678899876666543 234558999999988888888875 3221 1156777777777777888887
Q ss_pred e
Q 036844 382 S 382 (390)
Q Consensus 382 ~ 382 (390)
.
T Consensus 392 ~ 392 (393)
T PRK05790 392 R 392 (393)
T ss_pred c
Confidence 5
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.1e-14 Score=143.52 Aligned_cols=94 Identities=16% Similarity=0.097 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCC-cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMP-GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p-~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+.+|+.+|++++|+++|+++++||.||++++++ ...| ..+..++..+|++.... +++++++|+|++.||..|..+|.
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p-~~~V~~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVP-GMTVNRFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCc-eeeecchhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999887 5544 48889999999985332 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|++|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.3e-14 Score=141.50 Aligned_cols=95 Identities=17% Similarity=0.097 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CCCCcHHHH-HHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEW-GQSVSKITHLIFSAFYG-VDMPGADVR-LVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~~~-~~~p~~a~~-v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
+..+|+.+|++++|+++ |++++|||.||++++++ ...+....+ +...+|++.... +++++++|++++.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p-~~~V~~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVG-GVTVNRFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCc-eeeecchhhHHHHHHHHHHHH
Confidence 48999999999999997 99999999999998887 444444445 455569985332 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|++|..+.|||+++|.+|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999999874
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.5e-14 Score=139.89 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
.+.+|+.+|++++|+++|+++++||.||+++.++ .. .+..+..+...+|++.... +++++++|+|++.||.+|..+|
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~p-a~~Vn~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVP-GVQINRFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCC-eEEEcchhhhHHHHHHHHHHHH
Confidence 3889999999999999999999999999999987 33 3456666778889965443 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|++++|++|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999874
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.3e-14 Score=138.47 Aligned_cols=233 Identities=16% Similarity=0.051 Sum_probs=160.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|+++++||.|+++++.+ ...+..+..++..||++..+ ++.++.+|++++.++..|..+|+
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988766 44677889999999997544 78999999999999999999999
Q ss_pred cCCCCeEEEEEeecccccc-----C----C-------CCc-cch-h----------------------------------
Q 036844 175 NNPGARVLVVCSDIRVLDF-----H----E-------PSE-THL-D---------------------------------- 202 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~~~-----~----~-------~~~-~~~-~---------------------------------- 202 (390)
+|..+.||++++|.++... . + +.. ... .
T Consensus 93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n 172 (375)
T cd00829 93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN 172 (375)
T ss_pred hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999876311 0 0 000 000 0
Q ss_pred ------------------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecce
Q 036844 203 ------------------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMG 258 (390)
Q Consensus 203 ------------------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 258 (390)
.....+.++|||+|+||.+.+.-.....+...+.+.+....+... +
T Consensus 173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~~~~~~~i~g~~~~~~~~~~----~------ 242 (375)
T cd00829 173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERARELTDRPVWILGVGAASDTPSL----S------ 242 (375)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhcCCCCeEEEEEEEecCCccc----c------
Confidence 000123469999999998764300001122344433222111000 0
Q ss_pred eEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc--c----------------c
Q 036844 259 IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK--D----------------K 319 (390)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~--e----------------~ 319 (390)
....+ ........+++++|+++|+++ +|| ++=+|-.-....-...+.||+.+ + +
T Consensus 243 -----~~~~~-~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~p 315 (375)
T cd00829 243 -----ERDDF-LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDLP 315 (375)
T ss_pred -----ccccc-cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCcc
Confidence 00000 012334578899999999997 999 99999988888788889999876 3 2
Q ss_pred chhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 320 LWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 320 ~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+..+ --+-.+||...++-+..+.++.++
T Consensus 316 vN~~-GG~la~Ghp~gatG~~~~~e~~~q 343 (375)
T cd00829 316 VNTS-GGLLSKGHPLGATGLAQAVEAVRQ 343 (375)
T ss_pred ccCC-CchhcCCCCccHHHHHHHHHHHHH
Confidence 3221 112337999988877777666664
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4e-14 Score=139.64 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|++++|||.||+++.++ ...+..+..++..+|++.... +++++.+|++++.||..|..+|+
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~V~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQ-TETVNKVCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcc-eeehhhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999998876 234456667889999974332 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.|||+++|++|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-13 Score=138.23 Aligned_cols=260 Identities=16% Similarity=0.151 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcC------------------EEEEEec---------------CC-C-------CCCcH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKIT------------------HLIFSAF---------------YG-V-------DMPGA 135 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id------------------~li~~s~---------------~~-~-------~~p~~ 135 (390)
...|+..|+++||+++|++..+++ .++.++. .+ + ..+..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999998644422 1111111 11 1 34568
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeec---------------ccccc------C
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI---------------RVLDF------H 194 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~---------------~s~~~------~ 194 (390)
+.+|+..+|+.. + ++.+..+|++++.||..|..+|++|..+.+||+++|. .+..- .
T Consensus 155 a~~i~~~~gl~G-~--~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTRG-L--PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCCC-C--ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 899999999964 3 6889999999999999999999999999999999994 11100 0
Q ss_pred CCCccchhhhhhhhhhccCcEEEEeccCCCCC-ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHH
Q 036844 195 EPSETHLDVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGK 273 (390)
Q Consensus 195 ~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 273 (390)
.|.|.+ + .++++||||+|+||++.+... ........+...+... +. +. .....+ ...
T Consensus 232 rpfd~~---r-~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~----d~----------~~--~~~~~~--~~~ 289 (425)
T PRK06501 232 KPFSKD---R-DGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKA----DS----------FH--RTRSSP--DGS 289 (425)
T ss_pred CCCCCC---C-CCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEcc----CC----------CC--CCCCCC--CHH
Confidence 122211 1 368999999999999865300 0000111222222110 00 00 000000 023
Q ss_pred hHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 274 YIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 274 ~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
.+.++++++|+++|+++ +|| ++.+|-.+....+.+ .+.++-....++.+ ..-..+||+.+|+-.+.+...+.
T Consensus 290 ~~~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHH
Confidence 46678999999999997 999 999999876655443 34555322223221 12456799998887777654322
Q ss_pred hhhhhccccCC---------------------CCCceEEEEEEcccccceeeeeEeec
Q 036844 348 KSFEERKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 348 ~~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
. ..+|.+.+= .+.+.++.-+||-|..-.+++|+..+
T Consensus 368 ~-l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 368 T-IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred H-HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1 011322210 00145778889999999999998654
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.2e-14 Score=138.48 Aligned_cols=95 Identities=16% Similarity=0.131 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+..+|+.+|++++|+++|++++|||.|+++++++ ...|..+..++..+|++.... ++.++.+|++++.|+..|..+|+
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p-~~~V~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP-GMQLDRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc-eeehhhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999998887 666888888999999984332 78999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.|||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 104 TGAADVVIAGGAESMSN 120 (404)
T ss_pred cCCCCEEEEeeehhhcc
Confidence 99999999999998873
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-13 Score=136.36 Aligned_cols=233 Identities=13% Similarity=0.010 Sum_probs=156.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+..+|+.+|++++|+++|++++|||.||++++.+ ...+..+..++..||++..+ .++++++|++++.||..|..+|+
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988775 33334478899999998765 68999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccc----------------cC-CCCc---c----------------chh----------------
Q 036844 175 NNPGARVLVVCSDIRVLD----------------FH-EPSE---T----------------HLD---------------- 202 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~~----------------~~-~~~~---~----------------~~~---------------- 202 (390)
+|..++|||+++|.+|.. +. .|.. . +++
T Consensus 98 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~n 177 (385)
T PRK12578 98 SGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMN 177 (385)
T ss_pred CCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999986521 00 0000 0 000
Q ss_pred ------------------------hhhhhhhhccCcEEEEeccCCCCCcc-ccceeEEEeeeeeecCCCCCceeeEeecc
Q 036844 203 ------------------------VLVVQAVFGDGAGAAIIGAGPDISNH-ERTLFQVLSCTQTTIPDTENYITGQLKEM 257 (390)
Q Consensus 203 ------------------------~~~~~~lfGDgAaA~vl~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 257 (390)
.....+.++|||+|+||.+.+.-... ..+...+.+.+....+.. +.
T Consensus 178 p~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~-----~~---- 248 (385)
T PRK12578 178 PKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY-----VA---- 248 (385)
T ss_pred ChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc-----cc----
Confidence 01223356799999999875420000 012234444332211110 00
Q ss_pred eeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 036844 258 GIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD------------------ 318 (390)
Q Consensus 258 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e------------------ 318 (390)
..+++.. ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+.
T Consensus 249 -----~~~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~ 320 (385)
T PRK12578 249 -----RRGEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKV 320 (385)
T ss_pred -----ccccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 0011111 1123467889999999997 999 889999887777777889998652
Q ss_pred cchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 319 KLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 319 ~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
++..+ --+-.+||...|+-+..+.+++.+
T Consensus 321 pvN~~-GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 321 GVNLF-GGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred eeCCC-CCcccCCCCccHHHHHHHHHHHHH
Confidence 22221 012347999988887777777764
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.9e-13 Score=134.76 Aligned_cols=255 Identities=18% Similarity=0.148 Sum_probs=161.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC--CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VD--MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~--~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+.+|+++||+++|++++|||.|++++ ++ +. .+..+..|++.||+.+.+ +++++.+|+++..+++.|..+
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~ 99 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASL 99 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHH
Confidence 4799999999999999999999999999887 34 21 122337899999998765 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-----------cCC------------------------------------------CC--
Q 036844 173 AENNPGARVLVVCSDIRVLD-----------FHE------------------------------------------PS-- 197 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~~-----------~~~------------------------------------------~~-- 197 (390)
|++|..++||||++|+.+.. |.. |.
T Consensus 100 I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~ 179 (386)
T PRK08313 100 VQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH 179 (386)
T ss_pred HHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh
Confidence 99999999999999976421 111 10
Q ss_pred --c--cchh------------hhhhhhhhccCcEEEEeccCCCCCcc-ccceeEEEeeeeeecCCCCCceeeEeecceeE
Q 036844 198 --E--THLD------------VLVVQAVFGDGAGAAIIGAGPDISNH-ERTLFQVLSCTQTTIPDTENYITGQLKEMGIY 260 (390)
Q Consensus 198 --~--~~~~------------~~~~~~lfGDgAaA~vl~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 260 (390)
+ .+.+ .....+.++|||+|+||.+.+.-... ..+...+.+.+....+.. +.
T Consensus 180 ~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-----~~------- 247 (386)
T PRK08313 180 LHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-----FA------- 247 (386)
T ss_pred cCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-----cc-------
Confidence 0 0000 11233456899999999875420000 012224443332211110 00
Q ss_pred EEeCCcchHHHHHhHHHHHHHhhccCCCC--CCCce-eEEEcCCCHHHHHHHHHHcCCCcc------------------c
Q 036844 261 GHLSLDVPVAIGKYIGKCLSNAMSPIGIS--DWNSL-FYVLHPGGDGLIDQVEKNLGLGKD------------------K 319 (390)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~h~~~~~~~~~~~~~lgi~~e------------------~ 319 (390)
.++.+. ......+++++++++|++ + +|| .+=+|-.-....-...|.||+.++ .
T Consensus 248 ---~~~~~~--~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~p 321 (386)
T PRK08313 248 ---GRDQVN--PQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLP 321 (386)
T ss_pred ---cccccc--cHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence 001011 122346888999999997 5 889 888888877777778899998865 2
Q ss_pred chhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccc---c-CCCCCceEEEEEEccccccee
Q 036844 320 LWASRYVLREYGNVGAASVFFILDEVRKKSFEERKA---T-TGEGLDCGVLFGCGPGLTVET 377 (390)
Q Consensus 320 ~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~~~ga 377 (390)
+..+=-.+ . ||-..++-+..+.++.++-. |.. + ++ .++.+..+.|.+...++
T Consensus 322 vN~~GG~l-~-g~p~gatG~~~~~e~~~qlr--G~ag~rQv~~--a~~~l~~~~Gg~~~~~~ 377 (386)
T PRK08313 322 VNPSGGVL-S-SNPIGASGMIRFAEAALQVM--GKAGEHQVDG--ARKALGHAYGGGSQFFS 377 (386)
T ss_pred ccCCCccc-c-cCCCcHHHHHHHHHHHHHhc--ccccCCcCCC--ccEEEEeccCCcceEEE
Confidence 22210012 2 77655666777777766411 211 1 12 25667777764333333
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=137.49 Aligned_cols=256 Identities=16% Similarity=0.101 Sum_probs=163.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEecCC-----------------------CCC--CcHHHHHHHHcC
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSK-IT----HLIFSAFYG-----------------------VDM--PGADVRLVKLLG 144 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~-Id----~li~~s~~~-----------------------~~~--p~~a~~v~~~lg 144 (390)
+....|+..|+++||+++|+++++ ++ .++++++.. ... ...+.+|+..+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 456789999999999999998765 43 355555321 111 457789999999
Q ss_pred C-CCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----c----------------cCCCCccchhh
Q 036844 145 L-KPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----D----------------FHEPSETHLDV 203 (390)
Q Consensus 145 l-~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----~----------------~~~~~~~~~~~ 203 (390)
+ .. + .+.+..+|++++.||..|..+|++|..+.+||+++|..+. . ...|.+.
T Consensus 150 l~~G-p--~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~---- 222 (407)
T cd00828 150 SSHG-P--IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDE---- 222 (407)
T ss_pred cCCC-C--CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcC----
Confidence 9 54 3 6889999999999999999999999999999999998641 0 0112221
Q ss_pred hhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHH
Q 036844 204 LVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSN 281 (390)
Q Consensus 204 ~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 281 (390)
...++++||||+++||++.+. .. ......++.+.+....+.. ...+. ..+.+.+++++
T Consensus 223 ~~~G~~~gEGAaalvLe~~~~-A~~rg~~i~a~i~g~~~~~d~~~------------------~~~~~-~~~~~~~a~~~ 282 (407)
T cd00828 223 TRDGFVEAEGAGVLVLERAEL-ALARGAPIYGRVAGTASTTDGAG------------------RSVPA-GGKGIARAIRT 282 (407)
T ss_pred CCCcEEeecceEEEEEeeHHH-HHHCCCeEEEEEEEEEeccCCCC------------------CCCCC-ChHHHHHHHHH
Confidence 125789999999999998654 11 0011223333222111100 00010 13456678999
Q ss_pred hhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccc
Q 036844 282 AMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKA 355 (390)
Q Consensus 282 ~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i 355 (390)
+|+++|+++ +|| ++..|..+.... +.+.+.++-..+.++.+ .+-..+||+.+|+-++.|...+.. .+++.+
T Consensus 283 Al~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~i 359 (407)
T cd00828 283 ALAKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLI 359 (407)
T ss_pred HHHHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCcc
Confidence 999999997 999 999997665433 33444454321222221 146789999999988888765432 111322
Q ss_pred cCCC---------------------C--CceEEEEEEcccccceeeee
Q 036844 356 TTGE---------------------G--LDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 356 ~~G~---------------------~--~d~vll~~~G~G~~~ga~ll 380 (390)
.+=. . ..+++..+||.|.+-.++++
T Consensus 360 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 360 PPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 2100 0 04678888888877777654
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.2e-13 Score=136.96 Aligned_cols=93 Identities=16% Similarity=0.113 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|+++||+++|++++|||.||++++.+ +..+..+..++..||+.+.+ +++++.+|++++.+|..|..+|
T Consensus 22 ~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I 99 (399)
T PRK06059 22 DFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQI 99 (399)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999887665 33455678999999997654 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeeccc
Q 036844 174 ENNPGARVLVVCSDIRV 190 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s 190 (390)
++|..++|||+++|..+
T Consensus 100 ~sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 100 LAGLCDVALVVGADTTP 116 (399)
T ss_pred HCCCCCEEEEEEEcccC
Confidence 99999999999999865
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.3e-14 Score=138.21 Aligned_cols=259 Identities=14% Similarity=0.127 Sum_probs=164.3
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C-------------------------CCC-cHHHHHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYG-V-------------------------DMP-GADVRLVKL 142 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~-~-------------------------~~p-~~a~~v~~~ 142 (390)
.+...+|+.+|+++||+++|++++++|. ++++++.. . ..+ ..+.++...
T Consensus 68 ~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 147 (407)
T TIGR03150 68 MDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIR 147 (407)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHH
Confidence 3456889999999999999999999886 66665321 0 011 245678889
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCccch
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETHL 201 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~ 201 (390)
+|+... .+.+..+|++++.||..|..+|++|..+.+||+++|..... + ..|.+.
T Consensus 148 ~gl~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~-- 222 (407)
T TIGR03150 148 YGAKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDK-- 222 (407)
T ss_pred hCCCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcC--
Confidence 999643 67789999999999999999999999999999999973210 0 011111
Q ss_pred hhhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
...++++||||+|+||++.+. .. ......++.+.+....... .. .+.. ......+++
T Consensus 223 --~~~g~~~gEGAaalvL~~~~~-A~~~g~~i~a~i~g~~~~~d~~~--------------~~-~~~~---~~~~~~~ai 281 (407)
T TIGR03150 223 --DRDGFVMGEGAGVLVLEELEH-AKARGAKIYAEIVGYGMSGDAYH--------------IT-APAP---EGEGAARAM 281 (407)
T ss_pred --CCCcEEEeceEEEEEEeeHHH-HHHCCCeEEEEEEEEEECCCCCC--------------CC-CCCC---CcHHHHHHH
Confidence 123678999999999997653 11 0011223433221110000 00 0000 012345788
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCH-----HHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGD-----GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~-----~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ +|| ++.+|-.+. .-...+.+.++-...++..+ ..-..+||+.+|+-++.+..++.. ..++
T Consensus 282 ~~Al~~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~-l~~~ 358 (407)
T TIGR03150 282 RAALKDAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLA-IRDG 358 (407)
T ss_pred HHHHHHcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHH-HhcC
Confidence 99999999997 999 999998776 33445667776543344332 123457999888877776655432 1112
Q ss_pred cccC--------------------CC-CCceEEEEEEcccccceeeeeE
Q 036844 354 KATT--------------------GE-GLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 354 ~i~~--------------------G~-~~d~vll~~~G~G~~~ga~ll~ 381 (390)
.+.+ +. ...+++..+||.|.+-.+++|+
T Consensus 359 ~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 359 VVPPTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CcCCCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 2111 10 0146788889988888887764
|
FabB sequences should fall well below the noise cutoff of this model. |
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=136.90 Aligned_cols=95 Identities=17% Similarity=0.142 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|+++++||.||++++.+ .............+|++.... ++.++.+|++++.|+..|..+|+
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p-~~~V~~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVG-CTTVNKMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCcc-EeeccccchHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999998776 333333334444566665332 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|++++|++|.
T Consensus 109 sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 109 AGSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCCEEEEEeeeccCC
Confidence 99999999999999873
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=137.42 Aligned_cols=225 Identities=17% Similarity=0.193 Sum_probs=147.6
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-C-------------------CCCcHHHHHHHHcCCCCcc
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYG-V-------------------DMPGADVRLVKLLGLKPSV 149 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~-~-------------------~~p~~a~~v~~~lgl~~~~ 149 (390)
.+....|+.+|+++||+++|+++++++. |++++..+ + ..+..+..++..+|+.. +
T Consensus 84 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g-~ 162 (421)
T cd00833 84 MDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRG-P 162 (421)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCC-C
Confidence 3556899999999999999999888774 66666432 1 11346778999999975 3
Q ss_pred ccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------------cCCCCccchhhhhhhhhhccC
Q 036844 150 NRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------FHEPSETHLDVLVVQAVFGDG 213 (390)
Q Consensus 150 ~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------------~~~~~~~~~~~~~~~~lfGDg 213 (390)
.+.+..+|++++.||..|..+|++|..+.+||+++|..... ...|.+. ...++++|||
T Consensus 163 --~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~----~~~g~~~geG 236 (421)
T cd00833 163 --SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDA----DADGYVRGEG 236 (421)
T ss_pred --ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCC----CCCCeeeece
Confidence 78899999999999999999999999999999999985310 0112221 1246889999
Q ss_pred cEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCC
Q 036844 214 AGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDW 291 (390)
Q Consensus 214 AaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 291 (390)
|+|+||++.+. .. ......++...+........ ....+ ....+.++++++|+++|+++
T Consensus 237 AaalvL~~~~~-A~~~g~~~~a~i~g~~~~~~~~~~----------------~~~~p--~~~~~~~a~~~al~~Agi~~- 296 (421)
T cd00833 237 VGVVVLKRLSD-ALRDGDRIYAVIRGSAVNQDGRTK----------------GITAP--SGEAQAALIRRAYARAGVDP- 296 (421)
T ss_pred EEEEEEeeHHH-HHHCCCeEEEEEEEEEEcCCCCCC----------------CCcCC--CHHHHHHHHHHHHHHhCCCH-
Confidence 99999997543 10 00112233332211100000 00011 13455688999999999997
Q ss_pred Cce-eEEEcCCCHHH-----HHHHHHHcCCCc---ccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 292 NSL-FYVLHPGGDGL-----IDQVEKNLGLGK---DKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 292 ~di-~~i~h~~~~~~-----~~~~~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
+|| ++.+|-.+... .+.+.+.++-.. ..+..+ ..-..+||+.+|+-++.|...+
T Consensus 297 ~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 297 SDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred HHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 999 99999876433 334444443221 122221 1245689999998887765543
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.1e-13 Score=133.60 Aligned_cols=251 Identities=14% Similarity=0.110 Sum_probs=160.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCC---cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMP---GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p---~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ 171 (390)
++.+|+.+|++++|+++|++++|||.|+++++.+ ...| .....+...++ ... ++++++++|++++.++..|..
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~-p~~~V~~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNI-PAMAVDRQCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCC-cchhhhhhhHHHHHHHHHHHH
Confidence 4899999999999999999999999999998876 3323 22233444444 323 289999999999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccc-c-------C------CCC----cc-------------------chhh--hh-------
Q 036844 172 IAENNPGARVLVVCSDIRVLD-F-------H------EPS----ET-------------------HLDV--LV------- 205 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d~~s~~-~-------~------~~~----~~-------------------~~~~--~~------- 205 (390)
+|++|..++||+++.|++|.. + . ++. +. ++++ .+
T Consensus 108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~ 187 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL 187 (394)
T ss_pred HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 999999999999999977631 0 0 000 00 0000 00
Q ss_pred --h---------------------------------------------------------hhhhccCcEEEEeccCCCCC
Q 036844 206 --V---------------------------------------------------------QAVFGDGAGAAIIGAGPDIS 226 (390)
Q Consensus 206 --~---------------------------------------------------------~~lfGDgAaA~vl~~~~~~~ 226 (390)
. .+..+|||+|+||++... .
T Consensus 188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~-A 266 (394)
T PRK06445 188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKA-V 266 (394)
T ss_pred HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHH-H
Confidence 0 011123333333332111 0
Q ss_pred c-c-ccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCH
Q 036844 227 N-H-ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGD 303 (390)
Q Consensus 227 ~-~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~ 303 (390)
. . ..+..++.+.+ .. ... +.........+++++|+++|+++ +|| ++=+|-.-.
T Consensus 267 ~~~~~~~~a~i~g~~---------------------~~-~~~-~~~~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~ 322 (394)
T PRK06445 267 KKYGLKPMAKIRSFG---------------------FA-GVP-PAIMGKGPVPASKKALEKAGLSV-KDIDLWEINEAFA 322 (394)
T ss_pred HHCCCCceEEEEEEE---------------------Ee-ccC-CchhcchHHHHHHHHHHHcCCCH-HHcCEEEecccch
Confidence 0 0 00001111111 00 000 11111234568899999999997 999 999999877
Q ss_pred HHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 304 GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 304 ~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
...-...|.||+.++++..+ --.-.+||...|+-...+.+++.+- +.+.+ .+.|....|.|..-.+++|+.
T Consensus 323 ~~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL----~~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 323 VVVLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQL----QIKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHHHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHH----HhcCC---CEEEEEEcccCChhhEEEEEc
Confidence 77777889999998876553 2244589999999888888888761 12233 677777777777777787763
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.1e-13 Score=132.56 Aligned_cols=259 Identities=15% Similarity=0.126 Sum_probs=165.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC----------------------C----CCC-cHHHHHHHHc
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG----------------------V----DMP-GADVRLVKLL 143 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~----------------------~----~~p-~~a~~v~~~l 143 (390)
+....|+..|+++||+++|++++++| .|+++++.. + ..+ ..+.++...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 45678999999999999999998888 577665421 1 111 2557889999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c----------------CCCCccchh
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F----------------HEPSETHLD 202 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~----------------~~~~~~~~~ 202 (390)
|+... .+.+..+|++++.||..|..+|++|..+.|||.++|..+.. | ..|.+.
T Consensus 150 gl~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~--- 223 (411)
T PRK07314 150 GAKGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDK--- 223 (411)
T ss_pred CCCCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcC---
Confidence 99753 57788899999999999999999999999999999864310 0 001111
Q ss_pred hhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 203 VLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 203 ~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...++++||||+|+||++.+. .. ......++.+.+....... .. .+.. .......+++
T Consensus 224 -~~dG~~~geGAaavvL~~~~~-A~~~g~~~~a~I~g~~~~~d~~~--------------~~-~~~~---~~~~~~~a~~ 283 (411)
T PRK07314 224 -DRDGFVMGEGAGILVLEELEH-AKARGAKIYAEVVGYGMTGDAYH--------------MT-APAP---DGEGAARAMK 283 (411)
T ss_pred -CCCCEeEEceEEEEEEeeHHH-HHHCCCeEEEEEEEEEEcCCCCC--------------CC-CCCC---CcHHHHHHHH
Confidence 114688999999999987543 11 0011233443322110000 00 0000 0122346888
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
++|+++|+++ +|| ++-.|-.+.... +.+.+.++....++..+ ..-..+||+.+|+-.+.|...+.. .++|.
T Consensus 284 ~Al~~agi~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ 360 (411)
T PRK07314 284 LALKDAGINP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQV 360 (411)
T ss_pred HHHHHcCCCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCC
Confidence 9999999997 999 989998765443 34555666433444332 123567999888766665543321 11132
Q ss_pred ccC-----------------C----CCCceEEEEEEcccccceeeeeEe
Q 036844 355 ATT-----------------G----EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 355 i~~-----------------G----~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.+ + .+.++++..+||-|.+-.+++|+.
T Consensus 361 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 361 IPPTINLDNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred cCCCCCCCCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 221 0 011568888999999999999875
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-12 Score=129.52 Aligned_cols=93 Identities=16% Similarity=0.106 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCC-ccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKP-SVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~-~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
+..+|+.+|++++|+++|+.+++||.++++++.+ . ..+..+..++..+|++. .+ ++.++++|++++.|+..|..+
T Consensus 26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p--~~~V~~aCaSG~~Al~~A~~~ 103 (391)
T PRK07661 26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVP--AITINRYCSSGLQSIAYGAER 103 (391)
T ss_pred CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcc--eeehhhhhhHHHHHHHHHHHH
Confidence 3789999999999999998889999999998776 2 24677778999999985 44 889999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccc
Q 036844 173 AENNPGARVLVVCSDIRV 190 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s 190 (390)
|++|..+.+||++.|++|
T Consensus 104 I~sG~~d~vLv~G~E~ms 121 (391)
T PRK07661 104 IMLGHSEAVIAGGAESMS 121 (391)
T ss_pred HHcCCCCEEEEEEEeecc
Confidence 999999999999999876
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=130.68 Aligned_cols=95 Identities=8% Similarity=-0.010 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCc-HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPG-ADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~-~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
++.+|+.+|++++|+++|++++|||.|++++..+ ...+. .+..+...+|++.... ++.++.+|++++.|+..|+..|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~p-a~~V~~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcc-eEEEeccCchHHHHHHHHHHHH
Confidence 5899999999999999999999999999988766 44343 4456667889986332 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
.+|..+.|||++.|.+|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998763
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=129.69 Aligned_cols=93 Identities=13% Similarity=0.050 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEW-GQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+.+|++++|+++ |++++|||.|++++..+ ...+..+..++..+|++..+ ++.++.+|+++..++..|..+
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHH
Confidence 47899999999999997 99999999999876544 22356678899999997544 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccc
Q 036844 173 AENNPGARVLVVCSDIRV 190 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s 190 (390)
|++|..+.|||++.|++|
T Consensus 104 I~sG~~d~vLv~G~e~~s 121 (406)
T PRK07851 104 IKAGEGDVFISAGVETVS 121 (406)
T ss_pred HHCCCCCEEEEeeEEecc
Confidence 999999999999999865
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.1e-12 Score=123.91 Aligned_cols=261 Identities=15% Similarity=0.152 Sum_probs=164.2
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-cHHHHHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLVKL 142 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~v~~~ 142 (390)
.+....++..|+.+||+++|+++.+.+ .|+++++.. + .++ ..+.++...
T Consensus 71 ~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 150 (414)
T PRK08722 71 MDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIM 150 (414)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHH
Confidence 344667899999999999999754433 356655421 1 112 367889999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c-----C-----------CCCccch
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F-----H-----------EPSETHL 201 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~-----~-----------~~~~~~~ 201 (390)
+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|..... | . .|.|.
T Consensus 151 ~gl~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~-- 225 (414)
T PRK08722 151 RGLRGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDK-- 225 (414)
T ss_pred hCCCCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcC--
Confidence 999874 67889999999999999999999999999999999985311 0 0 12221
Q ss_pred hhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...+++.||||+++||++...- ........++.+.+.. + ++..+. .+.. ......++++
T Consensus 226 --~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~----~----------d~~~~~-~p~~---~~~~~~~a~~ 285 (414)
T PRK08722 226 --DRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS----G----------DAYHMT-SPSE---DGSGGALAME 285 (414)
T ss_pred --CCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc----C----------CCCCCC-CCCc---chHHHHHHHH
Confidence 1247889999999999976440 0000112233332211 0 010000 1110 1123456789
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCC-cccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLG-KDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~-~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
++|+++|+++ +|| ++-.|-.+... .+.+.+.++-. .++++.+ .+-..+||+.+|+-.+.|...+.. .++|
T Consensus 286 ~Al~~agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~ 362 (414)
T PRK08722 286 AAMRDAGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMS-LVDQ 362 (414)
T ss_pred HHHHHcCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHH-HhcC
Confidence 9999999997 999 99899865433 34556666632 2233332 135678999998877766433221 0002
Q ss_pred cccC-----------------C-----CCCceEEEEEEcccccceeeeeEe
Q 036844 354 KATT-----------------G-----EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 354 ~i~~-----------------G-----~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+.+ . ....+++..+||-|.+-++++|+.
T Consensus 363 ~ipp~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 363 IVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred ccCCCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 2111 0 012567888899999888888863
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.2e-12 Score=125.03 Aligned_cols=95 Identities=8% Similarity=-0.020 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
++.+|+.+|++++|+++|+++++||.|++++... .. ....+..+...+|++.... ++.++++|++++.|+..|...|
T Consensus 25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p-~~tV~~~CaSG~~A~~~A~~~I 103 (387)
T PRK07850 25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVG-ATTIDCQCGSAQQANHLVAGLI 103 (387)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCc-eEEEecccccHHHHHHHHHHHH
Confidence 3799999999999999999999999999987654 22 2345667777799985332 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 104 AAGAIDVGIACGVEAMSR 121 (387)
T ss_pred HCCCCCEEEEEeEecCCC
Confidence 999999999999999874
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.4e-11 Score=121.36 Aligned_cols=234 Identities=17% Similarity=0.038 Sum_probs=149.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|++++|+++|++++|||.+++++... + ..+..+..+++.||+...+ ++.+.++|+++..+|..|..+|
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHH
Confidence 4789999999999999999999999999875322 2 2456788899999998655 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc---------------cCCCCcc---------------------------------------
Q 036844 174 ENNPGARVLVVCSDIRVLD---------------FHEPSET--------------------------------------- 199 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~~---------------~~~~~~~--------------------------------------- 199 (390)
++|..++||||++|+++.. |..|...
T Consensus 106 ~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP 185 (392)
T PRK06065 106 ASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNP 185 (392)
T ss_pred hCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCc
Confidence 9999999999999984210 1000000
Q ss_pred --------chh------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeeccee
Q 036844 200 --------HLD------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGI 259 (390)
Q Consensus 200 --------~~~------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 259 (390)
+.+ .....+..+|||+|+||.+.+.-.........+...+....+.. +..
T Consensus 186 ~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~v~I~g~~~~~~~~~-----~~~----- 255 (392)
T PRK06065 186 YAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTPVWVEGVGWTLDNTE-----WPN----- 255 (392)
T ss_pred hhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCccc-----ccc-----
Confidence 000 01223456899999999875420000001122333322211110 000
Q ss_pred EEEeCCcchHHHHHhHHHHHHHhhccCCCCC-CCce-eEEEcCCCHHHHHHHHHHcCCCcc----------------cch
Q 036844 260 YGHLSLDVPVAIGKYIGKCLSNAMSPIGISD-WNSL-FYVLHPGGDGLIDQVEKNLGLGKD----------------KLW 321 (390)
Q Consensus 260 ~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~-~~di-~~i~h~~~~~~~~~~~~~lgi~~e----------------~~~ 321 (390)
.+.. .........+++++++|+++ .+|| .+=+|-.-..+.-...|.||+-+. +++
T Consensus 256 -----~~~~--~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~p 328 (392)
T PRK06065 256 -----RDLA--YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIP 328 (392)
T ss_pred -----cccc--ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCee
Confidence 0000 11122357889999999983 3788 788888765555556688886442 111
Q ss_pred hH-HHHHhhcCCCccchHHHHHHHHHHh
Q 036844 322 AS-RYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 322 ~~-~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
.+ ---+-.+||.+.++-+..+.++.++
T Consensus 329 vN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 329 SSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred ecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 10 0001237999988888888887765
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-12 Score=127.59 Aligned_cols=94 Identities=14% Similarity=0.111 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHH-HHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADV-RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~-~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
.+.+|+.+|++++|+++++++++||.||+++..+ +..+..+. .+++.+|+...+ +++++.+|++++.|+..|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHH
Confidence 3799999999999999999999999999998877 44455555 377888987765 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+||+++|++|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999763
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.5e-12 Score=124.66 Aligned_cols=94 Identities=17% Similarity=0.122 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|++++|||.|++++... ...+..+..+...+|++.... +..++.+|++++.++..|...|+
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTI-CTTVNKVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCc-eEEEeccchHHHHHHHHHHHHHH
Confidence 3799999999999999999999999999876543 223345566888999975442 67789999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 036844 175 NNPGARVLVVCSDIRV 190 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s 190 (390)
+|..+.||+++.|.+|
T Consensus 103 sG~~d~vlv~G~E~~s 118 (394)
T PLN02644 103 LGINDVVVAGGMESMS 118 (394)
T ss_pred cCCCCEEEEEeEEecC
Confidence 9999999999988775
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=6e-12 Score=124.03 Aligned_cols=200 Identities=17% Similarity=0.122 Sum_probs=132.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+..+|+.+|+++||+++|++++|||.|++++.. +..|+ ..+++.||+++.+ ++++..+|+++..+|+.|..+|++
T Consensus 27 t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~s 101 (384)
T PRK06158 27 SAMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEA 101 (384)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHc
Confidence 378999999999999999999999999987632 33343 5799999998765 778899999999999999999999
Q ss_pred CCCCeEEEEE-eecccc-----c------cCC-------------------------------------------CC---
Q 036844 176 NPGARVLVVC-SDIRVL-----D------FHE-------------------------------------------PS--- 197 (390)
Q Consensus 176 g~~~~vLvv~-~d~~s~-----~------~~~-------------------------------------------~~--- 197 (390)
|..++|||+. .+..+. . |.. |.
T Consensus 102 G~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~ 181 (384)
T PRK06158 102 GLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFM 181 (384)
T ss_pred CCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhh
Confidence 9999999984 433221 0 100 00
Q ss_pred --ccchh------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEe
Q 036844 198 --ETHLD------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHL 263 (390)
Q Consensus 198 --~~~~~------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 263 (390)
..+.+ .....+..+|||+|+||.+.+.-.........+...+....... +. .
T Consensus 182 ~~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~~~v~i~g~~~~~~~~~-----~~---------~ 247 (384)
T PRK06158 182 RDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPRPPVYVLGAAAATWHRQ-----IS---------S 247 (384)
T ss_pred CCCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCCCcEEEEEEEEecCCcc-----cc---------c
Confidence 00000 01234567999999999876430100011123333222110000 00 0
Q ss_pred CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc
Q 036844 264 SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD 318 (390)
Q Consensus 264 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e 318 (390)
..... ......+++++++++|+++ +|| ++=+|-.-...--...|.||+.+.
T Consensus 248 ~~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~ 299 (384)
T PRK06158 248 MPDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAK 299 (384)
T ss_pred ccchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCC
Confidence 01111 1223468899999999997 999 888898776666677899998654
|
|
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.46 E-value=9.8e-12 Score=122.10 Aligned_cols=251 Identities=14% Similarity=0.151 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHcCCCC--CCcCEEEEEecCC-C----------------------------CCC-cHHHHHHHHcCCC
Q 036844 99 KLGKEAALKAIKEWGQSV--SKITHLIFSAFYG-V----------------------------DMP-GADVRLVKLLGLK 146 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~--~~Id~li~~s~~~-~----------------------------~~p-~~a~~v~~~lgl~ 146 (390)
.++..|+++||+++|+++ +++. |+++++.+ . .+| ..+..++..+|+.
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~G-v~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCG-VVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEE-EEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 366689999999999864 4454 44555321 0 122 2567888899998
Q ss_pred CccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeec-cccc----c----------CCCCccchhhhhhhhhhc
Q 036844 147 PSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVLD----F----------HEPSETHLDVLVVQAVFG 211 (390)
Q Consensus 147 ~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~-~s~~----~----------~~~~~~~~~~~~~~~lfG 211 (390)
.. .+.+..+|++++.||..|..+|++|..+.+||.++|. .+.. | ..|.|.+ ..++++|
T Consensus 137 Gp---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~----r~G~v~g 209 (381)
T PRK05952 137 GP---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQ----REGLVLG 209 (381)
T ss_pred Cc---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCC----CCCcccc
Confidence 64 6788999999999999999999999999999999996 2210 0 0133322 2478999
Q ss_pred cCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCC
Q 036844 212 DGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISD 290 (390)
Q Consensus 212 DgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~ 290 (390)
|||+++||++...- ........++.+.+......... .+.. -.....++++++|+++|+++
T Consensus 210 EGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~---------------~~~~---~~~~~~~ai~~Al~~agi~p 271 (381)
T PRK05952 210 EGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMS---------------APEP---DGKSAIAAIQQCLARSGLTP 271 (381)
T ss_pred ccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCC---------------CCCC---CHHHHHHHHHHHHHHhCCCH
Confidence 99999999986430 01011123444333221110000 0000 12345678899999999997
Q ss_pred CCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCC------
Q 036844 291 WNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG------ 358 (390)
Q Consensus 291 ~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G------ 358 (390)
+|| ++-.|-.+....+ .+.+.++- +++.+ .+-..+||+.+|+-.+.+...+.. ..++.+.|=
T Consensus 272 -~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~ 345 (381)
T PRK05952 272 -EDIDYIHAHGTATRLNDQREANLIQALFPH---RVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEP 345 (381)
T ss_pred -HHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCC
Confidence 999 9999987655433 44555552 23221 135689999999987777654432 111333220
Q ss_pred ------------CCCceEEEEEEcccccceeeeeE
Q 036844 359 ------------EGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 359 ------------~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
...++++..+||-|..-++++|+
T Consensus 346 ~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 346 EFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred CCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 01257889999999998888886
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.7e-12 Score=126.41 Aligned_cols=236 Identities=15% Similarity=0.049 Sum_probs=146.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCC-----CcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDM-----PGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~-----p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+..+|+.+|++++|+++|++++|||.||++++++ +.. +.....++ +++...+ ++.++.+|++++.||..|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~g~~--~~~v~~~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALWGVP--ASRHEAACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCCCCc--eeecccccHHHHHHHHHH
Confidence 3899999999999999999999999999988765 221 22222222 2333223 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeecccccc-------------C------CC-Ccc----------------ch------------
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDF-------------H------EP-SET----------------HL------------ 201 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~-------------~------~~-~~~----------------~~------------ 201 (390)
+.+|++|.+++|||+++|++|... . .+ ... ++
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~ 180 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFA 180 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999999999865210 0 00 000 00
Q ss_pred ---------------------hh------------hhhhhhhccCcEEEEeccCCCCCccc--cceeEEEeeeeeecCCC
Q 036844 202 ---------------------DV------------LVVQAVFGDGAGAAIIGAGPDISNHE--RTLFQVLSCTQTTIPDT 246 (390)
Q Consensus 202 ---------------------~~------------~~~~~lfGDgAaA~vl~~~~~~~~~~--~~~~~~~~~~~~~~p~~ 246 (390)
++ ....+..+|||+|+||.+++.-.... .+...+.+.+....+..
T Consensus 181 ~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~ 260 (403)
T PRK06289 181 NARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG 260 (403)
T ss_pred HHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc
Confidence 00 00111235888888887654200000 12234544432211100
Q ss_pred CCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc-------
Q 036844 247 ENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD------- 318 (390)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e------- 318 (390)
+....+. ...+... ......+.+++++++|+++ +|| .+-+|-.-....-...|.||+.+.
T Consensus 261 -----~~~~~~~----~~~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 261 -----LEQKLDR----SAGDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred -----ccccccc----ccccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHH
Confidence 0000000 0000011 1123457889999999997 999 888998877777778899998752
Q ss_pred -----------cchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 319 -----------KLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 319 -----------~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
++..+ --.-.+||.+.++-+..+.+++.+
T Consensus 329 ~~G~~~~~G~lpvN~~-GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 329 ENGEIAIGGRLPINPS-GGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred hcCCcccCCCeeEcCC-CCccccCCCccchHHHHHHHHHHH
Confidence 22221 012337999988888888888775
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=125.45 Aligned_cols=232 Identities=15% Similarity=0.079 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC--CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VD--MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~--~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
+..+|+.+|++++|+++|++++|||.|+++++.+ .. .+..+..+...+|+...+ +++++++|++++.||..|..+
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHH
Confidence 4789999999999999999999999999987643 21 111223344556776654 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-------------c-----C---C------------------------------------
Q 036844 173 AENNPGARVLVVCSDIRVLD-------------F-----H---E------------------------------------ 195 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~~-------------~-----~---~------------------------------------ 195 (390)
|++|..++|||+++|++|.. + . .
T Consensus 99 I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~ 178 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA 178 (389)
T ss_pred HHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999986421 0 0 0
Q ss_pred -CCc-----cchhh----------------hhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeE
Q 036844 196 -PSE-----THLDV----------------LVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQ 253 (390)
Q Consensus 196 -~~~-----~~~~~----------------~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 253 (390)
|.- .+.++ ....+.++|||+|+||.+++. ........++...+...... .+
T Consensus 179 nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~-a~~~~~~v~i~g~~~~~~~~-----~~- 251 (389)
T PRK07516 179 NPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAET-ARALQRAVRFRARAHVNDFL-----PL- 251 (389)
T ss_pred CChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHH-HHhcCCCEEEEEEEeccCcc-----cc-
Confidence 000 00000 011224578888888876543 11001122333322211000 00
Q ss_pred eecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 036844 254 LKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD-------------- 318 (390)
Q Consensus 254 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e-------------- 318 (390)
. ..+... ......+++++|+++|+++ +|| ++-+|-......-...|.||+.++
T Consensus 252 --------~-~~~~~~--~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 252 --------S-RRDPLA--FEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred --------c-CCCccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 0 011000 1233468889999999997 999 889998887777778899998764
Q ss_pred --cchhHH-HHHhhcCCCccchHHHHHHHHHHh
Q 036844 319 --KLWASR-YVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 319 --~~~~~~-~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+++.+- --+-.+||...|+-...+.++..+
T Consensus 320 ~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 320 DGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCeeecCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 122210 003358999999988888888765
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=127.01 Aligned_cols=263 Identities=15% Similarity=0.123 Sum_probs=164.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEecCC-C-------------------------CCC-cHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKI-T----HLIFSAFYG-V-------------------------DMP-GADVRL 139 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~I-d----~li~~s~~~-~-------------------------~~p-~~a~~v 139 (390)
...+....|+..|++++|+++|++++++ + .|+++++.. + ..+ ..+.+|
T Consensus 77 ~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 156 (424)
T PRK06333 77 RKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHV 156 (424)
T ss_pred hhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHH
Confidence 3344567899999999999999987766 2 456655422 1 011 245688
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCC
Q 036844 140 VKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPS 197 (390)
Q Consensus 140 ~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~ 197 (390)
...+|+... .+.+..+|++++.||..|..+|++|..+.+||+++|..... + ..|.
T Consensus 157 s~~~gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pf 233 (424)
T PRK06333 157 SIRYGFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPF 233 (424)
T ss_pred HHHhCCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCC
Confidence 899999753 67889999999999999999999999999999999973210 0 0122
Q ss_pred ccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHH
Q 036844 198 ETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIG 276 (390)
Q Consensus 198 ~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~ 276 (390)
+.+ ..+++.||||+++||++...- ........++.+.+... ++..+. .+. + ......
T Consensus 234 d~~----~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~--------------d~~~~~-~~~-~--~~~~~~ 291 (424)
T PRK06333 234 DRD----RDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSA--------------DAYHMT-AGP-E--DGEGAR 291 (424)
T ss_pred CCC----CCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--------------CCCCCC-CCC-C--CcHHHH
Confidence 211 246789999999999875430 00001122343322111 010000 000 0 123456
Q ss_pred HHHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhh
Q 036844 277 KCLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSF 350 (390)
Q Consensus 277 ~~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~ 350 (390)
++++++|+++|+++ +|| ++-.|-.+... ...+.+.++ ....+..+ .....+||+.+|+-.+.+...+.. .
T Consensus 292 ~a~~~Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg-~~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~-l 367 (424)
T PRK06333 292 RAMLIALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFG-HVSGLAVS-STKSATGHLLGAAGGVEAIFTILA-L 367 (424)
T ss_pred HHHHHHHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhC-CCCCceeE-CcccchhhhHHHHHHHHHHHHHHH-H
Confidence 78899999999997 999 99999876543 345666776 22223222 145678999887765554433221 1
Q ss_pred hhccccC------------------C----CCCceEEEEEEcccccceeeeeEee
Q 036844 351 EERKATT------------------G----EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 351 ~~g~i~~------------------G----~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
++|.+.+ + ...++++..+||.|.+..+++|+..
T Consensus 368 ~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~~ 422 (424)
T PRK06333 368 RDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRRW 422 (424)
T ss_pred hcCCcCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEecc
Confidence 1122111 0 0015678889999999899888753
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.1e-13 Score=103.77 Aligned_cols=66 Identities=21% Similarity=0.245 Sum_probs=55.0
Q ss_pred eeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 153 MIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 153 ~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
||++++|+|++.||++|..+++++..++||||++|+.+. +.++. ++....+|||||+|+||++++.
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~-----~~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRT-----DRQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTT-----HHHHHTTB-EEEEEEEEEEESS
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-ccccc-----ccCcceeecchheEEEEEecCC
Confidence 689999999999999999999999999999999999997 44432 3456789999999999999753
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.2e-11 Score=122.39 Aligned_cols=257 Identities=16% Similarity=0.102 Sum_probs=160.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g 176 (390)
..+|+.+|+++||+++|++++|||.+++++..+.... ...++..+|+...+ ++.++.+|++++.+|..|..+|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999988776552221 13466789997644 6789999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-cC---------------------CCC-cc-------------------chhh-----------
Q 036844 177 PGARVLVVCSDIRVLD-FH---------------------EPS-ET-------------------HLDV----------- 203 (390)
Q Consensus 177 ~~~~vLvv~~d~~s~~-~~---------------------~~~-~~-------------------~~~~----------- 203 (390)
..++||+++.|..+.. +. .+. .. ++++
T Consensus 98 ~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~ 177 (391)
T PRK08256 98 AADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRH 177 (391)
T ss_pred CCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 9999999999987520 00 000 00 0000
Q ss_pred -----------------------------hhhhhhhccCcEEEEeccCCCCCcc-ccceeEEEeeeeeecCCCCCceeeE
Q 036844 204 -----------------------------LVVQAVFGDGAGAAIIGAGPDISNH-ERTLFQVLSCTQTTIPDTENYITGQ 253 (390)
Q Consensus 204 -----------------------------~~~~~lfGDgAaA~vl~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~ 253 (390)
....+..+|||+|+||.+.+.-... ..+..++.+.+.... ....+ .
T Consensus 178 A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~--~~~~~--~ 253 (391)
T PRK08256 178 AANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTD--TPSTF--D 253 (391)
T ss_pred hhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEecc--ccccc--c
Confidence 0112234788888888765420000 012234433221110 00000 0
Q ss_pred eecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 036844 254 LKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD-------------- 318 (390)
Q Consensus 254 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e-------------- 318 (390)
.+ +. .... .......+++++++++|+++ +|| .+-+|..-....-...|.||+.++
T Consensus 254 ~~-~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~ 323 (391)
T PRK08256 254 GR-SM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTY 323 (391)
T ss_pred cc-cc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 00 00 0000 01223467889999999997 999 899999887777788899999876
Q ss_pred ----cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhh-c--cccCCCCCceEEEEEEcccccc
Q 036844 319 ----KLWASRYVLREYGNVGAASVFFILDEVRKKSFEE-R--KATTGEGLDCGVLFGCGPGLTV 375 (390)
Q Consensus 319 ----~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~-g--~i~~G~~~d~vll~~~G~G~~~ 375 (390)
.+..+ --.-.+||...|+-+..+.++.++-.-+ | .++.. ...+..+.|.|.+.
T Consensus 324 ~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~ 383 (391)
T PRK08256 324 GGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGAC 383 (391)
T ss_pred CCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeE
Confidence 33322 0112379999888888888877752100 1 12222 56777777755443
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.4e-12 Score=123.63 Aligned_cols=95 Identities=13% Similarity=0.082 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
.+.+|+..|++++|+++|+++++||.|++++..+ ......+..++..+|++.... ++.++++|++++.|+..|..+|+
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p-~~~V~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVP-GYTINKVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCcc-chhhcchhHHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999998765 434456677888999985332 88999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999999874
|
|
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.9e-12 Score=125.33 Aligned_cols=257 Identities=12% Similarity=0.100 Sum_probs=159.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCC---CCCcCEEEEEecC---------------C-CC--------CC-cHHHHHHHHcCCC
Q 036844 95 DEVPKLGKEAALKAIKEWGQS---VSKITHLIFSAFY---------------G-VD--------MP-GADVRLVKLLGLK 146 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~---~~~Id~li~~s~~---------------~-~~--------~p-~~a~~v~~~lgl~ 146 (390)
.....|+..|+++||+++|++ +++|+.++.++.. + +. ++ ..+.+|+..||+.
T Consensus 78 ~~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~ 157 (410)
T PRK07103 78 SLSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR 157 (410)
T ss_pred CHHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC
Confidence 346789999999999999985 4566666654321 1 11 12 2567788999997
Q ss_pred CccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc---------c-------------cCCCCccchhh
Q 036844 147 PSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL---------D-------------FHEPSETHLDV 203 (390)
Q Consensus 147 ~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~---------~-------------~~~~~~~~~~~ 203 (390)
.. .+.+..+|++++.||..|..+|++|..+.+||+++|.. +. . ...|.|.+
T Consensus 158 G~---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--- 231 (410)
T PRK07103 158 GE---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--- 231 (410)
T ss_pred CC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC---
Confidence 53 57789999999999999999999999999999988641 10 0 00122211
Q ss_pred hhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHh
Q 036844 204 LVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNA 282 (390)
Q Consensus 204 ~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 282 (390)
..++++||||+++||++.+.- ........++.+.+.... +.... .+. .....++++++
T Consensus 232 -~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d--------------~~~~~-~p~-----~~~~~~a~~~A 290 (410)
T PRK07103 232 -RDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLD--------------ANRGP-DPS-----LEGEMRVIRAA 290 (410)
T ss_pred -CCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecC--------------CCCCC-CCC-----HHHHHHHHHHH
Confidence 247899999999999975430 000011234443322210 00000 011 12345788999
Q ss_pred hccCCCCCCCce-eEEEcCCCHHHHHHHHH--HcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccC--
Q 036844 283 MSPIGISDWNSL-FYVLHPGGDGLIDQVEK--NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATT-- 357 (390)
Q Consensus 283 L~~~gl~~~~di-~~i~h~~~~~~~~~~~~--~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~-- 357 (390)
|+++|+++ +|| ++..|-.+....+.++- .++.....++.+ .+-..+||+.+|+-.+.|...+.. .++|.+.|
T Consensus 291 l~~Agi~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~ 367 (410)
T PRK07103 291 LRRAGLGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSR 367 (410)
T ss_pred HHHcCCCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCC
Confidence 99999997 999 99999877654333211 122211222221 124567999999888877654321 01122211
Q ss_pred --------------C----CCCceEEEEEEcccccceeeeeE
Q 036844 358 --------------G----EGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 358 --------------G----~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
. ....+++..+||.|..-.+++|+
T Consensus 368 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 368 NLDEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCCCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 00156788899999998998886
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=8.1e-12 Score=122.86 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=87.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
.+.+|+..+++.+|+++++++++||.||++...+ - ..++++..+.-..|++..+. ++.++..|+|++.|+.+|+..|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp-~~tvnr~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKAS-GVTLDRFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCC-eeeeccccchHHHHHHHHHHHH
Confidence 3899999999999999999999999999998876 2 35788999999999998775 9999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|..+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999984
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.7e-11 Score=121.06 Aligned_cols=259 Identities=14% Similarity=0.128 Sum_probs=161.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCC---cC----EEEEEecCC-C------------------------CCC-cHHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSK---IT----HLIFSAFYG-V------------------------DMP-GADVRLVK 141 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~---Id----~li~~s~~~-~------------------------~~p-~~a~~v~~ 141 (390)
+....|+..|+++||+++|++++. ++ .|++++... . ..+ ..+..|+.
T Consensus 197 d~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 276 (540)
T PLN02787 197 DKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAM 276 (540)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHH
Confidence 345679999999999999987642 21 466666532 1 011 23567888
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCccc
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F----------HEPSETH 200 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~ 200 (390)
.+|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|..... + ..|.|.+
T Consensus 277 ~~gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~ 353 (540)
T PLN02787 277 DLGWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN 353 (540)
T ss_pred HhCCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC
Confidence 9999864 67889999999999999999999999999999999963100 0 0122221
Q ss_pred hhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 201 LDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 201 ~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
..++++|+||+++||++.+.- ........++.+.+... +++.++ .+.--...+.++|
T Consensus 354 ----rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~--------------Da~~~t----~p~p~g~g~~~am 411 (540)
T PLN02787 354 ----RDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTC--------------DAYHMT----EPHPEGAGVILCI 411 (540)
T ss_pred ----CCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEec--------------CCCCCC----CCCcCHHHHHHHH
Confidence 248899999999999975430 11001122343322111 111000 0000123355788
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ +|| |+-.|-.+... .+.+.+.+|-.+ .++.+ .+-..+||+.+|+-.+.+...+.. +++|
T Consensus 412 ~~AL~~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~~g 487 (540)
T PLN02787 412 EKALAQSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IRTG 487 (540)
T ss_pred HHHHHHcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-HhcC
Confidence 99999999997 999 99999876543 445566676322 22221 135579999988866665543321 0013
Q ss_pred cccCC----------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 354 KATTG----------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 354 ~i~~G----------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+.|- ..-+.+|..+||-|..-.+++|+.
T Consensus 488 ~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 488 WVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 22210 001456778899998888888874
|
|
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-11 Score=112.42 Aligned_cols=200 Identities=17% Similarity=0.139 Sum_probs=124.0
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
|++....|..+|++.+|+++++.++|||.++-+.-..+..+ +++.++.|++| ++.+..+|+++..+|.+|+.+
T Consensus 47 wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~ 119 (329)
T PF07451_consen 47 WEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGIP-----FLGLYGACSTMMESLALAAML 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT-------EEEB--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHH
Confidence 55668899999999999999999999999998776666654 48999999987 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccc---cccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 173 AENNPGARVLVVCSDIRV---LDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s---~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
+.+|..++||+.++.... ++|+.|.+...+.+.+..+---||+|+||++.+.. +...-...+..
T Consensus 120 vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~-----p~It~~T~GkV-------- 186 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSG-----PRITHATIGKV-------- 186 (329)
T ss_dssp HHTTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--S-----EEEEEEE------------
T ss_pred HhCCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCC-----cEEEEEEEEEE--------
Confidence 999999999999998875 46777766544445567777889999999987651 12222211111
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcC---CCHHHHHHHHHHcCCCcccc
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHP---GGDGLIDQVEKNLGLGKDKL 320 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~---~~~~~~~~~~~~lgi~~e~~ 320 (390)
+++.+.+ ..+.-..........|.+.|+..|.++ +|. .++.-. .+..++..+.++-|++.++.
T Consensus 187 vD~G~~D-------~~nMGaAMAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~ 253 (329)
T PF07451_consen 187 VDMGIKD-------PNNMGAAMAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISEN 253 (329)
T ss_dssp B-SS----------TT-HHHHHHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGG
T ss_pred EEcCCCC-------cccchhhHhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccc
Confidence 1111110 111112334445567888899999997 887 666654 35688888888888887653
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-11 Score=121.19 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|+++++||.|+++++.+ ...+.++..++..+|++.... ++.++++|++++.|+..|+..|+
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P-~~tV~~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD-AYSVSRACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc-ceeehhhhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998765 333556777889999985332 88999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.||+++.|++|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999999874
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-11 Score=121.22 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+..|++++|++ +|+++++||.||+++..+ ...+..+..+...+|++.... ++.+++.|++++.|+..|...
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp-~~tV~~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVP-GSTINRLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEeccchhHHHHHHHHHHH
Confidence 3799999999999997 599999999999998775 324778899999999997443 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|.+|..+.+|+++.|++|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999874
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=119.93 Aligned_cols=221 Identities=14% Similarity=0.194 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g 176 (390)
+.+|+..|++++++ |++ ++||.||+++..+.. ...+..+...+|++.... ++.++.+|++++.|+..|..+|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~-~~~~r~~~~~~Gl~~~~p-~~tV~~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG-GNVARLSALEAGLGLHIP-GVTIDRQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc-chHHHHHHHHcCCCCCCC-ceehhhhhhHHHHHHHHHHHHHHCC
Confidence 78999999999865 886 899999999875522 444556888999984332 8899999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-cC-CC-------Ccc---------------chhh-----------------------------
Q 036844 177 PGARVLVVCSDIRVLD-FH-EP-------SET---------------HLDV----------------------------- 203 (390)
Q Consensus 177 ~~~~vLvv~~d~~s~~-~~-~~-------~~~---------------~~~~----------------------------- 203 (390)
..+.+|+++.|.+|.. +. .. .+. ++++
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 10 00 000 0000
Q ss_pred ------h-h--------h--hhh--------------hccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCce
Q 036844 204 ------L-V--------V--QAV--------------FGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 204 ------~-~--------~--~~l--------------fGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
. . . ..+ .+|||+|+||.+.+. .. ...+..++.......
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~-A~~lg~~p~~~i~~~~~~~-------- 250 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQ-ARKLGYKPVLRFVRSAVVG-------- 250 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHH-HHHcCCCceEEEEEEEEec--------
Confidence 0 0 0 011 145666665554322 00 001111222211110
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH---HHH
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS---RYV 326 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~---~~~ 326 (390)
.....+ ......+++++|+++|+++ +|| +|.+|+..........+.||++++++..+ ...
T Consensus 251 ------------~~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~ 314 (361)
T PRK06690 251 ------------VDPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIAL 314 (361)
T ss_pred ------------cCcccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhc
Confidence 001111 1234568899999999997 999 99999999999999999999998776541 001
Q ss_pred HhhcCCCccchHHHHHHHHHH
Q 036844 327 LREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 327 ~~~~Gn~~sas~~l~L~~~~~ 347 (390)
...+|++|+..++..+.++.+
T Consensus 315 Ghp~GatG~~~~~~~~~ql~~ 335 (361)
T PRK06690 315 GHPYGASGAMLVTRLFYQAKR 335 (361)
T ss_pred cCchhhhHHHHHHHHHHHHHH
Confidence 345666666666666666544
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-11 Score=123.26 Aligned_cols=258 Identities=14% Similarity=0.114 Sum_probs=163.4
Q ss_pred hHHHHHHHHHHHHHHHcCCC-CCCcCE----EEEEecCC-CC-------------------------CC-cHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQS-VSKITH----LIFSAFYG-VD-------------------------MP-GADVRLVKLL 143 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~-~~~Id~----li~~s~~~-~~-------------------------~p-~~a~~v~~~l 143 (390)
...+|+..|+++||+++|++ +++++. ++++++.. .. .+ ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 46889999999999999998 666543 44444322 10 11 2456788888
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCCccch
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------F-----------HEPSETHL 201 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~~~~~ 201 (390)
|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|..... + ..|.+.+
T Consensus 156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~- 231 (421)
T PTZ00050 156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKD- 231 (421)
T ss_pred CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCC-
Confidence 98864 57889999999999999999999999999999999973210 0 0011111
Q ss_pred hhhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
..+++.||||+++||++... .. ......++.+.+... ++..+. .+.. ......+++
T Consensus 232 ---~~G~~~gEGAaalvLe~~~~-A~~~g~~i~a~i~g~~~~~--------------d~~~~~-~p~~---~~~~~~~ai 289 (421)
T PTZ00050 232 ---RAGFVMGEGAGILVLEELEH-ALRRGAKIYAEIRGYGSSS--------------DAHHIT-APHP---DGRGARRCM 289 (421)
T ss_pred ---CCCEeeccceEEEEEeeHHH-HHHCCCeEEEEEEEEEEcC--------------CCCCCC-CCCC---ChHHHHHHH
Confidence 24678999999999998653 11 001112333322211 010000 0000 123345788
Q ss_pred HHhhcc-CCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCc-ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhh
Q 036844 280 SNAMSP-IGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGK-DKLWASRYVLREYGNVGAASVFFILDEVRKKSFE 351 (390)
Q Consensus 280 ~~~L~~-~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~ 351 (390)
+++|++ +|+++ +|| ++-+|-.+...- +.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. .+
T Consensus 290 ~~Al~~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~ 366 (421)
T PTZ00050 290 ENALKDGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LY 366 (421)
T ss_pred HHHHHhccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HH
Confidence 999999 99997 999 999998766332 45566666322 223222 134578999999988777655432 11
Q ss_pred hccccCC-----------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 352 ERKATTG-----------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 352 ~g~i~~G-----------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++.+.+- .....+|..+||-|.+-.+++|+.
T Consensus 367 ~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 367 EQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred cCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 1332210 001578889999999999999874
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-11 Score=121.93 Aligned_cols=95 Identities=15% Similarity=0.052 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+..|++++|++ +|+++++||.|++++... +..+..+..++..+|++.... ++.++++|++++.|+..|...
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p-~~~V~~~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVP-GTTVNRLCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEeechhhhHHHHHHHHHHH
Confidence 3789999999999995 799999999999998764 334677888999999986332 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|.+|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHCCCCCEEEEeccccccC
Confidence 9999999999999999974
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=120.75 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+..|++++|++ +|+++++||.|++++..+ . ..+..+..++..+|++.... ++.++++|++++.|+..|...
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP-~~tV~~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVP-GTTINRLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCc-eEEEecccccHHHHHHHHHHH
Confidence 3789999999999995 799999999999998765 2 24667788999999976443 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999874
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.1e-11 Score=119.77 Aligned_cols=253 Identities=13% Similarity=0.136 Sum_probs=160.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCC------CCcCEEEEEecCC-C-------------------------CCC-cHHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQSV------SKITHLIFSAFYG-V-------------------------DMP-GADVRLVK 141 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~------~~Id~li~~s~~~-~-------------------------~~p-~~a~~v~~ 141 (390)
+....|+..|+++||+++|+.. +.+ .|+++++.+ . .+| ..+.+|+.
T Consensus 71 ~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (405)
T PRK09116 71 GRVSLMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGL 149 (405)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHH
Confidence 4467899999999999999842 223 455655322 0 123 25678899
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c----------------CCCCccch
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F----------------HEPSETHL 201 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----~----------------~~~~~~~~ 201 (390)
.+|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|..+.. | ..|.|.+
T Consensus 150 ~~~~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~- 225 (405)
T PRK09116 150 FFGLKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDAN- 225 (405)
T ss_pred HhCCCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCC-
Confidence 9999874 57889999999999999999999999999999999974310 0 0122211
Q ss_pred hhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
..++++|+||+++||++...- ........++.+.+... ++... ..+ ....+.++++
T Consensus 226 ---~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--------------d~~~~-~~p-----~~~~~~~ai~ 282 (405)
T PRK09116 226 ---RDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--------------DGAHV-TQP-----QAETMQIAME 282 (405)
T ss_pred ---CCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--------------CCCcC-CCC-----CHHHHHHHHH
Confidence 247899999999999975430 01001122343332211 11000 011 1234568899
Q ss_pred HhhccCCCCCCCce-eEEEcCCCH-----HHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGD-----GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~-----~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
++|+++|+++ +|| ++.+|-.+. .-...+.+.+|- +++.+ .+-..+||+.+|+-.+.+...+.. .++|.
T Consensus 283 ~AL~~Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ 356 (405)
T PRK09116 283 LALKDAGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGW 356 (405)
T ss_pred HHHHHhCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCc
Confidence 9999999997 999 999997554 334566677762 12221 135678999877666554433321 00022
Q ss_pred ccC---------CC-------------CCceEEEEEEcccccceeeeeE
Q 036844 355 ATT---------GE-------------GLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 355 i~~---------G~-------------~~d~vll~~~G~G~~~ga~ll~ 381 (390)
+.| .. ..+++|..+||-|..-++++|+
T Consensus 357 ippt~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 357 FAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred cCCCCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 211 00 0156788999999888888875
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.4e-11 Score=118.06 Aligned_cols=94 Identities=15% Similarity=0.047 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|++++|||.|++++..+ ...+..+..++..+|++.... .+.++.+|++++.++..|...|.
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT-KYTVNVVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc-ceeeechhhHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999887654 223345677889999985322 77888999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 036844 175 NNPGARVLVVCSDIRV 190 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s 190 (390)
+|..+.||+++.|++|
T Consensus 104 sG~~d~vla~G~e~ms 119 (388)
T PRK06366 104 LGERDLVIAGGMENMS 119 (388)
T ss_pred cCCCCEEEEEeeEccc
Confidence 9999999998889876
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-10 Score=115.10 Aligned_cols=212 Identities=14% Similarity=0.089 Sum_probs=139.8
Q ss_pred cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc--------------cCCCCcc
Q 036844 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD--------------FHEPSET 199 (390)
Q Consensus 134 ~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~--------------~~~~~~~ 199 (390)
..+.+|+..||+... .+.+..+|++++.||..|..+|++|..+.|||+++|..+.. ...|.+.
T Consensus 138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 577899999999763 67889999999999999999999999999999999964320 1113222
Q ss_pred chhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 200 HLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 200 ~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
+ ..++++||||+++||++... . ..++.+.+....... +. .+. + ....+.+++
T Consensus 215 ~----~~G~~~gEGaa~vVLe~~~~-~-----~~~I~g~g~~~d~~~---~~------------~~~-~--~~~~~~~a~ 266 (392)
T PRK09185 215 N----RDGINIGEAAAFFLLEREDD-A-----AVALLGVGESSDAHH---MS------------APH-P--EGLGAILAM 266 (392)
T ss_pred C----CCccceeceEEEEEEEEcCC-C-----cEEEEEEEEeCCCCC---CC------------CCC-C--CHHHHHHHH
Confidence 1 14689999999999998733 1 234544332211100 00 000 0 112345788
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ +|| ++.+|-.+... ...+.+.++-+. .+.. +-..+||+.+|+-.+.|...+.. .++|
T Consensus 267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~s---~K~~~Gh~~~AaG~~~l~~~~~~-l~~~ 340 (392)
T PRK09185 267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCSS---TKGLTGHTLGAAGAVEAAICWLA-LRHG 340 (392)
T ss_pred HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ceeC---CCcccccChhhcchHHHHHHHHH-HhcC
Confidence 99999999997 999 99999876543 344556665321 1221 34568999999877776654432 0112
Q ss_pred cccCC---------C------------CCceEEEEEEcccccceeeeeEe
Q 036844 354 KATTG---------E------------GLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 354 ~i~~G---------~------------~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+.+= . ..++++..+||-|.+-.+++|+.
T Consensus 341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~ 390 (392)
T PRK09185 341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGR 390 (392)
T ss_pred CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEe
Confidence 22110 0 01578899999999999999875
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.36 E-value=8e-11 Score=117.06 Aligned_cols=254 Identities=15% Similarity=0.088 Sum_probs=159.9
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-cHHHHHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLVKL 142 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~v~~~ 142 (390)
.+....|+..|+++||+++|+++++++ .+++++... . ..+ ..+.+|...
T Consensus 69 ~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (406)
T PRK08439 69 ADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIE 148 (406)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHH
Confidence 344688999999999999999887775 355544321 0 112 467789999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc----------cc----------CCCCccch
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL----------DF----------HEPSETHL 201 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~----------~~----------~~~~~~~~ 201 (390)
+|+... .+.+..+|++++.||..|..+|++|..+.+|++++|.. +. .+ ..|.|.
T Consensus 149 ~gl~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~-- 223 (406)
T PRK08439 149 HGLKGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDK-- 223 (406)
T ss_pred hCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccC--
Confidence 999864 56778999999999999999999999999999999963 10 00 012221
Q ss_pred hhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...++++||||+++||++...- ........++.+.+.. . ++..+. .+. .+...++++
T Consensus 224 --~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~----~----------d~~~~~-~p~-----~~~~~~a~~ 281 (406)
T PRK08439 224 --DRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES----G----------DANHIT-SPA-----PEGPLRAMK 281 (406)
T ss_pred --CCCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc----C----------CCCCCC-CCC-----HHHHHHHHH
Confidence 1247899999999999975430 1100111223322111 0 110000 111 134567888
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH---HHhhhh
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV---RKKSFE 351 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~---~~~~~~ 351 (390)
++|+++|+ ++| |+-.|-.+... .+.+.+.++-.......+ .+-..+||+.+|+-.+.+... +++
T Consensus 282 ~al~~ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~l~~--- 354 (406)
T PRK08439 282 AALEMAGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMAMRD--- 354 (406)
T ss_pred HHHHHcCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHHHhC---
Confidence 99999886 567 88888866543 344566666332222221 134569999999877655433 232
Q ss_pred hccccCC---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 352 ERKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 352 ~g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
|.+.+- .....+|..+||-|.+-++++|+.
T Consensus 355 -~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 355 -GILPPTINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred -CeeCCCCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 322210 001567889999999999999874
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.9e-11 Score=115.63 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=79.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
.+.+|+..|++++|+++|+++++||.+|+++..+ . ..+..+..+.-..|++.... ++.++.+|++++.|+..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP-~~tV~~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVP-GTSIDRQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCc-eEEEechhhHHHHHHHHHHHHH
Confidence 3799999999999999999999999999987764 2 22445544444447764433 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999874
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.9e-11 Score=117.61 Aligned_cols=254 Identities=13% Similarity=0.076 Sum_probs=157.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|++++|+++|++++|||.|++++... ...+..+..+.-.+|++... +.+.++.+|++++.++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~-p~~~v~~acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV-PGVTVDRQCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC-ceeeecchhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999875422 11233344333356775433 26778999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc-cc------C----------------CCCc--c----------------chhh---------
Q 036844 174 ENNPGARVLVVCSDIRVL-DF------H----------------EPSE--T----------------HLDV--------- 203 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~-~~------~----------------~~~~--~----------------~~~~--------- 203 (390)
++|..+.||+++.|.+|. .+ . ++.. . ++++
T Consensus 104 ~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~ 183 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESH 183 (382)
T ss_pred HCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999986642 10 0 0000 0 0000
Q ss_pred -h-h----------------------------------hhhhh-------------ccCcEEEEeccCCCCCcc-cccee
Q 036844 204 -L-V----------------------------------VQAVF-------------GDGAGAAIIGAGPDISNH-ERTLF 233 (390)
Q Consensus 204 -~-~----------------------------------~~~lf-------------GDgAaA~vl~~~~~~~~~-~~~~~ 233 (390)
+ . ...++ +|||+|+||.+.+..... ..+..
T Consensus 184 ~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~ 263 (382)
T PRK07801 184 RRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRA 263 (382)
T ss_pred HHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccE
Confidence 0 0 00011 355555555543220000 00111
Q ss_pred EEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHH
Q 036844 234 QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKN 312 (390)
Q Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~ 312 (390)
++.+.. ...... ..........++++++++|+++ +|| ++=+|-.-....-...|.
T Consensus 264 ~i~~~~---------------------~~~~~~--~~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~ 319 (382)
T PRK07801 264 RIHHLS---------------------VRGDDP--VFMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKE 319 (382)
T ss_pred EEEEEE---------------------EecCCh--HhhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHH
Confidence 222110 000000 0011122357889999999997 999 888888776777777899
Q ss_pred cCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 313 LGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 313 lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
||+.++++..+ --.-.+||...|+-...+.+++++-. + .| ..+.+....|.|.+..+++|+.
T Consensus 320 lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~--~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 320 TGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TG--GRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred hCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cC--CCEEEEEEcccccceeEEEEEe
Confidence 99988876553 22455899999998888888887521 1 23 1455655566666666666653
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-10 Score=113.56 Aligned_cols=250 Identities=12% Similarity=0.005 Sum_probs=159.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC-----CcCEEEEEecCC-C-------------------------------------C
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVS-----KITHLIFSAFYG-V-------------------------------------D 131 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~-----~Id~li~~s~~~-~-------------------------------------~ 131 (390)
+....|+..|+++||+++|++.. ++. |+++++.+ . .
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~G-vivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 149 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMD-MIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQ 149 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceE-EEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhh
Confidence 34678999999999999998543 333 44444332 1 0
Q ss_pred CC-cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCCCCccc
Q 036844 132 MP-GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFHEPSETH 200 (390)
Q Consensus 132 ~p-~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~~~~~~ 200 (390)
+| ..+..|...+|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|.... .+.......
T Consensus 150 ~~n~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~ 226 (398)
T PRK06519 150 LSNLLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWA 226 (398)
T ss_pred hhhHHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCC
Confidence 11 255778889999874 5788999999999999999999999999999999986321 011100000
Q ss_pred h-hhh----hhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHh
Q 036844 201 L-DVL----VVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKY 274 (390)
Q Consensus 201 ~-~~~----~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~ 274 (390)
+ .+. ..+++.|+||+++||++.+.- ........++.+...... .. . ...
T Consensus 227 p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~---------------------~~-~---~~~ 281 (398)
T PRK06519 227 PVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRA---------------------RR-A---PGD 281 (398)
T ss_pred chhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCC---------------------CC-C---hHH
Confidence 0 011 358899999999999986540 111111224443211100 00 0 123
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+.++|+++|+++|+ + +|| |+..|-.+... .+.+.+.++.|.. . +-..+||+.+|+-.+.+...+..
T Consensus 282 ~~~am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvs---S---~Ks~~GH~l~AAGa~e~i~~~la 353 (398)
T PRK06519 282 LEASLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGPVR---G---IGTLFGHTMEAQFPLGLALAALS 353 (398)
T ss_pred HHHHHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCcc---c---cchhhccchHHHHHHHHHHHHHH
Confidence 56799999999999 7 899 99999876543 4456677776522 2 35679999999877776544432
Q ss_pred hhhhccccCCCCC----------ceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATTGEGL----------DCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~G~~~----------d~vll~~~G~G~~~ga~ll~~ 382 (390)
..+|.+.|-.+. ...|.+++|-|-.-|.++++.
T Consensus 354 -l~~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 354 -VSKGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred -HhcCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEEe
Confidence 111444332221 236778888766666666653
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=7e-11 Score=116.80 Aligned_cols=95 Identities=16% Similarity=0.080 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
++.+|+.+|++++|+++|+++++||.+++++..+ ...+..+..+...+|++.... ++.++++|++++.|+..|...|
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p-~~tV~~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVP-GQTVNRLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCc-eeeeechhhhHHHHHHHHHHHH
Confidence 4899999999999999999999999999998765 233566777889999985433 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999874
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.4e-11 Score=119.96 Aligned_cols=261 Identities=13% Similarity=0.024 Sum_probs=160.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCC-----CCcCEEEEEecCC-C-------------------------CCC-cHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSV-----SKITHLIFSAFYG-V-------------------------DMP-GADVRLVKLL 143 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~-----~~Id~li~~s~~~-~-------------------------~~p-~~a~~v~~~l 143 (390)
....|+..|+.+||+++|+++ .+...|+++++.+ . .++ ..+.+|...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 356799999999999999854 2456777776432 1 011 2456888999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc---------------c-------cCCCCccch
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL---------------D-------FHEPSETHL 201 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~---------------~-------~~~~~~~~~ 201 (390)
|+... .+.+..+|++++.||..|..+|++|..+.+||.++|.... . ...|.+.
T Consensus 172 gl~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~-- 246 (437)
T PLN02836 172 GFQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC-- 246 (437)
T ss_pred CCCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc--
Confidence 98864 6789999999999999999999999999999999886310 0 0112221
Q ss_pred hhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...++++||||+++||++.+.- ........++.+.+... ++.... .+. .-.....++++
T Consensus 247 --~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~--------------d~~~~~-~p~---~~~~~~~~a~~ 306 (437)
T PLN02836 247 --DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSG--------------DAHHIT-QPH---EDGRGAVLAMT 306 (437)
T ss_pred --CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecC--------------CCCCCc-CCC---cchHHHHHHHH
Confidence 1247889999999999976430 00001123344332110 010000 010 01233456789
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCc--ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhh
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGK--DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEE 352 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~ 352 (390)
++|+++|+++ +|| ++-.|-.+...- +.+.+.++-.. ..+..+ .+-..+||+.+|+-.+.|...+.. .++
T Consensus 307 ~Al~~Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~ 383 (437)
T PLN02836 307 RALQQSGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHH 383 (437)
T ss_pred HHHHHcCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-Hhc
Confidence 9999999997 999 999998765433 33445554211 112211 124567999988876655443221 001
Q ss_pred ccccC----------------------CCCCceEEEEEEcccccceeeeeEeec
Q 036844 353 RKATT----------------------GEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 353 g~i~~----------------------G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
|.+.+ ....+.+|..+||-|.+-.+++|+..+
T Consensus 384 ~~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 384 GIAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 22111 001145677789999999999987643
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=99.34 E-value=7.9e-11 Score=116.74 Aligned_cols=252 Identities=12% Similarity=0.084 Sum_probs=161.0
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------C----C----C-cHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-----------------D----M----P-GADVRLVK 141 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-----------------~----~----p-~~a~~v~~ 141 (390)
..+....|+..|+.+||+++|+++++++ .|+++++.+ + . . + ..+.+|..
T Consensus 67 ~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 146 (399)
T cd00832 67 QTDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISI 146 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHH
Confidence 3445678999999999999999876543 356655432 1 0 0 1 24578889
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC---------CCCccch
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL-----------DFH---------EPSETHL 201 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~---------~~~~~~~ 201 (390)
.+|+... .+.+..+|++++.||..|..+|++|. +.+|+.++|.... .+. .|.|.+
T Consensus 147 ~~gl~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~- 221 (399)
T cd00832 147 RHGMRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAA- 221 (399)
T ss_pred HhCCCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCC-
Confidence 9999864 57789999999999999999999999 9999999887321 010 122211
Q ss_pred hhhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 202 DVLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 202 ~~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
..++++|+||+++||++... .. ......++.+.+....+.. ... ....+.++|
T Consensus 222 ---~~G~~~gEGa~~lvLe~~~~-A~~rg~~i~a~i~g~~~~~d~~~----------------~~~-----~~~~~~~a~ 276 (399)
T cd00832 222 ---AAGYVPGEGGAILVLEDAAA-ARERGARVYGEIAGYAATFDPPP----------------GSG-----RPPGLARAI 276 (399)
T ss_pred ---CCCEeeeceEEEEEEeeHHH-HHHCCCeEEEEEEeEEEcCCCCC----------------CCC-----CHHHHHHHH
Confidence 25789999999999998654 11 0011223433322111100 000 134566889
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ ++| |+..|..+... .+.+.+.+|-. +++.+ .+-..+||+.+|+-.+.|...+.. .+++
T Consensus 277 ~~al~~ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~ 351 (399)
T cd00832 277 RLALADAGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDG 351 (399)
T ss_pred HHHHHHcCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCC
Confidence 99999999997 999 99999865433 44556666632 22221 134568999999888887654321 0002
Q ss_pred ccc----------------------CCCCCceEEEEEEcccccceeeee
Q 036844 354 KAT----------------------TGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 354 ~i~----------------------~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
.+. +. ..++++..+||-|..-.+++|
T Consensus 352 ~ipp~~n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 352 VIPPTVNVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CcCCCCCCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 211 11 015678888888877776654
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-10 Score=115.67 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+..+|+.+|++++|+++|+++++||.+++++..+ ...+.++..+.-..|++.... ++.++++|++++.|+..|...|+
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p-~~~V~~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD-AYSVTRACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCc-hhhhhhhhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998765 223456666666679984332 88999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|++|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999973
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-10 Score=111.13 Aligned_cols=253 Identities=15% Similarity=0.102 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHHHcCC--CCCCcCEEEEEecCC-C-------------------------CCC-cHHHHHHHHcCCCC
Q 036844 97 VPKLGKEAALKAIKEWGQ--SVSKITHLIFSAFYG-V-------------------------DMP-GADVRLVKLLGLKP 147 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~--~~~~Id~li~~s~~~-~-------------------------~~p-~~a~~v~~~lgl~~ 147 (390)
...|+..|++++++++|+ +++++..++ +++.+ . .++ ..+.++...+|+..
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 578899999999999996 566666554 44321 1 011 36678888999987
Q ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c-----------------CCCCccchhhhh
Q 036844 148 SVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F-----------------HEPSETHLDVLV 205 (390)
Q Consensus 148 ~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~-----------------~~~~~~~~~~~~ 205 (390)
. .+.+..+|++++.||..|..+|+.|..+.+|+.++|..... | ..|.|.+ .
T Consensus 83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~----r 155 (342)
T PRK14691 83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTA----R 155 (342)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCC----C
Confidence 4 57789999999999999999999999999999999873210 0 0122221 2
Q ss_pred hhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhc
Q 036844 206 VQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS 284 (390)
Q Consensus 206 ~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 284 (390)
.++++||||+++||++...- ........++.+.+....... .. .+. + ......++++++|+
T Consensus 156 ~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~--------------~~-~p~-p--~~~~~~~ai~~AL~ 217 (342)
T PRK14691 156 DGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYH--------------MT-SGA-E--DGDGAYRAMKIALR 217 (342)
T ss_pred CCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCC--------------CC-CCC-C--CHHHHHHHHHHHHH
Confidence 47899999999999875430 011112345554332211000 00 000 0 12334578899999
Q ss_pred cCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH---HHhhhhhccc
Q 036844 285 PIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV---RKKSFEERKA 355 (390)
Q Consensus 285 ~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~---~~~~~~~g~i 355 (390)
++|+++ +|| ++-.|-.+... ...+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+... ++. |.+
T Consensus 218 ~Agl~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~l~~----~~i 290 (342)
T PRK14691 218 QAGITP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLALRD----QIV 290 (342)
T ss_pred HcCCCH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHHHhC----Ccc
Confidence 999997 999 99999876544 34556667632 222222 135679998766644443322 222 221
Q ss_pred cC------------------CC----CCceEEEEEEcccccceeeeeEe
Q 036844 356 TT------------------GE----GLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 356 ~~------------------G~----~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.| +. ..+++|..+||-|..-++++|+.
T Consensus 291 ppt~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 291 PATLNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CCcCCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 11 00 01567889999999999999875
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.8e-10 Score=113.57 Aligned_cols=93 Identities=17% Similarity=0.113 Sum_probs=77.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHH-HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGAD-VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a-~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|+.+|+++||+++|++++|||.+++++... ......+ ..+...||++..+ +..+..+|+++..|+..|+..|
T Consensus 36 ~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I 113 (430)
T PRK06365 36 DFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEI 113 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHH
Confidence 3679999999999999999999999988765443 2222233 3467899998754 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeeccc
Q 036844 174 ENNPGARVLVVCSDIRV 190 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s 190 (390)
++|.++.||++++|+.+
T Consensus 114 ~sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 114 ASGRMDCVAVYGFETMS 130 (430)
T ss_pred HcCCCCEEEEEEeeecc
Confidence 99999999999999764
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.1e-10 Score=113.12 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
.+.+|+..+++++|++ +|+++++||.+++++..+ .. .+..+..+...+|++.... ++.++++|++++.|+..|..+
T Consensus 26 ~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p-~~~V~~~caSG~~Ai~~A~~~ 104 (387)
T PRK08947 26 RAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVP-AVTVNRLCGSSMQALHDAARA 104 (387)
T ss_pred CHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCc-ceeeechhHHHHHHHHHHHHH
Confidence 3789999999999996 799999999999987765 32 3556677888899985332 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|++|..+.||+++.|++|.
T Consensus 105 I~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 105 IMTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HHCCCCCEEEEcccccccc
Confidence 9999999999999999863
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.2e-10 Score=112.78 Aligned_cols=95 Identities=8% Similarity=-0.023 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+.+|++++|++ +|+++++||.|++++... . ..+..+..+....|++.... ++.++.+|++++.|+..|+..
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p-~~tV~~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSA-AVTVNRLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcc-hhhhhhhhHHHHHHHHHHHHH
Confidence 3789999999999996 599999999999997754 2 23446666666778887443 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|++|..+.+|+++.|.+|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999999873
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.28 E-value=4e-10 Score=112.30 Aligned_cols=262 Identities=14% Similarity=0.153 Sum_probs=161.9
Q ss_pred HHhhHHHHHHHHHHHHHHHcCC---CCCCcCEEEEEecCC-C-------------------------CCC-cHHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQ---SVSKITHLIFSAFYG-V-------------------------DMP-GADVRLVKL 142 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~---~~~~Id~li~~s~~~-~-------------------------~~p-~~a~~v~~~ 142 (390)
..+....|+..|+++||+++|+ +++.+..+ ++++.+ . .++ ..+..+...
T Consensus 79 ~~d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 157 (418)
T PRK07910 79 RMSYLQRMSTVLGRRVWENAGSPEVDTNRLMVS-IGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLE 157 (418)
T ss_pred hccHHHHHHHHHHHHHHHHcCCCCCCcccEEEE-EEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHH
Confidence 3345667999999999999996 44455544 444321 1 112 255677888
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c------CC-----CCcc-c-hhhh
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----F------HE-----PSET-H-LDVL 204 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~------~~-----~~~~-~-~~~~ 204 (390)
+|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|..... | .. |... . .+..
T Consensus 158 ~~~~G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~ 234 (418)
T PRK07910 158 RHAKAG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD 234 (418)
T ss_pred hCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC
Confidence 888754 56788999999999999999999999999999999974210 1 11 1100 0 0011
Q ss_pred hhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhh
Q 036844 205 VVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAM 283 (390)
Q Consensus 205 ~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 283 (390)
..++++|||++++||++...- ........++.+.+... ++..+. .+... .....++++++|
T Consensus 235 ~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~--------------dg~~~~-~~~~~---~~~~~~a~~~Al 296 (418)
T PRK07910 235 RDGFVFGEGGALMVIETEEHAKARGANILARIMGASITS--------------DGFHMV-APDPN---GERAGHAMTRAI 296 (418)
T ss_pred CCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEec--------------CCCCCC-CCCCC---HHHHHHHHHHHH
Confidence 258899999999999976430 00001123444332211 111000 01111 123457889999
Q ss_pred ccCCCCCCCce-eEEEcCCCHH-----HHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc-
Q 036844 284 SPIGISDWNSL-FYVLHPGGDG-----LIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT- 356 (390)
Q Consensus 284 ~~~gl~~~~di-~~i~h~~~~~-----~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~- 356 (390)
+++|+++ +|| ++-.|-.+.. -.+.+.+.+|-..-.+. + +-..+||+.+|+-.+.|...+.. .++|.+.
T Consensus 297 ~~agi~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~li~~~l~-l~~~~ipp 371 (418)
T PRK07910 297 ELAGLTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVESILTVLA-LRDGVIPP 371 (418)
T ss_pred HHhCCCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHHHHHHHHH-HhcCccCC
Confidence 9999997 999 9999987653 34566777773211122 2 35679999999877765443221 0002221
Q ss_pred ---------------------CCCCCceEEEEEEcccccceeeeeEe
Q 036844 357 ---------------------TGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 357 ---------------------~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++ ...+++.-+||-|.+-.+++|+.
T Consensus 372 ~~n~~~~~p~~~l~~~~~~~~~~-~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 372 TLNLENLDPEIDLDVVAGEPRPG-NYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCCCCCCCCCCcccCCCCCcCC-CccEEEEeeecCCCeeEEEEEec
Confidence 11 11567888999999989998874
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.5e-10 Score=111.60 Aligned_cols=92 Identities=15% Similarity=0.067 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQS--VSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~--~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+.+|+.+|+++||+++|++ ++|||.+++++............+++.||+.+.+ ......||++...+|..|+..|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999987653322223457899999997655 44466788899999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 036844 175 NNPGARVLVVCSDIRV 190 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s 190 (390)
+|.++.|||+++|+.+
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999854
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.8e-10 Score=108.23 Aligned_cols=229 Identities=16% Similarity=0.092 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+..+|+.+|+++||+++|++++|||.++..+..+.. ....+++.||+...+ ...+..+|+++..++..|...|++
T Consensus 24 ~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~s 98 (388)
T PRK08142 24 SVAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAA 98 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHc
Confidence 478999999999999999999999997652211111 124588999997654 677889999999999999999999
Q ss_pred CCCCeEEEEEeeccccc------------------cCCCCc---------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD------------------FHEPSE--------------------------------------- 198 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~------------------~~~~~~--------------------------------------- 198 (390)
|.++.|||++.|+.+.. |..|..
T Consensus 99 G~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~N 178 (388)
T PRK08142 99 GKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHN 178 (388)
T ss_pred CCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccC
Confidence 99999999999974310 000000
Q ss_pred --------cchh------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecce
Q 036844 199 --------THLD------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMG 258 (390)
Q Consensus 199 --------~~~~------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 258 (390)
.+.+ .....+..+|||+|+||.+.+.-.....+...+.+.+....+.. ..
T Consensus 179 P~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~~~v~I~g~~~~~~~~~-----~~----- 248 (388)
T PRK08142 179 PHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKRPLVKVLGAGEAIKGQM-----GG----- 248 (388)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCCCCEEEEEEEEecCCcc-----cc-----
Confidence 0000 01122455899999999876430000112244444333211110 00
Q ss_pred eEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc-----------------cc
Q 036844 259 IYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD-----------------KL 320 (390)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e-----------------~~ 320 (390)
.++.. ......+++++++++|+++ +|| .+=+|-.-....-...|.||+.+. ++
T Consensus 249 -----~~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 249 -----KVDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred -----Ccccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 01111 1122467889999999997 999 888888766666666788988432 12
Q ss_pred hhHH-HHHhhcCCCccchHHHHHHHHHHh
Q 036844 321 WASR-YVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 321 ~~~~-~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+.+- --+...||...|+-+..+.++.++
T Consensus 320 PvN~sGG~l~~G~p~gatG~~~~~E~~~Q 348 (388)
T PRK08142 320 PFNTDGGGLCNNHPANRGGMTKVIEAVRQ 348 (388)
T ss_pred cccCCChhhcCCCcCcccHHHHHHHHHHH
Confidence 2200 012336898888888888877765
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.8e-09 Score=104.74 Aligned_cols=230 Identities=16% Similarity=0.013 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHHHHHHcC-CCC-CCcCEEEEEecCCCC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWG-QSV-SKITHLIFSAFYGVD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag-~~~-~~Id~li~~s~~~~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
+..+|+.+|+++||+++| +++ +|||.+++++...+. .......+++.||+...+ .+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHH
Confidence 478999999999999999 997 799999875321111 111224566889985443 3333 88999999999999
Q ss_pred HHcCCCCeEEEEEeecccc--c------------cCCCCc----------------------------------------
Q 036844 173 AENNPGARVLVVCSDIRVL--D------------FHEPSE---------------------------------------- 198 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~--~------------~~~~~~---------------------------------------- 198 (390)
+++|.+++|||++.|+.+. . |..|..
T Consensus 99 V~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~N 178 (385)
T PRK06066 99 INSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSN 178 (385)
T ss_pred HHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999986432 0 100000
Q ss_pred --------cchh------------hhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecce
Q 036844 199 --------THLD------------VLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMG 258 (390)
Q Consensus 199 --------~~~~------------~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 258 (390)
.+.+ .....+..+|||+|+||.+++.-.........+...+....... ..+
T Consensus 179 P~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~pv~I~g~g~~~~~~~---~~~------ 249 (385)
T PRK06066 179 PRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDDPVWIKGIGWSTESSN---LET------ 249 (385)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCCCEEEEEEEEecCCcc---ccc------
Confidence 0000 11234566899999999876430100011224444332210000 000
Q ss_pred eEEEeCCcchHHHHHhHHHHHHHhhccCCCC--CCCce-eEEEcCCCHHHHHHHHHHcCCCc--cc--------------
Q 036844 259 IYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS--DWNSL-FYVLHPGGDGLIDQVEKNLGLGK--DK-------------- 319 (390)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~h~~~~~~~~~~~~~lgi~~--e~-------------- 319 (390)
.++. .........+++++++|++ + +|| .+-+|-.-....-...|.||+.+ +.
T Consensus 250 ------~~~~--~~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G~ 320 (385)
T PRK06066 250 ------AELG--KANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQGE 320 (385)
T ss_pred ------cccc--ccHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCCC
Confidence 0000 0112235788999999998 5 888 88888877666667788999876 22
Q ss_pred chhH-HHHHhhcCCCccchHHHHHHHHHHh
Q 036844 320 LWAS-RYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 320 ~~~~-~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
++.+ .--+-.+||...++-+..+.++.++
T Consensus 321 ~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 321 LPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred ccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 1111 0012237999888888777777765
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.9e-09 Score=105.64 Aligned_cols=254 Identities=14% Similarity=0.104 Sum_probs=158.5
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCC-cHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V--------------------------DMP-GADVRL 139 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~--------------------------~~p-~~a~~v 139 (390)
...+....|+..|+++||+++|+++.+.+ .|+++++.+ . .++ ..+.+|
T Consensus 66 ~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 145 (406)
T PRK07967 66 RFMGDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACL 145 (406)
T ss_pred hcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHH
Confidence 33445678999999999999998754332 344444311 0 111 366789
Q ss_pred HHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c-----------------CCCCc
Q 036844 140 VKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-----------------HEPSE 198 (390)
Q Consensus 140 ~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----~-----------------~~~~~ 198 (390)
...+|+... .+.+..+|++++.||..|..+|++|..+.+|+.++|..+.. | ..|.|
T Consensus 146 s~~~~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd 222 (406)
T PRK07967 146 ATPFKIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYD 222 (406)
T ss_pred HHHHCCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCc
Confidence 999999875 57789999999999999999999999999999999874321 1 01222
Q ss_pred cchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHH
Q 036844 199 THLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277 (390)
Q Consensus 199 ~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 277 (390)
.+ ..+++.|+||+++||++.+.- ........++.+.+... ++..+. .+ -.+.+.+
T Consensus 223 ~~----r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~--------------d~~~~~-~p-----~~~~~~~ 278 (406)
T PRK07967 223 AN----RDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATS--------------DGYDMV-AP-----SGEGAVR 278 (406)
T ss_pred CC----CCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECC--------------CCCCCC-CC-----CHHHHHH
Confidence 21 247899999999999975430 11001122444332211 111000 11 1344567
Q ss_pred HHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH---HHh
Q 036844 278 CLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV---RKK 348 (390)
Q Consensus 278 ~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~---~~~ 348 (390)
+|+++|+..+ .|| |+..|-.+... .+.+.+.+|-. .++.+ .+-..+||+.+|+-.+.+... +++
T Consensus 279 a~~~Al~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~lal~~ 351 (406)
T PRK07967 279 CMQMALATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLMMEH 351 (406)
T ss_pred HHHHHHhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHHHhc
Confidence 7888887543 378 99999866543 44566667632 11111 135678999988877665332 222
Q ss_pred hhhhccccC---------CC-------------CCceEEEEEEcccccceeeeeEee
Q 036844 349 SFEERKATT---------GE-------------GLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 349 ~~~~g~i~~---------G~-------------~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
|.+.+ .. ..++++..+||-|..-.+++|+..
T Consensus 352 ----~~iPpt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 352 ----GFIAPSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred ----CcCCCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 22211 00 015688889999999999999753
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-10 Score=114.36 Aligned_cols=95 Identities=13% Similarity=0.051 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|++++|||.||+++.++ ...+..+..++..+|++.... ++.++.+|++++.++..|..+|+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP-AWTVQRNCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce-eeeccchhhHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999987775 334677788999999974322 78999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..++||++++|.+|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998764
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.07 E-value=7.1e-10 Score=103.73 Aligned_cols=95 Identities=19% Similarity=0.138 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+..|++.+|+++++++++||.|++++..+ ...+..+..+.-..|++.... ++.+++.|++++.||..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp-~~~V~~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP-ATTVNRACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE-EEEEE-GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc-eeeehhhhhHHHHHHHHhhhhhc
Confidence 4899999999999999999999999999999888 557778888888899987653 88999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|++|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999985
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-08 Score=117.62 Aligned_cols=221 Identities=12% Similarity=0.103 Sum_probs=141.1
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccC------CCCc
Q 036844 135 ADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFH------EPSE 198 (390)
Q Consensus 135 ~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~------~~~~ 198 (390)
.+.+|...||+... .+.+..+|+|++.||++|.+.|++|.++.+|+.+++.... ... .|.|
T Consensus 185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 57899999999874 6789999999999999999999999999999999876321 000 1222
Q ss_pred cchhhhhhhhhhccCcEEEEeccCCCCCcccccee-EEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHH
Q 036844 199 THLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLF-QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277 (390)
Q Consensus 199 ~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 277 (390)
. ...+++.|+|++++||.+-..-..-.+..+ .|.+.+... +|... +-..+. .....+
T Consensus 262 ~----~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~--------------DG~~~--~itaP~--~~gq~~ 319 (2582)
T TIGR02813 262 I----DSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASS--------------DGKFK--SIYAPR--PEGQAK 319 (2582)
T ss_pred C----CCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcC--------------CCCCC--CCcCCC--HHHHHH
Confidence 2 224889999999999987543000011122 333322211 11100 001111 223457
Q ss_pred HHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCc---ccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 278 CLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGK---DKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 278 ~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+|+++|+++|+++ ++| |+-.|..+... .+.+.+.|+-.. ..+..+ .+-..+||+.+|+-...|...+..
T Consensus 320 ~i~~Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 320 ALKRAYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH
Confidence 8999999999997 999 99999866533 455667776432 122222 134678999999888777654321
Q ss_pred hhhhccccC-------------------------------CCCCceEEEEEEcccccceeeeeEee
Q 036844 349 SFEERKATT-------------------------------GEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 349 ~~~~g~i~~-------------------------------G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
..+|.+.+ ..+..++++-+||-|.+-..++|+-.
T Consensus 398 -l~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 398 -LHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred -HhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 00021110 00114688889999999999999865
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.6e-08 Score=98.28 Aligned_cols=86 Identities=16% Similarity=0.161 Sum_probs=71.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+..+|+.+|+++||+++|++++|||.+++.+. . ..+. ..+++.||+.+.. ....+.++|+++..+|..|...|++
T Consensus 23 ~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~-~~~~v~~gg~sg~~~~~~A~~~I~s 97 (386)
T PRK07855 23 SELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELK-FFSRIHYGGGAACATVQQAAMAVAT 97 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCc-ceeeecCCcHHHHHHHHHHHHHHHC
Confidence 37899999999999999999999999986332 1 2222 5688999997622 1567899999999999999999999
Q ss_pred CCCCeEEEEEe
Q 036844 176 NPGARVLVVCS 186 (390)
Q Consensus 176 g~~~~vLvv~~ 186 (390)
|.++.|||++.
T Consensus 98 G~~d~vLv~g~ 108 (386)
T PRK07855 98 GVADVVVCYRA 108 (386)
T ss_pred CCCCEEEEEee
Confidence 99999999987
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-08 Score=100.29 Aligned_cols=264 Identities=16% Similarity=0.164 Sum_probs=163.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CCCcC---EEEEEecCC-C--------------------------CCC-c
Q 036844 87 DARQAMLIDEVPKLGKEAALKAIKEWGQS-VSKIT---HLIFSAFYG-V--------------------------DMP-G 134 (390)
Q Consensus 87 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~~Id---~li~~s~~~-~--------------------------~~p-~ 134 (390)
..+.+.+.+....|+..|+++|++++|++ ..+.+ .+++++... . .++ .
T Consensus 61 ~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 140 (412)
T COG0304 61 AKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNL 140 (412)
T ss_pred chHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccch
Confidence 44555578889999999999999999997 33343 233333321 1 122 3
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-c--------------cc------c
Q 036844 135 ADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-V--------------LD------F 193 (390)
Q Consensus 135 ~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s--------------~~------~ 193 (390)
.+..++..+|+... .+.+..+|+++.+|+..|..+|+.|..+.+++.++|.. + .. .
T Consensus 141 ~a~~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~a 217 (412)
T COG0304 141 AAGNVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKA 217 (412)
T ss_pred HHHHHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCcccc
Confidence 56788889999864 57789999999999999999999999999999999772 1 11 1
Q ss_pred CCCCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHH
Q 036844 194 HEPSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIG 272 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 272 (390)
..|.|.++ .++++|+||+++||+..+.- ...-+-..++...+... ++++.+. +.--.
T Consensus 218 srPfd~~R----dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~--------------Da~h~t~----P~p~g 275 (412)
T COG0304 218 SRPFDKNR----DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTS--------------DAYHITA----PAPDG 275 (412)
T ss_pred CCCCCCCC----CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecc--------------cccccCC----CCCCC
Confidence 12333222 48999999999999986641 11101123444433221 1111000 00011
Q ss_pred HhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH-
Q 036844 273 KYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV- 345 (390)
Q Consensus 273 ~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~- 345 (390)
....++|+.+|+++|+++ +|| |+-.|-.+...-+ .+.+.++-...+++.+ .+-.-+||+-.|.-.+-+.-.
T Consensus 276 ~Ga~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~ 353 (412)
T COG0304 276 EGAIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISL 353 (412)
T ss_pred chHHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHH
Confidence 234478899999999997 999 9999987654433 4455566332222221 134567888766544332221
Q ss_pred --HHhhhhhccccC-----------------------CCCCceEEEEEEcccccceeeeeEe
Q 036844 346 --RKKSFEERKATT-----------------------GEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 346 --~~~~~~~g~i~~-----------------------G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++. |.+.| .. .+.+|.-+||-|.+-++++++.
T Consensus 354 l~l~~----g~ippt~n~~~~dp~~~~l~~v~~~~~~~~-~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 354 LALRD----GIIPPTINLDNPDPEAADLDVVPNEARTGA-VRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred HHHhc----CCcCCCCCcCCCCcccccccccCCcccccc-eeEEEecccccCCcceEEEEec
Confidence 221 11110 00 1457777888888888888765
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.2e-09 Score=102.69 Aligned_cols=93 Identities=18% Similarity=0.143 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+..+|+.+|++++|+++|++++|||.|++++... +........+++.+|++..+ +..++.+|++++.+|+.|...|.
T Consensus 26 ~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 26 GAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVA 103 (398)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999876543 21122236788899998644 77899999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 036844 175 NNPGARVLVVCSDIRV 190 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s 190 (390)
+|..+.||++++|+++
T Consensus 104 sG~~d~vlv~G~e~~s 119 (398)
T PRK06157 104 SGAYDIALALGVEKLK 119 (398)
T ss_pred CCCCCEEEEEEEeecc
Confidence 9999999999999875
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.4e-08 Score=99.90 Aligned_cols=94 Identities=17% Similarity=0.200 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCC--cCEEEEEecCC-C--CCCcHHHHHHHHcCCC-------CccccceeeccccchHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSK--ITHLIFSAFYG-V--DMPGADVRLVKLLGLK-------PSVNRLMIYNQGCYMGG 163 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~--Id~li~~s~~~-~--~~p~~a~~v~~~lgl~-------~~~~~~~~i~~~C~~~~ 163 (390)
+..+|+.+|++++|+++|++++| ||.|++++... . ..+..+..+...+|++ ..+ ++.++.+|++++
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~ 124 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGG 124 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHH
Confidence 47899999999999999999999 99999987654 2 2345666777565554 443 789999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeecccc
Q 036844 164 TVIRLAKDIAENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 164 ~al~~A~~ll~~g~~~~vLvv~~d~~s~ 191 (390)
.|+..|+..|++|..+.||+++.|++|.
T Consensus 125 ~Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 125 LAVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999999998764
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.2e-07 Score=88.16 Aligned_cols=132 Identities=21% Similarity=0.252 Sum_probs=92.0
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCc-----CEEEEEecCC-C-----------------------CCC-
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKI-----THLIFSAFYG-V-----------------------DMP- 133 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I-----d~li~~s~~~-~-----------------------~~p- 133 (390)
+.+..|.....+....|+..|+.+||+++|+++.++ -.|+++++.. + ..|
T Consensus 74 ~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 153 (254)
T PF00109_consen 74 FGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPN 153 (254)
T ss_dssp TCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTT
T ss_pred ccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCccccc
Confidence 445555555667788999999999999999988533 2345555443 1 022
Q ss_pred cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeec-ccc---------ccCC------CC
Q 036844 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-RVL---------DFHE------PS 197 (390)
Q Consensus 134 ~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~-~s~---------~~~~------~~ 197 (390)
..+.+|+..+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|. .+. .... |.
T Consensus 154 ~~a~~ia~~~gl~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf 230 (254)
T PF00109_consen 154 SAAGRIAILFGLRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPF 230 (254)
T ss_dssp HHHHHHHHHHTB-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGST
T ss_pred ccccchhhhcCCCCc---cccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccc
Confidence 256799999999875 5778999999999999999999999999999999994 321 0111 11
Q ss_pred ccchhhhhhhhhhccCcEEEEeccC
Q 036844 198 ETHLDVLVVQAVFGDGAGAAIIGAG 222 (390)
Q Consensus 198 ~~~~~~~~~~~lfGDgAaA~vl~~~ 222 (390)
+ +. ..++++|+||+++||++.
T Consensus 231 ~--~~--~~G~v~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 231 D--PF--ADGFVLGEGAGALVLERL 251 (254)
T ss_dssp B--TT--B-SB-BB-EEEEEEEEEH
T ss_pred C--CC--CCCEEEECceEEEEEEEh
Confidence 1 11 258999999999999863
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-06 Score=84.39 Aligned_cols=238 Identities=14% Similarity=0.003 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCC-CcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDM-PGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~-p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g 176 (390)
.+|+.+|+++||+++|++++|||.++.++...... ......+...+|+.... .....|+++..+|..|...|++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~----~~~~v~~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPI----NESHVEMDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCC----ceEEecCcHHHHHHHHHHHHhcC
Confidence 79999999999999999999999885432211211 11123455667874321 12223346778999999999999
Q ss_pred CCCeEEEEEeecccc-c------------cCCCCc-------------------cchh----------------------
Q 036844 177 PGARVLVVCSDIRVL-D------------FHEPSE-------------------THLD---------------------- 202 (390)
Q Consensus 177 ~~~~vLvv~~d~~s~-~------------~~~~~~-------------------~~~~---------------------- 202 (390)
.++.|||++.|+.+. . +..|.. .+++
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 999999999997531 0 100100 0000
Q ss_pred ----------------hhhhhhhhccCcEEEEeccCCCCCc-cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCC
Q 036844 203 ----------------VLVVQAVFGDGAGAAIIGAGPDISN-HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSL 265 (390)
Q Consensus 203 ----------------~~~~~~lfGDgAaA~vl~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 265 (390)
.....+..+|||+|+||.+.+. .. .......+.+.+....+.. +. .+
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~-A~~l~~~pv~I~g~~~~~~~~~---~~------------~~ 244 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDR-ARELRERPAWITGIEHRIESPS---LG------------AR 244 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHH-HHHcCCCcEEEEEEEEeeCCcc---cc------------cc
Confidence 0112234589999999987543 11 0011234444333211110 00 01
Q ss_pred cchHHHHHhHHHHHHHhhcc-CCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc-ccchhHHHHHhhcCCCccchHHHHH
Q 036844 266 DVPVAIGKYIGKCLSNAMSP-IGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK-DKLWASRYVLREYGNVGAASVFFIL 342 (390)
Q Consensus 266 ~v~~~~~~~~~~~i~~~L~~-~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~l~L 342 (390)
++.. .. ..+.++++ +|+++ +|| .+=+|-.-....-...|.||+.. .++..+=-.+ . ||-..++-+..+
T Consensus 245 d~~~--~~----~~~~a~~~aAgi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l-~-ghp~gatG~~~~ 315 (352)
T PRK07937 245 DLTR--SP----STALAAEAATGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGAL-A-ANPMFAAGLERI 315 (352)
T ss_pred cccc--HH----HHHHHHHHhcCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccch-h-cCchhHHHHHHH
Confidence 1111 11 12233334 69997 999 88888887777777789999853 2443321123 3 888777777788
Q ss_pred HHHHHhhhhhccccCCCCCceEEEEEEcc
Q 036844 343 DEVRKKSFEERKATTGEGLDCGVLFGCGP 371 (390)
Q Consensus 343 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~ 371 (390)
.++..+ ++.+ +.++.|..+.|.
T Consensus 316 ~e~~~Q------L~g~-~a~~~l~~~~Gg 337 (352)
T PRK07937 316 GEAARH------IWDG-SARRALAHATSG 337 (352)
T ss_pred HHHHHH------Hhcc-CCCEEEEecccc
Confidence 888775 3222 126677777664
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=94.04 Aligned_cols=95 Identities=12% Similarity=-0.016 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+.+|++++|+++|+++++||.+++++..+ ...+..+..+.-..|++.... ++.++++|++++.++..|..+|+
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p-~~~V~~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTP-AYDLQQACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCc-eeeeechhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999997664 222445566555556654332 78899999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999999874
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.2e-06 Score=90.90 Aligned_cols=278 Identities=19% Similarity=0.198 Sum_probs=175.2
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CCCC-------------------cHHHHHHH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-VDMP-------------------GADVRLVK 141 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~~~p-------------------~~a~~v~~ 141 (390)
+..|.....+.--.|..+.+-+||+++|+.++.+. .|+.+.+.. |... -.+.+|..
T Consensus 80 isPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy 159 (1061)
T COG3321 80 ISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISY 159 (1061)
T ss_pred CCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHH
Confidence 34555666666777999999999999999999988 566655554 4221 16789999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----cc-----CCCCcc--chhhhhhhhh
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL-----DF-----HEPSET--HLDVLVVQAV 209 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~-----~~-----~~~~~~--~~~~~~~~~l 209 (390)
.|++... ...+..+|++.+.|+++|.+.|.+|.++.+|+-+....-. .| ..++.. ..+....+++
T Consensus 160 ~l~l~GP---s~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v 236 (1061)
T COG3321 160 VLGLSGP---SVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYV 236 (1061)
T ss_pred HhcCCCC---CccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEE
Confidence 9999864 6789999999999999999999999999999888876421 00 011110 0111234789
Q ss_pred hccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCC
Q 036844 210 FGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS 289 (390)
Q Consensus 210 fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~ 289 (390)
.|.|+++++|.+-..-..-.+..+-++.. +.. ..+|... +-..+. ...-..+++++|+.+|++
T Consensus 237 ~geG~g~vvLKrl~~A~~dgd~IyavI~g-sav------------n~dG~~~--gltaP~--~~aQ~~v~~~al~~a~i~ 299 (1061)
T COG3321 237 RGEGAGVVVLKRLSDAERDGDRIYAVIRG-SAV------------NQDGRSN--GLTAPN--LEAQADVIREALADAGID 299 (1061)
T ss_pred EeeeEEEEEEEEhHHHHhCCCeEEEEEEe-eee------------ccCCCcC--CCCCCC--HHHHHHHHHHHHHhcCCC
Confidence 99999999998754300001123333321 111 1111100 112222 234567899999999999
Q ss_pred CCCce-eEEEcCCCHHH-----HHHHHHHcCCCc-ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccC-----
Q 036844 290 DWNSL-FYVLHPGGDGL-----IDQVEKNLGLGK-DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATT----- 357 (390)
Q Consensus 290 ~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~----- 357 (390)
+ .+| |+=.|..+..+ +..+...++-.. +....--++-...||+.+|.-...|-...-. .+.+.+.+
T Consensus 300 p-~tv~yvEaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~~~ 377 (1061)
T COG3321 300 P-ATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLHFD 377 (1061)
T ss_pred c-ccCcEEEecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCCCC
Confidence 8 999 99889865433 344555554332 2222211245678999888776666544332 00022211
Q ss_pred ------------------------CCCCceEEEEEEcccccceeeeeEeecC
Q 036844 358 ------------------------GEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 358 ------------------------G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
.....+.-+-+||.|.+-.-++++..++
T Consensus 378 ~~np~i~~~~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~~ 429 (1061)
T COG3321 378 TPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAPP 429 (1061)
T ss_pred CCCcCCccccCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecCC
Confidence 1012567888899999988899987654
|
|
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.8e-06 Score=81.11 Aligned_cols=215 Identities=16% Similarity=0.139 Sum_probs=134.0
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCC---CcC----EEEEEec----------------------CCCCCC-----cHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVS---KIT----HLIFSAF----------------------YGVDMP-----GAD 136 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~---~Id----~li~~s~----------------------~~~~~p-----~~a 136 (390)
+.-......|++.|+++||+++++.+. +.| .|.+++. +|+++| -.+
T Consensus 88 ~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~a 167 (440)
T KOG1394|consen 88 ERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAA 167 (440)
T ss_pred hhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhccccc
Confidence 333456788999999999999998665 222 3444443 233444 245
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc--------------c-------cCC
Q 036844 137 VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL--------------D-------FHE 195 (390)
Q Consensus 137 ~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~--------------~-------~~~ 195 (390)
.+|..++|+... -..++.+|+++.+++--|..+|+.|..+..|.-++|.+-. + ...
T Consensus 168 g~vsm~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSR 244 (440)
T KOG1394|consen 168 GYVSMKYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASR 244 (440)
T ss_pred chhhhhhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCC
Confidence 789999999864 4678999999999999999999999998888888887521 0 111
Q ss_pred CCccchhhhhhhhhhccCcEEEEeccCCCCCcc-ccc-eeEEEeeeeeecCCCCCceee-EeecceeEEEeCCcchHHHH
Q 036844 196 PSETHLDVLVVQAVFGDGAGAAIIGAGPDISNH-ERT-LFQVLSCTQTTIPDTENYITG-QLKEMGIYGHLSLDVPVAIG 272 (390)
Q Consensus 196 ~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~-~~~-~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~~~~~v~~~~~ 272 (390)
|-|.++ .++++|+|++.+||+.-+. ... ..+ ..++++.+- +.+..+. ..+++|
T Consensus 245 PfD~~R----dGFVmGEGagvlvlEelEH-A~~RgA~I~AE~lGygl-----s~Da~HiT~P~~dG-------------- 300 (440)
T KOG1394|consen 245 PFDKKR----DGFVMGEGAGVLVLEELEH-AKKRGAPIYAEVLGYGL-----SSDAYHITSPDPDG-------------- 300 (440)
T ss_pred CCccCC----CceeeccceeEEehHhHHH-HHHcCCceeHHhhcCcc-----cccccccCCCCCCc--------------
Confidence 223222 4799999999999987443 110 000 112222110 1111110 011122
Q ss_pred HhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCccc--chhHHHHHhhcCCCccc
Q 036844 273 KYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDK--LWASRYVLREYGNVGAA 336 (390)
Q Consensus 273 ~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~--~~~~~~~~~~~Gn~~sa 336 (390)
.....+|+++|+.+|+++ +|| |+=.|..+... .+++.+.|+-.... +.. +-...||+-.|
T Consensus 301 ~Ga~~am~raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsS---tKgaiGHLLGA 368 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSS---TKGAIGHLLGA 368 (440)
T ss_pred chHHHHHHHHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCccccccc---ccchhhhhccc
Confidence 223467889999999998 999 99888866543 34455555533333 333 24556776543
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.04 E-value=3.4e-05 Score=71.38 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHH-HcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVK-LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~-~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
.+-+|...+.+..+++.+++|+.|.-|+++++..-..-...++++. .-|++..+. ...++-.|++++.|+...+.-|+
T Consensus 60 ~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvp-v~tvNRqCsSGLqaVadiA~~Ir 138 (435)
T KOG1389|consen 60 RPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVP-VRTVNRQCSSGLQAVADIAAKIR 138 (435)
T ss_pred ChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccc-hhhhhhhhhhHHHHHHHHHHHHh
Confidence 3778999999999999999999999999999875222245555554 458887764 77889999999999999999999
Q ss_pred cCCCCeEEEEEeeccccc
Q 036844 175 NNPGARVLVVCSDIRVLD 192 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~~ 192 (390)
+|.++-.|-.+.|.++..
T Consensus 139 ~G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 139 AGFYDIGLAAGVESMTTN 156 (435)
T ss_pred cCceeeecccchhhhccc
Confidence 999999999999998753
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.96 E-value=3.3e-05 Score=76.45 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHc--CCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEW--GQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~a--g~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
..++.....+..+++. ++++.+||.+++++..+ ......+..++..+|++.... .+.++.+|++++.|+..|+..
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p-~~~V~~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVP-AVTVNRACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCC-ceEEeccchhHHHHHHHHHHH
Confidence 5556655566665433 57777899999987776 367788899999999996332 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 036844 173 AENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~ 191 (390)
|++|..+.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999985
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.8e-05 Score=73.41 Aligned_cols=94 Identities=18% Similarity=0.099 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.-|++.+|++++++++|++-||++...+ ......+.+.+---||+.... +..++..|++++.|+.+|++-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~-~tTvNkvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVP-ATTVNKVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCccee-eEeehhhhhhhHHHHHHHHHHHhc
Confidence 889999999999999999999999999998887 666677788887888998775 899999999999999999999999
Q ss_pred CCCCeEEEEEeecccc
Q 036844 176 NPGARVLVVCSDIRVL 191 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~ 191 (390)
|..+.|+..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999983
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.87 E-value=1.8e-05 Score=71.63 Aligned_cols=90 Identities=23% Similarity=0.334 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcC
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENN 176 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g 176 (390)
..||+.+|+.++|+++++.-++|+--+++-..+. .....+..-++|+..-+ .+.++++|+++..||-+|++++++|
T Consensus 29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406|consen 29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence 6799999999999999999999876554433331 11223444578988766 8999999999999999999999999
Q ss_pred CCCeEEEEEeeccc
Q 036844 177 PGARVLVVCSDIRV 190 (390)
Q Consensus 177 ~~~~vLvv~~d~~s 190 (390)
..+.||..+-|+++
T Consensus 105 n~dcvlalgfekm~ 118 (408)
T KOG1406|consen 105 NSDCVLALGFEKME 118 (408)
T ss_pred CcceEEeechhhhC
Confidence 99999999999985
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00069 Score=61.32 Aligned_cols=94 Identities=17% Similarity=0.082 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+..+|..-|++.+|+.+++.++.+|.||++.... ...--++..|.-+.|.+.... +..++.=|.++++++..+++-|
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~p-ALtiNRLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKETP-ALTINRLCGSGFQSIVNGAQEI 105 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCccC-ceeehhhhcccHHHHHhhHHHh
Confidence 3789999999999999999999999999876432 111112244555667776654 8899999999999999999999
Q ss_pred HcCCCCeEEEEEeeccc
Q 036844 174 ENNPGARVLVVCSDIRV 190 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s 190 (390)
.-+..+.||.-+.|.+|
T Consensus 106 ~vgea~ivL~GGtEnMS 122 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMS 122 (396)
T ss_pred hcCcceEEEecCccccc
Confidence 99989999999999987
|
|
| >PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0028 Score=59.47 Aligned_cols=116 Identities=20% Similarity=0.200 Sum_probs=68.1
Q ss_pred CCcchHHHHHhHHHHHHHhhccC---------CCCCCCce-eEEEcCCCHHHHHHHHHHc--------------------
Q 036844 264 SLDVPVAIGKYIGKCLSNAMSPI---------GISDWNSL-FYVLHPGGDGLIDQVEKNL-------------------- 313 (390)
Q Consensus 264 ~~~v~~~~~~~~~~~i~~~L~~~---------gl~~~~di-~~i~h~~~~~~~~~~~~~l-------------------- 313 (390)
|+.......+.+..+.+...++. +.. ++++ ++++|.+-.++.+.-..+|
T Consensus 32 G~~S~~~Yl~ald~~y~~y~~k~~~~~~~~~~~~~-l~~~d~~~fH~Py~klv~Ka~~rl~~~D~~~~~~~~~~~~~~~~ 110 (282)
T PF08540_consen 32 GKLSIQCYLDALDKCYKRYKEKVEKLANRGNKGTS-LDDFDYVCFHSPYCKLVQKAFARLLYNDFLRNPSSEEFEEIDAE 110 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSST---GGG-SEEEE--SSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCC-ccccceEEEecCchHHHHHHHHHHHHhhhhhccccccccccchh
Confidence 34334455566666666666553 556 4888 9999999877765432211
Q ss_pred -----CCCcc----------------------cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEE
Q 036844 314 -----GLGKD----------------------KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVL 366 (390)
Q Consensus 314 -----gi~~e----------------------~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll 366 (390)
+++.+ |+..+-..-++.||+++||+++.|..++.... ...-.| ++|++
T Consensus 111 l~~~~~~~~~~s~~dr~lek~~~~~s~~~~~~kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~ 185 (282)
T PF08540_consen 111 LAPFRDLPLEESYFDRDLEKAFMKASKEDFERKVEPSLLYSRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGM 185 (282)
T ss_dssp HGGGTT--GGGHCTHHHHHHHHHHHHHHHHHHHCHHHTHHHHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEE
T ss_pred hhhhccCCcccccccHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEE
Confidence 01111 11111223467899999999999999994211 333468 99999
Q ss_pred EEEcccccceeeeeEeecC
Q 036844 367 FGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 367 ~~~G~G~~~ga~ll~~~~~ 385 (390)
+++|+|.......+++.+.
T Consensus 186 FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 186 FSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp EEEETTTEEEEEEEEE-TT
T ss_pred EEecCCcceeEEEEEEeCC
Confidence 9999999988888887654
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A .... |
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0012 Score=60.64 Aligned_cols=93 Identities=9% Similarity=0.101 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.+|...+|++..++.+.||.||+++... .-..+++...+-..|++.... +..+.++|-+.-.|+-....+|.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktp-ahtvtmacissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTP-AHTVTMACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCc-cceeeeehhccchhhhccceeEee
Confidence 789999999999999999999999999999876 455667777777778887664 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccc
Q 036844 176 NPGARVLVVCSDIRV 190 (390)
Q Consensus 176 g~~~~vLvv~~d~~s 190 (390)
|.++.++.-+.|.+|
T Consensus 145 g~~dvivaggvelms 159 (465)
T KOG1392|consen 145 GNADVIVAGGVELMS 159 (465)
T ss_pred CCcCEEEEcceeecc
Confidence 999888888888887
|
|
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.023 Score=46.55 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=65.3
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
..+++++|+++|++. +|+ .|=.|-.-....-...+.||++++++..+ --.=.+||..+||=...+.+++.+-.
T Consensus 25 ~~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~-GG~la~GHP~gasG~r~~~~l~~~L~---- 98 (123)
T PF02803_consen 25 VPAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPN-GGALALGHPLGASGARLVVELAHQLR---- 98 (123)
T ss_dssp HHHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCcc-cccccccccccccccchhhhhHHHHH----
Confidence 357889999999996 999 99999988777778889999999988764 12334899988887777777766511
Q ss_pred ccCCCCCceEEEEEEcccccceeeeeE
Q 036844 355 ATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 355 i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
-+.| ++.+....+.|..-.+++++
T Consensus 99 ~~~~---~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 99 RRGG---RYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp HHTT---SEEEEEEEETTTEEEEEEEE
T ss_pred Hhch---hhhhHHhcccceeeEEEEEE
Confidence 1234 66666555555555666665
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.1 Score=47.16 Aligned_cols=114 Identities=18% Similarity=0.076 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C---------------CCCc---------HHHHHHHHcCCCCcccc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V---------------DMPG---------ADVRLVKLLGLKPSVNR 151 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~---------------~~p~---------~a~~v~~~lgl~~~~~~ 151 (390)
...|++.++.+++++. +++|.+||+|..+ . ..|. .+.++.-..|....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~--- 106 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP--- 106 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc---
Confidence 7889999999988653 5788999998865 1 1231 22344444444432
Q ss_pred ceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 152 LMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 152 ~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
...+..+=.++..||.-|..++..| .+.||||+.|-.......... . ......--|.|++|+++..
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~---~---~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFR---P---ERDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcc---c---ccCCCcCEEEEEEecCCCC
Confidence 5567788899999999999999999 899999999997642211110 0 0112234577888887655
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.058 Score=58.73 Aligned_cols=260 Identities=17% Similarity=0.200 Sum_probs=152.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC---C---CCC---------c-HHHHHHHHc----CCCCcccc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG---V---DMP---------G-ADVRLVKLL----GLKPSVNR 151 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~---~---~~p---------~-~a~~v~~~l----gl~~~~~~ 151 (390)
.-..|..+|.-+|+-++|++|.++. .++.+.+.+ . ..| + .-++.++++ .+...
T Consensus 86 Pq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP--- 162 (2376)
T KOG1202|consen 86 PQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP--- 162 (2376)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---
Confidence 4688999999999999999999874 333332222 1 112 1 112333443 33331
Q ss_pred ceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccc-----cccCC-----CCcc--chhhhhhhhhhccCcEEEEe
Q 036844 152 LMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV-----LDFHE-----PSET--HLDVLVVQAVFGDGAGAAII 219 (390)
Q Consensus 152 ~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s-----~~~~~-----~~~~--~~~~~~~~~lfGDgAaA~vl 219 (390)
.+.+..+|++.+.||+.|.+-+++|.++.+||.++...- .+|.. |+-. ..+....++.=+||.+|++|
T Consensus 163 S~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avll 242 (2376)
T KOG1202|consen 163 SFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLL 242 (2376)
T ss_pred chhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEE
Confidence 567788999999999999999999999999998887642 12211 1100 01122335566789999998
Q ss_pred ccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEE
Q 036844 220 GAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVL 298 (390)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~ 298 (390)
.+... .. .....++...+. +++ .++.|..| +. .+.-.+++++..+++|+.| +++ |+=.
T Consensus 243 qrk~~-Ar--RvYAtilnartN----TDG-----fKEqGvTf------P~--G~~Q~qLi~e~Yse~Gl~P-~sv~YvEA 301 (2376)
T KOG1202|consen 243 QRKSL-AR--RVYATILNARTN----TDG-----FKEQGVTF------PS--GDMQEQLIRETYSEAGLNP-ESVVYVEA 301 (2376)
T ss_pred ehhHH-HH--HHHHHhhccccC----CCc-----hhhcCccC------CC--cHHHHHHHHHHHHhcCCCc-ccEEEEEe
Confidence 87654 21 011222221111 111 11222222 21 1222467889999999998 999 8888
Q ss_pred cCCCHHH-----HHHHHHHcCCCc-ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc----------------
Q 036844 299 HPGGDGL-----IDQVEKNLGLGK-DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT---------------- 356 (390)
Q Consensus 299 h~~~~~~-----~~~~~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~---------------- 356 (390)
|..+.++ ...+.+.+=-+. +.+.+. .+-...||.-.||-..+|+..+-. .++|.+.
T Consensus 302 HGtGTkVGDpQEaN~it~~fC~~Rt~pLLIG-SvKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~ 379 (2376)
T KOG1202|consen 302 HGTGTKVGDPQEANGITRFFCATRTTPLLIG-SVKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV 379 (2376)
T ss_pred ccCCCCCCChHHhhhHHHHHhhcCCCceEee-eccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence 8865433 223333321111 111111 134567888888888888776543 2224333
Q ss_pred -------------CCCCCceEEEEEEcccccceeeeeEeec
Q 036844 357 -------------TGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 357 -------------~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+| ..|-+-+||-|.+-.-++|+-.+
T Consensus 380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~~ 417 (2376)
T KOG1202|consen 380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSNT 417 (2376)
T ss_pred cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccCC
Confidence 24 46778889988887888887643
|
|
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.025 Score=43.50 Aligned_cols=75 Identities=24% Similarity=0.180 Sum_probs=44.1
Q ss_pred HHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHHHHcCCCCeEEEE
Q 036844 109 IKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDIAENNPGARVLVV 184 (390)
Q Consensus 109 L~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~ll~~g~~~~vLvv 184 (390)
|+++|++++|||.+++.. ........+.+.+|++.... ...+ +.+|++...+|..+..-=+-.+.+++|++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 689999999999999754 22334466889999987642 1122 34666666666444432122356788888
Q ss_pred Eeec
Q 036844 185 CSDI 188 (390)
Q Consensus 185 ~~d~ 188 (390)
+.-.
T Consensus 76 ~~G~ 79 (90)
T PF08541_consen 76 GFGA 79 (90)
T ss_dssp EEET
T ss_pred EEEh
Confidence 7543
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.12 Score=51.95 Aligned_cols=98 Identities=13% Similarity=0.091 Sum_probs=53.2
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHH-HHHHHH--HHcC--------------CCcccchhHHHHHhhcCCCccch
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDG-LIDQVE--KNLG--------------LGKDKLWASRYVLREYGNVGAAS 337 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~-~~~~~~--~~lg--------------i~~e~~~~~~~~~~~~Gn~~sas 337 (390)
..+++++|+++|+++ +|| .+=+|-.-.. .+-.+. |.+| ++.+++..+ --.-.+||...|+
T Consensus 310 ~~a~~~al~~aGl~~-~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GHP~GAt 387 (426)
T PRK08170 310 VHAATPLLQRHGLTL-EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGHPVGAS 387 (426)
T ss_pred HHHHHHHHHHcCCCH-HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCCCccCc
Confidence 467889999999997 999 8888876432 231111 2222 333444332 1123479998887
Q ss_pred HHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 338 VFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 338 ~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
-...+.++.++-. + . .| .+.+......|..-.+++++.
T Consensus 388 G~~~~~~l~~~l~--~-~-~~---~~g~~~~c~~gg~g~a~~~e~ 425 (426)
T PRK08170 388 GARIVLHLLHALK--R-R-GT---KRGIAAICIGGGQGGAMLLER 425 (426)
T ss_pred cHHHHHHHHHHHH--h-h-CC---CeEEEEEecCCChhheEEEEe
Confidence 7554444444310 1 1 22 344443333444445566654
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=94.18 E-value=0.26 Score=48.67 Aligned_cols=92 Identities=12% Similarity=0.083 Sum_probs=58.2
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHc-----CCCCcccc--ceee-ccccchHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLL-----GLKPSVNR--LMIY-NQGCYMGGTV 165 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~l-----gl~~~~~~--~~~i-~~~C~~~~~a 165 (390)
.+...+...++++++|+++|+.++|||.++... .-+..-..+.++| |++.+-.. .-.+ +.+|++...+
T Consensus 267 ~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~ 342 (378)
T PRK06816 267 NENIVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIM 342 (378)
T ss_pred HHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHH
Confidence 345566778899999999999999999988633 2223335666766 88754311 1122 4477777777
Q ss_pred HHHHHHHHHcCCCCeEEEEEeecc
Q 036844 166 IRLAKDIAENNPGARVLVVCSDIR 189 (390)
Q Consensus 166 l~~A~~ll~~g~~~~vLvv~~d~~ 189 (390)
|..+..-=+-.+.++|++++++..
T Consensus 343 L~~a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 343 LDELLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHHcCCCCCCCEEEEEEeccc
Confidence 765532101124678888876654
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.41 Score=48.23 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=52.6
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc------------------cchhHHHHHhhcCCCccc
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD------------------KLWASRYVLREYGNVGAA 336 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e------------------~~~~~~~~~~~~Gn~~sa 336 (390)
...++++|+++|+++ +|| .+=+|-.-....-...|.||+.+. ++..+ --+-.+||...|
T Consensus 312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA 389 (438)
T PTZ00455 312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA 389 (438)
T ss_pred HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence 467889999999997 999 888888776666677889998762 33321 113447999988
Q ss_pred hHHHHHHHHHHh
Q 036844 337 SVFFILDEVRKK 348 (390)
Q Consensus 337 s~~l~L~~~~~~ 348 (390)
+-...+.+++.+
T Consensus 390 tG~~~v~e~~~Q 401 (438)
T PTZ00455 390 TGVKQIMEVYRQ 401 (438)
T ss_pred HHHHHHHHHHHH
Confidence 877777776654
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=93.29 E-value=0.3 Score=47.51 Aligned_cols=83 Identities=18% Similarity=0.119 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----eee-ccccchHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----MIY-NQGCYMGGTVIRLAKD 171 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~~i-~~~C~~~~~al~~A~~ 171 (390)
....+.++++++|+++|+.++|||.+++... -......+.++||++...... -.+ +.++++...+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~----~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP----NGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC----ChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 3445668899999999999999999887432 222445678999998643211 122 4577787788876655
Q ss_pred HHHcCCCCeEEEEE
Q 036844 172 IAENNPGARVLVVC 185 (390)
Q Consensus 172 ll~~g~~~~vLvv~ 185 (390)
.+ .+.++||+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 33 3456777776
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.27 Score=49.00 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee--------ccccchHHHHHHHHHHHH
Q 036844 102 KEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY--------NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 102 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i--------~~~C~~~~~al~~A~~ll 173 (390)
..|++++|+++|++++|||.+.+.. ..........+.||++... .... -.|++|....+.+.+++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~~~--vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDRDK--VNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCChhh--ccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987543 2223344667788876543 2111 236777777788888887
Q ss_pred HcCCCCeEEE
Q 036844 174 ENNPGARVLV 183 (390)
Q Consensus 174 ~~g~~~~vLv 183 (390)
+.+ .++.|+
T Consensus 392 ~~g-~~~Gl~ 400 (417)
T PRK06025 392 RRG-LKRGLV 400 (417)
T ss_pred HhC-CCeEEE
Confidence 766 555533
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.25 Score=47.32 Aligned_cols=82 Identities=15% Similarity=0.070 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
..+-..++++++|+++|++++|||.+++.. ..+.....+++.||++.... ...+ +.+|++.+.+|.. +
T Consensus 217 ~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~---~ 288 (318)
T TIGR00747 217 AVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDE---L 288 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHH---H
Confidence 345567789999999999999999998633 23335567889999986532 1122 3355555556543 3
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++++ +.+++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3443 4578888774
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=93.05 E-value=0.32 Score=47.03 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-cee--eccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-LMI--YNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-~~~--i~~~C~~~~~al~~A~~l 172 (390)
.......++.+++|+++|++++|||.+++.. ..+..-..+.+.||++....+ .+. -+.++++...+|+.+
T Consensus 236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~--- 308 (338)
T PRK09258 236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA--- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence 4456677889999999999999999888644 233344688899999864321 111 134555555666544
Q ss_pred HHcC---CCCeEEEEEeec
Q 036844 173 AENN---PGARVLVVCSDI 188 (390)
Q Consensus 173 l~~g---~~~~vLvv~~d~ 188 (390)
++.+ +.+++|+++...
T Consensus 309 ~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred HHhCCCCCCCEEEEEEech
Confidence 3333 467888887544
|
|
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=92.51 E-value=0.37 Score=46.38 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-c-eee-ccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-L-MIY-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-~-~~i-~~~C~~~~~al~~A~~ll 173 (390)
..+...++++++|+++|++++|||.+++.. ..+..-..+.++||++..... . -.+ +.++++...+|+.+ +
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~---~ 297 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA---N 297 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH---H
Confidence 456667889999999999999999988732 333455678899999866421 0 111 33445555555433 3
Q ss_pred HcC---CCCeEEEEEe
Q 036844 174 ENN---PGARVLVVCS 186 (390)
Q Consensus 174 ~~g---~~~~vLvv~~ 186 (390)
..+ +.+++|+++.
T Consensus 298 ~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 298 LEQPLREGERLLFAAA 313 (326)
T ss_pred HhCCCCCCCEEEEEEE
Confidence 333 4578888874
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=92.39 E-value=0.32 Score=46.85 Aligned_cols=80 Identities=14% Similarity=0.097 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHHHH
Q 036844 99 KLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~ll~ 174 (390)
....++++++|+++|++++|||.+++... -+.....+.++||++.... ...+ +.+|++...+|..+ ++
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 45677889999999999999999887442 2234467889999986542 1222 33555555555444 44
Q ss_pred cC---CCCeEEEEEe
Q 036844 175 NN---PGARVLVVCS 186 (390)
Q Consensus 175 ~g---~~~~vLvv~~ 186 (390)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 43 4578888773
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=92.37 E-value=0.6 Score=44.94 Aligned_cols=84 Identities=14% Similarity=0.052 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc--ceee-ccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR--LMIY-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~--~~~i-~~~C~~~~~al~~A~~l 172 (390)
.......++++++|+++|++++|||.+++..... .....++++||++..... .-.+ +.+|++...+|. .+
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~---~~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALF---EA 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHH---HH
Confidence 4556677889999999999999999988644222 234688899999865321 0111 224444444544 34
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.+ +.+++|+++.
T Consensus 300 ~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 300 IKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4544 4578887763
|
|
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=92.20 E-value=0.94 Score=45.49 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=55.3
Q ss_pred HHHHHhhccCCCCCCCce-eEEEcCCCHHH-HHHH--HHHcCC--------------CcccchhHHHHHhhcCCCccchH
Q 036844 277 KCLSNAMSPIGISDWNSL-FYVLHPGGDGL-IDQV--EKNLGL--------------GKDKLWASRYVLREYGNVGAASV 338 (390)
Q Consensus 277 ~~i~~~L~~~gl~~~~di-~~i~h~~~~~~-~~~~--~~~lgi--------------~~e~~~~~~~~~~~~Gn~~sas~ 338 (390)
..++++++++|+++ +|| .+=+|-.-... +-.+ .|.||+ +..++..+ --.-.+||...|+-
T Consensus 313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~-GG~la~GhP~gATG 390 (427)
T PRK09268 313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVN-GSSLAAGHPFAATG 390 (427)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCC-cCHHhcCCCcccch
Confidence 57889999999997 999 88777764333 2121 243433 21222221 01233789998887
Q ss_pred HHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 339 FFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 339 ~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
...+.++.++-. + +.| .+.|....+.|..-.+++|+
T Consensus 391 ~~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 391 GRIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred HHHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence 777777776511 1 233 56565555555544556665
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=91.81 E-value=0.62 Score=45.07 Aligned_cols=82 Identities=18% Similarity=0.148 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccce-ee-ccccchHHHHHHHHHHHHHc
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLM-IY-NQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~-~i-~~~C~~~~~al~~A~~ll~~ 175 (390)
.....++++++|+++|++++|||.++.... -+..-..++++||++....... .+ +.++++...+|. .++++
T Consensus 236 ~~~~~~~i~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~ 308 (339)
T PRK06840 236 IPNFLKVIREALRKSGYTPKDIDYLAILHM----KRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQ 308 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCc----CHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHc
Confidence 345678999999999999999999876442 2333457889999986431111 11 334445555554 33444
Q ss_pred C---CCCeEEEEEe
Q 036844 176 N---PGARVLVVCS 186 (390)
Q Consensus 176 g---~~~~vLvv~~ 186 (390)
+ +.+++|+++.
T Consensus 309 ~~~~~Gd~ill~~~ 322 (339)
T PRK06840 309 GKLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4678888874
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=91.66 E-value=0.21 Score=40.63 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=47.2
Q ss_pred HHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCc--ccchhHHHHHhhcCCCccchHHHHHH
Q 036844 272 GKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGK--DKLWASRYVLREYGNVGAASVFFILD 343 (390)
Q Consensus 272 ~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~l~L~ 343 (390)
...+.++|+++|+++|+++ +|| ++..|-.+....+.. .+.++-.. ..+..+ .+-..+||+.+++-++.|.
T Consensus 24 ~~~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~ 101 (119)
T PF02801_consen 24 GAALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLA 101 (119)
T ss_dssp HHHHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHH
Confidence 3456788999999999997 999 999999887765543 44454322 123322 2467899999999999988
Q ss_pred HHHHh
Q 036844 344 EVRKK 348 (390)
Q Consensus 344 ~~~~~ 348 (390)
..+..
T Consensus 102 ~~~l~ 106 (119)
T PF02801_consen 102 KALLA 106 (119)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76653
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.88 Score=43.63 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc--eee-ccccchHHHHHHHHHHHHH
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL--MIY-NQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~--~~i-~~~C~~~~~al~~A~~ll~ 174 (390)
.+...++++++|+++|++++|||.+++.. ..+.....+.++||++...... -.+ +.+|++...+|. .+++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~~ 296 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LALE 296 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHHH
Confidence 34566789999999999999999998754 2333456888999998643211 111 234555555554 4455
Q ss_pred cC---CCCeEEEEEe
Q 036844 175 NN---PGARVLVVCS 186 (390)
Q Consensus 175 ~g---~~~~vLvv~~ 186 (390)
.+ +.+++|+++.
T Consensus 297 ~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 297 QGKIKPGDTLLLYGF 311 (325)
T ss_pred cCCCCCCCEEEEEEE
Confidence 54 3578888774
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=91.24 E-value=1.3 Score=44.01 Aligned_cols=71 Identities=20% Similarity=0.099 Sum_probs=50.2
Q ss_pred HHHHHHhhccCCCC--CCCce-eEEEcCCCHHHHHHHHHHcCCCcc------------------cchhHHHHHhhcCCCc
Q 036844 276 GKCLSNAMSPIGIS--DWNSL-FYVLHPGGDGLIDQVEKNLGLGKD------------------KLWASRYVLREYGNVG 334 (390)
Q Consensus 276 ~~~i~~~L~~~gl~--~~~di-~~i~h~~~~~~~~~~~~~lgi~~e------------------~~~~~~~~~~~~Gn~~ 334 (390)
....+++++++|++ + +|| .+=+|-.-....-...|.||+.+. ++..+ --.-.+||..
T Consensus 269 ~~aa~~a~~~AGl~~~~-~Did~~Ei~D~Fs~~~l~~~e~lGl~~~Ge~~~~~~~g~~~~~G~~pvN~~-GG~la~Ghp~ 346 (398)
T PRK06157 269 RIAARKAYREAGITDPR-EELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLDGFFDADGGLPCQID-GGLKCFGHPI 346 (398)
T ss_pred HHHHHHHHHHcCCCCch-hcCCEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCC-CCcccCCCcc
Confidence 35778899999998 5 889 888888766666677789998762 22221 0122479999
Q ss_pred cchHHHHHHHHHHh
Q 036844 335 AASVFFILDEVRKK 348 (390)
Q Consensus 335 sas~~l~L~~~~~~ 348 (390)
.|+-...+.+++++
T Consensus 347 gatG~~~~~e~~~Q 360 (398)
T PRK06157 347 GASGLRMLYEMYLQ 360 (398)
T ss_pred cHhHHHHHHHHHHH
Confidence 88877777777764
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=90.97 E-value=0.58 Score=46.16 Aligned_cols=82 Identities=13% Similarity=0.090 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-ce-ee-ccccchHHHHHHHHHHHHH
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-LM-IY-NQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-~~-~i-~~~C~~~~~al~~A~~ll~ 174 (390)
.....++++++|+++|++++|||.++.... -+..-..++++||++..... .+ .+ +.++++...+|..+ ++
T Consensus 279 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~---~~ 351 (379)
T PLN02326 279 VRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA---VR 351 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---HH
Confidence 455667899999999999999998886442 22334568899999865321 11 11 33555555666444 44
Q ss_pred cC---CCCeEEEEEe
Q 036844 175 NN---PGARVLVVCS 186 (390)
Q Consensus 175 ~g---~~~~vLvv~~ 186 (390)
.+ +.+++|+++.
T Consensus 352 ~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 352 SGKVKKGDVIATAGF 366 (379)
T ss_pred cCCCCCCCEEEEEEE
Confidence 43 4577888773
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=90.61 E-value=0.99 Score=43.08 Aligned_cols=82 Identities=17% Similarity=0.114 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
..+...++++++|+++|+.++|||.+++... .+..-..+.+.||++.... ...+ +.++++.+.+|. .+
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~---~~ 292 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQA----NLRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALD---EA 292 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHH---HH
Confidence 4566778899999999999999998887542 3334467889999986532 1112 224444444443 33
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4688888875
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.84 Score=44.86 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHH-cCCCCcccc----ceee-ccccchHHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKL-LGLKPSVNR----LMIY-NQGCYMGGTVIRL 168 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~-lgl~~~~~~----~~~i-~~~C~~~~~al~~ 168 (390)
+...+...++++++|+++|++++|||.+++...... ....+.++ ||+.....+ .-.+ +.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 455666779999999999999999999886432221 22234455 565321111 1122 5577788888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 036844 169 AKDIAENNPGARVLVVCS 186 (390)
Q Consensus 169 A~~ll~~g~~~~vLvv~~ 186 (390)
+..-+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64433 34578887774
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=89.50 E-value=1.5 Score=41.86 Aligned_cols=82 Identities=17% Similarity=0.091 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccccee---e-ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMI---Y-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~---i-~~~C~~~~~al~~A~~l 172 (390)
..+...++++++|+++|++++|||.++... ..+..-..+.+.||++.... ... + +.+|++.+..|. .+
T Consensus 217 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 217 AVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HH
Confidence 344567789999999999999999998643 23334467889999987542 111 1 234455555543 44
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.+ +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 4578888774
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=88.63 E-value=2.1 Score=41.01 Aligned_cols=79 Identities=16% Similarity=-0.074 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcH-HHHHHHHcCCCCcc--ccceee-ccccchHHHHHHHHHHHH
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGA-DVRLVKLLGLKPSV--NRLMIY-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~-a~~v~~~lgl~~~~--~~~~~i-~~~C~~~~~al~~A~~ll 173 (390)
.+...++++++|+++|+.++|||.++............ ........+..... .....+ +.++++.+..|..+...+
T Consensus 204 ~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~ 283 (332)
T cd00825 204 AEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLML 283 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHH
Confidence 34556899999999999999999888755443222222 22222333321000 001122 456677777777776666
Q ss_pred HcC
Q 036844 174 ENN 176 (390)
Q Consensus 174 ~~g 176 (390)
+.+
T Consensus 284 ~~~ 286 (332)
T cd00825 284 EHG 286 (332)
T ss_pred hcC
Confidence 654
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=88.09 E-value=1.2 Score=43.51 Aligned_cols=90 Identities=19% Similarity=0.139 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEec-CCCCCCcHHHHHHHHcCCCC--ccc--c-ceeeccccchHHHHHHHHHHH
Q 036844 99 KLGKEAALKAIKEWGQSVSKITHLIFSAF-YGVDMPGADVRLVKLLGLKP--SVN--R-LMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~-~~~~~p~~a~~v~~~lgl~~--~~~--~-~~~i~~~C~~~~~al~~A~~l 172 (390)
+=..++.+++|+++|++++|||.|+...+ +++.....+..+.+.+|-.. .+. . ...-+.+.+++...+..+...
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 34568999999999999999998764322 22322222333344444211 100 0 111123344444444455555
Q ss_pred HHcC--CCCeEEEEEeec
Q 036844 173 AENN--PGARVLVVCSDI 188 (390)
Q Consensus 173 l~~g--~~~~vLvv~~d~ 188 (390)
++.| +..++||.+++-
T Consensus 314 ~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 314 SRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HHcCcCCCCcEEEEecCC
Confidence 6666 457899888543
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=88.07 E-value=1.5 Score=42.72 Aligned_cols=81 Identities=22% Similarity=0.179 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----eee-ccccchHHHHHHHHHHHH
Q 036844 99 KLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----MIY-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~~i-~~~C~~~~~al~~A~~ll 173 (390)
+...++++++|+++|++++|||.+++.. .-+..-..++++||++..-... -.+ +.++++...+|..+..
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 4677889999999999999999988743 2223446778899998654210 122 3456666666655543
Q ss_pred HcCCCCeEEEEE
Q 036844 174 ENNPGARVLVVC 185 (390)
Q Consensus 174 ~~g~~~~vLvv~ 185 (390)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 223456777666
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=87.48 E-value=2.7 Score=39.64 Aligned_cols=82 Identities=10% Similarity=0.158 Sum_probs=54.9
Q ss_pred HHhHHHHHHHhhccCCCCCCCce-eEEEcC----CCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHH--HH
Q 036844 272 GKYIGKCLSNAMSPIGISDWNSL-FYVLHP----GGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFIL--DE 344 (390)
Q Consensus 272 ~~~~~~~i~~~L~~~gl~~~~di-~~i~h~----~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L--~~ 344 (390)
-..+..+++++|+++|+++ +|| .+|.+- +.+.+...+.+++|+..+-...+ .+=+|.+.-++++ ++
T Consensus 84 e~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~n------LsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYN------LSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeec------ccCCcchhhHHHHHHHH
Confidence 3456678999999999998 998 655433 45678889999999988755442 4455554445554 43
Q ss_pred HHHhhhhhccccCCCCCceEEEEEE
Q 036844 345 VRKKSFEERKATTGEGLDCGVLFGC 369 (390)
Q Consensus 345 ~~~~~~~~g~i~~G~~~d~vll~~~ 369 (390)
-+-+ ..|+ .++|+++.
T Consensus 157 ~lL~------~~p~---~~ALVVst 172 (290)
T PF08392_consen 157 DLLQ------AHPN---SYALVVST 172 (290)
T ss_pred HHHH------hCCC---cEEEEEEE
Confidence 3332 3456 67777664
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=87.32 E-value=1.9 Score=39.29 Aligned_cols=89 Identities=16% Similarity=0.145 Sum_probs=53.0
Q ss_pred HHHHHhHHHHHHHhhccCCCCCCCce-eEEEcC----CCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHH
Q 036844 269 VAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHP----GGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILD 343 (390)
Q Consensus 269 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~----~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~ 343 (390)
+.+.+...++++++|++.|+++ +|| ++|.-. ..+.+--.+.+.||++++--.. -.+.+|++.-.-.|.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence 3455666678889999999997 999 776422 2345556899999998763332 145555555555554
Q ss_pred HHHHhhhhhccccCCCCCceEEEEEEcc
Q 036844 344 EVRKKSFEERKATTGEGLDCGVLFGCGP 371 (390)
Q Consensus 344 ~~~~~~~~~g~i~~G~~~d~vll~~~G~ 371 (390)
.+.+- -+-.|| .+||++..-.
T Consensus 171 ~A~~~----~~~~p~---a~VLvv~vEl 191 (226)
T PF00195_consen 171 RAKDI----ARANPG---ARVLVVCVEL 191 (226)
T ss_dssp HHHHH----HHHSTT----EEEEEEEEE
T ss_pred HHHHH----HhCCcc---ceEEEEEEEe
Confidence 44332 113577 8999988653
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=86.83 E-value=3.2 Score=37.94 Aligned_cols=89 Identities=16% Similarity=-0.009 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHH-HHHHHHcCCC---Ccccccee-eccccchHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGAD-VRLVKLLGLK---PSVNRLMI-YNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a-~~v~~~lgl~---~~~~~~~~-i~~~C~~~~~al~~A~~ 171 (390)
..+...++++++|+++|++++|||.++............. .......+.. .... ... -+.++++++..|..+..
T Consensus 143 ~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~as~~~~l~~~~~ 221 (254)
T cd00327 143 SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSAT-LIMTGHPLGAAGLAILDELLL 221 (254)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceecc-ccccccchHHHHHHHHHHHHH
Confidence 3456678899999999999999999876443332211111 1111122221 0100 112 24466666666666655
Q ss_pred HHHcC-------CCCeEEEEEe
Q 036844 172 IAENN-------PGARVLVVCS 186 (390)
Q Consensus 172 ll~~g-------~~~~vLvv~~ 186 (390)
.++.+ +.+++|+.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~~~ 243 (254)
T cd00327 222 MLEHEFIPPTPREPRTVLLLGF 243 (254)
T ss_pred HHhCCCcCCCCCCcCEEEEeeE
Confidence 55554 4566665553
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=86.28 E-value=3.2 Score=33.97 Aligned_cols=78 Identities=21% Similarity=0.231 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+=+.- .+....-...+.||++....- ++.--.||+|....+++++++-.
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~~ 99 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDPEKVNPNGGALALGHPLGASGARLVVELAHQLRR 99 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGGGGBSTT--HHHH-BHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccccccCcccccccccccccccccchhhhhHHHHHH
Confidence 35789999999999999999886533 233344566778888764310 11122367777777788888766
Q ss_pred cCCCCeEEE
Q 036844 175 NNPGARVLV 183 (390)
Q Consensus 175 ~g~~~~vLv 183 (390)
.+ .++.|+
T Consensus 100 ~~-~~~gla 107 (123)
T PF02803_consen 100 RG-GRYGLA 107 (123)
T ss_dssp HT-TSEEEE
T ss_pred hc-hhhhhH
Confidence 54 455444
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.14 E-value=0.84 Score=43.17 Aligned_cols=70 Identities=14% Similarity=0.223 Sum_probs=51.7
Q ss_pred HHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCC---CccchHHHHHHHHHHh
Q 036844 277 KCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGN---VGAASVFFILDEVRKK 348 (390)
Q Consensus 277 ~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn---~~sas~~l~L~~~~~~ 348 (390)
.++..+|+++||+. +|+ +|=++-+-....-...+.||++++++... --.=..|| |+.|-++..|.+.+++
T Consensus 298 laipk~lk~aG~~~-sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv~-GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 298 LAIPKALKKAGLEQ-SDVDYWEINEAFSVVVLANIKKLGLDPSKVNVH-GGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred HHHHHHHHHcCcch-hhhhHHhhhhhhhHHHHHHHHHhCCCHhhccCC-CceeecCCCcCCcchhHHHHHHHHHHh
Confidence 35678999999996 999 88666665566667788999999998652 00123566 5677788888888876
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=85.02 E-value=2.4 Score=40.75 Aligned_cols=53 Identities=11% Similarity=0.062 Sum_probs=41.2
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcc
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSV 149 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~ 149 (390)
..+.+..+..++++++|++++++++|||.++..- .-...-..+.++||++...
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k 269 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEK 269 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHH
Confidence 3356888999999999999999999999887522 2233446788999997654
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.63 E-value=3.1 Score=40.76 Aligned_cols=79 Identities=15% Similarity=-0.029 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHH
Q 036844 100 LGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLM------IYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 100 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~------~i~~~C~~~~~al~~A~~ll 173 (390)
-...|++++|+++|++++|||.+...- ......-...+.||+...+.... .--.|++|......+..++-
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~ 334 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK 334 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHH
Confidence 456799999999999999999986533 23334455667888865431011 22347777777777777776
Q ss_pred HcCCCCeEEE
Q 036844 174 ENNPGARVLV 183 (390)
Q Consensus 174 ~~g~~~~vLv 183 (390)
+.+ .++.++
T Consensus 335 ~~~-~~~g~~ 343 (361)
T PRK06690 335 RED-MKYGIA 343 (361)
T ss_pred HhC-CCEEEE
Confidence 544 445443
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=84.18 E-value=4.9 Score=39.88 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC
Q 036844 102 KEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLK 146 (390)
Q Consensus 102 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~ 146 (390)
..|++++|+++|++++|||.+-... ..+...-...+.||+.
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~ 334 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWD 334 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCC
Confidence 5899999999999999999887522 2233334556778875
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=82.55 E-value=5.4 Score=40.37 Aligned_cols=98 Identities=18% Similarity=0.126 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+=..- .+....-...+.||+...+.. ...--.|++|....+.++.+|-+
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999884321 222222334467887543210 11222366666667777777765
Q ss_pred cCC-CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 175 NNP-GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 175 ~g~-~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
.+. .++.|+.. +.-|--+.|+||++.+.
T Consensus 409 ~~~~~~~gl~~~----------------------c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 409 RGKDCRFGVVSM----------------------CIGTGMGAAAVFERGDS 437 (452)
T ss_pred cCCCCCeeEEEE----------------------ccccCceeEEEEEecCc
Confidence 442 14444332 23355577888888765
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=81.52 E-value=5 Score=39.14 Aligned_cols=84 Identities=20% Similarity=0.091 Sum_probs=55.6
Q ss_pred hHHHHHHHHHHHHHHHc--CCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-----ceee-ccccchHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEW--GQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-----LMIY-NQGCYMGGTVIR 167 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~a--g~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-----~~~i-~~~C~~~~~al~ 167 (390)
...+...++++++|+++ |++++|||.+++-... ...-..++++||++..... .-.. +.++++...+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~~----~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPGG----RAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCCC----hHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 44566777899999999 9999999988874422 2334568899999865310 1122 446666666665
Q ss_pred HHHHHHHcC---CCCeEEEEEe
Q 036844 168 LAKDIAENN---PGARVLVVCS 186 (390)
Q Consensus 168 ~A~~ll~~g---~~~~vLvv~~ 186 (390)
.+. +.+ +.+++|+++.
T Consensus 332 ~~~---~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YME---AKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHH---HhCCCCCCCEEEEEEE
Confidence 543 333 4678888774
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=81.37 E-value=4.2 Score=40.37 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc--c----eeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR--L----MIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~--~----~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||++-... ..+...-...+.||+...+.. - +..-.|++|....+.++.+|-.
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~ 369 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR 369 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999886522 233334456678888643210 0 1112244455555566666544
Q ss_pred cCCCCeEEE
Q 036844 175 NNPGARVLV 183 (390)
Q Consensus 175 ~g~~~~vLv 183 (390)
.+ .++.|+
T Consensus 370 ~~-~~~g~~ 377 (394)
T PRK09051 370 IG-GRYALV 377 (394)
T ss_pred cC-CCEEEE
Confidence 32 344443
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=81.31 E-value=8 Score=37.83 Aligned_cols=93 Identities=23% Similarity=0.192 Sum_probs=63.0
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCC-----Cccccce--eec
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLK-----PSVNRLM--IYN 156 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~-----~~~~~~~--~i~ 156 (390)
|..+.|.. .+....-...|++..+++.|+.++|.|.++|.. +.|-....++..|+.+ +... +. .-+
T Consensus 196 p~~dg~~s--~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~-~~~~vGN 268 (377)
T COG3425 196 PYVDGRFS--EPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLV-YPQRIGN 268 (377)
T ss_pred cccCceec--HHHHHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccch-hhhhcCc
Confidence 44455544 456778888999999999999999999999855 4455567777777776 2221 12 224
Q ss_pred cccchHHHHHHHHHHHHHcC-CCCeEEEEE
Q 036844 157 QGCYMGGTVIRLAKDIAENN-PGARVLVVC 185 (390)
Q Consensus 157 ~~C~~~~~al~~A~~ll~~g-~~~~vLvv~ 185 (390)
..|++.+.+| |..|=.+. +.+++|+++
T Consensus 269 ~YtgS~~L~L--as~L~~a~~~G~rIl~~S 296 (377)
T COG3425 269 TYTGSLLLGL--ASLLDNAKLPGDRILLFS 296 (377)
T ss_pred ccchhHHHHH--HHHHhhcCCCCCEEEEEe
Confidence 5777777665 34444444 567888776
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=81.07 E-value=5.3 Score=39.77 Aligned_cols=77 Identities=14% Similarity=0.146 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHHc
Q 036844 102 KEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 102 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
..|++++|+++|++++|||.+-+.- ......-...+.||+...+.. ++..-.|++|....+.++.+|-+.
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~ 378 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR 378 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc
Confidence 4699999999999999999887522 233333456678887643210 111223556666666666666544
Q ss_pred CCCCeEEE
Q 036844 176 NPGARVLV 183 (390)
Q Consensus 176 g~~~~vLv 183 (390)
+ .++.|+
T Consensus 379 ~-~~~g~~ 385 (402)
T PRK08242 379 G-KRTALI 385 (402)
T ss_pred C-CCeEEE
Confidence 3 455544
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=80.74 E-value=6.2 Score=40.50 Aligned_cols=81 Identities=22% Similarity=0.211 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeecc--------ccchHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQ--------GCYMGGTVIRLAKDI 172 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~--------~C~~~~~al~~A~~l 172 (390)
...|+++|++.+|++++|||.+=+.+| +|...-...+.||+...-.+-..++. +.+.+++.+.-+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydc----F~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSC----FPSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccC----CHHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 346999999999999999999877664 34333455678888754100111221 223345555445555
Q ss_pred HHcCCCCeEEEEE
Q 036844 173 AENNPGARVLVVC 185 (390)
Q Consensus 173 l~~g~~~~vLvv~ 185 (390)
|+....++.|+.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5544566666654
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.42 E-value=4.1 Score=40.51 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHH
Q 036844 100 LGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 100 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll 173 (390)
-...|+++||+++|++++|||.+-..- ......-...+.||+...+.. ++..-.|++|....+..+.+|-
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~ 373 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLR 373 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHH
Confidence 446899999999999999999886321 222333445577887543210 1111225566666666666665
Q ss_pred HcCCCCeEE
Q 036844 174 ENNPGARVL 182 (390)
Q Consensus 174 ~~g~~~~vL 182 (390)
..+ .++.|
T Consensus 374 ~~~-~~~g~ 381 (399)
T PRK09052 374 RTN-LKYGM 381 (399)
T ss_pred hcC-CCeEE
Confidence 543 34443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 390 | ||||
| 3tsy_A | 979 | 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr | 1e-132 | ||
| 1qlv_A | 402 | Pyrone Synthase (Pys) From Gerbera Hybrida Length = | 1e-130 | ||
| 3a5s_A | 387 | Benzalacetone Synthase (I207lL208F) Length = 387 | 1e-130 | ||
| 3a5q_A | 387 | Benzalacetone Synthase From Rheum Palmatum Length = | 1e-130 | ||
| 1cgz_A | 389 | Chalcone Synthase From Alfalfa Complexed With Resve | 1e-129 | ||
| 1cml_A | 389 | Chalcone Synthase From Alfalfa Complexed With Malon | 1e-128 | ||
| 1chw_A | 389 | Chalcone Synthase From Alfalfa Complexed With Hexan | 1e-128 | ||
| 1bi5_A | 389 | Chalcone Synthase From Alfalfa Length = 389 | 1e-128 | ||
| 1bq6_A | 388 | Chalcone Synthase From Alfalfa With Coenzyme A Leng | 1e-128 | ||
| 1i86_A | 389 | Chalcone Synthase, G256a Mutant Length = 389 | 1e-128 | ||
| 1d6i_A | 388 | Chalcone Synthase (H303q Mutant) Length = 388 | 1e-127 | ||
| 1d6h_A | 387 | Chalone Synthase (N336a Mutant Complexed With Coa) | 1e-127 | ||
| 1jwx_A | 389 | Chalcone Synthase--F215s Mutant Length = 389 | 1e-127 | ||
| 1i89_A | 389 | Chalcone Synthase (G256l) Length = 389 | 1e-127 | ||
| 1i88_A | 389 | Chalcone Synthase (G256v) Length = 389 | 1e-127 | ||
| 1i8b_A | 389 | Chalcone Synthase (g256f) Length = 389 | 1e-127 | ||
| 1u0v_A | 393 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-126 | ||
| 1z1e_A | 390 | Crystal Structure Of Stilbene Synthase From Arachis | 1e-122 | ||
| 1u0u_A | 397 | An Aldol Switch Discovered In Stilbene Synthases Me | 1e-118 | ||
| 1xes_A | 413 | Crystal Structure Of Stilbene Synthase From Pinus S | 1e-118 | ||
| 3awj_A | 402 | Crystal Structure Of The Huperzia Serrata Polyketid | 1e-112 | ||
| 3ov3_A | 393 | G211f Mutant Of Curcumin Synthase 1 From Curcuma Lo | 1e-112 | ||
| 3ov2_A | 393 | Curcumin Synthase 1 From Curcuma Longa Length = 393 | 1e-111 | ||
| 2p0u_A | 413 | Crystal Structure Of Marchantia Polymorpha Stilbene | 1e-105 | ||
| 2d51_A | 406 | Pentaketide Chromone Synthase (M207g Mutant) Length | 1e-103 | ||
| 2d3m_A | 406 | Pentaketide Chromone Synthase Complexed With Coenzy | 1e-103 | ||
| 3oit_A | 387 | Crystal Structure Of Curcuminoid Synthase Cus From | 3e-85 | ||
| 3ale_A | 416 | A Type Iii Polyketide Synthase That Produces Diaryl | 3e-85 | ||
| 2h84_A | 374 | Crystal Structure Of The C-terminal Type Iii Polyke | 6e-33 | ||
| 1tee_A | 393 | Crystal Structure Of C205f Mutant Of Pks18 From Myc | 7e-22 | ||
| 1ted_A | 393 | Crystal Structure Of A Type Iii Polyketide Synthase | 1e-21 | ||
| 3e1h_A | 465 | Crystal Structure Of A Type Iii Polyketide Synthase | 1e-15 | ||
| 3euq_A | 379 | X-Ray Structural Of A Type Iii Pentaketide Synthase | 1e-15 | ||
| 1u0m_A | 382 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 1e-14 | ||
| 3euo_A | 379 | Crystal Structure Of A Fungal Type Iii Polyketide S | 1e-14 | ||
| 3v7i_A | 413 | Germicidin Synthase (Gcs) From Streptomyces Coelico | 2e-07 |
| >pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 | Back alignment and structure |
|
| >pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida Length = 402 | Back alignment and structure |
|
| >pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F) Length = 387 | Back alignment and structure |
|
| >pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum Length = 387 | Back alignment and structure |
|
| >pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol Length = 389 | Back alignment and structure |
|
| >pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa Length = 389 | Back alignment and structure |
|
| >pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa Length = 389 | Back alignment and structure |
|
| >pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A Length = 388 | Back alignment and structure |
|
| >pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant Length = 389 | Back alignment and structure |
|
| >pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant) Length = 388 | Back alignment and structure |
|
| >pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa) Length = 387 | Back alignment and structure |
|
| >pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant Length = 389 | Back alignment and structure |
|
| >pdb|1I89|A Chain A, Chalcone Synthase (G256l) Length = 389 | Back alignment and structure |
|
| >pdb|1I88|A Chain A, Chalcone Synthase (G256v) Length = 389 | Back alignment and structure |
|
| >pdb|1I8B|A Chain A, Chalcone Synthase (g256f) Length = 389 | Back alignment and structure |
|
| >pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Of Specificity Of Type Iii Polyketide Synthases: 18xchs Structure Length = 393 | Back alignment and structure |
|
| >pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis Hypogaea Length = 390 | Back alignment and structure |
|
| >pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates Cyclization Specificity Of Type Iii Polyketide Synthases: Pine Stilbene Synthase Structure Length = 397 | Back alignment and structure |
|
| >pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus Sylvestris Length = 413 | Back alignment and structure |
|
| >pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide Synthase 1 Complexed With Coa-Sh Length = 402 | Back alignment and structure |
|
| >pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa Length = 393 | Back alignment and structure |
|
| >pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha Stilbenecarboxylate Synthase 2 (Stcs2) Length = 413 | Back alignment and structure |
|
| >pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant) Length = 406 | Back alignment and structure |
|
| >pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A Length = 406 | Back alignment and structure |
|
| >pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza Sativa Length = 387 | Back alignment and structure |
|
| >pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces Diarylheptanoid Length = 416 | Back alignment and structure |
|
| >pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks Hybrid From Dictyostelium) Length = 374 | Back alignment and structure |
|
| >pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18 From Mycobacterium Tuberculosis Length = 393 | Back alignment and structure |
|
| >pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pksiiinc From Neurospora Crassa Length = 465 | Back alignment and structure |
|
| >pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From Neurospora Crassa Length = 379 | Back alignment and structure |
|
| >pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Synthase (Thns) From Streptomyces Coelicolor A3(2): A Bacterial Type Iii Polyketide Synthase (Pks) Provides Insights Into Enzymatic Control Of Reactive Polyketide Intermediates Length = 382 | Back alignment and structure |
|
| >pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide Synthase, Oras Length = 379 | Back alignment and structure |
|
| >pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A Type Iii Polyketide Synthase Length = 413 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 | Back alignment and structure |
|---|
Score = 659 bits (1701), Expect = 0.0
Identities = 231/377 (61%), Positives = 288/377 (76%), Gaps = 1/377 (0%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
ATILA+GTATP +C YQ+DY D+YF+ T SEH T LK+KF RIC++ I KRY HLTEE+
Sbjct: 604 ATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEM 663
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L+E+PN+ Y APSL+ RQ ++ EVPKLGKEAALKA+KEWGQ SKITHL+F GV+
Sbjct: 664 LEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVE 723
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MPGAD +L LLGL+PSV R+M+Y+QGCY GGTV+R AKD+AENN GARVLVVCS+I V+
Sbjct: 724 MPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVV 783
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
F PSE LD LV QA+FGDG+ A I+G+ PDIS ER LFQ++S QT IP++ I
Sbjct: 784 TFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISI-ERPLFQLVSAAQTFIPNSAGAIA 842
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
G L+E+G+ HL +VP I + + KCL+ A P+GISDWNSLF++ HPGG ++D VE
Sbjct: 843 GNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAVEA 902
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L L K KL A+R+VL EYGN+ +A V FILDE+RKKS + +ATTGEGLD GVLFG GP
Sbjct: 903 KLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGP 962
Query: 372 GLTVETVVLQSFPIDST 388
GLT+ETVVL S P+ +
Sbjct: 963 GLTIETVVLHSIPMVTN 979
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Length = 393 | Back alignment and structure |
|---|
Score = 455 bits (1173), Expect = e-160
Identities = 193/390 (49%), Positives = 272/390 (69%), Gaps = 6/390 (1%)
Query: 1 MTTVKS---NQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRIC 55
M + + QR ATI+A+GTATPPN + Q+ +PDFYFR TNS+ K ELK+KF+R+C
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 56 ERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQS 115
E+ + KRY HLTEEILKE P +C Y S D RQ ++++E+P+L KEAA KAIKEWG+
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 116 VSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175
S+ITHL+F + G+DMPGAD RL LLGL +VNRLMIY+Q C+MG ++R+AKD+AEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 176 NPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQV 235
N GARVLVV +I VL F P+E + L QA FGDGAGA ++GA P E+ ++++
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPL-EGIEKPIYEI 239
Query: 236 LSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLF 295
+ Q T+ +++ + G L+ G + +P I +G+ L A++P+G+ +WN +F
Sbjct: 240 AAAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVF 299
Query: 296 YVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKA 355
+V HPG +ID +E L L DKL +R+V EYGN+ +A+V+F++DE+RK+S E ++
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 356 TTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385
TTG+GL GVL G GPGL++ETVVL+S P+
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Length = 387 | Back alignment and structure |
|---|
Score = 447 bits (1151), Expect = e-157
Identities = 175/387 (45%), Positives = 245/387 (63%), Gaps = 10/387 (2%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
++ +QR A +LA+GTA PPNC Q + PDFYFR TNS+H T LK+KFKRIC+ +
Sbjct: 1 MRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQ 60
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
+RY H TEE+L +P +APSLDAR + D VP+L EAA KAI EWG+ + ITH
Sbjct: 61 RRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITH 120
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+ + G +PG D RLV LLGL+PSV R M++ GC+ G +RLAKD+AEN+ GARV
Sbjct: 121 LVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARV 180
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVV +++ ++ F P E L+VQ +FGDGA A I+GA D + ER LF+++S QT
Sbjct: 181 LVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD--DVERPLFEIVSAAQT 238
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI----GISDWNSLFYV 297
IP++++ + + E + G L VP IG + +CL + P+ G WN LF+
Sbjct: 239 IIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWA 298
Query: 298 LHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATT 357
+HPG ++DQV+ LGL KL ASR VL +YGN+ A+V F LDE+R++ + A
Sbjct: 299 VHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQR--KEAAAA 356
Query: 358 GEGLDCGVLFGCGPGLTVETVVLQSFP 384
GE + GV+ GPG+TV+ ++L +
Sbjct: 357 GEWPELGVMMAFGPGMTVDAMLLHATS 383
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Length = 393 | Back alignment and structure |
|---|
Score = 436 bits (1123), Expect = e-153
Identities = 87/373 (23%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
A I + T TP Q+D D +E+ R+ ++ I R + +
Sbjct: 33 AVIEGLATGTPRRVVNQSDAADR---VAELFLDPGQRERIPRVYQKSRITTRRMAV--DP 87
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
L ++ ++ R + + L + + +A+ ++I L+ + G
Sbjct: 88 LDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFI 147
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
PG DV +VK LGL PS++R+++ GC + A + +P + LVVC ++ +
Sbjct: 148 APGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSV 207
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
+ ++ +V+ ++FGDG A +IGA E V S + +TE+ I
Sbjct: 208 NA--VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIV 265
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
+ GI LS ++P I + ++ + G+ + + +HPGG +I+Q +
Sbjct: 266 LGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVR 325
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
+LG+ + S VL +GN+ + S+ F+L+ + ++A + + + GV F GP
Sbjct: 326 SLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV------QQAESAKAISTGVAFAFGP 379
Query: 372 GLTVETVVLQSFP 384
G+TVE ++
Sbjct: 380 GVTVEGMLFDIIR 392
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Length = 387 | Back alignment and structure |
|---|
Score = 436 bits (1122), Expect = e-153
Identities = 226/379 (59%), Positives = 282/379 (74%), Gaps = 1/379 (0%)
Query: 9 RPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLT 68
+ AT++A+GTA PPNC+YQAD+PDFYFR TNS+H LK+KFKR+CE I KRY H+T
Sbjct: 10 KKLATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVT 69
Query: 69 EEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFY 128
EEILKENPN+ Y A SL+ R M + V +LGKEAALKAIKEWGQ SKITHLI
Sbjct: 70 EEILKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLA 129
Query: 129 GVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
GVDMPGAD +L KLL L PSV R M Y+ GCY GGTV+RLAKDIAENN GARVL+VCS++
Sbjct: 130 GVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEM 189
Query: 189 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTEN 248
F PSETHLD ++ QA+ GDGA A I+GA PD++ ER +F+++S QT +P++
Sbjct: 190 TTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLT-VERPIFELVSTAQTIVPESHG 248
Query: 249 YITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQ 308
I G L E G+ HL VP I I CLS+A +P+ ISDWNSLF++ HPGG ++DQ
Sbjct: 249 AIEGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQ 308
Query: 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFG 368
V +GL K+KL +R VL++YGN+ +A+VFFI+DE+RKKS E +ATTGEGL+ GVLFG
Sbjct: 309 VTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFG 368
Query: 369 CGPGLTVETVVLQSFPIDS 387
GPG+TVETVVL+S P+ S
Sbjct: 369 FGPGITVETVVLRSVPVIS 387
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Length = 413 | Back alignment and structure |
|---|
Score = 430 bits (1108), Expect = e-150
Identities = 215/385 (55%), Positives = 273/385 (70%), Gaps = 4/385 (1%)
Query: 4 VKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
+ QR A+ILA+GTA PPN Q+ YPDFYFR T +EH TELK+KFKRICER I
Sbjct: 29 FRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIK 88
Query: 62 KRYFHLTEEILKENPNMCCY-NAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT 120
+RY +LTEEILK+NP++C + PSLDARQAML EVP+L KEAA KAI+EWGQS S IT
Sbjct: 89 QRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT 148
Query: 121 HLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGAR 180
HLIF + D+PGAD + KLLGL PSV R+ ++ GC+ GGTV+R+AKD+AENN GAR
Sbjct: 149 HLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGAR 208
Query: 181 VLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ 240
VLV+CS+ + F PSETHLD LV QA+FGDGA A I+GA P E+ F+++ Q
Sbjct: 209 VLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPI-PQVEKACFEIVWTAQ 267
Query: 241 TTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHP 300
T +P++E I G+++E+G+ L VP I I C+ A S ISDWN LF+V+HP
Sbjct: 268 TVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHP 327
Query: 301 GGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEG 360
GG ++D+VE L L KL +R+V+ EYGN+ +A V FILD+ RK S + +TTGEG
Sbjct: 328 GGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEG 387
Query: 361 LDCGVLFGCGPGLTVETVVLQSFPI 385
L+ GVLFG GPGLT+ETVVL+S PI
Sbjct: 388 LEMGVLFGFGPGLTIETVVLKSVPI 412
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Length = 382 | Back alignment and structure |
|---|
Score = 421 bits (1085), Expect = e-147
Identities = 81/370 (21%), Positives = 137/370 (37%), Gaps = 26/370 (7%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT+ + P + + + R + R+ E + R+ E
Sbjct: 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRHIVQPIED 66
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
E+P + R + E +A+ + + I +I+ + G
Sbjct: 67 TLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM 118
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MP L+ +G + ++ I GC GG I A D P A L+V + L
Sbjct: 119 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 178
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYIT 251
+ P++ + L+ +FGDG AA++ T ++ IP TE++I
Sbjct: 179 CYQ-PTDLGVGSLLCNGLFGDGIAAAVVRGRGG------TGVRLERNGSYLIPKTEDWIM 231
Query: 252 GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEK 311
+K G + L VP + + L G + FY++H GG ++D +
Sbjct: 232 YDVKATGFHFLLDKRVPATMEP-LAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLST 290
Query: 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGP 371
L + SR L EYGN+ +A V L + +E G G+L G GP
Sbjct: 291 FLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF----DEGGVEEG---ARGLLAGFGP 343
Query: 372 GLTVETVVLQ 381
G+T E +
Sbjct: 344 GITAEMSLGC 353
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Length = 374 | Back alignment and structure |
|---|
Score = 406 bits (1044), Expect = e-141
Identities = 100/379 (26%), Positives = 169/379 (44%), Gaps = 22/379 (5%)
Query: 9 RPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLT 68
+ +L +G + P Q D K E EK KRI E+ I R HL
Sbjct: 11 NNNSFVLGIGISVPGEPISQQSLKDSISNDF--SDKAETNEKVKRIFEQSQIKTR--HLV 66
Query: 69 EEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFY 128
+ K ++ + ++ VP L ++A L+A+K+WG ITH++
Sbjct: 67 RDYTKPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTST 126
Query: 129 GVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI 188
G+ +P + +L+ LLGL V R+ + GC G + +R A +A+ +P R+LVVC+++
Sbjct: 127 GIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEV 186
Query: 189 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTEN 248
L F D +V ++F DG+ A IIG P E L++V+ + P+TEN
Sbjct: 187 CSLHFSNTD--GGDQMVASSIFADGSAAYIIGCNP--RIEETPLYEVMCSINRSFPNTEN 242
Query: 249 YITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNS-----LFYVLHPGGD 303
+ L++ G L +P+ IG I + + + + +++H GG
Sbjct: 243 AMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHTGGK 302
Query: 304 GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDC 363
++ +E +LG+ + + V YGN+ +ASV F++D RK
Sbjct: 303 SILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKS---------KSLPTY 353
Query: 364 GVLFGCGPGLTVETVVLQS 382
+ GPGL E L++
Sbjct: 354 SISLAFGPGLAFEGCFLKN 372
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Length = 465 | Back alignment and structure |
|---|
Score = 378 bits (971), Expect = e-129
Identities = 84/394 (21%), Positives = 160/394 (40%), Gaps = 21/394 (5%)
Query: 1 MTTVKSNQRPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPI 60
M +I +G PP + ++ +K I I
Sbjct: 21 MAASTVAGELGLSITGLGVQYPPYSLGPDAIDIL---SKRYHPESPAMKKVLAINRYTGI 77
Query: 61 NKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT 120
++R + +P + N P++ + + + L EA+ KA+ E ++IT
Sbjct: 78 DQRSSIGNPD----HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQIT 133
Query: 121 HLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA----ENN 176
H++ + PG D + K LGL + +++++ GC G +R A ++
Sbjct: 134 HMVSTTCTDSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARG 193
Query: 177 PGARVLVVCSDIRVLDFHEPSET---HLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLF 233
AR+LV+ ++ E+ + + A+F D A A I+ G + + ++
Sbjct: 194 KPARILVLALEVSTTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIY 253
Query: 234 QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS------PIG 287
+L IPD+E+ + + MG LS VPV + ++ +S P
Sbjct: 254 DLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSS 313
Query: 288 ISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347
+ +HPGG ++ E +GL + + AS +GN +A++F +L+ +R+
Sbjct: 314 YQKPADFDWAMHPGGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLRE 373
Query: 348 KSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
K + A G+ + V GPG+ VE +L+
Sbjct: 374 KD-MDALAPGGKVKEYVVGCAFGPGINVEMCMLK 406
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Length = 413 | Back alignment and structure |
|---|
Score = 365 bits (938), Expect = e-124
Identities = 78/402 (19%), Positives = 137/402 (34%), Gaps = 47/402 (11%)
Query: 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEE 70
AA + A + + + R + + I I R + L E
Sbjct: 26 AAYLCAPAVIHGEHSVETREIVEE-VRGRHPHAP--WAPRIDGIAASTGIESRGWMLPLE 82
Query: 71 ILKENPNMCCYN----------------------------APSLDARQAMLIDEVPKLGK 102
+ ++ R A + V G+
Sbjct: 83 AAVAPGGGGDLGAAREALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGE 142
Query: 103 EAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMG 162
AA A++ G V+ + LI S +PG DV L L L+ L C G
Sbjct: 143 RAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQWACVAG 202
Query: 163 GTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAG 222
+ LA D+ +P VLVV S+ + P++ L+ L+V+ +F D A AA++
Sbjct: 203 TRSLALAADLVAADPDRVVLVVISEALSTTYQ-PADDTLESLIVRLLFADTAVAAVVTGR 261
Query: 223 PDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSN- 281
P ++ ++ + T+P T + + + G + + P A+ + +
Sbjct: 262 PR----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWL 317
Query: 282 -AMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLG-KDKLWASRYVLREYGNVGAASVF 339
S W+ + HPGG +++ +E+ + L + GN G A+VF
Sbjct: 318 RVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVF 377
Query: 340 FILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
IL + VL+ PGLT + +
Sbjct: 378 DILRRAHDAGQKTG--------SRAVLYAAAPGLTATALEGE 411
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Length = 357 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 3e-12
Identities = 51/313 (16%), Positives = 96/313 (30%), Gaps = 57/313 (18%)
Query: 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFY--GVDMPGADVRLVKLLGLKPS----VN 150
P++ AA A+ + ++ ++ S+ + G+D+ A + + +
Sbjct: 54 PPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVPAFGLA 113
Query: 151 RLMIYNQGC--YMGGTVIRLAKDIAENNPGAR---VLVVCSDI--RVLDFHEPSETHLDV 203
Q C MG I LA + GA +L +D + +
Sbjct: 114 ------QRCNGGMGA--IELAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNSVDVTM-- 163
Query: 204 LVVQAVFGDGAGAAIIGAGPD----ISNHERT------LFQVLSCTQTTIPDTENYITGQ 253
+GDGA A ++ +S L + +
Sbjct: 164 ------YGDGAAALVLSTRDGFARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLG 217
Query: 254 LKEMGIYGHLSL-DVPVAIGKYIGKCLSNAMSPIGIS----DWNSLFYVLHPGGDGLIDQ 308
+ + L D+ + + A+ G + V+ G +
Sbjct: 218 TRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAGTAIEDIAH----AVIPVSRRGTGHE 273
Query: 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFG 368
+ LGL ++ + R G+VGA + L + E G D +LFG
Sbjct: 274 LHDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLV----ENALVQPG---DRVLLFG 324
Query: 369 CGPGLTVETVVLQ 381
G G T V++
Sbjct: 325 GGAGYTCTAAVVE 337
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Length = 396 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 4e-12
Identities = 62/298 (20%), Positives = 95/298 (31%), Gaps = 60/298 (20%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIF---SAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN 156
+G AA I + KI +I SA A V++ LLG++P R
Sbjct: 54 MGANAAKDIITDED--KKKIGMVIVATESAVDAA--KAAAVQIHNLLGIQPFA-RCFEMK 108
Query: 157 QGCYMGGTV-IRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAG 215
+ CY T I+LAKD P +VLV+ +D + E G GA
Sbjct: 109 EACY-AATPAIQLAKDYLATRPNEKVLVIATDTARYGLNSGGE---------PTQGAGAV 158
Query: 216 AAIIGAGPDISNHERTLFQVLSCTQTTI------PDTENYITGQLKEMGIYGHLSLDVPV 269
A +I P I + T P Y G LS D +
Sbjct: 159 AMVIAHNPSIL-----ALNEDAVAYTEDVYDFWRPTGHKYPLVD-------GALSKDAYI 206
Query: 270 AIGKYIGKCLSNAMSPIG--ISDWNSLFYVLHPGGDGLIDQVEKNLGLGKD--------- 318
+ + + G ++D+ H + + +++ D
Sbjct: 207 ---RSFQQSWNEYAKRQGKSLADFA--SLCFHVPFTKMGKKALESIIDNADETTQERLRS 261
Query: 319 KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVE 376
+ R GN+ S++ L + E R GE + LF G G E
Sbjct: 262 GYEDAVDYNRYVGNIYTGSLYLSLISL----LENRDLQAGETI---GLFSYGSGSVGE 312
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Length = 388 | Back alignment and structure |
|---|
Score = 58.4 bits (141), Expect = 1e-09
Identities = 45/266 (16%), Positives = 81/266 (30%), Gaps = 51/266 (19%)
Query: 100 LGKEAALKAIKEWGQSVSKITHLIF---SAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN 156
AA + + I +I S+ A V L +L+G++P R
Sbjct: 59 FAANAAEAILTKED--KEAIDMVIVGTESSIDES--KAAAVVLHRLMGIQPFA-RSFEIK 113
Query: 157 QGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGA 216
+ Y ++LAK+ +P +VLVV +DI + E G GA A
Sbjct: 114 EAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGLNSGGE---------PTQGAGAVA 164
Query: 217 AIIGAGPDISNHERTLFQVLSCTQTT------IPDTENYITGQLKEMGIYGHLSLDVPVA 270
++ + P I + + T P Y G LS + +
Sbjct: 165 MLVSSEPRIL-----ALKEDNVMLTQDIYDFWRPTGHPYPMVD-------GPLSNETYI- 211
Query: 271 IGKYIGKCLSNAMSPIGI--SDWNSLFYVLHPGGDGLIDQVEKNLGLG---------KDK 319
+ + G+ +D++ H + + +
Sbjct: 212 --QSFAQVWDEHKKRTGLDFADYD--ALAFHIPYTKMGKKALLAKISDQTEAEQERILAR 267
Query: 320 LWASRYVLREYGNVGAASVFFILDEV 345
S R GN+ S++ L +
Sbjct: 268 YEESIIYSRRVGNLYTGSLYLGLISL 293
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Length = 345 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 6e-08
Identities = 33/181 (18%), Positives = 59/181 (32%), Gaps = 33/181 (18%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLDVLVVQ------AV-FGDGAGAAIIGA---GPDISN 227
LVV + V + T DV + A+ G GA A ++ PD
Sbjct: 151 YALVVDGETANLVYEKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPDAPR 210
Query: 228 HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIG 287
++ + + + + + + + I K K A +G
Sbjct: 211 YKGGVTRSATEWNKLCRGNLDRMVTDTRL--LLIE-------GI-KLAQKTFVAAKQVLG 260
Query: 288 IS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILD 343
+ D +V+H K+ G+ K+ E+GN+G ASV +L
Sbjct: 261 WAVEELDQ----FVIHQVSRPHTAAFVKSFGIDPAKVMTI---FGEHGNIGPASVPIVLS 313
Query: 344 E 344
+
Sbjct: 314 K 314
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Length = 392 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 9e-06
Identities = 72/417 (17%), Positives = 131/417 (31%), Gaps = 98/417 (23%)
Query: 12 ATILAVGTATPPN-------CFYQADYPDFYFRATNSEHKTELKEKFKR-----ICERQP 59
A I A G TPP+ Y + A + + E + I +
Sbjct: 25 AVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASG 84
Query: 60 INKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKI 119
I RY + K P + R + + ++ AA +AI+ WG+ +I
Sbjct: 85 IKSRYV-----VAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERI 139
Query: 120 THLIFSAFYGVDM--PGADVRLVKLLGLKP-----SVNRLMIYNQGCYMGGTV--IRLAK 170
++ + P + + LGL +V C ++ A
Sbjct: 140 GAVLCACSNM-QRAYPAMAIEVQNALGLGGFAFDMNV--------AC--SSATFGLKTAA 188
Query: 171 DIAENNPGARVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD---- 224
D VL+V +I L+F + +H + FGD A AAI+ D
Sbjct: 189 DFVGGGSVDAVLMVNPEICSGHLNFRDRD-SH--FI-----FGDVATAAIVERADDAQGG 240
Query: 225 ---ISNHERTLFQ---------VLSCTQTTIPDTENYIT--GQ--LKEMGIYGHLSLDVP 268
+ +T F + + G+ KE+ VP
Sbjct: 241 WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEV---------VP 291
Query: 269 VAIGKYIGKCL-SNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNL---GLGKDKLWASR 324
+ + + I + + P G+ LH + + + + + +D+
Sbjct: 292 L-VSEMIIEHAREIGIDPHGL-KR----MWLHQANINMNEIIGRKVLGRDPTRDENVI-- 343
Query: 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
+L +Y N +A + + G D G++ G G + TV +Q
Sbjct: 344 -ILDDYANTSSAGSIIAFHK------HQDDMAQG---DLGLICSFGAGYSAGTVFVQ 390
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Length = 335 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 1e-05
Identities = 42/217 (19%), Positives = 70/217 (32%), Gaps = 57/217 (26%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---IS---- 226
+LVV ++ +D + D + F DGA A ++G P
Sbjct: 143 TMLVVGTEKLSPTIDMY-------DRGNCFI-----FADGAAAVVVGETPFQGIGPTVAG 190
Query: 227 ---NHERTLFQ--VLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSN 281
+ Q ++ + ++ A K +G
Sbjct: 191 SDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPA--VFRW-------AAFK-MGDVGRR 240
Query: 282 AMSPIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAAS 337
AM G+ D +V H + + + KNL L D + A+ + GN AAS
Sbjct: 241 AMDAAGVRPDQIDV----FVPHQANSRINELLVKNLQLRPDAVVAN--DIEHTGNTSAAS 294
Query: 338 VFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLT 374
+ + E+ A G D +L G G GL+
Sbjct: 295 IPLAMAELL----TTGAAKPG---DLALLIGYGAGLS 324
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 3e-05
Identities = 60/392 (15%), Positives = 116/392 (29%), Gaps = 126/392 (32%)
Query: 28 QADYPDFYFRATNSEHKTELKEKFKRICERQP--INKRYFHLTEEILKENPNMCCYNAPS 85
+ +Y F L K RQP + + Y + + +N YN
Sbjct: 88 RINYK---F----------LMSPIKTEQ-RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR 133
Query: 86 LDA----RQAML-IDEVPKL--------GKEA-ALKAIKE------------W---GQ-- 114
L RQA+L + + GK AL W
Sbjct: 134 LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 115 SVSKITHLIFSAFYGVDMPG----------------ADVRLVKLLGLKPSVNRLMIYNQG 158
S + ++ Y +D L +LL KP N L++
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN- 252
Query: 159 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF-HEPSETHLDVLVVQAVFGDGAGAA 217
++ AK N ++L+ +V DF + TH+ + +
Sbjct: 253 -------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKS 305
Query: 218 IIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277
+ L + L C +P +E+ + + P + I +
Sbjct: 306 L-------------LLKYLDCRPQDLP----------REV-LTTN-----PRRLS-IIAE 335
Query: 278 CLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRY----VLRE---- 329
+ + G++ W+ H D L +E +L + + + + V
Sbjct: 336 SIRD-----GLATWD---NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 330 --------YGNVGAASVFFILDEVRKKSFEER 353
+ +V + V +++++ K S E+
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEK 419
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Length = 317 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 4e-05
Identities = 44/187 (23%), Positives = 72/187 (38%), Gaps = 47/187 (25%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---ISNHER 230
LVV SD+ R D D ++ FGDGAGAA++ A + IS H
Sbjct: 133 YALVVGSDVLARTCDPT-------DRGTIII-----FGDGAGAAVLAASEEPGIISTHLH 180
Query: 231 ---TLFQVLSC--TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSP 285
+ ++L+ P+ ++T E ++ A+ + + + ++
Sbjct: 181 ADGSYGELLTLPNADRVNPENSIHLTMAGNE--VFKV-------AVTE-LAHIVDETLAA 230
Query: 286 IGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFI 341
+ DW V H +I K LG+ D + + L +GN AASV
Sbjct: 231 NNLDRSQLDW----LVPHQANLRIISATAKKLGMSMDNVVVT---LDRHGNTSAASVPCA 283
Query: 342 LDEVRKK 348
LDE +
Sbjct: 284 LDEAVRD 290
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Length = 333 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 48/184 (26%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---ISNHER 230
LV+ ++ R+LDF D VL FGDGAGA I+ A + +++
Sbjct: 148 TALVIGAETFSRILDFK-------DRTTCVL-----FGDGAGAVILQASDEPGVLASALH 195
Query: 231 T------LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS 284
+ + ++ + ++ A+ + K A+
Sbjct: 196 ADGSHSNILCTPGNVNGGVVSGSAFLHMDGQA--VFKL-------AVNV-LEKVAVEALE 245
Query: 285 PIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFF 340
+S DW + H ++ + LGL ++++ + + E+GN AAS+
Sbjct: 246 KANLSAEQIDW----LIPHQANIRIMQSTCRKLGLPQERMIVT---VGEHGNTSAASIPL 298
Query: 341 ILDE 344
LD
Sbjct: 299 ALDV 302
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Length = 321 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 50/189 (26%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---ISNHER 230
LV+ + ++LD+ D VL FGDGA +I A ++ +
Sbjct: 134 TGLVIGGETFSKMLDWT-------DRSTAVL-----FGDGAAGVLIEAAETPHFLNEKLQ 181
Query: 231 T---LFQVLSC--------TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279
+ L+ + + + I+ AI + + +
Sbjct: 182 ADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRS--IFDF-------AIKD-VSQNI 231
Query: 280 SNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVF 339
+ ++ + D+ +LH +ID++ + + ++K + + +YGN AAS+
Sbjct: 232 LSLVTDETV-DY----LLLHQANVRIIDKIARKTKISREKFLTN---MDKYGNTSAASIP 283
Query: 340 FILDEVRKK 348
+LDE +
Sbjct: 284 ILLDEAVEN 292
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Length = 323 | Back alignment and structure |
|---|
Score = 41.3 bits (98), Expect = 3e-04
Identities = 44/182 (24%), Positives = 63/182 (34%), Gaps = 46/182 (25%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---ISNHER 230
+ LV+ SD+ R LD D VL FGDGAGA I+ A IS H
Sbjct: 140 KALVIGSDLNSRKLDET-------DRSTVVL-----FGDGAGAVILEASEQEGIISTHLH 187
Query: 231 T---LFQVLSC-TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI 286
L + YI Q E + A+ + + + +
Sbjct: 188 ASADKNNALVLAQPERGIEKSGYIEMQGNE--TFKL-------AVRE-LSNVVEETLLAN 237
Query: 287 GIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFIL 342
+ DW V H +I K L + ++ + L +Y N AA+V L
Sbjct: 238 NLDKKDLDW----LVPHQANLRIITATAKKLEMDMSQVVVT---LDKYANNSAATVPVAL 290
Query: 343 DE 344
DE
Sbjct: 291 DE 292
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Length = 339 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 40/217 (18%), Positives = 67/217 (30%), Gaps = 57/217 (26%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---IS---- 226
VLVV ++ V+D D L FGDGAGAA++G
Sbjct: 142 HVLVVATERMTDVIDLA-------DRSLSFL-----FGDGAGAAVVGPSDVPGIGPVVRG 189
Query: 227 ---NHERTLFQ--VLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSN 281
+L + K ++ A+ +
Sbjct: 190 IDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKR--VFRW-------AVAD-VVPAARE 239
Query: 282 AMSPIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAAS 337
A+ G++ +V H +ID + LG+ + + + + GN +AS
Sbjct: 240 ALEVAGLTVGDLVA----FVPHQANLRIIDVLVDRLGVPEHVVVS--RDAEDTGNTSSAS 293
Query: 338 VFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLT 374
V LD + G ++ G G GL+
Sbjct: 294 VALALDRLV----RSGAVPGG---GPALMIGFGAGLS 323
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Length = 354 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 5e-04
Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 48/215 (22%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD---ISNHER 230
RVL+ D +++D D +L FGD +
Sbjct: 149 RVLLAVGDTISKMIDPT-------DRSTSLL-----FGDAGTMTALETSNGDAAAHFIIG 196
Query: 231 T---LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLD---V-PVAIGKYIGKCLSNAM 283
+ L + ++ L +D + + + K +S +
Sbjct: 197 ADGKGARNLIVPSGGFKPYDAAADERMAGKS-PECLFMDGGEIFNFTLNA-VPKLVSRTL 254
Query: 284 SPIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVF 339
G D ++ H ++ + K GL +++ + + EYGN AS+
Sbjct: 255 DIAGRDKDSYDA----FLFHQANLFMLKHLAKKAGLPAERVPVN---IGEYGNTSCASIP 307
Query: 340 FILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLT 374
++ ++R L +FG G G +
Sbjct: 308 LLITT----ELKDRLKEETLQL---GMFGFGVGYS 335
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Length = 331 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 53/189 (28%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD------ISN 227
L+V D LD D L FGDGAGA ++ AG ++
Sbjct: 133 SALLVGVDTFSHTLDPA-------DRSTRAL-----FGDGAGAVVLRAGDAEEEGALLAF 180
Query: 228 HERT---LFQVLSC-----TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279
+ F +L + + NY K ++G A+ + + +
Sbjct: 181 DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKA--VFGQ-------AVTQ-MSDSV 230
Query: 280 SNAMSPIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGA 335
+ +G V H ++ V L L +++ ++ + E GN A
Sbjct: 231 RRVLDRVGWQASDLHH----LVPHQANTRILAAVADQLDLPVERVVSN---IAEVGNTVA 283
Query: 336 ASVFFILDE 344
AS+ L
Sbjct: 284 ASIPLALAH 292
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Length = 313 | Back alignment and structure |
|---|
Score = 40.1 bits (95), Expect = 7e-04
Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 51/186 (27%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLD----VLVVQAVFGDGAGAAIIGAGPD----ISNHE 229
+LVV +D ++ D D VL FGDGAGA IIG + IS
Sbjct: 133 NILVVGADKLSKITDLT-------DRSTAVL-----FGDGAGAVIIGEVSEGRGIISYEM 180
Query: 230 RT---LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI 286
+ + L + + +E ++ A+ +G + +
Sbjct: 181 GSDGTGGKHL-----YLDKDTGKLKMNGRE--VFKF-------AVRI-MGDASTRVVEKA 225
Query: 287 GIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFIL 342
++ D ++ H +++ + LG+ KDK+ S + +YGN AAS+ +
Sbjct: 226 NLTSDDIDL----FIPHQANIRIMESARERLGISKDKMSVS---VNKYGNTSAASIPLSI 278
Query: 343 DEVRKK 348
D+ K
Sbjct: 279 DQELKN 284
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Length = 359 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 50/195 (25%)
Query: 180 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAV-FGDGAGAAIIGAGPD-----ISNHER- 230
VLVVC ++ + +D D ++ GDGAGA ++ AG +
Sbjct: 156 HVLVVCGEVLSKRMDCS-------DRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRLGA 208
Query: 231 --TLFQVLSC-----------TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277
F +L + + + + + ++ H A + +
Sbjct: 209 DGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRP--MFEH-------ASQT-LVR 258
Query: 278 CLSNAMSPIGIS----DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNV 333
++ ++ D + H ++D V++ LG+ + K + + GN+
Sbjct: 259 IAGEMLAAHELTLDDIDH----VICHQPNLRILDAVQEQLGIPQHKFAVT---VDRLGNM 311
Query: 334 GAASVFFILDEVRKK 348
+AS L
Sbjct: 312 ASASTPVTLAMFWPD 326
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 38.8 bits (89), Expect = 9e-04
Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 26/56 (46%)
Query: 56 ERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKE 111
E+Q + K L + LK Y A D P L A+KA E
Sbjct: 18 EKQALKK----L-QASLK------LY-AD----------DSAPAL----AIKATME 47
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 100.0 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 100.0 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 100.0 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 100.0 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 100.0 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 100.0 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 100.0 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 100.0 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 100.0 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 100.0 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 100.0 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 100.0 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 100.0 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 100.0 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 100.0 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 100.0 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 100.0 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 100.0 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 100.0 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 100.0 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 100.0 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 100.0 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 100.0 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 100.0 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 100.0 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 100.0 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 100.0 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 100.0 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 100.0 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 100.0 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 100.0 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 100.0 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 100.0 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 100.0 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 100.0 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 100.0 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.96 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.88 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.87 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.86 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 99.85 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 99.85 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 99.84 | |
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 99.84 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 99.84 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 99.83 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.82 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 99.82 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 99.81 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.8 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 99.8 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.8 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 99.8 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 99.79 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 99.78 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.78 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 99.77 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.77 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.77 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.75 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 99.74 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.74 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 99.74 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 99.73 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.73 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.72 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 99.72 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 99.68 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 99.67 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 99.62 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.38 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.34 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.04 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.66 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.65 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.63 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 94.62 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 93.79 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 93.59 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 93.31 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 93.2 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 93.16 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 93.13 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 92.93 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 92.89 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 92.85 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 92.82 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 92.66 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 92.53 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 92.39 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 91.38 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 90.07 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 89.8 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 89.55 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 87.57 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 87.51 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 85.41 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 85.19 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 84.63 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 83.9 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 83.79 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 83.66 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 83.57 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 81.01 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 80.99 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 80.89 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 80.7 |
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-67 Score=516.71 Aligned_cols=379 Identities=51% Similarity=0.914 Sum_probs=338.5
Q ss_pred cCCCC--CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC
Q 036844 6 SNQRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA 83 (390)
Q Consensus 6 ~~~~~--~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~ 83 (390)
..||+ +++|.|+|+|+|+++++|+|+.+.+.++.+++..++++++..+|++++||++||++.+++++.++++++.+..
T Consensus 9 ~~~~~~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~ 88 (393)
T 3ov2_A 9 REQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKRYLHLTEEILKERPKLCSYKE 88 (393)
T ss_dssp HHHSCSSCCEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHSGGGGSSSS
T ss_pred cccCCCCCeEEEEEEeeCCCcccCHHHHHHHHHHhhcccchHHHHHHHHHHHHhcCCceEEeecChhhhccCcccccCCC
Confidence 34566 7999999999999999999999987666555544556777889999999999999999888888888899999
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHH
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGG 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~ 163 (390)
|++++|++.|.+...+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++++|+|++
T Consensus 89 p~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~ 168 (393)
T 3ov2_A 89 ASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGA 168 (393)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999987534799999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeec
Q 036844 164 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTI 243 (390)
Q Consensus 164 ~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
.||.+|..++++|+.++||||++|.+|..+.+|.|.+.+++.+..+|||||+|+||++++. .++..+.+++...++..+
T Consensus 169 ~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~-~~~~~~~~~~~~~~~~~~ 247 (393)
T 3ov2_A 169 AMLRIAKDLAENNRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPL-EGIEKPIYEIAAAMQETV 247 (393)
T ss_dssp HHHHHHHHHHHHSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC-TTTCCCSEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEeccchhccCCcccchhhhcccccccCccEEEEEEecCC-CcccCceeEEEecCcEEe
Confidence 9999999999999999999999999986677777655556678999999999999998775 333334578887777788
Q ss_pred CCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCceeEEEcCCCHHHHHHHHHHcCCCcccchhH
Q 036844 244 PDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWAS 323 (390)
Q Consensus 244 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~h~~~~~~~~~~~~~lgi~~e~~~~~ 323 (390)
|.+.+.+.|.+.+.|+.+.+++++|+++.+.++++++++|+++|++.++|++|++||+|.++++.++++||+|++|+..+
T Consensus 248 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~v~Hq~n~~i~~~v~~~Lgl~~ek~~~s 327 (393)
T 3ov2_A 248 AESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNWAIIDAIEAKLQLSPDKLSTA 327 (393)
T ss_dssp TTCTTSEEEEEETTEEEEEECTTHHHHHHTTSHHHHHHHHGGGTCCSGGGSEEEECCCCHHHHHHHHHHHTCCTTTTHHH
T ss_pred cCCcccCceeeeCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCcccCcEEEECCCChHHHHHHHHHcCCCHHHHHHH
Confidence 99888888988888988888999999999999999999999999994266699999999999999999999999999999
Q ss_pred HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 324 RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 324 ~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
|+++++||||+|||+|++|++++++..++|++++|.|.|++++++||+|++|++++|||.+.
T Consensus 328 ~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 328 RHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp HHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcCCCCCCCeEEEEEECccceeeeeeeEEccc
Confidence 99999999999999999999999764445889988555899999999999999999999875
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-65 Score=498.46 Aligned_cols=373 Identities=46% Similarity=0.824 Sum_probs=324.5
Q ss_pred cCCCC--CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC
Q 036844 6 SNQRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA 83 (390)
Q Consensus 6 ~~~~~--~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~ 83 (390)
..||. +++|.|+|+|+|+++++|+|+.+.+.+..+++..++++++.+||++++||++||++.+++++.++++++.+..
T Consensus 3 ~~~~~~~~~~I~~ig~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~e~~~~~~~~~~~~~ 82 (387)
T 3oit_A 3 RSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTEEMLSAHPEFVDRDA 82 (387)
T ss_dssp CCCCCSSCCEEEEEEEECCSEEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTSSCCEEEESCCHHHHHHCGGGTCTTS
T ss_pred cccCCCCCeEEEEEEeeCCCceecHHHHHHHHHHHhCccchHHHHHHHHHHHHhcCcceeeeecCHHHhccCccccccCC
Confidence 34666 7999999999999999999999987655555544566777889999999999999999998888888899999
Q ss_pred CChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHH
Q 036844 84 PSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGG 163 (390)
Q Consensus 84 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~ 163 (390)
|++++|++.|.++..+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+.++++++++|+|++
T Consensus 83 p~~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~ 162 (387)
T 3oit_A 83 PSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGC 162 (387)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCcccHHHHHHHHhCCCCCcceeeEECchhHHHH
Confidence 99999999999999999999999999999999999999999999997789999999999999987534789999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeec
Q 036844 164 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTI 243 (390)
Q Consensus 164 ~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
.||.+|..++++|+.++||||++|.+|..|.+|.|.+.+++.+..+|||||+|+||++++. +...+.+++.+.++...
T Consensus 163 ~al~~A~~~i~sg~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lFGDGAaA~vl~~~~~--~~~~~~~~~~~~~~~~~ 240 (387)
T 3oit_A 163 AALRLAKDLAENSRGARVLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD--DVERPLFEIVSAAQTII 240 (387)
T ss_dssp HHHHHHHHHHHSSTTCEEEEEEEECGGGTCCCCCSSSCHHHHHHHHBCCEEEEEEEESSCC--SSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEEeccchhccCccccchHhhhcccccccceEEEEEecCCC--cccCCceEEEecccEEe
Confidence 9999999999999999999999999986687777655566778999999999999998763 12224578888777888
Q ss_pred CCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccC----CCCCCCceeEEEcCCCHHHHHHHHHHcCCCccc
Q 036844 244 PDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPI----GISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDK 319 (390)
Q Consensus 244 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~----gl~~~~di~~i~h~~~~~~~~~~~~~lgi~~e~ 319 (390)
|.+.+.+.|.+.++|+.+.+++++|+++.+.++++++++|+++ |++.++|++|++||+|.++++.++++||+|++|
T Consensus 241 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~~~~~L~~~~~~~gl~d~d~~~~v~Hq~n~~il~~v~~~Lgl~~ek 320 (387)
T 3oit_A 241 PESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTIMDQVDAALGLEPGK 320 (387)
T ss_dssp TTCTTSEEEEECSSSEEEEECTTHHHHHHHHHHHHHHHHTGGGCC------GGGSEEEECCCCHHHHHHHHHHHTCCTTT
T ss_pred CCChhhccceeecCCeEEEECcHHHHHHHHHHHHHHHHHHHhhcccCCCCcccccEEEECCCCHHHHHHHHHHcCCCHHH
Confidence 9998888898888898888899999999999999999999999 987336668999999999999999999999999
Q ss_pred chhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCC---CCCceEEEEEEcccccceeeeeEeecC
Q 036844 320 LWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG---EGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 320 ~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G---~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+..+|+++++||||+|||+|++|+++.++ ++++| .++|++++++||+|++|++++||+.+.
T Consensus 321 ~~~s~~~l~~~GNtssAsip~~L~~~~~~-----~~~~G~~g~~~d~vll~~fG~G~t~~~~ll~~~~~ 384 (387)
T 3oit_A 321 LAASRRVLSDYGNMSGATVIFALDELRRQ-----RKEAAAAGEWPELGVMMAFGPGMTVDAMLLHATSH 384 (387)
T ss_dssp THHHHHHHHHHCBCGGGHHHHHHHHHHHC---------------CCEEEEEEEETTTEEEEEEEEECC-
T ss_pred HHHHHHHHHHhCchHHhHHHHHHHHHHHh-----hhccCCCCCCCCEEEEEEecccceeeeeeeEeccc
Confidence 99999999999999999999999998764 35554 112799999999999999999998754
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-59 Score=462.50 Aligned_cols=368 Identities=59% Similarity=1.001 Sum_probs=315.8
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+.....++..+++.++.+||++++||++||++.+++.+..++...++..|++++|+
T Consensus 12 ~~~I~gig~~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~p~~~~~~~~~~~~r~ 91 (387)
T 3a5r_A 12 LATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEILKENPNIAAYEATSLNVRH 91 (387)
T ss_dssp CEEEEEEEEECCSCEEETTTHHHHHHHHTTCTTCHHHHHHHHHHHHTTTCCEEECSCCHHHHHHCHHHHSSSSSCHHHHH
T ss_pred CcEEEEeeecCCCcccCHHHHHHHHHHhcccccchhhHHHHHHHHHhCCCCceEEecChhhhccCcccccccCCCHHHHH
Confidence 58999999999999999999998764333222233444557899999999999999888766666666667789999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.+.++..+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+++||++..+.++++++++|+|++.||.+|.
T Consensus 92 ~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~ 171 (387)
T 3a5r_A 92 KMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAK 171 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998878899999999999998764237899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.+|++|..++||||++|.+|..|.+|.+.+++++....+|||||+|+||++.+. .++..+.+++.+.+....|.+.+.+
T Consensus 172 ~~i~~g~~~~vLvvg~e~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~-~~~~~~~~~l~~~~~~~~p~~~~~~ 250 (387)
T 3a5r_A 172 DIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQAILGDGAAAVIVGADPD-LTVERPIFELVSTAQTIVPESHGAI 250 (387)
T ss_dssp HHHHHSTTCEEEEEEEECCTTTCCCCCSSCCSSTTHHHHBCCEEEEEEEESSCC-TTTCCCCEEEEEEEEEECTTCTTSE
T ss_pred HHHHhCCCCEEEEEEEeccchhhcCCCccchhhccccceeccceeEEEEecCCC-ccccCCceEEEeeeEEEeCCChHhc
Confidence 999999999999999999987566676544444567899999999999998765 3332234677777767778887777
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCC-CCCceeEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS-DWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~-~~~di~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.|.+.+.|+.+.+++++|+++.+.++++++++|+++|++ . +|++|++||+|.++++.+++.||+|++|+..+|+++++
T Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~-~di~~v~Hq~~~~i~~~~~~~lgl~~ek~~~s~~~l~~ 329 (387)
T 3a5r_A 251 EGHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDW-NSLFWIAHPGGPAILDQVTAKVGLEKEKLKVTRQVLKD 329 (387)
T ss_dssp EEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCG-GGSEEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHH
T ss_pred CceEcCCCeEEEecchHHHHHHHHHHHHHHHHHHhcCCCCh-hheeEEECCCCHHHHHHHHHHcCCChHHhHHHHHHHHh
Confidence 787777777777899999999999999999999999998 5 77889999999999999999999999999987778999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCC-----CCCceEEEEEEcccccceeeeeEeecC
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTG-----EGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G-----~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
||||++||+|++|++++++ |+ ++| +|.|+|++++||+|++|++++|||.+.
T Consensus 330 ~GNtssAsi~~~L~~~~~~----g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 385 (387)
T 3a5r_A 330 YGNMSSATVFFIMDEMRKK----SL-ENGQATTGEGLEWGVLFGFGPGITVETVVLRSVPV 385 (387)
T ss_dssp HCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred cCCcchhHHHHHHHHHHHh----cc-ccCCCCCCCCcceEEEEEecCcceeeehhheeccc
Confidence 9999999999999999987 54 444 444899999999999999999999864
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-59 Score=465.05 Aligned_cols=372 Identities=57% Similarity=0.947 Sum_probs=317.9
Q ss_pred CCC--CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCC-C
Q 036844 8 QRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNA-P 84 (390)
Q Consensus 8 ~~~--~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~-~ 84 (390)
||+ +++|.++|+|+|+++++|+++.+.+.....++..+++.++.+||++++||++||++.+++++..+|++..+.. |
T Consensus 33 ~~~~~~~~I~gig~~lP~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~a~~~~~~~~~p~~~~~~~~~ 112 (413)
T 1xes_A 33 QRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVP 112 (413)
T ss_dssp HSCCSCEEEEEEEEECCSCEEEGGGHHHHHHHHTTCTTCHHHHHHHHHHHHTSCCCEEECSCCHHHHHTCHHHHSSSSSC
T ss_pred ccCCCCeEEEEEeecCCCCccCHHHHHHHHHHhccccchhhhHHHHHHHHhhcCcCceEEeeChhhhccCccccccccCC
Confidence 444 6999999999999999999999887443322223344456789999999999999988876666666666666 8
Q ss_pred ChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHH
Q 036844 85 SLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGT 164 (390)
Q Consensus 85 ~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~ 164 (390)
++++|++.|.+...+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+.+||++..+.++++++++|+|++.
T Consensus 113 ~~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~ 192 (413)
T 1xes_A 113 SLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGT 192 (413)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCCCEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHH
T ss_pred CHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccchHHHHHHHHcCcCCccchhceecCccHHHHH
Confidence 99999999999999999999999999999999999999999999877899999999999998754227899999999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecC
Q 036844 165 VIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIP 244 (390)
Q Consensus 165 al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 244 (390)
||.+|..+|++|..++|||+++|.+|..|.+|.+.+.++....++|||||+|+||++.+. .++....+++.+.+....|
T Consensus 193 AL~~A~~~i~~G~~~~vLvvg~E~~s~~~~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~-~~~~~~~~~l~~~~~~~~p 271 (413)
T 1xes_A 193 VLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPI-PQVEKACFEIVWTAQTVVP 271 (413)
T ss_dssp HHHHHHHHHHTSTTCCEEEEEEECTTTTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC-TTTSCCSEEEEEEEEEECT
T ss_pred HHHHHHHHHHcCCCCEEEEEEehhhhhhhcCCCccchhhcccceeEecccEEEEEecCCC-ccccCCceEEEeeeeEEcC
Confidence 999999999999999999999999987566666544455667899999999999998765 3322234677777766788
Q ss_pred CCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCceeEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 245 DTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 245 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
.+++.+.|.+.++|+.+.+++++|+++.+.++++++++|+++|++.++|++|++||+|.++++.+++.||+|++|+..+|
T Consensus 272 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~d~~di~~v~Hq~~~~i~~~~~~~Lgl~~ek~~~s~ 351 (413)
T 1xes_A 272 NSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTR 351 (413)
T ss_dssp TCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHHHHHHHTTCCTTTTHHHH
T ss_pred CChhhcCcEEecCceEEEecccHHHHHHHHHHHHHHHHHHhcCCCCccceeEEECCCCHHHHHHHHHHcCCChHHhHHHH
Confidence 88777778777777777789999999999999999999999999822778899999999999999999999999999877
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCC-----CCCceEEEEEEcccccceeeeeEeecC
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTG-----EGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G-----~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+++++||||++||+|++|++++++ |+ ++| +|.|+||+++||+|++|++++|||.+.
T Consensus 352 ~~l~~~GNtssAsi~~~L~~~~~~----g~-~~G~~~~G~~~d~vll~~fG~G~t~~~~ll~~~~~ 412 (413)
T 1xes_A 352 HVMSEYGNMSSACVHFILDQTRKA----SL-QNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 412 (413)
T ss_dssp HHHHHHCBCGGGHHHHHHHHHHHH----HH-HTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHhcCcCchhhHHHHHHHHHHh----cc-ccCCCCCCCCcceEEEEEecCCcEEeEEEEEeccC
Confidence 889999999999999999999987 54 444 444899999999999999999999853
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-61 Score=468.48 Aligned_cols=324 Identities=22% Similarity=0.230 Sum_probs=271.1
Q ss_pred cccccCCCC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccC
Q 036844 2 TTVKSNQRP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCC 80 (390)
Q Consensus 2 ~~~~~~~~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~ 80 (390)
.|+|+.+|| ..+|.|+|+|+|+++++|+|+.+.+ ..+ .+||.+++||++||++.++|+
T Consensus 3 ~~~~~~~~~~~srI~g~g~ylP~~~v~n~el~~~~---~~~---------~e~I~~rtGI~~R~~a~~~e~--------- 61 (350)
T 4ewp_A 3 VTLKQHERPAASRIVAVGAYRPANLVPNEDLIGPI---DSS---------DEWIRQRTGIVTRQRATAEET--------- 61 (350)
T ss_dssp CCCCCCCCCSEEEEEEEEEECCSCEEEHHHHTTTT---TCC---------HHHHHHHHCCSEEECCCSSCC---------
T ss_pred cccccccCCCCCEEEEEEEEcCCCeEcHHHHHHHh---CCC---------HHHHHhccCceEEEEcCCCCC---------
Confidence 478999999 7899999999999999999998764 222 378999999999999987773
Q ss_pred CCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeecccc
Q 036844 81 YNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGC 159 (390)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C 159 (390)
+.+||++|+++||+++|++++|||+||++|+++ +..|+++++||++||+++.+ +|++++||
T Consensus 62 ----------------~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~~~~--a~di~~~C 123 (350)
T 4ewp_A 62 ----------------VPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGATPAP--AYDVSAAC 123 (350)
T ss_dssp ----------------HHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCTTSC--EEEEECGG
T ss_pred ----------------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCCCce--EEEeecch
Confidence 899999999999999999999999999999999 88999999999999999876 89999999
Q ss_pred chHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeee
Q 036844 160 YMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCT 239 (390)
Q Consensus 160 ~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~ 239 (390)
+|+++||++|..++++|+.++||||++|.+|. +.++.+ +.+..+|||||+|+||++.+. .++.. ..+...+
T Consensus 124 ~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~-~~d~~~-----~~~~~lfgDGA~A~vl~~~~~-~~~~~--~~~~sdg 194 (350)
T 4ewp_A 124 AGYCYGVAQADALVRSGTARHVLVVGVERLSD-VVDPTD-----RSISFLLGDGAGAVIVAASDE-PGISP--SVWGSDG 194 (350)
T ss_dssp GHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TTTGGGBCEEEEEEEEEEESS-CCBCC--CEEEECG
T ss_pred hhHHHHHHHhhhhhhCCCccceeEeeeeecee-cccccc-----cccccccccchheeeeecccC-CCccc--eeeeecc
Confidence 99999999999999999999999999999996 445543 346789999999999998765 33211 1222211
Q ss_pred ee----ecCCCC--------------CceeeEeecce--eEEE-eCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEE
Q 036844 240 QT----TIPDTE--------------NYITGQLKEMG--IYGH-LSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYV 297 (390)
Q Consensus 240 ~~----~~p~~~--------------~~~~~~~~~~g--~~~~-~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 297 (390)
.. ..+... +...+...+.. ..+. .++++|+++.+.++++++++|+++|+++ +|| +|+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~did~~v 273 (350)
T 4ewp_A 195 ERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGPSVFRWAVWSMAKVAREALDAAGVEP-EDLAAFI 273 (350)
T ss_dssp GGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHHHHHHHHHHTHHHHHHHHHHHHTCCG-GGEEEEE
T ss_pred cccceeeecCCccccCcccccccccCCccccccccccccceeEehhHHHHHHHHHhhhHHHHHHHHhhcCCh-hHhceEE
Confidence 10 111110 00000000011 1233 3789999999999999999999999997 999 999
Q ss_pred EcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEccccccee
Q 036844 298 LHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVET 377 (390)
Q Consensus 298 ~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga 377 (390)
+||+|+++++.+++.||+|++++... ++++||||+|||+|++|++++++ |++++| |+|++++||+|++|++
T Consensus 274 ~Hq~~~~i~~~~~~~Lgl~~~~~~~~--~l~~~GNtssasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~ 344 (350)
T 4ewp_A 274 PHQANMRIIDEFAKQLKLPESVVVAR--DIADAGNTSAASIPLAMHRLLEE----NPELSG---GLALQIGFGAGLVYGA 344 (350)
T ss_dssp ECCSCHHHHHHHHHHTTCCTTSEECC--THHHHCBCGGGHHHHHHHHHHHH----CGGGTT---SEEEEEEEETTTEEEE
T ss_pred ecCCCHHHHHHHHHHcCcChHhEEec--ccccccchHHHHHHHHHHHHHHh----CCCCCc---CEEEEEEEchhhEeEE
Confidence 99999999999999999999997642 59999999999999999999998 999999 9999999999999999
Q ss_pred eeeEee
Q 036844 378 VVLQSF 383 (390)
Q Consensus 378 ~ll~~~ 383 (390)
++|||+
T Consensus 345 ~vlr~P 350 (350)
T 4ewp_A 345 QVVRLP 350 (350)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999995
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-59 Score=466.51 Aligned_cols=368 Identities=23% Similarity=0.297 Sum_probs=301.0
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+.... .+. ...++..+|++++||++||++.+.+ .+....+..|++++|+
T Consensus 31 ~v~I~gigt~lP~~~v~n~el~~~~~~~~-~~~--~~~~~~~~i~~~tGI~~R~~~~~~~----~p~~~~~~~ps~~~r~ 103 (465)
T 3e1h_A 31 GLSITGLGVQYPPYSLGPDAIDILSKRYH-PES--PAMKKVLAINRYTGIDQRSSIGNPD----HPLVNKPNPPTVKELH 103 (465)
T ss_dssp CEEEEEEEEECCSSCCBCTHHHHHTCSSS-CCC--HHHHHHHHHTTTSCCCCBCCSSCTT----CGGGSSSSCCCHHHHH
T ss_pred CEEEEEEEEECCCcEEcHHHHHHHHHHhc-ccc--hhHHHHHHHHHhcCCceEEEeeccc----CcccccccCCCHHHHH
Confidence 79999999999999999999987653221 111 1123455799999999999997643 1333456789999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A 169 (390)
+.|.+.+.+|+++|+++||+++|++++|||+||++|++++..|+++.+|+++||+++.+. ++++ +++|+|+++||.+|
T Consensus 104 ~~~~~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~dv~~~~Csgg~~AL~~A 182 (465)
T 3e1h_A 104 EVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELGLSDRLE-KVLLHGIGCSGGLAALRTA 182 (465)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHTCCTTCE-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhCCCCCee-EEEecCCcchHHHHHHHHH
Confidence 999999999999999999999999999999999999888889999999999999998653 6888 79999999999999
Q ss_pred HHHHHc----CCCCeEEEEEeeccccccCCCCcc----chhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee
Q 036844 170 KDIAEN----NPGARVLVVCSDIRVLDFHEPSET----HLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241 (390)
Q Consensus 170 ~~ll~~----g~~~~vLvv~~d~~s~~~~~~~~~----~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
..++++ |..++||||++|++|..+ ++... ..+++.+..+|||||+|+||++++...+.....+++.+....
T Consensus 183 ~~~i~a~~~~G~~~~vLVvg~E~~S~~~-~~~~~~~~~~~~d~~t~~LFGDGAaAvVl~~~~~~~~~~~~~~~l~~~~~~ 261 (465)
T 3e1h_A 183 ANLCLGHTARGKPARILVLALEVSTTMV-RSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENR 261 (465)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEECCGGGH-HHHHHHHHHHTCCCCHHHHBCCEEEEEEEECCTTCCTTCCCSEEEEEEEEE
T ss_pred HHHHhcccccCCCCEEEEEEEeecchhc-CcccccccccccccccccccccceeEEEEEccCCCccccccceeeccceEE
Confidence 999997 889999999999998644 22100 012356789999999999999875411112235677766667
Q ss_pred ecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhcc-------CCCCCCCceeEEEcCCCHHHHHHHHHHcC
Q 036844 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSP-------IGISDWNSLFYVLHPGGDGLIDQVEKNLG 314 (390)
Q Consensus 242 ~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~-------~gl~~~~di~~i~h~~~~~~~~~~~~~lg 314 (390)
..|.+.+.+.|.+.+.|+.+++++++|+++.+.++++++++|++ +|++. +||.|++||+|++|++.++++||
T Consensus 262 ~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~L~~~g~~L~~agl~~-~DId~~~Hqan~rIl~~v~~~Lg 340 (465)
T 3e1h_A 262 VIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKP-ADFDWAMHPGGATILSGAESAMG 340 (465)
T ss_dssp ECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHGGGSCTTSCSG-GGSEEEECCSSHHHHHHHHHHHT
T ss_pred EecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHHHHhccccccccCCCH-HHceEEecCCChHHHHHHHHHhC
Confidence 78988888888888888888889999999999999999999887 67895 99933499999999999999999
Q ss_pred CCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCC-CCceEEEEEEcccccceeeeeEeecC--CCCCC
Q 036844 315 LGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGE-GLDCGVLFGCGPGLTVETVVLQSFPI--DSTNW 390 (390)
Q Consensus 315 i~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~-~~d~vll~~~G~G~~~ga~ll~~~~~--~~~~~ 390 (390)
+|++|+..+++++++||||+|||+|++|++++++.. |++++|. +.|++++++||+|++|++++|||... ++|+|
T Consensus 341 l~~ek~~~s~~~l~~yGNtsSASip~aL~~~~~~~~--g~l~~Gg~~~d~vll~gfG~Glt~~~~llr~~~~~~~~~~~ 417 (465)
T 3e1h_A 341 LTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM--DALAPGGKVKEYVVGCAFGPGINVEMCMLKRRMNAPARTTT 417 (465)
T ss_dssp CCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHTSTTT--TSCSSSSCCCSEEEEEEEETTTEEEEEEEEECCC-------
T ss_pred cCHHHhHHHHHHHhcceechHhHHHHHHHHHHHhcc--cccCCCCCCCCEEEEEEEhHHHhhhheeeEEeccccCCCCC
Confidence 999999988889999999999999999999987511 3466541 12899999999999999999999763 55566
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-57 Score=444.04 Aligned_cols=353 Identities=23% Similarity=0.280 Sum_probs=300.0
Q ss_pred CCC--CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhh---------h--
Q 036844 8 QRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILK---------E-- 74 (390)
Q Consensus 8 ~~~--~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~---------~-- 74 (390)
||+ +++|.+||+++|+++++|+++.+.+.+.. ++. .++++ ..+|++++||++||++.|.++.. .
T Consensus 21 ~~~~m~~~i~~i~ta~P~~~~~q~~~~~~~~~~~-~~~-~~~~~-~~~i~~~sgI~~R~~~l~~~~~~~~~~~~~~~~~~ 97 (413)
T 3v7i_A 21 QSNAMAAYLCAPAVIHGEHSVETREIVEEVRGRH-PHA-PWAPR-IDGIAASTGIESRGWMLPLEAAVAPGGGGDLGAAR 97 (413)
T ss_dssp ---CCCEEEECCEEEECSEEEEHHHHHHHHHHHC-SSC-SSGGG-HHHHHHHHTCSEEEESSCHHHHHSCCCCCCCHHHH
T ss_pred ccCCCCeEEEeeEeeCCCcccCHHHHHHHHHHhc-ccc-hhHHH-HHHHHHhCCcCeeeeecCHHHhccccccccccccc
Confidence 555 59999999999999999999999886543 222 23333 67899999999999999876540 0
Q ss_pred ----CCCcc-------------CCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHH
Q 036844 75 ----NPNMC-------------CYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADV 137 (390)
Q Consensus 75 ----~~~~~-------------~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~ 137 (390)
.+.++ .+..+++.+|+..+.+.+.+|+.+|+++||+++|++++|||+||++|++++..|+++.
T Consensus 98 ~~~~~~~~~n~~l~~~~~~~e~i~~rtgi~~R~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~ 177 (413)
T 3v7i_A 98 EALVRDGFTEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDV 177 (413)
T ss_dssp HHC------CHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSCCSSCHHH
T ss_pred ccccccccchhhhhhhcCcccceecCCCHHHhCcccccCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCCCcCHHHH
Confidence 01121 1457899999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHcCCCCccccceee-ccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEE
Q 036844 138 RLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGA 216 (390)
Q Consensus 138 ~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA 216 (390)
+|+.+||+++.+. .+++ +++|+|++.||.+|+.++++|+.++||||++|.+|..+ ++.|.+.++.+...+|||||+|
T Consensus 178 ~v~~~LGl~~~~~-~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~-~~~d~~~~~lv~~~LFGDGAaA 255 (413)
T 3v7i_A 178 ALANRLPLRGDTM-LLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY-QPADDTLESLIVRLLFADTAVA 255 (413)
T ss_dssp HHHHHTTCCTTCE-EEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC-CSSCCSTTHHHHHHHBCCEEEE
T ss_pred HHHHHhCCCCCce-EEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc-CccccchhhhhcceeeccccEE
Confidence 9999999998543 6788 99999999999999999999999999999999999755 5666555566678999999999
Q ss_pred EEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhc------cCCCCC
Q 036844 217 AIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS------PIGISD 290 (390)
Q Consensus 217 ~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~------~~gl~~ 290 (390)
+||++++. .+ +.+++.+..+..+|++.+.+.|.+.+.|+.+.+..+++. +++.++++++++|+ ++|++
T Consensus 256 vvl~~~~~-~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~-~v~~~~~~i~~~L~~~~~~~~~gl~- 329 (413)
T 3v7i_A 256 AVVTGRPR-PE---SVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPR-AVQETVTAMWEWLRVRYEDDPSSWH- 329 (413)
T ss_dssp EEEESSCC-TT---EEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHH-HHHHHHHHHHHHHHHHTSSSCTTCC-
T ss_pred EEEEecCC-CC---CCEEEEccccEEeCCCccccCccccCCceEEEECcHHHH-HHHHHHHHHHHHHhhccccccCCCc-
Confidence 99998764 21 356777666677898888888988888888888777885 55569999999999 88876
Q ss_pred CCce-eEEEcCCCHHHHHHHHHHcC--CCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEE
Q 036844 291 WNSL-FYVLHPGGDGLIDQVEKNLG--LGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLF 367 (390)
Q Consensus 291 ~~di-~~i~h~~~~~~~~~~~~~lg--i~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~ 367 (390)
| +|++||+|+++++.+++.|| +|++|+..+|.+++ ||||+|||+|++|++++ + +++++| |+++++
T Consensus 330 ---id~~v~Hq~~~~il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~-~----~~~~~G---d~vll~ 397 (413)
T 3v7i_A 330 ---PDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH-D----AGQKTG---SRAVLY 397 (413)
T ss_dssp ---CCEEEEECSSHHHHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-H----HCCCTT---CEEEEE
T ss_pred ---eeEEEECCCChHHHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-h----CCCCCC---CEEEEE
Confidence 5 99999999999999999999 99999977777899 99999999999999999 5 779999 999999
Q ss_pred EEcccccceeeeeEee
Q 036844 368 GCGPGLTVETVVLQSF 383 (390)
Q Consensus 368 ~~G~G~~~ga~ll~~~ 383 (390)
+||+|++|++++|||.
T Consensus 398 ~fG~Glt~~~~ll~w~ 413 (413)
T 3v7i_A 398 AAAPGLTATALEGEWL 413 (413)
T ss_dssp EEETTTEEEEEEEEEC
T ss_pred EECHHHhHhhhheEeC
Confidence 9999999999999994
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-56 Score=432.24 Aligned_cols=316 Identities=18% Similarity=0.209 Sum_probs=266.2
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.++ ... .+||++++||++||++.+++.
T Consensus 30 ~v~I~gig~~lP~~~v~n~~l~~~~~---~~~--------~~~i~~~tGI~~R~~a~~~~~------------------- 79 (365)
T 3gwa_A 30 RAAIADIAGHLPEQVLTNDVLAQLYP---DWP--------AEKILAKTGIRERRIAAPRET------------------- 79 (365)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHCT---TCC--------HHHHHHHHCCCEEEECCTTCC-------------------
T ss_pred cEEEEEEEEeCCCcEEcHHHHHHHcc---CCC--------HHHHHHhcCccEEEECCCCCC-------------------
Confidence 58999999999999999999998642 111 378999999999999987663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+.+||++.... +++++++|+|++.||.+|
T Consensus 80 ------~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~C~s~~~Al~~A 152 (365)
T 3gwa_A 80 ------AADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAG-ALDVNLGCSGYVYGLSLA 152 (365)
T ss_dssp ------HHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSE-EEEEECSTTHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCce-EEEecccChHHHHHHHHH
Confidence 899999999999999999999999999999998 889999999999999984333 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCC-ccccceeEEEeeee--------
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLFQVLSCTQ-------- 240 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~-------- 240 (390)
..+|++|..++|||+++|.+|..+ ++.| +.+..+|||||+|+||++++... ++ ..+.+.+.+.
T Consensus 153 ~~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----r~~~~lfGDGAaA~vl~~~~~~~~~i--~~~~~~s~g~~~~~~~~~ 224 (365)
T 3gwa_A 153 KGLVETGAARCVLLLTADTYSKYL-HPLD-----KSVRTLFGDGASATAVIAEHGELERI--GPFVFGTDGRGAPNLIVK 224 (365)
T ss_dssp HHHHHTTSCSEEEEEEEECGGGGS-CTTC-----HHHHTTBCCEEEEEEEEEECSSSCSE--EEEEEEECGGGGGGEEEC
T ss_pred HHHHHcCCCCEEEEEEEchhhccC-Cccc-----ccccccccceeEEEEEEecCCCCCce--EEEEEEEcCCCCCeEEec
Confidence 999999999999999999999743 5543 34678999999999999876511 11 1233333222
Q ss_pred ---eecCCCCCceeeEeecc------eeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH
Q 036844 241 ---TTIPDTENYITGQLKEM------GIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE 310 (390)
Q Consensus 241 ---~~~p~~~~~~~~~~~~~------g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~ 310 (390)
...|.+.+.+.|..... .+..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.++
T Consensus 225 ~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~ 303 (365)
T 3gwa_A 225 AGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEPR-ENIDCFVLHQANRFMLDALR 303 (365)
T ss_dssp SSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHH
T ss_pred CCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHH
Confidence 11233333344443322 222334788999999999999999999999996 999 9999999999999999
Q ss_pred HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 311 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.||+|++|+..+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 304 ~~Lgl~~ek~~~~---l~~~GNtssAsipl~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~ 365 (365)
T 3gwa_A 304 KKMKIPEHKFPVL---MEHCGNTVSSTLPLALETMRAN----GTLARG---MRLMLLGFGVGYSWAGCLVNF 365 (365)
T ss_dssp HHHTCCGGGSCCC---CTTTCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHhCCCHHHHHHH---HhcccchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 9999999999874 9999999999999999999998 999999 999999999999999999998
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-56 Score=424.30 Aligned_cols=309 Identities=20% Similarity=0.262 Sum_probs=261.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+.+|.|+|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.++++
T Consensus 9 ~~~~~~~g~ylP~~~v~n~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~~------------------- 57 (323)
T 3il3_A 9 NSRILSTGSYLPSHIRTNADLEKMV---DTS---------DEWIVTRSGIRERRIAAEDET------------------- 57 (323)
T ss_dssp EECCCEEEEECCSCEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEECCCTTCC-------------------
T ss_pred cCceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCCcEEEECCCCCC-------------------
Confidence 5679999999999999999998764 222 378999999999999977663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+.+|+++||+++|+++++||.||++++++ +..|+++.+|+.+||+++.+ +++++++|+|++.||.+|
T Consensus 58 ------~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~~C~s~~~al~~A 129 (323)
T 3il3_A 58 ------VATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAI--SFDLAAACTGFVYALSVA 129 (323)
T ss_dssp ------HHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCSSCE--EEEECCGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCCCcc--EEEECCccHHHHHHHHHH
Confidence 899999999999999999999999999999998 78999999999999997654 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee----ecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT----TIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~p~ 245 (390)
..+|++|..++|||+++|.+|..+ ++.+ +.+..+|||||+|+||++++. .++. .+.+.+.+.. ..|.
T Consensus 130 ~~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----~~~~~lfGDGA~A~vl~~~~~-~~i~--~~~~~s~g~~~~~~~~~g 200 (323)
T 3il3_A 130 DQFIRAGKVKKALVIGSDLNSRKL-DETD-----RSTVVLFGDGAGAVILEASEQ-EGII--STHLHASADKNNALVLAQ 200 (323)
T ss_dssp HHHHHTTSCSEEEEEEEEEGGGSC-CTTC-----TTTTTTBCEEEEEEEEEEESS-CCEE--EEEEEECCCCSCSEECCC
T ss_pred HHHHHCCCCCEEEEEEeecccccc-Cccc-----cccccccccceEEEEEEEcCC-CCeE--EEEEEEcCCCcceEEECC
Confidence 999999999999999999999743 4443 235789999999999998764 3321 1222222211 1232
Q ss_pred CCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 246 TENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
.... ....++..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+..+
T Consensus 201 ~~~~----~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~~~- 274 (323)
T 3il3_A 201 PERG----IEKSGYIEMQGNETFKLAVRELSNVVEETLLANNLDK-KDLDWLVPHQANLRIITATAKKLEMDMSQVVVT- 274 (323)
T ss_dssp CCTT----CSSCSCCEECHHHHHHHHHHHHHHHHHHHHHTTTCCT-TTCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC-
T ss_pred CCCC----CCCCCcEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCcCHHHhhcc-
Confidence 1110 1112222334788999999999999999999999997 999 99999999999999999999999999875
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 275 --l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~~ 323 (323)
T 3il3_A 275 --LDKYANNSAATVPVALDEAIRD----GRIQRG---QLLLLEAFGGGWTWGSALVRF 323 (323)
T ss_dssp --HHHHCBCGGGHHHHHHHHHHHT----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred --HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEC
Confidence 9999999999999999999998 899999 999999999999999999998
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-55 Score=426.04 Aligned_cols=318 Identities=18% Similarity=0.209 Sum_probs=265.4
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+. . ...+||.+++||++||++.+++
T Consensus 16 ~v~I~~ig~~lP~~~v~n~~l~~~~~---~--------~~~~~i~~~tGI~~R~~a~~~~-------------------- 64 (354)
T 4efi_A 16 GARIAGVVSCVPSKQVDNDYFVERFD---A--------SAVRDVVKMIGVNRRRWADAQT-------------------- 64 (354)
T ss_dssp SEEEEEEEEEECSCEEEGGGGTTTSC---H--------HHHHHHHHHHCCSEEECCCTTC--------------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhC---C--------CcHHHHHHhcCCeEEEEcCCCC--------------------
Confidence 79999999999999999999987531 1 1247899999999999997766
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
++.+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+++||++.... +++++++|+|++.||.+|
T Consensus 65 -----~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~A 138 (354)
T 4efi_A 65 -----SAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCL-ALDINLGCSGYPQALWLG 138 (354)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSE-EEEECCCTTHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCcc-EEeeCcccHHHHHHHHHH
Confidence 3899999999999999999999999999999998 889999999999999964333 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..+|++|..++|||+++|.+|.. .++.| +.+..+|||||+|+||++++. .+. ..+.+.+.+. ...|.
T Consensus 139 ~~~i~~g~~~~vLvvg~e~~s~~-~~~~d-----~~~~~lfGDGA~A~vl~~~~~-~~~--~~~~~~s~g~~~~~~~~~~ 209 (354)
T 4efi_A 139 MNLIQTGAAKRVLLAVGDTISKM-IDPTD-----RSTSLLFGDAGTMTALETSNG-DAA--AHFIIGADGKGARNLIVPS 209 (354)
T ss_dssp HHHHHTTSCSEEEEEEEECGGGG-CCTTC-----HHHHTTBCCEEEEEEEEECCS-CCE--EEEEEEECGGGGGGEECCS
T ss_pred HHHHHCCCCCEEEEEEechhccc-CCccc-----cccccccccceeEEEEeecCC-CCc--eEEEEEEcCCCcceEEecC
Confidence 99999999999999999999974 34543 346799999999999998775 221 1233433322 12222
Q ss_pred CC------Cc-eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 246 TE------NY-ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 246 ~~------~~-~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
.. +. ..+..+...+..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+
T Consensus 210 ~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~Lgl~~ 288 (354)
T 4efi_A 210 GGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAVPKLVSRTLDIAGRDK-DSYDAFLFHQANLFMLKHLAKKAGLPA 288 (354)
T ss_dssp SSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHTTCCG
T ss_pred CCCCCCccccccccccccccceEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHhCcCH
Confidence 11 10 00111111122234788999999999999999999999996 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+|+..+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||.+.
T Consensus 289 ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~fG~G~t~~~~ll~~~~~ 346 (354)
T 4efi_A 289 ERVPVN---IGEYGNTSCASIPLLITTELKD----RLKEET---LQLGMFGFGVGYSWASAALAVGPL 346 (354)
T ss_dssp GGSCCC---HHHHCBCGGGHHHHHHHHHSHH----HHHHSC---EEEEEEEEETTTEEEEEEEEECCC
T ss_pred HHHHHH---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheeeEEEECCc
Confidence 999875 8999999999999999999998 889999 999999999999999999999764
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-55 Score=433.32 Aligned_cols=339 Identities=20% Similarity=0.274 Sum_probs=271.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHh---cCCCchhHHH---------HHHHHHhhcCCccccccccchhhhhhCCCc
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRA---TNSEHKTELK---------EKFKRICERQPINKRYFHLTEEILKENPNM 78 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~---~~~~~~~~~~---------~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~ 78 (390)
+++|.|+|+|+|+++++|+|+.+.++.. .++++.++++ ...+||.+++||++||++.++++++ +
T Consensus 24 ~~~I~gig~~~P~~~v~n~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~I~~~tGI~~R~~a~~~~~~~--~-- 99 (392)
T 3led_A 24 PAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGEIEPLQPSSSEFIEKASGIKSRYVVAKPGIVD--P-- 99 (392)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHHHHHHHHHHHHTHHHHHTTSSCCCCCCCHHHHHHHHCCCEEEESCCGGGGC--T--
T ss_pred ceEEEEEEEeCCCceEcHHHHHHHHhhhhcccccccchhhhcccccccCCCcHHHHHHccCCceEEEecCccccc--c--
Confidence 6999999999999999999998866321 0111111111 0148999999999999998866432 1
Q ss_pred cCCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeecc
Q 036844 79 CCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQ 157 (390)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~ 157 (390)
.+..|++++|++.+.+.+.+|+++|+++||+++|++++|||+||++++++ +..|+++.+|+++||++ .+ ++++++
T Consensus 100 -~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~p~~a~~v~~~LGl~-~~--~~dv~~ 175 (392)
T 3led_A 100 -DVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAYPAMAIEVQNALGLG-GF--AFDMNV 175 (392)
T ss_dssp -TTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSBSCHHHHHHHHTTCC-SE--EEEEEC
T ss_pred -cccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCccHHHHHHHHHhCCC-Ce--EEEECC
Confidence 34578889999888888999999999999999999999999999999998 88999999999999994 43 899999
Q ss_pred ccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEe
Q 036844 158 GCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLS 237 (390)
Q Consensus 158 ~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~ 237 (390)
+|+|++.||.+|..+|++|..++||||++|.+|. +.++.| +.+..+|||||+|+||++++. .. ..+.+.+
T Consensus 176 aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~-~~d~~d-----r~t~~lFGDGA~A~vl~~~~~-~~---~~~~i~~ 245 (392)
T 3led_A 176 ACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG-HLNFRD-----RDSHFIFGDVATAAIVERADD-AQ---GGWSILG 245 (392)
T ss_dssp GGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG-GCCTTC-----TTTTTTBCEEEEEEEEEEGGG-CC---SSEEEEE
T ss_pred ccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC-cCCcCc-----ccCCcccccccEEEEEEecCC-CC---CCCeEEE
Confidence 9999999999999999999999999999999996 445543 235789999999999998764 11 1233333
Q ss_pred eeeeec-------CCC------CCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCH
Q 036844 238 CTQTTI-------PDT------ENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGD 303 (390)
Q Consensus 238 ~~~~~~-------p~~------~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~ 303 (390)
...... +.. .+.+.| ...+..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.
T Consensus 246 ~~~~s~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~g~~v~~~a~~~~~~~i~~~L~~~gl~~-~dId~~v~Hqan~ 321 (392)
T 3led_A 246 TKLKTQFSNNIRNNAGFLNRAWPEGRDK---ADKLFVQQGRKVFKEVVPLVSEMIIEHAREIGIDP-HGLKRMWLHQANI 321 (392)
T ss_dssp EEEEECCCSSEEBCCSGGGGGSGGGTTS---GGGSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECSSCH
T ss_pred EEEEEccccccccCCCcccCCCcccccc---ccceEEechHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCcEEEEcCCCH
Confidence 221111 100 011111 01122234788999999999999999999999996 999 999999999
Q ss_pred HHHHHHHHHc-C--CCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeee
Q 036844 304 GLIDQVEKNL-G--LGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380 (390)
Q Consensus 304 ~~~~~~~~~l-g--i~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll 380 (390)
++++.++++| | ++.+|+.. ++++||||++||+|++|+++ . +++++| |+|++++||+|++|++++|
T Consensus 322 ~i~~~~~~~llgl~~~~~k~~~---~l~~~GNtssAsipl~L~~~--~----~~~~~G---d~vll~gfG~G~t~~~~ll 389 (392)
T 3led_A 322 NMNEIIGRKVLGRDPTRDENVI---ILDDYANTSSAGSIIAFHKH--Q----DDMAQG---DLGLICSFGAGYSAGTVFV 389 (392)
T ss_dssp HHHHHHHHHHHTSCCCTTTBCC---CHHHHCBCGGGHHHHHHHHC--C----TTCCTT---CEEEEEEEETTTEEEEEEE
T ss_pred HHHHHHHHHhcCCCCCHHHHHH---HHhhhCccHHHHHHHHHHHH--h----CCCCCC---CEEEEEEEChhhEeEEEEE
Confidence 9999999996 6 67888876 49999999999999999985 3 679999 9999999999999999999
Q ss_pred Eee
Q 036844 381 QSF 383 (390)
Q Consensus 381 ~~~ 383 (390)
||.
T Consensus 390 ~~~ 392 (392)
T 3led_A 390 QKR 392 (392)
T ss_dssp EEC
T ss_pred EEC
Confidence 984
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-53 Score=414.72 Aligned_cols=352 Identities=29% Similarity=0.511 Sum_probs=294.4
Q ss_pred CC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChH
Q 036844 9 RP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLD 87 (390)
Q Consensus 9 ~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~ 87 (390)
+| +++|.|+|+|+|+++++|+++.+.+......+ .+..+..++|++++||++||++.++. ..++.+. -+++.
T Consensus 10 ~~~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~i~~~~Gi~~R~~~~~~~--~~~~~~~---~~~~~ 82 (374)
T 2h84_A 10 SNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHLVRDYT--KPENSIK---FRHLE 82 (374)
T ss_dssp --CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSC--HHHHHHHHHHHHTTCCCEECCSSCTT--SGGGCGG---GGGGC
T ss_pred CCCCeEEEEEEEeCCCcccCHHHHHHHHHHhhccC--hHHHHHHHHHHHhCCcCcceeecCcc--ccccccc---cCChH
Confidence 45 79999999999999999999998764322111 12233457899999999999987651 1222222 14677
Q ss_pred HHHHH---HHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeec-cccchHH
Q 036844 88 ARQAM---LIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN-QGCYMGG 163 (390)
Q Consensus 88 ~~~~~---~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~C~~~~ 163 (390)
+|+++ +.+...+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+.+||++.... ++++. ++|+|++
T Consensus 83 ~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCss~~ 161 (374)
T 2h84_A 83 TITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVE-RVSLNLMGCLAGL 161 (374)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCcCCCCc-eEEecCCcCHHHH
Confidence 78877 9999999999999999999999999999999999998778999999999999987432 78896 8999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeec
Q 036844 164 TVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTI 243 (390)
Q Consensus 164 ~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 243 (390)
.||.+|..+|++|..++|||+++|.++..+.+|.+ ++.....++|||||+|+||++.+. .. ....+++.+.++...
T Consensus 162 ~al~~A~~~i~~g~~~~vLv~g~e~~s~~~~~~~d--r~~~~~~~lfGDGA~A~vL~~~~~-~~-~~~~~~l~~~g~~~~ 237 (374)
T 2h84_A 162 SSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDG--GDQMVASSIFADGSAAYIIGCNPR-IE-ETPLYEVMCSINRSF 237 (374)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEEECCGGGCCCSSS--HHHHHHHHHBCCEEEEEEEESSCC-TT-CCCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEEecchhhcCCCC--HHHHhhhhhhccCcEEEEEecCCC-cc-cCCceeEEeeeeEEe
Confidence 99999999999999999999999999865545543 343456899999999999998764 21 112457777666677
Q ss_pred CCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCC------CCCCCce-eEEEcCCCHHHHHHHHHHcCCC
Q 036844 244 PDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIG------ISDWNSL-FYVLHPGGDGLIDQVEKNLGLG 316 (390)
Q Consensus 244 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g------l~~~~di-~~i~h~~~~~~~~~~~~~lgi~ 316 (390)
|.+.+.+.|...++|+.+.+++++|.++.+.+.++++++|+++| +++ +|| +| +||+|.++++.+++.||++
T Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~-~did~~-~H~~~~~i~d~~~~~lgl~ 315 (374)
T 2h84_A 238 PNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISA-KDCEFL-IHTGGKSILMNIENSLGID 315 (374)
T ss_dssp SSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCS-SSSEEE-ECCCCHHHHHHHHHHTTCC
T ss_pred CCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCCh-hhcCEe-ECCCCHHHHHHHHHHcCCC
Confidence 87777777777778877778899999999999999999999999 997 999 99 9999999999999999999
Q ss_pred cccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 317 KDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 317 ~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
++|+..+++++++||||++||+|++|++++++ ++ +| |+|++++||+|++|++++|||.
T Consensus 316 ~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~~~----~~--~G---d~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 316 PKQTKNTWDVYHAYGNMSSASVIFVMDHARKS----KS--LP---TYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp GGGGHHHHHHHHHHCBCTTHHHHHHHHHHHTC----SC--CC---SEEEEEEEETTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCchhhHHHHHHHHHHhh----cC--CC---CeEEEEEeccchhhhhhhheec
Confidence 99998766789999999999999999999987 65 78 9999999999999999999985
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-53 Score=414.99 Aligned_cols=348 Identities=23% Similarity=0.349 Sum_probs=294.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
.++|.++|+|+|+++++|+++.+.+.... .+. +. .+..+||++++||++||++.+.+.+. ..|++..|+
T Consensus 9 m~~I~gig~~~P~~~v~~~~l~~~~~~~~-~~~-~~-~~~~~~i~~~~GI~~R~~~~~~~~~~--------~~~~~~~r~ 77 (382)
T 1u0m_A 9 MATLCRPSVSVPEHVITMEETLELARRRH-TDH-PQ-LPLALRLIENTGVRTRHIVQPIEDTL--------EHPGFEDRN 77 (382)
T ss_dssp -CEECCCEEECCSEEEEHHHHHHHHHHHH-TTC-TT-HHHHHHHHHHTCCCEEEESSCHHHHT--------SCCCHHHHH
T ss_pred ceEEEEEEEeCCCcccCHHHHHHHHHHhc-cCh-hh-HHHHHHHHHhcCCCcceeecChhhhc--------cCCChhHHH
Confidence 58999999999999999999998764221 110 00 12356899999999999997765432 347899999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A 169 (390)
+.+.+...+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+.+||++.... ++++ +++|+|++.||.+|
T Consensus 78 ~~~~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCss~~~Al~~A 156 (382)
T 1u0m_A 78 KVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRA 156 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhCCCCCcc-eEEccCCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999988778999999999999987432 7888 89999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..+|++|..++|||+++|.++.. .+|.+.+++.....++|||||+|+||++.+. . .+++........+.+.+.
T Consensus 157 ~~~i~~g~~~~vLv~g~e~~s~~-~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~-~-----g~~i~~~~~~~~~~~~~~ 229 (382)
T 1u0m_A 157 HDFCTAYPEANALIVACEFCSLC-YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG-T-----GVRLERNGSYLIPKTEDW 229 (382)
T ss_dssp HHHHHHSTTCEEEEEEEEEGGGG-CCTTCCSHHHHHHHHHBCEEEEEEEEETTTC-S-----EEEEEEEEEEECSSCTTT
T ss_pred HHHHHcCCCCEEEEEEEeccchh-cCcccCCHHHhhccchhcCCcEEEEEeccCC-C-----CcEEEEeeeEecCChHHh
Confidence 99999999999999999999863 3565543434445799999999999997654 2 245665444445666666
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
+.|.....++.+.+++++|+...+.++ +++++|+++|+++ +|| +|++||.|.++++.+++.||++++|+..++++++
T Consensus 230 ~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~agl~~-~dId~v~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~~ 307 (382)
T 1u0m_A 230 IMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLT 307 (382)
T ss_dssp EEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHH
T ss_pred cCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 667666677777778999998888999 9999999999997 999 9999999999999999999999999987677899
Q ss_pred hcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecCC
Q 036844 329 EYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPID 386 (390)
Q Consensus 329 ~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~~ 386 (390)
+||||++||+|++|++++++ |++++| |++++++||+|++|++++|||..++
T Consensus 308 ~~Gnt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~vl~~~~~~ 358 (382)
T 1u0m_A 308 EYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQTAD 358 (382)
T ss_dssp HTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEECC-
T ss_pred HhCCchhhHHHHHHHHHHHh----cCCCCC---CEEEEEEEcccceeEEEEEEEeecc
Confidence 99999999999999999998 889999 9999999999999999999998654
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-53 Score=416.50 Aligned_cols=355 Identities=23% Similarity=0.370 Sum_probs=293.0
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCcccccc-ccchhhhhhCCCccCCCCCChHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYF-HLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~-a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
++|.++|+|+|+++++|+++.+.+.. .......++..+||++++||++||+ +.+.++... +....-+++.+|+
T Consensus 33 ~~I~~ig~~~P~~~v~n~~l~~~~~~---~~~~~~~~~~~~~i~~~tGI~~R~~~a~~~~~~~~---~~~~~p~~~~~r~ 106 (393)
T 1ted_A 33 AVIEGLATGTPRRVVNQSDAADRVAE---LFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFD---VFRREPATIRDRM 106 (393)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHHHT---C----CCTTHHHHHHHTSCCSEEECSSCTTSTTHH---HHTTCSSCHHHHH
T ss_pred cEEEEeeeeCCCcccCHHHHHHHHHH---hcccccHHHHHHHHHHhCCcCcceeeecChHhccc---ccccCCCCHHHHH
Confidence 89999999999999999999987632 1100000123578999999999999 876431100 0001124678999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A 169 (390)
+.+.+...+|+.+|+++||+++|+++++||+||+++++++..|+++.+|+.+||++..+. .+.+ +++|+|++.||.+|
T Consensus 107 ~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~~aCas~~~Al~~A 185 (393)
T 1ted_A 107 HLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGTA 185 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCccChHHHHHHHHcCcCCCcc-eeEeccchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999988778999999999999987542 5677 89999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccc-cceeEEEeeeeeecCCCCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHE-RTLFQVLSCTQTTIPDTEN 248 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~ 248 (390)
..+|++|..++|||+++|.++..+ ++ +.++++....++|||||+|+||++.+. .... ....++...++...+++..
T Consensus 186 ~~~i~~G~~~~vLv~g~e~~s~~~-~~-~~~r~~~~~~~lfGDGA~A~vL~~~~~-~~~~~~~~~~i~~~~~~~~~d~~~ 262 (393)
T 1ted_A 186 TNYVRAHPAMKALVVCIELCSVNA-VF-ADDINDVVIHSLFGDGCAALVIGASQV-QEKLEPGKVVVRSSFSQLLDNTED 262 (393)
T ss_dssp HHHHHHSTTCEEEEEEEEECGGGC-CC-CSSHHHHHHHHHBCEEEEEEEEEEECT-TSCCCTTCEEEEEEEEEECTTCTT
T ss_pred HHHHHcCCCCEEEEEEEEeccccC-CC-CCCHHHhhhhhhhcCccEEEEEecCCC-ccccCcceeeeeccceEEcCCchh
Confidence 999999999999999999998644 22 223455556899999999999987654 1100 1123666655555677666
Q ss_pred ceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHH
Q 036844 249 YITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVL 327 (390)
Q Consensus 249 ~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~ 327 (390)
.+.|.....|+.++.++++|+.+.+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||++++|+..+|+++
T Consensus 263 ~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~dId~~~~H~~~~~i~d~~~~~lgl~~~k~~~s~~~~ 341 (393)
T 1ted_A 263 GIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVL 341 (393)
T ss_dssp SEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHH
T ss_pred hccceecCCCeEEecCchHHHHHHHHHHHHHHHHHHHcCCCH-hHCCEEEECCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 667777767776667999999999999999999999999997 999 999999999999999999999999998777789
Q ss_pred hhcCCCccchHHHHHHHHHHhhhhhccc-cCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 328 REYGNVGAASVFFILDEVRKKSFEERKA-TTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 328 ~~~Gn~~sas~~l~L~~~~~~~~~~g~i-~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
++||||++||+|++|++++++ |++ ++| |+|++++||+|++|++++|||..
T Consensus 342 ~~~GNt~sAsi~~~L~~~~~~----g~~~~~G---d~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 342 ARFGNMLSVSLIFVLETMVQQ----AESAKAI---STGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp HHHCBCTHHHHHHHHHHHHHS----CSSSSSS---EEEEEEEEETTTEEEEEEEEECC
T ss_pred HhhCCchHhHHHHHHHHHHhc----CccCCCC---CeEEEEEeccchhhhhhheeecc
Confidence 999999999999999999998 888 599 99999999999999999999964
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-54 Score=417.49 Aligned_cols=317 Identities=19% Similarity=0.224 Sum_probs=263.0
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+.+... +. ..+|+.+++||++||++.+++.
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~~-~~------~~~~i~~rtgi~~r~~~~~~~~------------------- 64 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQGI-ET------SDEWIVARTGIHARYFAEPDVT------------------- 64 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC---C-CC------CHHHHHHHHCCSEEEECCTTCC-------------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccccC-CC------CHHHhHHhcCceEEEEcCCCCC-------------------
Confidence 699999999999999999999987522111 10 1378999999999999977663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
..+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+++||++.... +++++++|+|++.||.+|
T Consensus 65 ------~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~-~~~v~~~C~s~~~al~~A 137 (333)
T 4dfe_A 65 ------TSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGA-AFDVQAVCSGFAYAVATA 137 (333)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCE-EEEEECGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCc-EEEeCcccHHHHHHHHHH
Confidence 899999999999999999999999999999998 888999999999999954443 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..+|++|+.++|||+++|.+|..+ ++.+ +.+.++|||||+|+||++.+. .++. .+.+...+. ...|.
T Consensus 138 ~~~i~~g~~~~vLvvg~e~~s~~~-~~~d-----~~~~~lfGDGA~A~vl~~~~~-~~i~--~~~~~~~g~~~~~~~~~~ 208 (333)
T 4dfe_A 138 DSFIRSGQHRTALVIGAETFSRIL-DFKD-----RTTCVLFGDGAGAVILQASDE-PGVL--ASALHADGSHSNILCTPG 208 (333)
T ss_dssp HHHHHTTSCSEEEEEEEEEGGGGC-CTTC-----TTTTTTBCEEEEEEEEEEESS-CSEE--EEEEEECGGGGGGEEBCE
T ss_pred HHHHHcCCCCEEEEEEeecccccc-Cccc-----ccceeeeccccEEEEEEEcCC-CCeE--EEEEEEccCCcCeEEECC
Confidence 999999999999999999999743 4443 235789999999999998765 3221 123332221 11121
Q ss_pred CCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 246 TENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
.. ..+.+...++..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+..+
T Consensus 209 ~~--~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~~~~~~- 284 (333)
T 4dfe_A 209 NV--NGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSA-EQIDWLIPHQANIRIMQSTCRKLGLPQERMIVT- 284 (333)
T ss_dssp EE--ETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC-
T ss_pred CC--CCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh-
Confidence 10 00111223333344788999999999999999999999996 999 99999999999999999999999999875
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 285 --l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 333 (333)
T 4dfe_A 285 --VGEHGNTSAASIPLALDVAVRD----GRIKRG---QNVLIEGVGGGFTWGASVIRY 333 (333)
T ss_dssp --HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred --HHhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 9999999999999999999998 899999 999999999999999999998
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-54 Score=418.95 Aligned_cols=315 Identities=17% Similarity=0.188 Sum_probs=260.9
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.+++.
T Consensus 25 ~~~I~~~g~~~P~~~v~~~~l~~~~---~~~---------~~~i~~~tGi~~R~~a~~~~~------------------- 73 (359)
T 3h78_A 25 NPILAGLGFSLPKRQVSNHDLVGRI---NTS---------DEFIVERTGVRTRYHVEPEQA------------------- 73 (359)
T ss_dssp CCEEEEEEEECCSEEEEHHHHTTTS---SCC---------HHHHHHHHCCCEEEECCTTCC-------------------
T ss_pred CcEEEEEEEECCCceEcHHHHHHHh---CCC---------HHHHHHhcCceEEEEcCCCCC-------------------
Confidence 6999999999999999999998764 211 378999999999999977663
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+++||+++.+ +++++++|+|++.||.+|
T Consensus 74 ------~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~Al~~A 145 (359)
T 3h78_A 74 ------VSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIP--VLDIRAQASGLLYGLQMA 145 (359)
T ss_dssp ------THHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCc--EEEECCHhHHHHHHHHHH
Confidence 899999999999999999999999999999998 88899999999999998654 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC-CCccccceeEEEeeee----eecC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD-ISNHERTLFQVLSCTQ----TTIP 244 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~-~~~~~~~~~~~~~~~~----~~~p 244 (390)
..+|++|..++|||+++|.+|..+ ++.|. .+.+..+|||||+|+||++++. ..++. .+.+.+.+. ...|
T Consensus 146 ~~~i~sG~~~~vLvvg~e~~S~~~-~~~d~---~~~t~~lfGDGAaA~vl~~~~~~~~~i~--~~~~~s~g~~~~~~~~~ 219 (359)
T 3h78_A 146 RGQILAGLARHVLVVCGEVLSKRM-DCSDR---GRNLSILLGDGAGAVVVSAGESLEDGLL--DLRLGADGNYFDLLMTA 219 (359)
T ss_dssp HHHHHTTSCSEEEEEEEEECGGGC-CCSTT---THHHHTTBCEEEEEEEEECCSCSSSEEE--EEEEEECGGGGGGEEBC
T ss_pred HHHHHCCCcCEEEEEEEchhcccC-Ccccc---cccccceecceeEEEEEEecCCCCCceE--EEEEEEccCccceEEeC
Confidence 999999999999999999999743 45431 1346789999999999998763 12211 123332222 1223
Q ss_pred C--CCC-ce---eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 245 D--TEN-YI---TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 245 ~--~~~-~~---~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
. ... .. .+.....++..+.++++|+++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+
T Consensus 220 ~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~Hq~n~~i~~~~~~~lgl~~ 298 (359)
T 3h78_A 220 APGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTL-DDIDHVICHQPNLRILDAVQEQLGIPQ 298 (359)
T ss_dssp CSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCG
T ss_pred CCCCccCCccccccccccCCceEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCcCH
Confidence 2 110 00 0000112222334788999999999999999999999996 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
+|+..+ +++||||++||+|++|++++++ +++| |+|++++||+|++|++++|||+
T Consensus 299 ek~~~~---l~~~GNt~sAsi~l~L~~~~~~------l~~G---d~vll~~fG~G~t~~~~ll~~~ 352 (359)
T 3h78_A 299 HKFAVT---VDRLGNMASASTPVTLAMFWPD------IQPG---QRVLVLTYGSGATWGAALYRKP 352 (359)
T ss_dssp GGBCCC---HHHHCBCGGGHHHHHHHHHGGG------SCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred HHhhhh---hhcccchHHHHHHHHHHHHHHh------CCCC---CEEEEEEEchhhhheeeeEEeh
Confidence 999875 9999999999999999999874 8899 9999999999999999999994
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-54 Score=410.38 Aligned_cols=309 Identities=19% Similarity=0.243 Sum_probs=257.1
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+ ..+ .+||.+++||++||++.+++
T Consensus 4 ~~~I~~~g~~lP~~~v~n~~~~~~~---~~~---------~~~i~~~~Gi~~R~~a~~~e-------------------- 51 (321)
T 3il6_A 4 YARISCTSRYVPENCVTNHQLSEMM---DTS---------AAWIHSRTGISERRIVTQEN-------------------- 51 (321)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHT---TSC---------HHHHHHHHSCSEEECCSSCC--------------------
T ss_pred cEEEEEEEEECCCcEEcHHHHHHHh---CCC---------hhhhhhhcCceEEEECCCCC--------------------
Confidence 6899999999999999999998864 222 37899999999999997654
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+.+|+++||+++|++++|||+||++++++ +..|+++.+|+++||+++.+ +++++++|+|++.||.+|
T Consensus 52 ------~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~--~~~v~~aC~s~~~al~~A 123 (321)
T 3il6_A 52 ------TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGATEAF--AFDISAACSGFVYALSMA 123 (321)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCTTCE--EEEECCGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCCCce--EEEeCcccHHHHHHHHHH
Confidence 789999999999999999999999999999998 88999999999999998744 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..++++|..++|||+++|.+|. +.++.| +.+..+|||||+|+||++++. .++ ..+.+.+.+. ...|.
T Consensus 124 ~~~i~~g~~~~vLvvg~e~~s~-~~~~~d-----r~~~~lfGDGA~A~vl~~~~~-~~i--~~~~~~s~~~~~~~~~~~~ 194 (321)
T 3il6_A 124 EKLVLSGRYQTGLVIGGETFSK-MLDWTD-----RSTAVLFGDGAAGVLIEAAET-PHF--LNEKLQADGQRWTALTSGY 194 (321)
T ss_dssp HHHHHTSSCCCEEEEEEECGGG-GSCTTC-----TTTGGGBCCEEEEEEEEEESS-CCE--EEEEEEECGGGGGGEECCC
T ss_pred HHHHHCCCCCEEEEEEEccccc-cCCccc-----cccceeeccccEEEEEEEcCC-CCE--EEEEEEEcCCCCCeEEeCC
Confidence 9999999999999999999996 445544 235789999999999998765 221 1123333221 12233
Q ss_pred CCCceeeEee---cceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccch
Q 036844 246 TENYITGQLK---EMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLW 321 (390)
Q Consensus 246 ~~~~~~~~~~---~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~ 321 (390)
......|... .+++..+.++++|+++.+.++++++++|+ + +|| +|++||+|+++++.+++.||+|++|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~-----~-~did~~v~Hq~~~~i~~~~~~~lgl~~ek~~ 268 (321)
T 3il6_A 195 TINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSLVT-----D-ETVDYLLLHQANVRIIDKIARKTKISREKFL 268 (321)
T ss_dssp CCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTTCC-----G-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBC
T ss_pred CCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHHcC-----c-ccCCEEEEcCCCHHHHHHHHHHcCcCHHHhh
Confidence 2222222211 12332333788999999999999999998 5 899 999999999999999999999999998
Q ss_pred hHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 322 ASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 322 ~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+ +++||||+|||+|++|++++++ |++++| +.|+|++++||+|++|++++||+
T Consensus 269 ~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G-~~d~vll~~fG~G~t~~~~~l~v 321 (321)
T 3il6_A 269 TN---MDKYGNTSAASIPILLDEAVEN----GTLILG-SQQRVVLTGFGGGLTWGSLLLTL 321 (321)
T ss_dssp CC---GGGTCBCGGGHHHHHHHHHHHT----TSSCTT-SCCEEEEEEEETTTEEEEEEEEC
T ss_pred hh---HhhcccHHHHHHHHHHHHHHHh----CCCCCC-CCCEEEEEEEehhheeEEEEEEC
Confidence 74 9999999999999999999998 889987 12699999999999999999984
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-53 Score=409.89 Aligned_cols=323 Identities=17% Similarity=0.165 Sum_probs=259.6
Q ss_pred CCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHH
Q 036844 10 PAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDAR 89 (390)
Q Consensus 10 ~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 89 (390)
++++|.|+|+|+|+++++|+|+.+.+...... .....+||.+++||++||++.+++
T Consensus 11 ~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~-----~~~~~~~i~~~tGi~~R~~~~~~~------------------- 66 (345)
T 3s21_A 11 QNVSIAGLAHIDAPHTLTSKEINERLQPTYDR-----LGIKTDVLGDVAGIHARRLWDQDV------------------- 66 (345)
T ss_dssp SSEEEEEEEEEECSEEEEHHHHHHHHHHHHHH-----HTCCCCHHHHTTCCSEEEECSSCC-------------------
T ss_pred cceEEEEEEEeCCCcEEcHHHHHHHHhhcccc-----cCCCHHHHHHhhCceeEEECCCCC-------------------
Confidence 47999999999999999999998876321100 000126899999999999997766
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 036844 90 QAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRL 168 (390)
Q Consensus 90 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~ 168 (390)
++.+|+.+|+++||+++|+++++||+||++++++ +..|+++.+|+++||++.... +++++++|+|++.||.+
T Consensus 67 ------~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~s~~~al~~ 139 (345)
T 3s21_A 67 ------QASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCM-TFDVANACLAFINGMDI 139 (345)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCE-EEECCCGGGHHHHHHHH
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCce-EEeECCcCHHHHHHHHH
Confidence 3899999999999999999999999999999998 889999999999999985433 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCC------cc-ch---hhhhhhhhhccCcEEEEeccCCCCCccccceeEEEee
Q 036844 169 AKDIAENNPGARVLVVCSDIRVLDFHEPS------ET-HL---DVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC 238 (390)
Q Consensus 169 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~------~~-~~---~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 238 (390)
|..+|++|..++|||+++|.+|..+ ++. +. +. +......+|||||+|+||++.+...+ ..++.+.
T Consensus 140 A~~~i~~g~~~~vLvvg~e~~s~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~GdGA~A~vl~~~~~~~~----~~~i~~~ 214 (345)
T 3s21_A 140 AARMLERGEIDYALVVDGETANLVY-EKTLERMTSPDVTEEEFRNELAALTLGCGAAAMVMARSELVPD----APRYKGG 214 (345)
T ss_dssp HHHHHHHTSCSEEEEEEEECCHHHH-HHHHHHHTCTTCCHHHHHHHHGGGGBCCEEEEEEEEEGGGSTT----SCEEEEE
T ss_pred HHHHHHCCCCCEEEEEEEcccchhh-ccccccccCCccchhhhhhhccceeeccceeEEEEecCCCCCC----Ccceeee
Confidence 9999999999999999999998532 111 10 01 11234689999999999998764111 1234433
Q ss_pred eeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCc
Q 036844 239 TQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGK 317 (390)
Q Consensus 239 ~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~ 317 (390)
.....+...+.+.+. .++ ..+.++++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|+
T Consensus 215 ~~~~~~~~~~~~~~~--~~~-~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~-~did~~v~Hq~~~~i~~~~~~~lgl~~ 290 (345)
T 3s21_A 215 VTRSATEWNKLCRGN--LDR-MVTDTRLLLIEGIKLAQKTFVAAKQVLGWAV-EELDQFVIHQVSRPHTAAFVKSFGIDP 290 (345)
T ss_dssp EEEECGGGTTC--------------CHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSCHHHHHHHHHHHTCCG
T ss_pred ccccCcchhhhcccc--Ccc-eEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCcCH
Confidence 222222222211111 111 1223688999999999999999999999996 999 99999999999999999999999
Q ss_pred ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 318 DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 318 e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+|++.+ +++||||++||+|++|++++++ |++++| |+|++++||+|++|++++|||
T Consensus 291 ek~~~~---l~~~GNt~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~~l~w 345 (345)
T 3s21_A 291 AKVMTI---FGEHGNIGPASVPIVLSKLKEL----GRLKKG---DRIALLGIGSGLNCSMAEVVW 345 (345)
T ss_dssp GGBCCC---HHHHCBCGGGHHHHHHHHHHHH----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHceee---HhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhhhheEEEEEC
Confidence 999864 8999999999999999999998 999999 999999999999999999998
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-51 Score=443.63 Aligned_cols=373 Identities=60% Similarity=1.005 Sum_probs=312.4
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+.+...++..+.+++...++.+++||++|+++.+++.....++...+..|.+..|.
T Consensus 603 ~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~~~~~~~~~~~~~~~r~ 682 (979)
T 3tsy_A 603 PATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQ 682 (979)
T ss_dssp CEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHHCHHHHSSSSCCHHHHH
T ss_pred CceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhcCcccccccCCCHHHHH
Confidence 69999999999999999999999865455555445566667889999999999999887754444444556678999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
+.+.++..+|+.+|+++||+++|++++|||+||++|++++..|+++++|+++||+++...++++++++|+|+++||.+|.
T Consensus 683 ~~~~~~~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~ 762 (979)
T 3tsy_A 683 EIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAK 762 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHH
Confidence 99999999999999999999999999999999999977788999999999999998754337999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.+|++|..++||||++|.++..+.+......+.....++|||||+|+||++.+. .+.....+.....+....+......
T Consensus 763 ~~i~sG~~~~vLvvg~e~~~~~~~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (979)
T 3tsy_A 763 DLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPD-ISIERPLFQLVSAAQTFIPNSAGAI 841 (979)
T ss_dssp HHHHTSTTCEEEEEEEECTTTTCCCCCSSCHHHHHHHHHBCCEEEEEEEESSCC-SSSCCCCEEEEEEEEEECTTCTTSE
T ss_pred HHHHhCCCCEEEEEEEEecchheeCCCccCHHHHhhhhhccCceEEEEEecCCC-ccccCcceEEEeeeeEEecCchhhe
Confidence 999999999999999999876554433333444556789999999999998765 3322334555555555566665556
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.+.....+..++.++++++++.+.+.++++++|+++|+++ +|| +|++||+|.++++.++++||++.+|+..+|.++++
T Consensus 842 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~al~~agl~~-~did~~~~Hq~~~~i~~~~~~~lgl~~~k~~~~~~~l~~ 920 (979)
T 3tsy_A 842 AGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISD-WNSLFWIAHPGGPAILDAVEAKLNLDKKKLEATRHVLSE 920 (979)
T ss_dssp EEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHHHHHTCCTTTTHHHHHHHHH
T ss_pred EEEEecCceEEEEchHHHHHHHHHHHHHHHHHHhhcCCCC-cccceEEECCCChHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 6666667777778899999999999999999999999997 999 99999999999999999999999999998888999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
||||+|||+|++|++++++..+.++++.|.|.|++++++||+|++|++++|||.+.
T Consensus 921 ~GNtssasi~~~L~~~~~~~~~G~~v~~g~~~~~~ll~~~G~G~t~~~~~l~~~~~ 976 (979)
T 3tsy_A 921 YGNMSSACVLFILDEMRKKSLKGERATTGEGLDWGVLFGFGPGLTIETVVLHSIPM 976 (979)
T ss_dssp HCBCTTHHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEECGGGEEEEEEEECCBC
T ss_pred cCCcchhhHHHHHHHHHhhhcccccccCCCCcceeEEEEeCCchHHHHHHHHhccc
Confidence 99999999999999988752221245555445666999999999999999999764
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=392.24 Aligned_cols=318 Identities=16% Similarity=0.115 Sum_probs=243.9
Q ss_pred CCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHH
Q 036844 10 PAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDAR 89 (390)
Q Consensus 10 ~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 89 (390)
++++|.|+|+|+|+++++|+++... +. . .++.+++||++||++.+++.
T Consensus 4 ~~v~I~g~g~ylP~~~~~~~~~~~~---~~--~---------~~~~~~tGi~~r~~a~~~e~------------------ 51 (357)
T 3s3l_A 4 ENLFVSGVAAWLPPLSTAQDAVMAG---LL--D---------PARSKLRGIESVTVASDAEE------------------ 51 (357)
T ss_dssp SSCEEEEEEEECCCEEEHHHHHHTT---SS--C---------HHHHHHHCCCEEECCCSSGG------------------
T ss_pred CceEEEEEEEECCCCCCHHHHHHhc---CC--c---------HHHHHHcCceEEEecCCCCC------------------
Confidence 4799999999999987777665431 11 1 22358899999999865430
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHH
Q 036844 90 QAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIR 167 (390)
Q Consensus 90 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~ 167 (390)
.++.+|+.+|+++||+++|++++|||+||+++++. ...++++.+|+.+||+++.+ +++++++|+|++.||.
T Consensus 52 -----~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~~~~--~~~v~~aC~~~~~al~ 124 (357)
T 3s3l_A 52 -----DAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGRHVP--AFGLAQRCNGGMGAIE 124 (357)
T ss_dssp -----GSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCSSSC--EEEEECGGGHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCCCCc--EEEEcCccHHHHHHHH
Confidence 02899999999999999999999999999999852 22346799999999997654 8999999999999999
Q ss_pred HHHHHHHcCCCC--eEEEEEeecccc-ccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee--e
Q 036844 168 LAKDIAENNPGA--RVLVVCSDIRVL-DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT--T 242 (390)
Q Consensus 168 ~A~~ll~~g~~~--~vLvv~~d~~s~-~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~--~ 242 (390)
+|..+|++|..+ +||||++|.+|. .+.++++ . +..+|||||+|+||++++...++ ..+.+.+.+.. .
T Consensus 125 ~A~~~i~sg~~~~~~vLvvg~e~~s~~~~~~~~~-----~-~~~lfGDGA~A~vl~~~~~~~~i--~~~~~~s~g~~~~~ 196 (357)
T 3s3l_A 125 LAGAYLGSGIGAGHAALLTTGDRFAGPRIDRWNS-----V-DVTMYGDGAAALVLSTRDGFARV--LSTATGVDNSLEIL 196 (357)
T ss_dssp HHHHHHHTTSSSSSEEEEEEEECCCTTTCCTTTS-----S-SSCCBCCEEEEEEEESSCCSEEE--EEEEEEECGGGGGG
T ss_pred HHHHHHHcCCCCCCEEEEEEEecccccccccccc-----c-CCcccccccEEEEEecCCCCCeE--EEEEEEEccChhhh
Confidence 999999999988 999999999994 3333332 1 47899999999999987651111 11223322221 1
Q ss_pred cCCCCCcee------eEeecce---eEEEeCCcc-hH-HHHHhHHHHHHHhhccCCCCCCCce-eEE-EcCCCHHHHHHH
Q 036844 243 IPDTENYIT------GQLKEMG---IYGHLSLDV-PV-AIGKYIGKCLSNAMSPIGISDWNSL-FYV-LHPGGDGLIDQV 309 (390)
Q Consensus 243 ~p~~~~~~~------~~~~~~g---~~~~~~~~v-~~-~~~~~~~~~i~~~L~~~gl~~~~di-~~i-~h~~~~~~~~~~ 309 (390)
.+....... ..+.+++ +..+.+.++ ++ ++.+.++++++++|+++|+++ +|| +|+ +||+|.+ ++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~~hq~~~~-~~~~ 274 (357)
T 3s3l_A 197 ARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDLTHRYIDLLVAAKTQALEDAGTAI-EDIAHAVIPVSRRGT-GHEL 274 (357)
T ss_dssp GTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEECCSCCCCS-SCCH
T ss_pred cccCCCCCCCccCcCCccccccchhhhhcccchhhhHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHH-HHHH
Confidence 111100000 0011111 000112222 44 788899999999999999996 999 998 4999999 9999
Q ss_pred HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 310 EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 310 ~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+++||+|++|+..+ +.++||||++||+|++|++++++ |++++| |+|+|++||+|++|++++|||...
T Consensus 275 ~~~lgl~~ek~~~~--~~~~~GNt~aAsipl~L~~~~~~----g~l~~G---d~vll~~fG~G~t~~a~ll~~~~~ 341 (357)
T 3s3l_A 275 HDLLGLPDERTSWA--YGRTTGHVGAGDQYAGLAHLVEN----ALVQPG---DRVLLFGGGAGYTCTAAVVEILRM 341 (357)
T ss_dssp HHHHTSCGGGBTHH--HHHHHCBCTTCHHHHHHHHHHHT----TCCCTT---CEEEEECCBTTTEEEEEEEEECCC
T ss_pred HHHcCCCHHHhHHH--hccccccchHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeeEEeccC
Confidence 99999999999864 56899999999999999999998 999999 999999999999999999999754
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-49 Score=381.45 Aligned_cols=317 Identities=20% Similarity=0.201 Sum_probs=261.2
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.|+|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++
T Consensus 11 ~~~I~gig~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~~-------------------- 58 (339)
T 1mzj_A 11 FSRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDE-------------------- 58 (339)
T ss_dssp EEEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTC--------------------
T ss_pred ceEEEEEEEeCCCccccHHHHHHHh---CCC---------HHHHHHhcCceEEEEeCCCC--------------------
Confidence 5899999999999999999998653 111 36889999999999986655
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
...+|+.+|+++||+++|+++++||.||++++++ +..|+++.+|+.+||++..+ +++++++|+|++.||..|
T Consensus 59 -----~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A 131 (339)
T 1mzj_A 59 -----TIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIA 131 (339)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCCCcc--EEEccccchHHHHHHHHH
Confidence 2899999999999999999999999999999988 77899999999999998644 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eec--
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTI-- 243 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~-- 243 (390)
..+|++|..++|||+++|.++.. .++.+ +...++|||||+|+||++.+. .++. ...+.+.+. .+.
T Consensus 132 ~~~i~~G~~~~vLv~g~e~~s~~-~~~~d-----~~~~~~~GdGA~A~vL~~~~~-~~i~--~~~~~~~g~~~~~~~~~g 202 (339)
T 1mzj_A 132 ADAVESGGSRHVLVVATERMTDV-IDLAD-----RSLSFLFGDGAGAAVVGPSDV-PGIG--PVVRGIDGTGLGSLHMSS 202 (339)
T ss_dssp HHHHHHSSCSCEEEEEEEEGGGG-SCSSC-----TTTTTTBCEEEEEEEEEEESS-CCBC--CCEEEECGGGGGGEEESC
T ss_pred HHHHHCCCCCEEEEEEEcccccc-cCccc-----cccceEeccCceEEEEEecCC-CCeE--EEEEEEcCCCCCeEEecC
Confidence 99999999999999999998863 34432 235789999999999998654 2221 112222221 111
Q ss_pred --CCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcc-c
Q 036844 244 --PDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKD-K 319 (390)
Q Consensus 244 --p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e-~ 319 (390)
|...+.+. ...++..+.++++|+++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+++.||++.+ +
T Consensus 203 ~~p~~~~~~~---~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~ 278 (339)
T 1mzj_A 203 SWDQYVEDPS---VGRPALVMDGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVV 278 (339)
T ss_dssp CHHHHTTCSS---SCSCCEEECHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSE
T ss_pred CCCCcccccc---cccceEEeeCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCccce
Confidence 21111000 012222334788999999999999999999999997 999 999999999999999999999999 9
Q ss_pred chhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecCCCCC
Q 036844 320 LWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPIDSTN 389 (390)
Q Consensus 320 ~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~~~~~ 389 (390)
+..+ +++|||+++||++++|++++++ |++++| |++++++||+|++|++++|||....+||
T Consensus 279 ~~~~---~~~~Gn~~sAs~~~~L~~~~~~----g~~~~G---~~vll~~~G~G~t~~~~~l~~~~~p~~~ 338 (339)
T 1mzj_A 279 VSRD---AEDTGNTSSASVALALDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDPPSTP 338 (339)
T ss_dssp ECCT---HHHHCBCTTHHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCCCC--
T ss_pred eeeh---hhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeCCCCCCC
Confidence 8764 7999999999999999999998 889999 9999999999999999999998777776
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=375.41 Aligned_cols=316 Identities=19% Similarity=0.194 Sum_probs=256.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+. .+ .+||.+++||++||++.+ +
T Consensus 5 ~~~I~g~g~~~P~~~~~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~~-~-------------------- 51 (331)
T 2x3e_A 5 AAVVCGLGSYLPEAVLSNDMLAAELD---TS---------DAWISSRTGVRQRHIAGD-L-------------------- 51 (331)
T ss_dssp EEEEEEEEEECCSCEEEHHHHHHHTT---CC---------HHHHHHHHCCCEEECCTT-C--------------------
T ss_pred eeEEEEEEEECCCcEecHHHHHHHhC---CC---------HHHHHHhhCceEEEecCC-C--------------------
Confidence 47999999999999999999987642 11 368999999999999865 3
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
...+|+.+|+++||+++|+ ++||.||++++++ +..|+++.+|+.+||+++.+ +++++++|+|++.||..|
T Consensus 52 -----~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~--~~~v~~aCas~~~Al~~A 122 (331)
T 2x3e_A 52 -----GSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLVGAL--AFDLSAAATGFVYGLASV 122 (331)
T ss_dssp -----CHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCTTSE--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCc--EEEEcCcChHHHHHHHHH
Confidence 2899999999999999999 8999999999988 67899999999999998643 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCC--CCCccccceeEEEeeee----eec
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGP--DISNHERTLFQVLSCTQ----TTI 243 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~--~~~~~~~~~~~~~~~~~----~~~ 243 (390)
..+|++|..++|||+++|.++. +.++.| +...++|||||+|+||++.+ ...++. ...+...+. ...
T Consensus 123 ~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~GdGA~A~vL~~~~~a~~~~i~--~~~~~~dg~~~~~~~~ 194 (331)
T 2x3e_A 123 GSLISAGLADSALLVGVDTFSH-TLDPAD-----RSTRALFGDGAGAVVLRAGDAEEEGALL--AFDLGSDGHQFDLLMT 194 (331)
T ss_dssp HHHHHTTSCSEEEEEEEECGGG-GSCTTC-----HHHHHHBCCEEEEEEEEEECTTSTTBEE--EEEEEECGGGTTSEEE
T ss_pred HHHHHcCCCCEEEEEEeecccc-CCCccc-----cccceeeccccEEEEEEecCCCCCCceE--EEEEEEcCCCCCeEEe
Confidence 9999999999999999999886 334433 33578999999999999765 211110 111222211 111
Q ss_pred CCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchh
Q 036844 244 PDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWA 322 (390)
Q Consensus 244 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~ 322 (390)
|.............++..+.++++|+++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+++.||++.+|++.
T Consensus 195 p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~ 273 (331)
T 2x3e_A 195 PAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQA-SDLHHLVPHQANTRILAAVADQLDLPVERVVS 273 (331)
T ss_dssp ECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCCCHHHHHHHHHHHTCCGGGBCC
T ss_pred cCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHhh
Confidence 21110000000011223344788999999999999999999999997 999 9999999999999999999999999986
Q ss_pred HHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecCCCCC
Q 036844 323 SRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPIDSTN 389 (390)
Q Consensus 323 ~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~~~~~ 389 (390)
+ +.+|||+++||+|++|++++++ +++++| |++++++||+|++|++++|||. ++.|
T Consensus 274 ~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~~l~~~--~~~~ 328 (331)
T 2x3e_A 274 N---IAEVGNTVAASIPLALAHGLRQ----GILRDG---GNMVLTGFGAGLTWGSVALRWP--KIVP 328 (331)
T ss_dssp C---HHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEECC--CCCC
T ss_pred h---HhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEeHHhhheeeEEEEC--Cccc
Confidence 5 7999999999999999999998 889999 9999999999999999999994 4444
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=366.69 Aligned_cols=310 Identities=22% Similarity=0.282 Sum_probs=256.2
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+++++||++||++.+++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~-------------------- 49 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNE-------------------- 49 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTC--------------------
T ss_pred CcEEEEEEEeCCCceecHHHHHHHh---CCC---------HHHHHHHhCceEEEecCCCC--------------------
Confidence 3789999999999999999998653 111 36888999999999986655
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
...+|+.+|+++||+++|+++++||.|+++++++ +..|..+.+|+..||+++.+ +++++++|+|++.||..|
T Consensus 50 -----~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A 122 (317)
T 1hnj_A 50 -----TVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVA 122 (317)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCe--EEeeCcccHHHHHHHHHH
Confidence 2899999999999999999999999999999988 77899999999999998644 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPD 245 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~ 245 (390)
..+|++|..++|||+++|.++..+ +|++ +...++|||||+|+||++.+. .++. ...+.+.+. .+.|.
T Consensus 123 ~~~i~~g~~~~vlv~g~e~~s~~~-~~~d-----~~~~~~~GdGA~A~vL~~~~~-~~i~--~~~~~~~g~~~~~~~~~~ 193 (317)
T 1hnj_A 123 DQYVKSGAVKYALVVGSDVLARTC-DPTD-----RGTIIIFGDGAGAAVLAASEE-PGII--STHLHADGSYGELLTLPN 193 (317)
T ss_dssp HHHHHTTSCSEEEEEEEECHHHHS-CTTC-----HHHHTTBCCEEEEEEEEEESS-CSEE--EEEEEECGGGGGGEECCC
T ss_pred HHHHHCCCCCEEEEEEechhcccC-Cchh-----cccceeeccccEEEEEEecCC-Ccee--eEEEEEcCCCCCeEEECC
Confidence 999999999999999999988633 4432 335789999999999998654 2210 111111211 12232
Q ss_pred CCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHH
Q 036844 246 TENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASR 324 (390)
Q Consensus 246 ~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~ 324 (390)
..... ....++....++++|+++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.+++..
T Consensus 194 -~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~-~did~v~~H~~~~~~~d~i~~~lg~~~~~~~~-- 267 (317)
T 1hnj_A 194 -ADRVN--PENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVV-- 267 (317)
T ss_dssp -CCSSC--TTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCC--
T ss_pred -CCCCC--CCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHhHh--
Confidence 10000 0011222233678899999999999999999999997 999 9999999999999999999999999875
Q ss_pred HHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 325 YVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 325 ~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++.+|||+++||++++|++++++ |++++| |++++++||+|++|++++|||
T Consensus 268 -~~~~~Gn~~~As~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~t~~~~~l~~ 317 (317)
T 1hnj_A 268 -TLDRHGNTSAASVPCALDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 317 (317)
T ss_dssp -CHHHHCBCGGGHHHHHHHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred -hHhhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhheeEEEEEEC
Confidence 48999999999999999999998 889999 999999999999999999997
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-46 Score=358.53 Aligned_cols=309 Identities=22% Similarity=0.280 Sum_probs=254.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+++++||++|+++.+++
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~-------------------- 49 (313)
T 1zow_A 2 NVGIKGFGAYAPEKIIDNAYFEQFL---DTS---------DEWISKMTGIKERHWADDDQ-------------------- 49 (313)
T ss_dssp CEEEEEEEEECCSCEEEGGGGGGTS---SCC---------HHHHHHHHCCSEEECCCTTC--------------------
T ss_pred ceEEEEEEEECCCccccHHHHHHhc---CCC---------HHHHHHhhCceEEEecCCCC--------------------
Confidence 3789999999999999999998653 111 26889999999999987665
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
...+|+.+|+++||+++|+++++||.|+++++++ +..|+++.+|+..||++..+ +++++++|+|++.||..|
T Consensus 50 -----~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~aCas~~~al~~A 122 (313)
T 1zow_A 50 -----DTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVA--SMDQLAACSGFMYSMITA 122 (313)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCCSCC--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EEEECCcCHHHHHHHHHH
Confidence 2899999999999999999999999999999988 78899999999999998644 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..+|++|..++|||+++|.++. +.+|.+ +...++|||||+|+||++.+...++ ....+.+.+. ..+.
T Consensus 123 ~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~gdGa~A~vl~~~~~~~~i--~~~~~~~~g~-----~~~~ 189 (313)
T 1zow_A 123 KQYVQSGDYHNILVVGADKLSK-ITDLTD-----RSTAVLFGDGAGAVIIGEVSEGRGI--ISYEMGSDGT-----GGKH 189 (313)
T ss_dssp HHHHHTTSCSCEEEEEEEEGGG-TCCTTC-----HHHHTTBCEEEEEEEEEECSTTCEE--EEEEEEECGG-----GGGG
T ss_pred HHHHHCCCCCEEEEEEEccccc-ccCccc-----ccceeeeccceEEEEEEecCCCCce--eEEEEEEcCC-----CcCe
Confidence 9999999999999999999886 334543 2357999999999999987641111 0111222111 1111
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
+.... .+......++++++...+.+.++++++|+++|+++ +|| +|++||.+.++++.+.+.||++.++++.+ +.
T Consensus 190 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~~---~~ 264 (313)
T 1zow_A 190 LYLDK-DTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTS-DDIDLFIPHQANIRIMESARERLGISKDKMSVS---VN 264 (313)
T ss_dssp EEECT-TTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCGGGBCCC---HH
T ss_pred EEecC-CCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHHHHh---Hh
Confidence 11100 00111123577888888899999999999999997 999 99999999999999999999999998864 89
Q ss_pred hcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEee
Q 036844 329 EYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 329 ~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
+|||+++|+++++|.+++++ +++++| |++++++||+|++|++++|||.
T Consensus 265 ~~Gh~~~as~~~~L~~~~~~----~~~~~g---~~vl~~~~G~G~t~~~~~l~~~ 312 (313)
T 1zow_A 265 KYGNTSAASIPLSIDQELKN----GKLKDD---DTIVLVGFGGGLTWGAMTIKWG 312 (313)
T ss_dssp HHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEECC
T ss_pred hhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 99999999999999999998 889999 9999999999999999999993
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-48 Score=376.65 Aligned_cols=307 Identities=15% Similarity=0.101 Sum_probs=251.4
Q ss_pred CCeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHH
Q 036844 10 PAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDAR 89 (390)
Q Consensus 10 ~~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~ 89 (390)
.+++|.++|+|+|+++++|+++++.++ .+ .+|+.+.+||++|+++.+++.
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~e~------------------ 55 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEARN---VD---------PGKFHIGIGQDQMAVNPISQD------------------ 55 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHTT---SC---------THHHHTTTCCCEEECCCTTCC------------------
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHhC---CC---------HHHHHHHhCceEEEECCCCCC------------------
Confidence 379999999999999999999988642 22 257788999999999987763
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHH
Q 036844 90 QAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRL 168 (390)
Q Consensus 90 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~ 168 (390)
+.+|+++|+++||++++ +++||+||++|+++ +..|+++.+|+++||+++... +++++++|+|++.||.+
T Consensus 56 -------~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~-~~dv~~aC~gg~~AL~~ 125 (388)
T 3v4n_A 56 -------IVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFAR-SFEIKEAXYGATAGLQL 125 (388)
T ss_dssp -------HHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESGGGHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCce-EeehhhhhhHHHHHHHH
Confidence 89999999999999997 99999999999999 789999999999999987443 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCC
Q 036844 169 AKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTEN 248 (390)
Q Consensus 169 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 248 (390)
|..++++|+.++||||++|.++..+ ++.+ ..+|||||+|+||++++. + ..+.....+. ..+
T Consensus 126 A~~~i~sg~~~~vLVvg~e~~s~~~-~~~~--------~~lfGDGA~A~ll~~~~~---i--l~~~~~~~~~-----~~~ 186 (388)
T 3v4n_A 126 AKNHVALHPDKKVLVVAADIAKYGL-NSGG--------EPTQGAGAVAMLVSSEPR---I--LALKEDNVML-----TQD 186 (388)
T ss_dssp HHHHHHHCTTCEEEEEEEEEECCCT-TCTT--------GGGCEEEEEEEEEEESCS---S--EEECSCCEEE-----ECC
T ss_pred HHHHHhcCCCCEEEEEEehhhcccC-CCCC--------CCccccceeEEEeecCCC---c--eEEecccccc-----chh
Confidence 9999999999999999999998633 3321 488999999999999764 1 0111111111 111
Q ss_pred cee-eEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCC--------HHHH----HHHHHHcC
Q 036844 249 YIT-GQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGG--------DGLI----DQVEKNLG 314 (390)
Q Consensus 249 ~~~-~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~--------~~~~----~~~~~~lg 314 (390)
.+. |......+..+.++.+++.+.+.++++++++|+++|+++ +|| +|++||++ .+++ +.+.+.|+
T Consensus 187 ~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~-~did~~v~Hqp~~k~~~ka~~ril~~~~~~~~~~l~ 265 (388)
T 3v4n_A 187 IYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDF-ADYDALAFHIPYTKMGKKALLAKISDQTEAEQERIL 265 (388)
T ss_dssp CCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCG-GGCSEEEECCSSHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred ccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCH-HHCCEEEeCCCcchHHHHHHHHHHhcccHHHHHHhC
Confidence 121 221111222334677888999999999999999999996 999 99999954 5556 77889999
Q ss_pred CCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 315 LGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 315 i~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
++.+++.. ++++||||++||+|++|++++++. |++++| |+|++++||+|+++..+.+++.+.
T Consensus 266 ~~~e~~~~---~~~~~GN~~sASi~l~L~~~l~~~---g~~~~G---d~ill~s~GsG~~ae~~~~~v~~~ 327 (388)
T 3v4n_A 266 ARYEESII---YSRRVGNLYTGSLYLGLISLLENA---TTLTAG---NQIGLFSYGSGAVAEFFTGELVAG 327 (388)
T ss_dssp HHHHHHTT---TGGGTCCCGGGHHHHHHHHHHHHC---SSCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred CCHHHHhh---HHHhcCchHHHHHHHHHHHHHHhc---CcCCCC---CEEEEEEecCcceeEEEEEEEccC
Confidence 99999776 599999999999999999999851 568999 999999999999999999998753
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-46 Score=363.60 Aligned_cols=321 Identities=22% Similarity=0.247 Sum_probs=258.4
Q ss_pred CcccccCCCC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCcc
Q 036844 1 MTTVKSNQRP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMC 79 (390)
Q Consensus 1 ~~~~~~~~~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~ 79 (390)
|++.|....- +++|.++|+|+|+++++|+++.+.+ ..+ .+|+++++||++|+++.+++
T Consensus 1 ~~~~~~~~~m~~~~I~g~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~gi~~r~~~~~~~--------- 59 (335)
T 1u6e_A 1 MTEIATTSGARSVGLLSVGAYRPERVVTNDEICQHI---DSS---------DEWIYTRTGIKTRRFAADDE--------- 59 (335)
T ss_dssp CCCCCCCCCCSCEEEEEEEEECCSEEEEHHHHTTSS---SCC---------HHHHHHHHCCSEEEECCTTC---------
T ss_pred CCccccccCCCceEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCCceEeecCCCC---------
Confidence 5665554333 5899999999999999999998753 111 36889999999999987665
Q ss_pred CCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccc
Q 036844 80 CYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQG 158 (390)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~ 158 (390)
...+|+.+|+++||+++|+++++||.|+++++++ +..|+++.+|+.+||++..+ +++++++
T Consensus 60 ----------------~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~a 121 (335)
T 1u6e_A 60 ----------------SAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAKGIL--GFDLSAG 121 (335)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCTTSE--EEEEECG
T ss_pred ----------------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--Eeeeccc
Confidence 2899999999999999999999999999999988 88899999999999997544 8899999
Q ss_pred cchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEee
Q 036844 159 CYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC 238 (390)
Q Consensus 159 C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 238 (390)
|+|++.||..|..+|++|..++|||+++|.++. +.+|.+ +...++|||||+|+||++.+. .++. ...+...
T Consensus 122 C~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~-~~~~~d-----~~~~~~~gDGA~A~vl~~~~~-~~i~--~~~~~~~ 192 (335)
T 1u6e_A 122 AAGFGYALGAAADMIRGGGAATMLVVGTEKLSP-TIDMYD-----RGNCFIFADGAAAVVVGETPF-QGIG--PTVAGSD 192 (335)
T ss_dssp GGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG-GCCTTC-----TTTTTTBCEEEEEEEEEECSS-CCBC--CCEEEEC
T ss_pred cHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc-ccCccc-----cccceEeccccEEEEEEecCC-CCee--EEEEEEc
Confidence 999999999999999999999999999999986 334543 235789999999999998654 2211 1111111
Q ss_pred ee----eecCCCCCceeeEeecce--eEEEe-CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH
Q 036844 239 TQ----TTIPDTENYITGQLKEMG--IYGHL-SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE 310 (390)
Q Consensus 239 ~~----~~~p~~~~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~ 310 (390)
+. ...|... ..+...+.+ ..+.+ +++++++..+.+.++++++|+++|+++ +|| +|++||.+.++.+.+.
T Consensus 193 g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~dId~~~~H~~~~~~~~~~~ 269 (335)
T 1u6e_A 193 GEQADAIRQDIDW--ITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLV 269 (335)
T ss_dssp GGGGGGEEESSCH--HHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHH
T ss_pred CCcccceeecCCc--cCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHH
Confidence 11 1111100 000000000 11222 567788888889999999999999997 999 9999999999999999
Q ss_pred HHcCCCcc-cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 311 KNLGLGKD-KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 311 ~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.||++.+ ++..+ +++|||+++|++|++|++++++ +++++| |++|+++||+|++|++++|||
T Consensus 270 ~~lg~~~~~~~~~~---~~~~Gnt~sAs~~~~L~~~~~~----~~~~~g---~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 270 KNLQLRPDAVVAND---IEHTGNTSAASIPLAMAELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp HHHTCCTTCEECCT---HHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHcCCCchhhhhhh---hhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeEEEEEEe
Confidence 99999998 77664 8999999999999999999987 888999 999999999999999999999
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=355.93 Aligned_cols=314 Identities=19% Similarity=0.230 Sum_probs=255.1
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+++
T Consensus 2 ~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~--------------------- 48 (322)
T 1ub7_A 2 SGILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDE--------------------- 48 (322)
T ss_dssp CEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTC---------------------
T ss_pred cEEEEEEEECCCceecHHHHHHHh---CCC---------HHHHHHhcCceEEeecCCCC---------------------
Confidence 589999999999999999997653 111 36889999999999987655
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+..||+ ..+ +++++++|+|++.||..|.
T Consensus 49 ----~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl-~~~--~~~v~~aCas~~~al~~A~ 121 (322)
T 1ub7_A 49 ----YTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL-KAF--AYDLLAGCPGWIYALAQAH 121 (322)
T ss_dssp ----CHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC-CCE--EEEEECSTTHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC-CCE--EEeeCccchHHHHHHHHHH
Confidence 2899999999999999999999999999999988 6688999999999999 444 8899999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeee----eecCCC
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQ----TTIPDT 246 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 246 (390)
.+|++|..++|||+++|.++. +.+|.| +...++|||||+|+||++.+...++. ...+...+. .+.|..
T Consensus 122 ~~i~~g~~~~vlv~g~e~~s~-~~~~~d-----~~~~~~~GdGA~A~vL~~~~~~~~i~--~~~~~~~g~~~~~~~~~~~ 193 (322)
T 1ub7_A 122 ALVEAGLAQKVLAVGAEALSK-IIDWND-----RATAVLFGDGGGAAVVGKVREGYGFR--SFVLGADGTGAKELYHACV 193 (322)
T ss_dssp HHHHTTSCSEEEEEEEECGGG-TSCTTC-----HHHHTTBCCEEEEEEEECCCTTCEEE--EEEEEECGGGCTTEEEESS
T ss_pred HHHHcCCCCEEEEEEechhcc-ccChhh-----cccceeeccccEEEEEEecCCCCcee--EEEEEEecCCCCeEEeCCC
Confidence 999999999999999999886 334543 33578999999999999875412110 111121111 111211
Q ss_pred CCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHH
Q 036844 247 ENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRY 325 (390)
Q Consensus 247 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~ 325 (390)
...........++..+.++++|+++.+.+.++++++|+++|+++ +|| +|++||.|.++++.+.+.||++.+++..
T Consensus 194 ~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~d~~~~~lg~~~~~~~~--- 269 (322)
T 1ub7_A 194 APRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAV--- 269 (322)
T ss_dssp CSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCC---
T ss_pred CCCCCccccccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHcCCCHHHHHH---
Confidence 00000000011222334788899889999999999999999997 999 9999999999999999999999999875
Q ss_pred HHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 326 VLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 326 ~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
++.+|||+++|+++++|.+++++ |++++| +++++.+||.|++|++++|||++
T Consensus 270 ~~~~~Gh~~~As~~~~l~~~l~~----g~~~~g---~~~l~~~~G~G~~~~~~vl~~~~ 321 (322)
T 1ub7_A 270 NVDRYGNTSTASIPLALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG 321 (322)
T ss_dssp CHHHHCBCGGGHHHHHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEChhheeEEEEEEeCC
Confidence 48999999999999999999988 889999 99999999999999999999953
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=350.56 Aligned_cols=306 Identities=20% Similarity=0.278 Sum_probs=252.4
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.+ ..+ .+|+.+++||++||++.+ +
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~---~~~---------~~~i~~~~Gi~~r~~~~~-~-------------------- 48 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIV---DTS---------DEWITTRTGIKERRIAKE-E-------------------- 48 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECSS-C--------------------
T ss_pred ceEEEEEEEECCCceEcHHHHHHHc---CCC---------HHHHHHHhCceeeeecCC-C--------------------
Confidence 3789999999999999999997653 111 367889999999999865 3
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
...+|+.+|+++||+++|+++++||.|+++++++ +..|+.+.+|+..||++..+ +++++++|++++.||..|
T Consensus 49 -----~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~~~~--~~~v~~~C~s~~~al~~A 121 (309)
T 2ebd_A 49 -----TITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVY--AFDISAACSGFIYALDIA 121 (309)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCce--EEecCccchHHHHHHHHH
Confidence 2899999999999999999999999999999988 77899999999999998744 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCc
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENY 249 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (390)
..+|++|..++|||+++|.++. +.+|.+ +...++|||||+|+||++.+. .. .+........+...+.
T Consensus 122 ~~~i~~g~~~~vlv~g~e~~s~-~~~~~~-----~~~~~~~gdGaaA~vL~~~~~-~~------~i~~~~~~~~g~~~~~ 188 (309)
T 2ebd_A 122 DSFIKSGKAKNVLVIGAEKLSE-AVDWED-----RSTCVLFGDGAGAVVVTRSED-KS------DILATRMYAEGSLEEL 188 (309)
T ss_dssp HHHHHTTSCSEEEEEEEEEGGG-TCCTTC-----TTTTTTBCEEEEEEEEEECSS-SC------EEEEEEEEECGGGGGG
T ss_pred HHHHHCCCCCEEEEEEeccccc-ccCccc-----hhhccccccccEEEEEEecCC-CC------ceeEEEEEecCCccce
Confidence 9999999999999999999986 334432 234789999999999998765 21 1111110001111111
Q ss_pred eeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 250 ITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 250 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
+. ....++....++++++...+.+.++++++|+++|+++ +|| +|++|+.+.++++.+.+.||++.+++..+ +.
T Consensus 189 ~~--~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~-~did~~~~H~~~~~~~~~~~~~lg~~~~~~~~~---~~ 262 (309)
T 2ebd_A 189 LH--ADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKP-EEVSLVIPHQANVRIINALAEKLNIPKEKVFVN---IQ 262 (309)
T ss_dssp EE--ECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HH
T ss_pred eE--eCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCHHHHHHHHHHhCCCHHHhhhh---Hh
Confidence 11 1111222223577888888899999999999999997 999 99999999999999999999999998764 89
Q ss_pred hcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 329 EYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 329 ~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+|||+++|+++++|.+++++ |++++| |++++++||+|++|++++|||
T Consensus 263 ~~Gh~~~As~~~~L~~~~~~----g~~~~G---~~~l~~~~G~G~~~~~~~l~~ 309 (309)
T 2ebd_A 263 KYGNTSAASIPIALHEAIKE----GKVKRG---DLILMTAMGGGLTWGAVLLRY 309 (309)
T ss_dssp HHCBCGGGHHHHHHHHHHHT----TCCCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred hhcchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEC
Confidence 99999999999999999998 889999 999999999999999999997
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=363.77 Aligned_cols=307 Identities=18% Similarity=0.164 Sum_probs=249.4
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++.+.. ..+ .+|+.+++||++|+++.+++
T Consensus 2 ~v~I~~ig~y~P~~~v~~~~l~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~e-------------------- 49 (396)
T 1xpm_A 2 AIGIDKINFYVPKYYVDMAKLAEAR---QVD---------PNKFLIGIGQTEMAVSPVNQ-------------------- 49 (396)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT---TSC---------HHHHHTTTCCSEEEECCTTC--------------------
T ss_pred ceEEEEEEEeCCCeEecHHHHHHHh---CCC---------HHHHhhhcCceEEEeCCCCC--------------------
Confidence 4799999999999999999998764 121 36788999999999997665
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+..+|+..|+++||++ +++++||.||++|+++ +..|+++..|+..||++.... +++++++|+|++.||..|
T Consensus 50 -----~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~-~~~v~~aC~sg~~Al~~A 121 (396)
T 1xpm_A 50 -----DIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLA 121 (396)
T ss_dssp -----CHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCce-EEEeccccHHHHHHHHHH
Confidence 3899999999999988 6899999999999998 789999999999999986433 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEe-eeeeecCCCCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLS-CTQTTIPDTEN 248 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~ 248 (390)
..+|++|+.++|||+++|..+..+ ++ ...++|||||+|+||++++. .+.+.. .+... .+
T Consensus 122 ~~~I~sg~~~~vLvvg~e~s~~~~-~~--------~~~~~~GdGA~A~vl~~~~~-------i~~~~~~~g~~~----~d 181 (396)
T 1xpm_A 122 KDYLATRPNEKVLVIATDTARYGL-NS--------GGEPTQGAGAVAMVIAHNPS-------ILALNEDAVAYT----ED 181 (396)
T ss_dssp HHHHTTCTTCEEEEEEEEEECCCT-TC--------SSGGGCEEEEEEEEEEESCS-------SEEECSCCEEEE----CC
T ss_pred HHHHHcCCCCEEEEEeehhhcccc-CC--------CCCcccccceEEEEeccCCc-------eEEEEecccccc----ce
Confidence 999999999999999999843211 21 14789999999999998643 122211 11110 00
Q ss_pred ce-eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHc-----CCCcccch
Q 036844 249 YI-TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNL-----GLGKDKLW 321 (390)
Q Consensus 249 ~~-~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~l-----gi~~e~~~ 321 (390)
.+ .|.....++..+.++.+++++.+.+.++++++|+++|+++ +|| +|++||+|.++.+.+.+.| +++++++.
T Consensus 182 ~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~-~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~ 260 (396)
T 1xpm_A 182 VYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLR 260 (396)
T ss_dssp CCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHH
T ss_pred EEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHH
Confidence 00 1111111111223677888889999999999999999996 999 9999999999999999998 88988876
Q ss_pred hH----HHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 322 AS----RYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 322 ~~----~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
.+ |.++++||||++||+|++|++++++ +++++| |+|++++||+|++++++++++.+.
T Consensus 261 ~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~----~~l~~G---d~ill~s~GsG~~~~~~~~~v~~~ 321 (396)
T 1xpm_A 261 SGYEDAVDYNRYVGNIYTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVEG 321 (396)
T ss_dssp HHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred HHhhhhhhhhhhcCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEECcchhheEEEEEEccc
Confidence 43 1123999999999999999999998 889999 999999999999999999999754
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=361.55 Aligned_cols=309 Identities=17% Similarity=0.163 Sum_probs=246.7
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
+++|.++|+|+|+++++|+++++..+ .+ .+|+...+|+++|+++.+++
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~g---~~---------~~~~~~g~G~~~~~~~~~~e-------------------- 50 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHDG---AS---------KGKYTIGLGQDCLAFCTELE-------------------- 50 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHTT---CC---------TTTTTTTSCCCEEECCCTTC--------------------
T ss_pred ceEEEEEEEECCCeeccHHHHHHHhC---CC---------HHHhhhhhCceeeeeCCCCC--------------------
Confidence 69999999999999999999988642 22 25677788999998876665
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCC--CCccccceeeccccchHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGL--KPSVNRLMIYNQGCYMGGTVIR 167 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl--~~~~~~~~~i~~~C~~~~~al~ 167 (390)
++.+|+++|+++||+++|+++++||+||++|+++ +..|+++.+|++.||+ +... ++++++++|+|++.||.
T Consensus 51 -----~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~-~~~~v~~aC~gg~~AL~ 124 (450)
T 2f82_A 51 -----DVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDV-EGVDSTNACYGGTAALL 124 (450)
T ss_dssp -----CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCC-BCCEECSGGGHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCc-eEEEhhhhhHHHHHHHH
Confidence 3899999999999999999999999999999998 7899999999999999 3333 28999999999999999
Q ss_pred HHHHHHHcCCC--CeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCC
Q 036844 168 LAKDIAENNPG--ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPD 245 (390)
Q Consensus 168 ~A~~ll~~g~~--~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~ 245 (390)
+|..+|++|.. ++||||++|.++ +.+ + ....+|||||+|+||++++. . .+.....+... ..
T Consensus 125 ~A~~~I~sg~~~~~~vLVvg~e~~~--~~~-----~---~~~~~fGDGA~A~ll~~~~~-~-----~~~~~~~g~~~-~~ 187 (450)
T 2f82_A 125 NCVNWVESNSWDGRYGLVICTDSAV--YAE-----G---PARPTGGAAAIAMLIGPDAP-I-----VFESKLRGSHM-AH 187 (450)
T ss_dssp HHHHHHHSTTCCSCEEEEEEEEEEC--CSS-----S---TTGGGCEEEEEEEEEESSCS-E-----EEEEEEEEEEE-CC
T ss_pred HHHHHHHcCCCcCCeEEEEEeeecc--ccC-----C---CCCcccccceEEEEeccCCc-e-----EEEeccceeeh-hh
Confidence 99999999986 999999999986 221 1 14689999999999987654 1 12221111111 11
Q ss_pred CCCceeeEeecce--eEEEeCCcchHHHHHhHHHHHHHhhc------cCCCCCCCce-eEEEcCCCHHHHHHHHHHcC--
Q 036844 246 TENYITGQLKEMG--IYGHLSLDVPVAIGKYIGKCLSNAMS------PIGISDWNSL-FYVLHPGGDGLIDQVEKNLG-- 314 (390)
Q Consensus 246 ~~~~~~~~~~~~g--~~~~~~~~v~~~~~~~~~~~i~~~L~------~~gl~~~~di-~~i~h~~~~~~~~~~~~~lg-- 314 (390)
. +.+.....+ +..+.++.++..+.+.+.++++.+|+ ++|+++ +|| +|++||+|.++++.+.+.|+
T Consensus 188 ~---~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~~-~did~~v~Hq~~~~i~~~~~~~L~~~ 263 (450)
T 2f82_A 188 V---YDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSI-NDADYFVFHSPYNKLVQKSFARLLYN 263 (450)
T ss_dssp C---CSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCG-GGCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred c---cceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCCh-hhcCEEEecCChHHHHHHHHHHhccc
Confidence 0 111111101 11223567778888888999999996 899996 999 99999999999999999998
Q ss_pred ----------------CCc---------------ccch-------------hHHHHHhhcCCCccchHHHHHHHHHHhhh
Q 036844 315 ----------------LGK---------------DKLW-------------ASRYVLREYGNVGAASVFFILDEVRKKSF 350 (390)
Q Consensus 315 ----------------i~~---------------e~~~-------------~~~~~~~~~Gn~~sas~~l~L~~~~~~~~ 350 (390)
+|+ ||++ .++.++++||||++||+|++|++++++
T Consensus 264 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ek~~~~~~~~~~~~k~~~s~~~~~~~GN~~saSi~l~L~~~l~~-- 341 (450)
T 2f82_A 264 DFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHN-- 341 (450)
T ss_dssp HHHTTCTTCCHHHHHHHGGGTTCCHHHHHTCHHHHHHHHHHHHHHHHHHTGGGCHHHHHHCCCGGGHHHHHHHHHHHH--
T ss_pred ccccccccccccccccccccccccccccccchhHHHHHhhhhHHHHHHhhhHHHHHHHhcCchHHHHHHHHHHHHHHh--
Confidence 454 4333 233458999999999999999999997
Q ss_pred hhcc-ccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 351 EERK-ATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 351 ~~g~-i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
++ +++| |+|++++||+|++|++++++|.+.
T Consensus 342 --~~~~~~G---d~ill~s~GsG~~~~~~~l~~~~~ 372 (450)
T 2f82_A 342 --KHSDLAG---KRVVMFSYGSGSTATMFSLRLCEN 372 (450)
T ss_dssp --HGGGCTT---CEEEEEEEETTTEEEEEEEEECCC
T ss_pred --CccCCCC---CEEEEEeecCCcccEEEEEEEeCC
Confidence 74 8899 999999999999999999999754
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=360.89 Aligned_cols=310 Identities=17% Similarity=0.105 Sum_probs=240.4
Q ss_pred CC-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChH
Q 036844 9 RP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLD 87 (390)
Q Consensus 9 ~~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~ 87 (390)
|| +++|.++|+|+|+++++|+++++..+ .+ .+++...+||++|+++.+++
T Consensus 21 ~~~~vgI~aig~y~P~~~v~~~el~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~e----------------- 71 (478)
T 2p8u_A 21 QSMDVGIVALEIYFPSQYVDQAELEKYDG---VD---------AGKYTIGLGQAKMGFCTDRE----------------- 71 (478)
T ss_dssp HHHCCEEEEEEEECCSEEEEHHHHHHHHT---CC---------TTCCCCCCCCCEEECCCTTC-----------------
T ss_pred CCCceEEEEEEEECCCeEecHHHHHHHhC---CC---------hhHhecccCceEEEeCCCCC-----------------
Confidence 45 79999999999999999999998752 22 15678899999999987666
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHH---HcCCCCccccceeeccccchHH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVK---LLGLKPSVNRLMIYNQGCYMGG 163 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~---~lgl~~~~~~~~~i~~~C~~~~ 163 (390)
+..+|+++|+++||+++|+++++||+||++|+++ +..|+++.+|++ .+|++... +++++++|+|++
T Consensus 72 --------~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~~~~--~~dv~~aC~gg~ 141 (478)
T 2p8u_A 72 --------DINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIE--GIDTTNACYGGT 141 (478)
T ss_dssp --------CHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCCCCB--CCEEESGGGHHH
T ss_pred --------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCCCce--EEEEcchhHHHH
Confidence 3899999999999999999999999999999999 789999999994 45556543 899999999999
Q ss_pred HHHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeee
Q 036844 164 TVIRLAKDIAENNP--GARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241 (390)
Q Consensus 164 ~al~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 241 (390)
.||++|..++++|+ .++||||++|... |.+ .....+|||||+|+||++++. . .+.....++
T Consensus 142 ~AL~~A~~~i~sg~~~~~~aLVV~~Eia~--~~~--------~~~~~~fGdGA~A~Ll~~~~~-~-----~l~~~~~gs- 204 (478)
T 2p8u_A 142 AAVFNAVNWIESSSWDGRYALVVAGDIAV--YAT--------GNARPTGGVGAVALLIGPNAP-L-----IFERGLRGT- 204 (478)
T ss_dssp HHHHHHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCS-E-----EECTTCCEE-
T ss_pred HHHHHHHHHHHcCCccCCEEEEEEeeeec--ccC--------CCCCCcccceeEEEEEecCCC-c-----eEeecccee-
Confidence 99999999999998 8999999999642 321 114689999999999998654 1 010000111
Q ss_pred ecCCCCCceeeEeecce--eEEEeCCcchH---HHHHhHHHHHHHhhc--------cCCCCCCCce-eEEEcCCCHHHHH
Q 036844 242 TIPDTENYITGQLKEMG--IYGHLSLDVPV---AIGKYIGKCLSNAMS--------PIGISDWNSL-FYVLHPGGDGLID 307 (390)
Q Consensus 242 ~~p~~~~~~~~~~~~~g--~~~~~~~~v~~---~~~~~~~~~i~~~L~--------~~gl~~~~di-~~i~h~~~~~~~~ 307 (390)
......+. |. +..+ +....++.++. ...+.+.+.+++.++ ++|+++ +|+ +|++||+|.++++
T Consensus 205 ~~~~~~d~--~~-p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~~~~~~~~~g~~~-~did~~v~H~~~~ki~~ 280 (478)
T 2p8u_A 205 HMQHAYDF--YK-PDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQWQKEGNDKDFTL-NDFGFMIFHSPYCKLVQ 280 (478)
T ss_dssp EECCCCSE--EC-CCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCG-GGCSEEEECCSSHHHHH
T ss_pred cccchhhe--ee-ecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhhccccccccCCCh-HHcCEEEecCCcHHHHH
Confidence 11111110 00 0001 11122344444 344445556667776 789996 999 9999999999999
Q ss_pred HHHHHcC------------------------CCc---------c-------------cchhHHHHHhhcCCCccchHHHH
Q 036844 308 QVEKNLG------------------------LGK---------D-------------KLWASRYVLREYGNVGAASVFFI 341 (390)
Q Consensus 308 ~~~~~lg------------------------i~~---------e-------------~~~~~~~~~~~~Gn~~sas~~l~ 341 (390)
.+.+.|+ +|. | |+..++.++++||||++||++++
T Consensus 281 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ek~~~~~~~~~~~~k~~~~~~~~~~~GN~~saSi~l~ 360 (478)
T 2p8u_A 281 KSLARMLLNDFLNDQNRDKNSIYSGLEAFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGS 360 (478)
T ss_dssp HHHHHHHHHHHHHCTTGGGSGGGTTCGGGTTCCGGGCTTCHHHHHHHHHHTHHHHHHHTTGGGHHHHHHCCCGGGHHHHH
T ss_pred HHHHHhCcccccccccccccccccccchhccCChhhcccchhHHHHHHHHhHHHHHHhHHHHHHHHHhcCchHHHHHHHH
Confidence 9999998 666 5 53334557999999999999999
Q ss_pred HHHHHHhhhhhcc--ccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 342 LDEVRKKSFEERK--ATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 342 L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
|++++++ ++ +++| |+|++++||+|++|++++++|.+.
T Consensus 361 L~~ll~~----~~~~~~~G---drill~s~GsG~~~~~~~l~~~~~ 399 (478)
T 2p8u_A 361 LASVLAQ----YSPQQLAG---KRIGVFSYGSGLAATLYSLKVTQD 399 (478)
T ss_dssp HHHHHHH----SCHHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred HHHHHHh----CCccCCCC---CEEEEEEEcchhhhEEEEEEEeCC
Confidence 9999997 76 7899 999999999999999999999754
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=357.81 Aligned_cols=316 Identities=16% Similarity=0.112 Sum_probs=240.0
Q ss_pred C-CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHH
Q 036844 10 P-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDA 88 (390)
Q Consensus 10 ~-~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~ 88 (390)
| +|+|.++|.|+|+++++|+|+++.. ..+ .+||.+++||++|+++.++|.
T Consensus 3 ~~~VgI~~~g~y~P~~~v~~~~l~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~E~----------------- 53 (460)
T 2wya_A 3 PKDVGILALEVYFPAQYVDQTDLEKYN---NVE---------AGKYTVGLGQTRMGFCSVQED----------------- 53 (460)
T ss_dssp CSSCEEEEEEEECCSEEEEHHHHHHHT---TCC---------TTCCCCCCCCCEEECCCTTCC-----------------
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHh---CCC---------HHHHHHhhCcEEEEECCCCCC-----------------
Confidence 5 7999999999999999999998764 222 268899999999999988873
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCcc-ccceeeccccchHHHHH
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSV-NRLMIYNQGCYMGGTVI 166 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~-~~~~~i~~~C~~~~~al 166 (390)
+.+||++|+++||+++|++|++||+||++|+++ +..|++++.|++.||+...+ ..++|++++|+|+++||
T Consensus 54 --------~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al 125 (460)
T 2wya_A 54 --------INSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASL 125 (460)
T ss_dssp --------HHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCeeEechhhhhhhHHHHH
Confidence 899999999999999999999999999999999 89999999999999754221 12799999999999999
Q ss_pred HHHHHHHHcCCCCeE--EEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEee-eee-e
Q 036844 167 RLAKDIAENNPGARV--LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSC-TQT-T 242 (390)
Q Consensus 167 ~~A~~ll~~g~~~~v--Lvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~-~~~-~ 242 (390)
.+|..++++|+.+++ +++++|... +.+ .....+|||||+|++++.++. ............. ... .
T Consensus 126 ~~A~~~i~~g~~~~~lvvv~~s~~~~--~~d--------~~~~~~~GdGA~A~l~~~~~~-~~~~~~~~~~~~~~~~df~ 194 (460)
T 2wya_A 126 FNAANWMESSSWDGRYAMVVCGDIAV--YPS--------GNARPTGGAGAVAMLIGPKAP-LALERGLRGTHMENVYDFY 194 (460)
T ss_dssp HHHHHHHTSTTCCSCEEEEEEEEEEC--CCS--------STTGGGCEEEEEEEEEESSCS-EEECTTCCEEEECCCCSEE
T ss_pred HHHHHHHHhccccceEEEEEeccccc--ccc--------ccccccCcchHHhhhcccCCc-ceeecccccccccchhhhh
Confidence 999999999986544 333444322 322 124578999999999998776 2111000011100 001 1
Q ss_pred cCCCCCceeeEeeccee-----EEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCC-
Q 036844 243 IPDTENYITGQLKEMGI-----YGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGL- 315 (390)
Q Consensus 243 ~p~~~~~~~~~~~~~g~-----~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi- 315 (390)
.|....... ..+|. ..+.++++|.++.+.+.+.++++|+++|++. +|+ ++++||+|.++.+...++|++
T Consensus 195 ~p~~~s~~~---~~dg~~s~~~~~~~g~~v~~~~~~~~~~~~~~~l~~~~~~~-~d~d~~v~Hqp~~r~~~k~~~rL~~~ 270 (460)
T 2wya_A 195 KPNLASEYP---IVDGKLSIQCYLRALDRCYTSYRKKIQNQWKQAGSDRPFTL-DDLQYMIFHTPFCKMVQKSLARLMFN 270 (460)
T ss_dssp CCCTTCSCC---EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCG-GGCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ccCCCCCCc---ccCCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHhhhhhcccchHHHHHHHHHhcch
Confidence 122111000 01110 1122567888889999999999999999996 999 999999999988877666543
Q ss_pred ------------------------------------------------CcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 316 ------------------------------------------------GKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 316 ------------------------------------------------~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
+.++... ++++||||++||+|++|+++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~~---~~~~~GNt~sASiplaL~~ll~ 347 (460)
T 2wya_A 271 DFLSASSDTQTSLYKGLEAFGGLKLEDTYTNKDLDKALLKASQDMFDKKTKASLY---LSTHNGNMYTSSLYGCLASLLS 347 (460)
T ss_dssp HHHHSCHHHHHHHCGGGGGGTTCCGGGGGTCHHHHHHHHHHHHHHHHHHTGGGGH---HHHHHCCCGGGHHHHHHHHHHH
T ss_pred hhhhcccchhhhhhhhhhhhcCCchhhhhhhhHHHHHHHHHHHHHhhcchhhhhh---HHHhhCCcchhhHHHHHHHHHH
Confidence 2233333 5889999999999999999997
Q ss_pred hhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 348 KSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 348 ~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+.. +++++| |+|+|+|||+|+.+..+.+++.+.
T Consensus 348 ~~~--~~~~~G---drIll~~fGSGl~s~~fs~~v~~~ 380 (460)
T 2wya_A 348 HHS--AQELAG---SRIGAFSYGSGLAASFFSFRVSQD 380 (460)
T ss_dssp HSC--HHHHTT---CEEEEEEEETTTEEEEEEEEECSC
T ss_pred hcc--ccCCCC---CEEEEEEecCCccceEEEEEEeCC
Confidence 522 667899 999999999999999999988654
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=9e-28 Score=227.03 Aligned_cols=245 Identities=13% Similarity=0.158 Sum_probs=169.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
..++|+.+|+++||+++|++++|||+||+++.+++.. +++.++++||++ +++++++|+|+++||.+|..++++
T Consensus 54 a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~--~A~~va~~Lgip-----afdV~~ACsg~~~AL~~Aa~~I~s 126 (347)
T 3lma_A 54 AERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNV--TANYVARHLKIP-----FLCLFGACSTSMESIAISSALIDG 126 (347)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSST--THHHHHHHHCCC-----EEEBCCSTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchh--HHHHHHHHhCCC-----EEEecChhHHHHHHHHHHHHHHhc
Confidence 4899999999999999999999999999999988433 789999999754 799999999999999999999999
Q ss_pred CCCCeEEEEEeecccc---ccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceee
Q 036844 176 NPGARVLVVCSDIRVL---DFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITG 252 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 252 (390)
|..++||||++|++|. +|+.|.+.....+.+..+++|||+|+||++.+.. +.++-...+.. +++
T Consensus 127 G~~~~VLVVGaE~~S~aerq~r~p~e~g~q~p~ta~~t~dGAGA~VL~~~g~~-----p~I~~~t~Gkv--------vd~ 193 (347)
T 3lma_A 127 GFAKRALAATSSHNATAERQFRYPTEYGGQKPGTATSTVTGSGAVVLSQQPGG-----IKITSATVGRV--------IDL 193 (347)
T ss_dssp TSCSEEEEEEEECGGGTTCCC----------------CCCEEEEEEEESSCCS-----EEEEEEECCCC--------BCC
T ss_pred CCCCEEEEEEeccccchhhhccCcchhcccCCchhcEEccceeEEEEEecCCC-----Cceeeeeeeee--------ecc
Confidence 9999999999999984 3333332212234467889999999999975541 12222111111 000
Q ss_pred EeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEE---EcCCCHHHHHHHHHHcCCCcccchhHHHHHh
Q 036844 253 QLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYV---LHPGGDGLIDQVEKNLGLGKDKLWASRYVLR 328 (390)
Q Consensus 253 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i---~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~ 328 (390)
...+ . +.++ ........+.|.+.|++.|+++ +|+ +++ +||.|.+|++.+.+++|++.++.+... -+.
T Consensus 194 g~~d-~--~nmg----~amaPaA~~ti~~~l~d~g~~~-~d~D~ivtgdL~q~g~~il~~l~~~~g~~~~~~~~dc-g~~ 264 (347)
T 3lma_A 194 GITD-S--QDMG----SAMAPAAADTIKQHLEDLGRTP-DDYDLILTGDLSGVGSPILKDLLKEEGINVGTKHNDC-GLM 264 (347)
T ss_dssp SCCC-T--TCHH----HHHHHHHHHHHHHHHHHHTCCG-GGCSEEEEESCHHHHHHHHHHHHHHTTCCCGGGEEEG-GGT
T ss_pred CCCC-C--CCcc----ccchHHHHHHHHHHHHHhCCCH-HHcCEEecCChHHHHHHHHHHHHHHcCCChhHCcccc-ceE
Confidence 0000 0 0011 1223444567899999999997 999 999 789999999999999999998876521 144
Q ss_pred hcCCCc--------cchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccc
Q 036844 329 EYGNVG--------AASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTV 375 (390)
Q Consensus 329 ~~Gn~~--------sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ 375 (390)
-|+|.. ++....+|.-.+..+ ++.|. .++||++++|+.+|-
T Consensus 265 iy~~~~~~~~ggsg~~csa~v~~~~~~~~-----~~~g~-~~ril~~~tGalls~ 313 (347)
T 3lma_A 265 IYTPDQQVFAGGSGCACSAVVTFAHIFKE-----IEAGR-LNRVLVVATGALLSP 313 (347)
T ss_dssp SSCC---------CCCCHHHHHHHTHHHH-----HHTTS-CSEEEEEEEEECCCH
T ss_pred EecCCCcccCCCCccccHHHHHHHHHHHH-----HhcCc-ccEEEEEecccccCc
Confidence 455443 366666666555432 44332 278999999998763
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-21 Score=190.26 Aligned_cols=251 Identities=18% Similarity=0.128 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.+|+++||+++|++++|||.|++++.++ ...|.++.+++..||++.... +++++.+|+|++.||..|..+|++
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~p-~~~v~~~Css~~~al~~A~~~I~~ 107 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSVP-SYTVNKLCGSGLKSVQLAAQSITS 107 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCce-EEEccccchHHHHHHHHHHHHHhC
Confidence 899999999999999999999999999999888 677899999999999975433 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c-------------------------------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD-F------------------------------------------------------------- 193 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~------------------------------------------------------------- 193 (390)
|..++|||+++|.+|.. +
T Consensus 108 G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~ 187 (395)
T 4e1l_A 108 GENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQN 187 (395)
T ss_dssp TSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999988740 0
Q ss_pred -----------------------------CCCCccch-----h---------------hhhhhhhhccCcEEEEeccCCC
Q 036844 194 -----------------------------HEPSETHL-----D---------------VLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 194 -----------------------------~~~~~~~~-----~---------------~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
.++++.-+ + .....+.+||||+|+||.+.+.
T Consensus 188 ~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~ 267 (395)
T 4e1l_A 188 KAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQK 267 (395)
T ss_dssp HHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHHH
Confidence 00000000 0 0012345689999999987542
Q ss_pred CCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCC
Q 036844 225 ISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPG 301 (390)
Q Consensus 225 ~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~ 301 (390)
.. ...+...+.+.+.... .+.. .......+++++|+++|+++ +|| ++.+|+.
T Consensus 268 -A~~~g~~~~a~i~g~~~~~~--------------------~p~~---~~~~~~~ai~~al~~agl~~-~dId~ve~~d~ 322 (395)
T 4e1l_A 268 -ADELGIRPLAKIKSYASAGV--------------------EPEV---MGTGPIPATRKALKKAGLSI-NDIDLIEANEA 322 (395)
T ss_dssp -HHHHTCCCSEEEEEEEEEEC--------------------CGGG---TTCTHHHHHHHHHHHTTCCG-GGCSEEEECCS
T ss_pred -HHHCCCCeEEEEEEEEEccC--------------------CCCc---chHHHHHHHHHHHHHcCCCH-HHcCEEEecCh
Confidence 10 0011234443322110 0000 01123467899999999997 999 9999999
Q ss_pred CHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 302 ~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
.......+.+.||++.+++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.+....+.|....+++++
T Consensus 323 fa~~~~~~~~~lg~~~~~v~~~-gg~~~~Gh~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e 394 (395)
T 4e1l_A 323 FAAQALAVKNELQIDSSKLNVN-GGAIALGHPIGASGARILVTLIYEMQ--K--RKV---ETGLATLCIGGGQGISMVVS 394 (395)
T ss_dssp BHHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCTTTHHHHHHHHHHHHHH--H--HTC---SEEEEEEESSTTEEEEEEEE
T ss_pred hHHHHHHHHHHhCCCCCCCCcC-CchhhcCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCCCceEEEEEe
Confidence 9999999999999999887653 23566899998887666666665411 1 122 45444444444444455554
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=189.59 Aligned_cols=252 Identities=12% Similarity=0.077 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.+|+++||+++|++++|||.|++++.++ ...|.++.+++..||++.... +++++.+|+|++.||++|..+|++
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~~ 107 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT-GYTIQRQCSSGMQAIMSAAMQIQL 107 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce-EEEecCcchHHHHHHHHHHHHHhC
Confidence 899999999999999999999999999999888 667889999999999974332 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c-------------------------------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD-F------------------------------------------------------------- 193 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~------------------------------------------------------------- 193 (390)
|..++|||+++|.+|.. +
T Consensus 108 G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 187 (394)
T 3ss6_A 108 GVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTL 187 (394)
T ss_dssp TSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 99999999999998731 1
Q ss_pred ---------------------------CCCCccch-----h---------------hhhhhhhhccCcEEEEeccCCCCC
Q 036844 194 ---------------------------HEPSETHL-----D---------------VLVVQAVFGDGAGAAIIGAGPDIS 226 (390)
Q Consensus 194 ---------------------------~~~~~~~~-----~---------------~~~~~~lfGDgAaA~vl~~~~~~~ 226 (390)
.+|++.-+ + .....+.+||||+|+||.+.+. .
T Consensus 188 A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~-A 266 (394)
T 3ss6_A 188 ALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEK-A 266 (394)
T ss_dssp HHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHH-H
T ss_pred HHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCccCCCCceecCccCCcccceeEEEeccHHH-H
Confidence 00000000 0 0012345679999999987542 1
Q ss_pred c--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCH
Q 036844 227 N--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGD 303 (390)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~ 303 (390)
. ...+...+.+.+... . .+... ......+++++|+++|+++ +|| ++-+|+...
T Consensus 267 ~~~g~~~~a~I~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~agl~~-~dId~ve~~d~fa 322 (394)
T 3ss6_A 267 KEKGLQPLARIVGYSVAG---V-----------------DPKIM---GIGPAPAIRKGLEKVDWSL-EDADLLEINEAFA 322 (394)
T ss_dssp HHHTCCCSEEEEEEEEEE---C-----------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCSEEEECCSBH
T ss_pred HHCCCCceEEEEEEEEec---C-----------------CCccc---hHHHHHHHHHHHHHcCCCH-HHcCEEEeCCchH
Confidence 0 001122444332211 0 01111 1233567899999999997 999 999999998
Q ss_pred HHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 304 GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 304 ~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.....+.+.||++.+++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.|....+.|....+++++.
T Consensus 323 ~~~~~~~~~lg~~~~~v~~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e~ 393 (394)
T 3ss6_A 323 AQYLAVEKELDLDREKVNVN-GSGVGLGHPIGCTGARITVSLIHELK--R--RGL---EKGIASLCVGGGIGVALFIEA 393 (394)
T ss_dssp HHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCCCC-cchHhhCCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEEccCcCceeEEEEEc
Confidence 88999999999999887653 23467899999997666666655411 1 123 454443333334445566653
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.5e-21 Score=186.51 Aligned_cols=251 Identities=15% Similarity=0.103 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.+|+++||+++|++++|||.|+++++++ +..|.++.+++..||++.... +++++.+|++++.||..|..+|++
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p-~~~v~~aCss~~~al~~A~~~I~~ 109 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKP-AMTINIVCGSGLRSVSMASQLIAL 109 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCce-EEEeccccHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999988 778999999999999985433 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-cC------------------------------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD-FH------------------------------------------------------------ 194 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~~------------------------------------------------------------ 194 (390)
|..++|||+++|.+|.. +.
T Consensus 110 G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~ 189 (396)
T 4dd5_A 110 GDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQN 189 (396)
T ss_dssp TSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999998741 10
Q ss_pred -----------------------------CCCcc-----chh---------------hhhhhhhhccCcEEEEeccCCCC
Q 036844 195 -----------------------------EPSET-----HLD---------------VLVVQAVFGDGAGAAIIGAGPDI 225 (390)
Q Consensus 195 -----------------------------~~~~~-----~~~---------------~~~~~~lfGDgAaA~vl~~~~~~ 225 (390)
++++. +.+ .....+.+||||+|+||.+.+.
T Consensus 190 ~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~- 268 (396)
T 4dd5_A 190 KAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEK- 268 (396)
T ss_dssp HHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHH-
T ss_pred HHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHH-
Confidence 00000 000 0012345689999999987542
Q ss_pred Cc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCC
Q 036844 226 SN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGG 302 (390)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~ 302 (390)
.. ...+...+.+.+.... .+.. .......+++++|+++|+++ +|| +|-+|...
T Consensus 269 A~~~g~~~~a~I~g~~~~~~--------------------~p~~---~~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f 324 (396)
T 4dd5_A 269 AEELGIEPLATIVSYGTAGV--------------------DPKI---MGYGPVPATKKALEAANMTI-EDIDLVEANEAF 324 (396)
T ss_dssp HHHHTCCCSEEEEEEEEEEC--------------------CGGG---GGGTHHHHHHHHHHHHTCCG-GGCSEEEECCSB
T ss_pred HHHCCCCceEEEEEEEEecC--------------------CCCc---ccHHHHHHHHHHHHHcCCCH-HHcCEEEecChH
Confidence 10 0012234444322110 0010 11234567899999999997 999 99999988
Q ss_pred HHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 303 DGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 303 ~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
......+.+.||++++++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.|....+.|....+++|+
T Consensus 325 ~~~~~~~~~~lg~~~~~~n~~-gg~~~~GH~~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~ggG~g~a~~~e 395 (396)
T 4dd5_A 325 AAQSVAVIRDLNIDMNKVNVN-GGAIAIGHPIGCSGARILTTLLYEMK--R--RDA---KTGLATLCIGGGMGTTLIVK 395 (396)
T ss_dssp HHHHHHHHHHHTCCTTSBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---SEEEEEEEETTTEEEEEEEE
T ss_pred HHHHHHHHHHhCCCCCccCCC-CchhhccCcHHHHHHHHHHHHHHHHH--h--cCC---CeEEEEEcccCCceeEEEEe
Confidence 777778889999988776543 23566899998887777666665411 1 122 45555544444455566665
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=187.27 Aligned_cols=270 Identities=12% Similarity=0.088 Sum_probs=181.6
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C---------------------------CCCcH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V---------------------------DMPGA 135 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~---------------------------~~p~~ 135 (390)
.|.....+...+|+.+|+++||+++|+++++|| .|+++++++ + ..|+.
T Consensus 64 ~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (424)
T 1tqy_A 64 PRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYL 143 (424)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhccccccc
Confidence 344455566789999999999999999999999 688887654 2 11222
Q ss_pred -HH----HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc---------cCCC----
Q 036844 136 -DV----RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD---------FHEP---- 196 (390)
Q Consensus 136 -a~----~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~~---------~~~~---- 196 (390)
+. +|+..||+.. + ++.++.+|+|++.||+.|..+|++|.++.+||+++|.+ +.. ...+
T Consensus 144 ~a~~~~~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~ 220 (424)
T 1tqy_A 144 VPSVMPAEVAWAVGAEG-P--VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDD 220 (424)
T ss_dssp STTHHHHHHHHHHTCCS-C--EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSC
T ss_pred ccchhHhHHHHhcCCCC-c--eEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCC
Confidence 34 9999999986 4 78999999999999999999999999999999999985 210 0111
Q ss_pred -Ccc--chhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHH
Q 036844 197 -SET--HLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIG 272 (390)
Q Consensus 197 -~~~--~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 272 (390)
+.. ..+....++++||||+|+||++.+.- ........++.+.+......+.. .+. + ..
T Consensus 221 p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~---------------~p~-~--~g 282 (424)
T 1tqy_A 221 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMT---------------GLK-A--DG 282 (424)
T ss_dssp GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSS---------------CCC-T--TC
T ss_pred CCCCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCC---------------CCC-C--CH
Confidence 000 00011247899999999999875320 00001123444332221111000 000 0 01
Q ss_pred HhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 273 KYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 273 ~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
....++++++|+++|+++ +|| ++.+|+.+..+. +.+.+.++.+.+++..+ .+...+||+.+|+-++.|..++
T Consensus 283 ~~~~~ai~~al~~agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~-s~k~~~GH~~~AaG~~~l~~~~ 360 (424)
T 1tqy_A 283 REMAETIRVALDESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACV 360 (424)
T ss_dssp HHHHHHHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEecCccCcCcCHHHHHHHHHHhcccCCCCeee-ccccccccChhhhHHHHHHHHH
Confidence 245678999999999997 999 999999987753 34556676544444432 1345689999999888777644
Q ss_pred Hhhhhhcccc------------------------CCCCCceEEEEEEcccccceeeeeEeec
Q 036844 347 KKSFEERKAT------------------------TGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 347 ~~~~~~g~i~------------------------~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
.. .+++.+. +. ++++..+||.|.+.++++|+..+
T Consensus 361 l~-l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~---~~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 361 LA-LEHGVVPPTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp HH-HHHCEECCBTTCCSBBTTBCSCCCBSSCEECCC---SEEEEEEEETTTEEEEEEEECHH
T ss_pred HH-HHcCCcCCCCCCCCCCCCCCcccCCCcccCCCC---CEEEEccccCCceEEEEEEccCC
Confidence 32 1114332 23 78999999999999999998753
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.9e-20 Score=182.22 Aligned_cols=261 Identities=16% Similarity=0.118 Sum_probs=179.3
Q ss_pred HhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCCC---------------------------CCCcHHHHHHHH
Q 036844 94 IDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYGV---------------------------DMPGADVRLVKL 142 (390)
Q Consensus 94 ~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~---------------------------~~p~~a~~v~~~ 142 (390)
.+...+|+.+|+++||+++|+++++|| .|+++++++. ..+..+.+|+..
T Consensus 95 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 174 (437)
T 2gqd_A 95 MDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSID 174 (437)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHH
Confidence 345789999999999999999999999 9999887541 112578999999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccccc--------------------CCCCccchh
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF--------------------HEPSETHLD 202 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~--------------------~~~~~~~~~ 202 (390)
||+.. + ++.++.+|++++.||..|..+|++|.++.+||+++|.....+ ..|.+.
T Consensus 175 lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~pfd~--- 248 (437)
T 2gqd_A 175 LGAKG-P--NGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQE--- 248 (437)
T ss_dssp HTCCS-S--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSSCTTCT---
T ss_pred hCCCC-c--eEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccCCCCCccccCCCCC---
Confidence 99986 4 788999999999999999999999999999999999742111 112221
Q ss_pred hhhhhhhhccCcEEEEeccCCCCC--ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 203 VLVVQAVFGDGAGAAIIGAGPDIS--NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 203 ~~~~~~lfGDgAaA~vl~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...++++||||+|+||++.+. . .......++.+.+....... + + .+.. ......++++
T Consensus 249 -~~~G~v~geGaaavvL~~~~~-A~~~g~~i~a~I~g~~~~~dg~~---~-----------~-~p~~---~~~~~~~ai~ 308 (437)
T 2gqd_A 249 -GRDGFVMGEGAGILVIESLES-AQARGANIYAEIVGYGTTGDAYH---I-----------T-APAP---EGEGGSRAMQ 308 (437)
T ss_dssp -TCCSBCBBCEEEEEEEEEHHH-HHHHTCCCCEEEEEEEEEECCSC---S-----------S-SCCG---GGHHHHHHHH
T ss_pred -CCCCceeeceEEEEEECcHHH-HHhCCCceEEEEEEEEecCCCCC---C-----------C-CCCC---CHHHHHHHHH
Confidence 124789999999999986532 1 00011234443322211100 0 0 0110 1234567899
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
++|+++|+++ +|| +|.+|+.+..+.+ .+.+.++.+.+++..+ .+...+||+.+|+-.+.|..++.. ..++.
T Consensus 309 ~Al~~Agl~p-~dId~ve~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~-s~k~~~GH~~gAaG~~~li~~~l~-l~~~~ 385 (437)
T 2gqd_A 309 AAMDDAGIEP-KDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVS-STKSMTGHLLGATGGIEAIFSALS-IKDSK 385 (437)
T ss_dssp HHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTSCEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTE
T ss_pred HHHHHcCCCH-hhCCEEEEECCCCcCcCHHHHHHHHHHHhccCCCceee-cchhhhcCChhhhhHHHHHHHHHH-HhcCC
Confidence 9999999997 999 9999999987643 4556677654555432 134568999999877776655542 11133
Q ss_pred ccCC---------------------CCCceEEEEEEcccccceeeeeEee
Q 036844 355 ATTG---------------------EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 355 i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
+.|- .+.++++..+||.|.+-++++|+..
T Consensus 386 ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 435 (437)
T 2gqd_A 386 VAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKF 435 (437)
T ss_dssp ECCBTTCCSCCSSCCSBCCBSSCEECCCSEEEEEEECGGGEEEEEEEECC
T ss_pred CCCCCCCCCCCCCCCcccCCCccccCCCCEEEEccCcCCCeeEEEEEEec
Confidence 2100 0015788899999999999998753
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-19 Score=178.72 Aligned_cols=272 Identities=14% Similarity=0.119 Sum_probs=178.1
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecC-----------------C-CCCC---------cHH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFY-----------------G-VDMP---------GAD 136 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~-----------------~-~~~p---------~~a 136 (390)
.|.....+....|+.+|+++||+++|+++++|| .|++++++ + ...| ..+
T Consensus 65 ~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 144 (413)
T 3o04_A 65 KKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGS 144 (413)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHH
Confidence 344444556789999999999999999999999 99998864 1 1222 248
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc--------------ccCCCCcc--c
Q 036844 137 VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL--------------DFHEPSET--H 200 (390)
Q Consensus 137 ~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~--------------~~~~~~~~--~ 200 (390)
.+|+..||+.. + ++.++.+|+|++.||..|..+|++|.++.|||+++|.+.. ...+|... .
T Consensus 145 ~~ia~~lgl~g-p--~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~~~~p~~~~~p 221 (413)
T 3o04_A 145 GQVSIRFGAKG-I--NSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETACRP 221 (413)
T ss_dssp HHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCCTTTSCCT
T ss_pred HHHHHHhCCCC-c--ceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccCCCCCCCCcCC
Confidence 89999999986 3 7889999999999999999999999999999999998310 00001100 0
Q ss_pred hhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHH
Q 036844 201 LDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCL 279 (390)
Q Consensus 201 ~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 279 (390)
.+....++++||||+|+||++.+.- ........++.+.+......+ + . .+. + ......+++
T Consensus 222 fd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~---~-----------~-~~~-~--~~~~~~~a~ 283 (413)
T 3o04_A 222 FDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYH---I-----------T-APA-P--NGEGAARAM 283 (413)
T ss_dssp TBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSC---S-----------S-SCC-G--GGHHHHHHH
T ss_pred CcCCCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCC---C-----------C-CCC-C--CHHHHHHHH
Confidence 0112247899999999999874320 000011234443322211100 0 0 000 0 123456789
Q ss_pred HHhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhc
Q 036844 280 SNAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEER 353 (390)
Q Consensus 280 ~~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g 353 (390)
+++|+++|+++ +|| ++.+|..+....+. +.+.++...+++..+ ..-..+||+.+|+-.+.+..++.. .+++
T Consensus 284 ~~al~~agl~~-~dId~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~~~~~~~~-l~~~ 360 (413)
T 3o04_A 284 KMAIDDAGLTP-DKVDYINAHGTSTPYNDEYETQAIKTVFGEHAKKLAIS-STKSMTGHTLGASGGIEAIFALLT-IRDN 360 (413)
T ss_dssp HHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHT
T ss_pred HHHHHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcccCCCCcee-cccccccccHHHHHHHHHHHHHHH-HHhC
Confidence 99999999997 999 99999988765543 344555443343332 135567999999876666555442 1112
Q ss_pred cccC-----------------C----CCCceEEEEEEcccccceeeeeEee
Q 036844 354 KATT-----------------G----EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 354 ~i~~-----------------G----~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
.+.| + .+..+++.-+||.|.+-.+++|+..
T Consensus 361 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sfgfgG~na~~vl~~~ 411 (413)
T 3o04_A 361 IIAPTIHLKNQDEVCDLDYVPNEAREANVNVVISNSFGFGGHNATLVFKRI 411 (413)
T ss_dssp EECCBTTCCSBCSSCCSCCCBSSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CcCCCCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCceEEEEEEEeC
Confidence 2210 0 0115678889999999999999864
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=183.41 Aligned_cols=268 Identities=14% Similarity=0.131 Sum_probs=185.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC---------------------------CCCCcH
Q 036844 87 DARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG---------------------------VDMPGA 135 (390)
Q Consensus 87 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~---------------------------~~~p~~ 135 (390)
..|.....+....|+.+|+++||+++|+++++|| .|++++++. ...+..
T Consensus 78 ~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
T 3ho9_A 78 SRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV 157 (427)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHH
Confidence 4455555566889999999999999999999999 588877631 123457
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccccc---------------------C
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF---------------------H 194 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~---------------------~ 194 (390)
+.+|+..||+.. + ++.+..+|++++.||..|..+|++|.++.|||+++|.++..+ .
T Consensus 158 a~~is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~ 234 (427)
T 3ho9_A 158 AGHLTIMYGLRG-P--SISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAAS 234 (427)
T ss_dssp HHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHC
T ss_pred HHHHHHHhCCCC-C--eecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCccc
Confidence 899999999986 3 789999999999999999999999999999999999975210 0
Q ss_pred CCCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHH
Q 036844 195 EPSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGK 273 (390)
Q Consensus 195 ~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 273 (390)
.|.+ ....++++||||+|+||++.+.- ........++.+.+.... +..+. .+. ....
T Consensus 235 ~pfd----~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d--------------g~~~~-~p~---~~~~ 292 (427)
T 3ho9_A 235 RPWD----KERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSD--------------AYHMT-SPP---ENGA 292 (427)
T ss_dssp CTTB----TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEEC--------------CSBTT-BCC---TTCH
T ss_pred CCcc----CCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCC--------------CCCcC-CCC---CCHH
Confidence 1111 12247899999999999874320 000011234443322211 10000 000 0112
Q ss_pred hHHHHHHHhhccCCCCCCCce-eEEEc-----CCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 274 YIGKCLSNAMSPIGISDWNSL-FYVLH-----PGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 274 ~~~~~i~~~L~~~gl~~~~di-~~i~h-----~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
...++++++|+++|+++ +|| ++.+| +++......+.+.|+.+.+++..+ .....+||+.+|+-.+.|..++.
T Consensus 293 ~~~~ai~~al~~Agl~~-~dId~ve~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~~ 370 (427)
T 3ho9_A 293 GAALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSIL 370 (427)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCH-HHccEEEecCCcCCCcCHHHHHHHHHHhcccCCCeEEe-cchHhhccCHHHHHHHHHHHHHH
Confidence 34578899999999997 999 99999 666667788888898876666543 24567999999987666665544
Q ss_pred hhhhhccccC----------------------CCCCceEEEEEEcccccceeeeeEe
Q 036844 348 KSFEERKATT----------------------GEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 348 ~~~~~g~i~~----------------------G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
. .+++.+.+ -++.++++..+||.|.+.++++|+.
T Consensus 371 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~ 426 (427)
T 3ho9_A 371 A-LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 426 (427)
T ss_dssp H-HHHTEECCBTTCSSBCTTCCCBCCBSSCEECSSCCEEEEEEEETTTEEEEEEEEC
T ss_pred H-HhcCCCCCCCCCCCCCCCCCccccccccccCCCCCEEEEeCccCCceeEEEEEEe
Confidence 3 11132111 0012688999999999999999875
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-20 Score=181.25 Aligned_cols=267 Identities=13% Similarity=0.120 Sum_probs=183.2
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CC-------------------------CC-cHH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-VD-------------------------MP-GAD 136 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~~-------------------------~p-~~a 136 (390)
.|.....+...+|+.+|+++||+++|+++++|| .++++++++ +. .| ..+
T Consensus 62 ~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 141 (408)
T 1j3n_A 62 RKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMAS 141 (408)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHH
Confidence 344445566899999999999999999999998 477776654 21 23 478
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCC-----------
Q 036844 137 VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHE----------- 195 (390)
Q Consensus 137 ~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~----------- 195 (390)
.+|+..||++. + ++.++.+|++++.||+.|..+|++|.++.+||+++|..... +..
T Consensus 142 ~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~ 218 (408)
T 1j3n_A 142 AHIAMRYGFTG-P--SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASR 218 (408)
T ss_dssp HHHHHHHTCCS-C--BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCC
T ss_pred HHHHHHhCCCC-c--eeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcc
Confidence 99999999985 4 78999999999999999999999999999999999974211 111
Q ss_pred CCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHh
Q 036844 196 PSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKY 274 (390)
Q Consensus 196 ~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~ 274 (390)
|.+. ...++++||||+|+||++.+.- ........++.+.+......+ + . .+.. ....
T Consensus 219 pfd~----~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~-----------~-~p~~---~~~~ 276 (408)
T 1j3n_A 219 PFTL----SRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHH---I-----------T-EPHP---EGKG 276 (408)
T ss_dssp TTBT----TCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---S-----------S-CCCT---TCHH
T ss_pred cCcC----CCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCC---C-----------C-CCCC---CHHH
Confidence 1111 1247899999999999864320 000011234443322211100 0 0 0100 1134
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHH-----HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..++++++|+++|+++ +|| ++.+|+.+..+ +..+.+.||.+.+++..+ .....+||+.+|+-++.|..++..
T Consensus 277 ~~~ai~~al~~Agl~~-~dId~ve~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~~AsG~~~li~~~l~ 354 (408)
T 1j3n_A 277 AALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQA 354 (408)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhcCcCCCceEE-CchhhhccCHHHHHHHHHHHHHHH
Confidence 5678899999999997 999 99999998876 667778888766665542 135679999999988877655542
Q ss_pred hhhhccccCCC--------------------CCceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATTGE--------------------GLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~G~--------------------~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
..++.+.|-. +..+++..+||-|.+-++++|+.
T Consensus 355 -l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 407 (408)
T 1j3n_A 355 -LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 407 (408)
T ss_dssp -HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred -HhcCCCCCCCCCCCCCCCCCcccCCCCcCCCCCEEEEecccCCcceEEEEEec
Confidence 1112221100 01678889999999999999874
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-19 Score=176.95 Aligned_cols=269 Identities=16% Similarity=0.097 Sum_probs=181.4
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------C---------CCc
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-----------------D---------MPG 134 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-----------------~---------~p~ 134 (390)
+..|.....+...+|+.+|+++||+++|+++++|| .|+++++++ + . ...
T Consensus 66 ~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 145 (416)
T 1e5m_A 66 LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANM 145 (416)
T ss_dssp SCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTH
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHH
Confidence 34566666677889999999999999999999999 788887653 1 1 124
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------cC---------
Q 036844 135 ADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------FH--------- 194 (390)
Q Consensus 135 ~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~~--------- 194 (390)
.+.+|+..||+.. + ++.++.+|+|++.||+.|..+|++|.++.+|++++|.. +.. +.
T Consensus 146 ~a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~ 222 (416)
T 1e5m_A 146 ASGLTAINLGAKG-P--NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHA 222 (416)
T ss_dssp HHHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGT
T ss_pred HHHHHHHHhCCCC-c--eeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccc
Confidence 7899999999975 3 78899999999999999999999999999999999973 321 00
Q ss_pred -CCCccchhhhhhhhhhccCcEEEEeccCCCCC-ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHH
Q 036844 195 -EPSETHLDVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIG 272 (390)
Q Consensus 195 -~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 272 (390)
.|.+. ...++++||||+|+||++.+.-. .......++.+.+......+ +. .+.. ..
T Consensus 223 ~rpfd~----~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~---~~------------~p~~---~~ 280 (416)
T 1e5m_A 223 SRPFDK----DRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYH---IT------------APVP---DG 280 (416)
T ss_dssp CCTTBT----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SS------------SCCT---TC
T ss_pred cccCcc----CCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCC---CC------------CCCC---CH
Confidence 11111 12478999999999998753200 00011234444332211110 00 0100 01
Q ss_pred HhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 273 KYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 273 ~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
....++++++|+++|+++ +|| ++.+|+.+..+.+ .+.+.++...+++..+ .+...+||+.+|+-.+.+..++
T Consensus 281 ~~~~~ai~~al~~agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAaG~~~~i~~~ 358 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATV 358 (416)
T ss_dssp HHHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCH-hHCCEEEEECCCCcCcCHHHHHHHHHHHcccCCCCeee-CcchhhcccHHHHHHHHHHHHH
Confidence 345678999999999997 999 9999999887544 4556676554454432 1355689999998777665554
Q ss_pred HhhhhhccccCC---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 347 KKSFEERKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 347 ~~~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.. ..++.+.|- .+.++++..+||.|.+-.+++|+.
T Consensus 359 ~~-l~~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~n~~~vl~~ 414 (416)
T 1e5m_A 359 MA-IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 414 (416)
T ss_dssp HH-HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred HH-HhcCCcCCCCCCCCCCCCCCccccCCccccCCCCEEEEccccCCCeeEEEEEEe
Confidence 32 111322100 001577888999999988888874
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1e-19 Score=179.86 Aligned_cols=293 Identities=11% Similarity=-0.025 Sum_probs=175.5
Q ss_pred CCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhh--cCCccccc-cccchhhhhhCCCccCCCCCChHHHHHHHHhhH
Q 036844 21 TPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICE--RQPINKRY-FHLTEEILKENPNMCCYNAPSLDARQAMLIDEV 97 (390)
Q Consensus 21 ~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~GI~~R~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (390)
=|+++++|+++.+.......+ ..+|.. ++++.+|+ .+.+++ ++
T Consensus 10 ~P~~~~~n~~~~~~~~~~~~~---------~v~Ivg~~rt~~g~~~~~~~~~~-------------------------~~ 55 (418)
T 2iik_A 10 GVDLGTENLYFQSMAPQASAA---------DVVVVHGRRTAICRAGRGGFKDT-------------------------TP 55 (418)
T ss_dssp -----------------CCTT---------CEEEEEEEECCCEETTTSTTTTC-------------------------CH
T ss_pred CCCccccHHHHHHHhhhccCC---------CeEEEeeeecCceecCCCCCCCC-------------------------CH
Confidence 499999999998764210001 123443 66776643 333333 38
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCC-CccccceeeccccchHHHHHHHHHHHHHc
Q 036844 98 PKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLK-PSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~-~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
.+|+.+|+++||+++|+++++||.|+++++++ +..|..+..++..||++ ..+ +++++.+|+|++.||..|..+|++
T Consensus 56 ~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~p--~~~v~~aCss~~~Al~~A~~~I~~ 133 (418)
T 2iik_A 56 DELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVP--LSTVNRQCSSGLQAVASIAGGIRN 133 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC--EEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCce--EEEeCCCCHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999998887 55677888899999995 333 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c-------------------------------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD-F------------------------------------------------------------- 193 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~------------------------------------------------------------- 193 (390)
|..+.||++++|.++.. +
T Consensus 134 G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~ 213 (418)
T 2iik_A 134 GSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCF 213 (418)
T ss_dssp TSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCcc
Confidence 99999999999987631 0
Q ss_pred CCC----------------------Cccch--------------hh------hhhhhhhccCcEEEEeccCCCCCc--cc
Q 036844 194 HEP----------------------SETHL--------------DV------LVVQAVFGDGAGAAIIGAGPDISN--HE 229 (390)
Q Consensus 194 ~~~----------------------~~~~~--------------~~------~~~~~lfGDgAaA~vl~~~~~~~~--~~ 229 (390)
.++ ++..+ -+ ...++.++|||+|+||.+.+. .. ..
T Consensus 214 ~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~-A~~~g~ 292 (418)
T 2iik_A 214 QAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSK-AEELGL 292 (418)
T ss_dssp TTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHH-HHHHTC
T ss_pred ccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCceeeccccCCCCCceEEEEecHHH-HHhcCC
Confidence 000 00000 00 013567789999999987542 10 00
Q ss_pred cceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHH
Q 036844 230 RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ 308 (390)
Q Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~ 308 (390)
.+..++.+.+... ..++.+. .....+++++|+++|+++ +|| +|=.|-.....--.
T Consensus 293 ~~~a~i~g~~~~~--------------------~~p~~~~---~~~~~a~~~al~~Agl~~-~dId~vE~h~af~~~~~~ 348 (418)
T 2iik_A 293 PILGVLRSYAVVG--------------------VPPDIMG---IGPAYAIPVALQKAGLTV-SDVDIFEINEAFASQAAY 348 (418)
T ss_dssp CCCEEEEEEEEEE--------------------CCGGGGG---GHHHHHHHHHHHHHTCCG-GGEEEEEECCSBHHHHHH
T ss_pred CceEEEEEEEecc--------------------CCchhcc---hhHHHHHHHHHHHcCCCH-HHCCeeeeeccchHHHHH
Confidence 1122333322110 0111111 122458899999999997 999 99999765543334
Q ss_pred HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCc-eEEEEEEcccccceeeeeEe
Q 036844 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLD-CGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 309 ~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d-~vll~~~G~G~~~ga~ll~~ 382 (390)
..+.||++.+++..+ --+..+||..+|+-...+.+++.+-. + +.| . +.+....+.|....+++++.
T Consensus 349 ~~~~lg~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~~~~L~--~--~~~---~~~gl~~~c~ggG~g~a~~~e~ 415 (418)
T 2iik_A 349 CVEKLRLPPEKVNPL-GGAVALGHPLGCTGARQVITLLNELK--R--RGK---RAYGVVSMCIGTGMGAAAVFEY 415 (418)
T ss_dssp HHHHHTCCGGGBCTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTS---CEEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHcCCCccccCCC-CCeeeecCChhhhHHHHHHHHHHHHH--h--cCC---CeeeEEEEeeccchhheEEEec
Confidence 467899987776542 00146899988885555554444311 1 122 3 33443333333446777775
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.5e-19 Score=178.22 Aligned_cols=271 Identities=15% Similarity=0.067 Sum_probs=178.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCC-CCcC----EEEEEecCC-C-------------------------CCC-cH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSV-SKIT----HLIFSAFYG-V-------------------------DMP-GA 135 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~-~~Id----~li~~s~~~-~-------------------------~~p-~~ 135 (390)
.|.....+...+|+.+|+++||+++|+++ ++|| .|+++++++ + ..+ ..
T Consensus 88 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 167 (438)
T 2iwz_A 88 KSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMA 167 (438)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHH
Confidence 34444556788999999999999999998 8887 577777653 2 123 47
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------cC---CCCcc--
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------FH---EPSET-- 199 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~~---~~~~~-- 199 (390)
+.+|+..||+.. + ++.++.+|++++.||..|..+|++|.++.|||+++|.. +.. +. +|+..
T Consensus 168 a~~ia~~lgl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~ 244 (438)
T 2iwz_A 168 AGQVSIRYKLKG-P--NHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTNSDPKLACR 244 (438)
T ss_dssp HHHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSCTTTSCC
T ss_pred HHHHHHHhCCCC-c--eeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCCCCCCcccc
Confidence 899999999986 4 78999999999999999999999999999999999973 210 00 01100
Q ss_pred chhhhhhhhhhccCcEEEEeccCCCCC-ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHH
Q 036844 200 HLDVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKC 278 (390)
Q Consensus 200 ~~~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~ 278 (390)
..+....++++||||+|+||++.+.-. .......++.+.+....... +. .+.. ......++
T Consensus 245 pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~---~t------------~p~~---~~~~~~~a 306 (438)
T 2iwz_A 245 PFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGH---IT------------APDP---EGEGALRC 306 (438)
T ss_dssp TTCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---SS------------SCCT---TCHHHHHH
T ss_pred cCCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCC---CC------------CCCC---CHHHHHHH
Confidence 001112478999999999998743200 00011234443322211100 00 0100 11345678
Q ss_pred HHHhhccCCCCCCCce-eEEEcCCCHHHH-----HHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhh
Q 036844 279 LSNAMSPIGISDWNSL-FYVLHPGGDGLI-----DQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEE 352 (390)
Q Consensus 279 i~~~L~~~gl~~~~di-~~i~h~~~~~~~-----~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~ 352 (390)
++++|+++|+++ +|| ++.+|+.+..+- +.+.+.++...+++..+ .+...+||+.+|+-++.|..++.. ...
T Consensus 307 i~~Al~~Agl~p-~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~-s~K~~~GH~~gAaG~~~li~~~l~-l~~ 383 (438)
T 2iwz_A 307 MAAALKDAGVQP-EEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVS-STKGATGHLLGAAGAVEAAFTTLA-CYY 383 (438)
T ss_dssp HHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGTSEEE-CCHHHHCBCGGGHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHcCCCH-HHcCEEEecCCCCcccCHHHHHHHHHHHhccCCCccee-cchhhhcCCHHHHHHHHHHHHHHH-Hhc
Confidence 999999999997 999 999999997763 34555666544454432 135567999999888776655532 111
Q ss_pred cccc------------------------CCCCCceEEEEEEcccccceeeeeEe
Q 036844 353 RKAT------------------------TGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 353 g~i~------------------------~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.+. +..+..+++.-+||.|.+-.+++|+.
T Consensus 384 ~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 437 (438)
T 2iwz_A 384 QKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGTNATLCIAG 437 (438)
T ss_dssp TEECCBTTCSCCCTTCCSBCCBSSCEECCCSSSCEEEEEEEETTTEEEEEEEEC
T ss_pred CccCCCCCCCCCCCCCCccccCCCcccCCCCCccEEEEecCcCCCeeEEEEEee
Confidence 3221 10012567888999999988888874
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-19 Score=175.69 Aligned_cols=267 Identities=15% Similarity=0.099 Sum_probs=184.8
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCC-cC----EEEEEecC--------------------------C-CCCCcH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSK-IT----HLIFSAFY--------------------------G-VDMPGA 135 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~-Id----~li~~s~~--------------------------~-~~~p~~ 135 (390)
.|.....+....|+.+|+++||+++|+++++ || .|+++++. + ...+..
T Consensus 78 ~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T 3kzu_A 78 PKEQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLA 157 (428)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhH
Confidence 3444445567899999999999999999998 87 57776652 2 334567
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccc---------------cc-c------
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRV---------------LD-F------ 193 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s---------------~~-~------ 193 (390)
+.+|+..||+.. + ++.++.+|+|++.||..|..+|++|.++.|||+++|... .. .
T Consensus 158 a~~is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 234 (428)
T 3kzu_A 158 SGHVSIKHKLRG-P--NHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAA 234 (428)
T ss_dssp HHHHHHHHTCCS-C--EECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGT
T ss_pred HHHHHHHcCCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccc
Confidence 899999999986 3 788999999999999999999999999999999999831 10 0
Q ss_pred CCCCccchhhhhhhhhhccCcEEEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHH
Q 036844 194 HEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAI 271 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 271 (390)
..|-+ ....++++||||+|+||++.+. .. .......+.+.+.... +.... .+.. .
T Consensus 235 ~~pfd----~~~~G~v~gdGAaavvL~~~~~-A~~~g~~i~a~i~g~~~~~d--------------g~~~~-~p~~---~ 291 (428)
T 3kzu_A 235 SRPYD----EDRDGFVMGEGAGIVVLEELEH-ALARGAKIYAEVIGYGMSGD--------------AFHIT-APTE---S 291 (428)
T ss_dssp CCTTB----TTCCSBCBBCEEEEEEEEEHHH-HHHHTCCCCEEEEEEEEEEC--------------CSCSS-SCCT---T
T ss_pred cCCcc----cCCCceeecCceEEEEEccHHH-HHhCCCceEEEEEEEEEccC--------------CCCCC-CCCC---C
Confidence 00111 1234789999999999987432 10 0011234443322111 10000 0110 1
Q ss_pred HHhHHHHHHHhhccCCCCCCCce-eEEEc----CCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 272 GKYIGKCLSNAMSPIGISDWNSL-FYVLH----PGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 272 ~~~~~~~i~~~L~~~gl~~~~di-~~i~h----~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
.....++++++|+++|+++ +|| ++.+| +++...++.+.+.++.+.+++..+ .....+||+.+|+-.+.+..++
T Consensus 292 ~~~~~~ai~~al~~Agl~~-~dId~ve~HgtgT~~d~~e~~al~~~~g~~~~~~~v~-s~k~~~GH~~gAsG~~~~i~~~ 369 (428)
T 3kzu_A 292 GEGAQRCMVAALKRAGIVP-DEIDYINAHGTSTMADTIELGAVERVVGEAAAKISMS-STKSSIGHLLGAAGAAEAVFST 369 (428)
T ss_dssp CHHHHHHHHHHHHHHTCCG-GGCCEEECCCCSSTTHHHHHHHHHHHHGGGGGGCEEE-CTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCH-HHeeEEEecCCcchhhHHHHHHHHHHhccCCCceeeC-CchhhhCCCchhhHHHHHHHHH
Confidence 1234578899999999997 999 99999 888888889999999887776653 2467899999888777776655
Q ss_pred HhhhhhccccC-----------------C----CCCceEEEEEEcccccceeeeeEee
Q 036844 347 KKSFEERKATT-----------------G----EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 347 ~~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
.. ..++.+.| . .+.++++.-+||.|.+-++++|+..
T Consensus 370 ~~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 426 (428)
T 3kzu_A 370 LA-IRDNIAPATLNLDNPAAQTRIDLVPHKPRERKIDVALSNSFGFGGTNASLVLRRY 426 (428)
T ss_dssp HH-HHHTEECCBTTCSSBSSCCSSBCCBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred HH-hccCccCCCCCCCCCCCCCCcccCCCCCcCCCCCEEEEeCcccChhhEEEEEeec
Confidence 42 11122211 0 0015788889999999999998753
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=175.55 Aligned_cols=253 Identities=11% Similarity=0.054 Sum_probs=168.3
Q ss_pred hHHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~l 172 (390)
++.+|+.+|++++|++ +|++++|||.|++++.++ . ..|.++.+++..+|++.... +++++.+|+|++.||..|..+
T Consensus 31 ~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~~p-a~~v~~~Css~~~Al~~A~~~ 109 (407)
T 3svk_A 31 KPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPETTG-GVQLNRFCASGLEAVNTAAQK 109 (407)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTTCE-EEEEC---CBSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCCCc-eEEecCcChhHHHHHHHHHHH
Confidence 3889999999999999 999999999999998887 3 36889999999999964443 899999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-c----------------------------------------------------------
Q 036844 173 AENNPGARVLVVCSDIRVLD-F---------------------------------------------------------- 193 (390)
Q Consensus 173 l~~g~~~~vLvv~~d~~s~~-~---------------------------------------------------------- 193 (390)
|++|..+.|||+++|.+|.. +
T Consensus 110 I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g 189 (407)
T 3svk_A 110 VRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGG 189 (407)
T ss_dssp HHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999988730 0
Q ss_pred -----------------CCCCccch-----h------------------------------------hhhhhhhhccCcE
Q 036844 194 -----------------HEPSETHL-----D------------------------------------VLVVQAVFGDGAG 215 (390)
Q Consensus 194 -----------------~~~~~~~~-----~------------------------------------~~~~~~lfGDgAa 215 (390)
.+|++.-+ + .....+.++|||+
T Consensus 190 ~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAa 269 (407)
T 3svk_A 190 YFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAA 269 (407)
T ss_dssp TTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-------------CTTTTCSSCCCCCBTTTBCCBEEEEE
T ss_pred CcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccccccccccccccccccccccccCcccCcee
Confidence 00110000 0 0012335889999
Q ss_pred EEEeccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCc
Q 036844 216 AAIIGAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNS 293 (390)
Q Consensus 216 A~vl~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~d 293 (390)
|+||.+.+. .. ...+..++.+.+... .+ +.. .......+++++|+++|+++ +|
T Consensus 270 avvL~s~~~-A~~~g~~~~a~i~g~~~~~----~~----------------p~~---~~~~~~~a~~~al~~Agl~~-~d 324 (407)
T 3svk_A 270 LVLVGSEKA-GKSQGLTPRARIVATATSG----SD----------------PVI---MLTGPTPATRKVLDRAGLTI-DD 324 (407)
T ss_dssp EEEEECHHH-HHHTTCCCCEEEEEEEEC-----------------------------CCCTHHHHHHHHHHHHTCCG-GG
T ss_pred EEEEeeHHH-HHHcCCCCcEEEEEEEEec----cC----------------Ccc---ccHHHHHHHHHHHHHcCCCH-HH
Confidence 999977542 10 001223444332210 00 000 00112367889999999997 99
Q ss_pred e-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEccc
Q 036844 294 L-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPG 372 (390)
Q Consensus 294 i-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G 372 (390)
| +|-+|+..........+.||++.+++..+ -..-.+||...++-...+.+++.+-. + +.+ .+.|....+.|
T Consensus 325 Id~~e~hdaf~~~~l~~~~~lg~~~~~vn~~-Gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~c~gg 396 (407)
T 3svk_A 325 IDLFELNEAFASVVLKFQKDLNIPDEKLNVN-GGAIAMGHPLGATGAMITGTMVDELE--R--RNA---RRALITLCIGG 396 (407)
T ss_dssp CSEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCGGGHHHHHHHHHHHHHH--H--HTC---CEEEEEEECSS
T ss_pred CCEEEEeChhHHHHHHHHHHhCCCCCCCCCC-CcHhheeCcHHHHHHHHHHHHHHHHH--h--cCC---CEEEEEeeccC
Confidence 9 99999999888778889999999887653 12345899998886666666555411 1 122 56666555656
Q ss_pred ccceeeeeEe
Q 036844 373 LTVETVVLQS 382 (390)
Q Consensus 373 ~~~ga~ll~~ 382 (390)
....+++|+.
T Consensus 397 G~g~a~~~e~ 406 (407)
T 3svk_A 397 GMGVATIIER 406 (407)
T ss_dssp SCEEEEEEEE
T ss_pred cceEEEEEEc
Confidence 6666777764
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-18 Score=173.34 Aligned_cols=261 Identities=16% Similarity=0.116 Sum_probs=173.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C---------------------C----CC-cHHHHHHHHc
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V---------------------D----MP-GADVRLVKLL 143 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~---------------------~----~p-~~a~~v~~~l 143 (390)
+...+|+.+|+++||+++|+++++|| .|+++++++ + . .+ ..+.+|+..|
T Consensus 91 d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 170 (430)
T 1ox0_A 91 DNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRF 170 (430)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHh
Confidence 34679999999999999999999999 588877653 1 1 12 4788999999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCC----CCcc--chhhhhhh
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHE----PSET--HLDVLVVQ 207 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~----~~~~--~~~~~~~~ 207 (390)
|+.. + ++.++.+|++++.||..|..+|++|.++.|||+++|..... ..+ |... ..+....+
T Consensus 171 gl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~p~~~~~pFd~~~~g 247 (430)
T 1ox0_A 171 GANG-V--CKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALSTTEDPTRASIPFDKDRNG 247 (430)
T ss_dssp TCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCSSTTSSSCTTBTTCCS
T ss_pred cCCC-c--eEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccCCCCCCCCCCCCCCCCCC
Confidence 9986 4 78999999999999999999999999999999999985311 111 1100 00112247
Q ss_pred hhhccCcEEEEeccCCCCC--ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhcc
Q 036844 208 AVFGDGAGAAIIGAGPDIS--NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSP 285 (390)
Q Consensus 208 ~lfGDgAaA~vl~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 285 (390)
+++||||+|+||++.+. . .......++.+.+....... +. .+.. ......++++++|++
T Consensus 248 ~~~geGAaavvL~~~~~-A~~~g~~i~a~I~g~~~~~dg~~---~~------------~p~~---~~~~~~~ai~~al~~ 308 (430)
T 1ox0_A 248 FVMGEGSGMLVLESLEH-AEKRGATILAEVVGYGNTCDAYH---MT------------SPHP---EGQGAIKAIKLALEE 308 (430)
T ss_dssp BCBCCEEEEEEEEEHHH-HHHTTCCCCEEEEEEEEEECCSC---SS------------SCCT---TCHHHHHHHHHHHHH
T ss_pred ccccceEEEEEECcHHH-HHhCCCceEEEEEEEEEecCCCC---CC------------CCCC---ChHHHHHHHHHHHHH
Confidence 89999999999987532 1 00011234443322211100 00 0100 113456789999999
Q ss_pred CCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccC--
Q 036844 286 IGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATT-- 357 (390)
Q Consensus 286 ~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~-- 357 (390)
+|+++ +|| +|.+|+.+....+ .+.+.+|-+. .+.. +-..+||+.+|+-.+.+..++.. ..++.+.|
T Consensus 309 Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~-~v~s---~k~~~GH~~gAaG~~~~i~~~~~-l~~~~ipp~~ 382 (430)
T 1ox0_A 309 AEISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGKEV-PVSS---TKSFTGHLLGAAGAVEAIVTIEA-MRHNFVPMTA 382 (430)
T ss_dssp HTCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCSSS-EEEC---THHHHCBCGGGHHHHHHHHHHHH-HHHTEECCBS
T ss_pred hCcCH-HHcCEEEEeCCcCcccCHHHHHHHHHHhCCCc-eecc---cccccccchhhHHHHHHHHHHHH-HhcCccCCCC
Confidence 99997 999 9999999987665 3445555321 1111 24458999999877766655432 11132210
Q ss_pred ---------------C----CCCceEEEEEEcccccceeeeeEee
Q 036844 358 ---------------G----EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 358 ---------------G----~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
. .+..+++..+||.|.+-.+++|+..
T Consensus 383 ~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~ 427 (430)
T 1ox0_A 383 GTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 427 (430)
T ss_dssp SCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCcccCCCCCcCCCCCEEEEeCccCCCceEEEEEeec
Confidence 0 0115788899999999999998753
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-18 Score=169.81 Aligned_cols=226 Identities=13% Similarity=0.039 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEW-GQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
..+|+.+|+++||+++ |+++++||.|++++.++ .. .|.++.+++..+|++.... +++++.+|+|++.||++|..+|
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p-~~~v~~aCss~l~Al~~A~~~I 105 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPHSVP-AVTVNRLCGSSMQALHDAARMI 105 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCTTSC-CEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCCCCc-EeEecCcchHHHHHHHHHHHHH
Confidence 8899999999999999 99999999999999887 44 7889999999999974433 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc------------------------------------------------------------c
Q 036844 174 ENNPGARVLVVCSDIRVLD------------------------------------------------------------F 193 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~~------------------------------------------------------------~ 193 (390)
++|..+.|||+++|.+|.. |
T Consensus 106 ~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f 185 (387)
T 3goa_A 106 MTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAF 185 (387)
T ss_dssp HTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCc
Confidence 9999999999999987631 1
Q ss_pred CC------------------CCcc-----------------ch----hhhhhhhhhccCcEEEEeccCCCCC-cccccee
Q 036844 194 HE------------------PSET-----------------HL----DVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLF 233 (390)
Q Consensus 194 ~~------------------~~~~-----------------~~----~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~ 233 (390)
.+ +++. ++ -.....+..+|||+|+||.+.+.-. ....+..
T Consensus 186 ~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a 265 (387)
T 3goa_A 186 KTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRA 265 (387)
T ss_dssp TTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCE
T ss_pred ccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccE
Confidence 00 0000 00 0012344678999999998753200 0011223
Q ss_pred EEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHH
Q 036844 234 QVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKN 312 (390)
Q Consensus 234 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~ 312 (390)
.+.+.+.... ++... ......+++++|+++|+++ +|| ++-+|...........+.
T Consensus 266 ~i~g~~~~~~--------------------~~~~~---~~~~~~a~~~al~~agl~~-~did~ve~h~~f~~~~~~~~~~ 321 (387)
T 3goa_A 266 RIRSMAVVGC--------------------DPSIM---GYGPVPASKLALKKAGLSA-SDIDVFEMNEAFAAQILPCIKD 321 (387)
T ss_dssp EEEEEEEEEC--------------------CTTST---TCTHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHH
T ss_pred EEEEEEEcCC--------------------CCCcc---hHHHHHHHHHHHHHcCCCH-HHcCEEEEeCcchHHHHHHHHH
Confidence 4544332211 01100 0122567889999999997 999 999999998877778899
Q ss_pred cCC---CcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 313 LGL---GKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 313 lgi---~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
||+ +.+++..+ -....+||+.+|+-...+.+++.+
T Consensus 322 lg~~~~~~~~vn~~-gg~~~~GH~~gasG~~~~~~~~~~ 359 (387)
T 3goa_A 322 LGLMEQIDEKINLN-GGAIALGHPLGCSGARISTTLINL 359 (387)
T ss_dssp TTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred hCCCcCCCccCCCC-CchhcccCCHHHHHHHHHHHHHHH
Confidence 998 55555432 123458999777766665555543
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=6.1e-18 Score=167.23 Aligned_cols=253 Identities=12% Similarity=0.052 Sum_probs=172.2
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCCcHHHHHHHHc
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V--------------------------DMPGADVRLVKLL 143 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~--------------------------~~p~~a~~v~~~l 143 (390)
+....|+.+|+++||+++|+++++|| .|+++++++ + ..+..+.+|+..|
T Consensus 77 d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 156 (415)
T 1tqy_B 77 DPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRH 156 (415)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHh
Confidence 45789999999999999999999999 888888743 2 2356889999999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-ccc----------c---------CCCCccchhh
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VLD----------F---------HEPSETHLDV 203 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~~----------~---------~~~~~~~~~~ 203 (390)
|++. + ++.++.+|++++.||..|..+|++| ++.+|++++|.+ +.. + ..|.+ .
T Consensus 157 gl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~pfd----~ 228 (415)
T 1tqy_B 157 GMRG-P--SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRISTATDPDRAYLPFD----E 228 (415)
T ss_dssp TCCS-S--CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCCCSCGGGSCCTTS----T
T ss_pred CCCC-c--eEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccCCCCCCCCcCCCC----C
Confidence 9975 3 7899999999999999999999999 999999999983 210 0 01111 1
Q ss_pred hhhhhhhccCcEEEEeccCCCCCc--cc-cceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHH
Q 036844 204 LVVQAVFGDGAGAAIIGAGPDISN--HE-RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLS 280 (390)
Q Consensus 204 ~~~~~lfGDgAaA~vl~~~~~~~~--~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 280 (390)
...++++||||+|+||++.+. .. .. ....++.+.+... ++..+ ..+.. ...++++
T Consensus 229 ~~~G~~~geGaaavvL~~~~~-A~~~g~~~i~a~I~g~~~~~--------------dg~~~-~~p~~------~~~~ai~ 286 (415)
T 1tqy_B 229 RAAGYVPGEGGAILVLEDSAA-AEARGRHDAYGELAGCASTF--------------DPAPG-SGRPA------GLERAIR 286 (415)
T ss_dssp TCCCBCBBCEEEEEEEEEHHH-HHHHTCCCCSEEEEEEEEEE--------------CCCTT-CCCCC------SHHHHHH
T ss_pred CCCCcceeeeEEEEEECcHHH-HHHCCCCceEEEEEEEEEcc--------------CCCCC-CCCCH------HHHHHHH
Confidence 124789999999999987532 10 00 1123444332211 11100 01111 3567889
Q ss_pred HhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 281 NAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 281 ~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
++|+++|+++ +|| ++.+|..+..+-+. +.+.++-..-.+.. .-..+||+.+|+-.+.+..++.. .+++.
T Consensus 287 ~al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~g~~~~~v~s---~K~~~GH~~gAaG~~~~~~~~~~-l~~~~ 361 (415)
T 1tqy_B 287 LALNDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGREGVPVTV---PKTTTGRLYSGGGPLDVVTALMS-LREGV 361 (415)
T ss_dssp HHHHHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTTCSEEEC---GGGGTCBCGGGHHHHHHHHHHHH-HHHTS
T ss_pred HHHHHcCCCH-hHCCEEEEeCCCCcCcCHHHHHHHHHHhCCCCceEec---cchhhccChHHHHHHHHHHHHHH-HhcCC
Confidence 9999999997 999 99999988765443 34445532111111 23457999999877776655542 11121
Q ss_pred cc----------------------C-CCCCceEEEEEEcccccceeeeeEeec
Q 036844 355 AT----------------------T-GEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 355 i~----------------------~-G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+. + + ..+++..+||.|.+-++++|+..+
T Consensus 362 ipp~~~~~~~~p~~~~~~v~~~~~~~~--~~~a~~~sfGfgG~n~~~vl~~~~ 412 (415)
T 1tqy_B 362 IAPTAGVTSVPREYGIDLVLGEPRSTA--PRTALVLARGRWGFNSAAVLRRFA 412 (415)
T ss_dssp BCCBCSCCCCCGGGCCEECBSSCBCCC--CSEEEEEEEETTTEEEEEEEEEC-
T ss_pred cCCCCCCCCCCCCCCccccCCCCccCC--CCEEEEecCcCCCeEEEEEEecCC
Confidence 10 0 1 267899999999999999997643
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.5e-18 Score=170.57 Aligned_cols=271 Identities=13% Similarity=0.079 Sum_probs=177.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCc-C----EEEEEecCC---------------------------CCCCcH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKI-T----HLIFSAFYG---------------------------VDMPGA 135 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~I-d----~li~~s~~~---------------------------~~~p~~ 135 (390)
.|.....+....|+.+|+++||+++|+++++| | .|+++++.. ...+..
T Consensus 93 ~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (451)
T 4ddo_A 93 HKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLA 172 (451)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchH
Confidence 34444455688999999999999999999999 7 677777521 133457
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------------------c
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------------------F 193 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------------------~ 193 (390)
+.+|+..||+.. + ++.++.+|+|++.||..|..+|++|.++.|||+++|..+.. .
T Consensus 173 a~~ia~~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 249 (451)
T 4ddo_A 173 AGQISIKHRFRG-P--LGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRA 249 (451)
T ss_dssp HHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGS
T ss_pred HHHHHHHhcCCC-c--eeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCcccc
Confidence 899999999976 4 78999999999999999999999999999999999986410 0
Q ss_pred CCCCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHH
Q 036844 194 HEPSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIG 272 (390)
Q Consensus 194 ~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 272 (390)
..|.+. ...++++||||+|+||++.+.- ........++.+.+....+.. + .... + ..
T Consensus 250 ~~pfd~----~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~-----------~~~~--~--~~ 307 (451)
T 4ddo_A 250 SRPFDR----DRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYH---M-----------TAGP--D--DG 307 (451)
T ss_dssp CCTTBT----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC---S-----------SCCC--T--TC
T ss_pred cccccc----CCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCc---c-----------CCCC--C--CH
Confidence 011111 1247889999999999874320 000112234544332221110 0 0000 0 01
Q ss_pred HhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHH
Q 036844 273 KYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVR 346 (390)
Q Consensus 273 ~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~ 346 (390)
....++++++|+++|+++ +|| ++.+|..+..+.+ .+.+.++.. .++..+ ..-..+||+.+|+-.+.|..++
T Consensus 308 ~~~~~ai~~al~~Agl~~-~dId~ve~Hgtgt~~~d~~E~~al~~~~~~~-~~~~v~-s~k~~~GH~~gAaG~~~~i~~~ 384 (451)
T 4ddo_A 308 SGAMRAMKLALRMGDVAP-EQVDYVNAHATSTPVGDAGEIEALKTVFGVG-AGPAIS-STKSATGHLLGAAGAIEAAFSI 384 (451)
T ss_dssp HHHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHCSS-SSCEEE-CTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCH-HHcCEEEecCCcCcccCHHHHHHHHHHhCCC-CCCccc-CchhhhccCHHHHHHHHHHHHH
Confidence 234578899999999997 999 9999988766543 344555542 222211 1345679999998776665544
Q ss_pred HhhhhhccccC------------------C----CCCceEEEEEEcccccceeeeeEeecCCC
Q 036844 347 KKSFEERKATT------------------G----EGLDCGVLFGCGPGLTVETVVLQSFPIDS 387 (390)
Q Consensus 347 ~~~~~~g~i~~------------------G----~~~d~vll~~~G~G~~~ga~ll~~~~~~~ 387 (390)
.. .+++.+.+ . .+..+++.-+||.|.+-++++|+..+.+.
T Consensus 385 ~~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~sfgfgG~na~~vl~~~~~~~ 446 (451)
T 4ddo_A 385 LA-LRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRRYPSDR 446 (451)
T ss_dssp HH-HHHTEECCCTTCSSBCGGGTTSEECCSSCEECCCSEEEEEEEETTTEEEEEEEEESCC--
T ss_pred HH-HhcCCcCCCCCCCCCCcccccccccCCCCCCCCcCEEEEeeEcCCCceEEEEEeeCCCCC
Confidence 32 11121110 0 00156788899999999999998876543
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-17 Score=160.63 Aligned_cols=263 Identities=11% Similarity=0.074 Sum_probs=176.7
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCC-CCCCcC----EEEEEecCC---------------------------CCCCc
Q 036844 87 DARQAMLIDEVPKLGKEAALKAIKEWGQ-SVSKIT----HLIFSAFYG---------------------------VDMPG 134 (390)
Q Consensus 87 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~-~~~~Id----~li~~s~~~---------------------------~~~p~ 134 (390)
..|.....+...+|+.+|+++||+++|+ ++++|| .|+++++.. ...+.
T Consensus 67 ~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (412)
T 4ewg_A 67 PRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHT 146 (412)
T ss_dssp CHHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTH
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccH
Confidence 3444445566889999999999999999 788888 888877652 12346
Q ss_pred HHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c-----CC----------
Q 036844 135 ADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-----HE---------- 195 (390)
Q Consensus 135 ~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----~-----~~---------- 195 (390)
.+.+|+..||+.. + ++.++.+|+|++.||..|.++|++|.++.+||+++|..+.. | ..
T Consensus 147 ~a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~~~~~~~~~~~~l~~~~~~p~~~~ 223 (412)
T 4ewg_A 147 TAVNVSLFWDLKG-R--IVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSGPAVAVFDTLYATSTRNDEPHLTP 223 (412)
T ss_dssp HHHHHHHHTTCCS-C--EEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHTTTCBCCCTTCGGGCC
T ss_pred HHHHHHHHhCCCC-C--cccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHhhccccCCCCCCCCC
Confidence 7899999999986 4 78999999999999999999999999999999999986521 1 00
Q ss_pred -CCccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHH
Q 036844 196 -PSETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGK 273 (390)
Q Consensus 196 -~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 273 (390)
|.| ....++++||||+|+||++.+.- ........++.+.+... ++..++ .+ ...
T Consensus 224 rpfd----~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~--------------dg~~~~-~p-----~~~ 279 (412)
T 4ewg_A 224 RPFD----AKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNS--------------DGAHMT-QP-----TAS 279 (412)
T ss_dssp CTTB----TTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CSSCSS-SC-----CHH
T ss_pred CCCC----CCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcC--------------CCCCCC-CC-----CHH
Confidence 111 12247889999999999874320 00001123444332221 111000 11 134
Q ss_pred hHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 274 YIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 274 ~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
...++++++|+++|+++ +|| ++.+|..+..+-+. +.+.++-.. .+.. +-..+||+.+|+-.+.+..++.
T Consensus 280 ~~~~ai~~Al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~~~~~~-~v~s---~K~~~GH~~gAsG~~~~~~~~~ 354 (412)
T 4ewg_A 280 TMARAMQLALEDAKLDA-NAIAYVNAHGTSTDRGDVAESQATARTFGERM-PISS---LKSYVGHTLGACGALEAWWTIE 354 (412)
T ss_dssp HHHHHHHHHHHHTTCCG-GGEEEEECCCCCCHHHHHHHHHHHHHHHCTTC-EEEC---THHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEccCCCCccccHHHHHHHHHHcCCCC-eeeC---ccccccccHHHHHHHHHHHHHH
Confidence 56788999999999997 999 99999988776553 345555221 1111 2445799999986666554443
Q ss_pred hhhhhccccC---------C-------------CCCceEEEEEEcccccceeeeeEe
Q 036844 348 KSFEERKATT---------G-------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 348 ~~~~~g~i~~---------G-------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
. .+++.+.+ . .+.++++..+||-|.+-++++|+.
T Consensus 355 ~-l~~~~ipp~~~~~~~~p~~~~~~~v~~~~~~~~~~~~~~~sfgfGG~na~~vl~~ 410 (412)
T 4ewg_A 355 M-MKRNWYAPTLNLTEVDPACAPLDYIRGEARAIDAEYVMSNNFAFGGINTSLIFRR 410 (412)
T ss_dssp H-HHHTEECCCTTCCSBCTTSCCCEECCSSCEECCCSEEEEEEEEGGGEEEEEEEEC
T ss_pred H-HhcCCcCCCCCCCCCCCcccccccccCcccCCCCCEEEEeeecCCcceEEEEEee
Confidence 2 00022211 0 001678899999999999999975
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=164.06 Aligned_cols=252 Identities=15% Similarity=0.054 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+.+|+.+|+++||+++|+++++||.|+++++++ +. .|..+.+|+..||++.... +++++.+|++++.||..|..+|+
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCas~~~Al~~A~~~I~ 104 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-GCTVNRLCGSGLEAVAQAARAIW 104 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCcc-EeeccccchHHHHHHHHHHHHHH
Confidence 889999999999999999999999999998887 44 6889999999999964332 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc-ccC----------------CC-------Ccc--c---------------------hh-----
Q 036844 175 NNPGARVLVVCSDIRVL-DFH----------------EP-------SET--H---------------------LD----- 202 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~-~~~----------------~~-------~~~--~---------------------~~----- 202 (390)
+|..+.||++++|.++. .+. +. .-. + ++
T Consensus 105 ~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~ 184 (401)
T 1ulq_A 105 AGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRF 184 (401)
T ss_dssp TTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHH
Confidence 99999999999998763 110 00 000 0 00
Q ss_pred ----------h------------------------------------------h--h--hhhh-------hccCcEEEEe
Q 036844 203 ----------V------------------------------------------L--V--VQAV-------FGDGAGAAII 219 (390)
Q Consensus 203 ----------~------------------------------------------~--~--~~~l-------fGDgAaA~vl 219 (390)
+ + + .+++ ++|||+|+||
T Consensus 185 a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpif~~~G~vt~~~~~~~~dGAaavvL 264 (401)
T 1ulq_A 185 ALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLL 264 (401)
T ss_dssp HHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHHSCBSSSTTCSCBGGGBCCCEEEEEEEEE
T ss_pred HHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHhhCCCccCCCCCeechhcCCccchheEEEE
Confidence 0 0 0 0122 5999999999
Q ss_pred ccCCCCCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eE
Q 036844 220 GAGPDISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FY 296 (390)
Q Consensus 220 ~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 296 (390)
.+.+. .. ...+..++.+.+.... .+..+ ......+++++|+++|+++ +|| +|
T Consensus 265 ~s~~~-A~~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~i 319 (401)
T 1ulq_A 265 VSDDY-AKAHGLRPLARVRAIAVAGV--------------------PPRIM---GIGPVPATRKALERAGLSF-SDLGLI 319 (401)
T ss_dssp EEHHH-HHHTTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHTTCCG-GGCSEE
T ss_pred ecHHH-HHHcCCCceEEEEEEEEecC--------------------Ccccc---chhHHHHHHHHHHHcCCCH-HHcCEE
Confidence 86542 10 0112244554332210 01111 1223568899999999997 999 99
Q ss_pred EEcCCCHHHHHHHHHHcCC--CcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEccccc
Q 036844 297 VLHPGGDGLIDQVEKNLGL--GKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLT 374 (390)
Q Consensus 297 i~h~~~~~~~~~~~~~lgi--~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~ 374 (390)
=.|-......-...+.||+ +.+++..+ --...+||..+|+-...+.+++.+-. + +.+ ++.|..++|.|..
T Consensus 320 e~heafa~~~l~~~~~lg~~~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~ 391 (401)
T 1ulq_A 320 ELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHEMR--R--RKV---QFGLATMCIGVGQ 391 (401)
T ss_dssp EECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTE
T ss_pred EEecchHHHHHHHHHHcCCCCCCCccCCC-CcccccCCCcchHHHHHHHHHHHHHh--h--cCC---CEEEEEeecCCcc
Confidence 9998776433344567898 55555432 12345899998877776666665411 1 123 5677777777767
Q ss_pred ceeeeeEe
Q 036844 375 VETVVLQS 382 (390)
Q Consensus 375 ~ga~ll~~ 382 (390)
..+++|+.
T Consensus 392 ~~a~v~~~ 399 (401)
T 1ulq_A 392 GIAVVVEG 399 (401)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 77888875
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.8e-17 Score=159.96 Aligned_cols=269 Identities=14% Similarity=0.120 Sum_probs=173.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCC---CCCcCEEEEEecCC-C-----------------C--------CC-cHH
Q 036844 87 DARQAMLIDEVPKLGKEAALKAIKEWGQS---VSKITHLIFSAFYG-V-----------------D--------MP-GAD 136 (390)
Q Consensus 87 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~---~~~Id~li~~s~~~-~-----------------~--------~p-~~a 136 (390)
..|.....+...+|+.+|+++||+++|++ +++|+ |+++++++ + . .+ ..+
T Consensus 89 ~~~~~~~~d~~~~l~l~aa~~ALedAG~~~~~~~~ig-v~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 167 (434)
T 2gp6_A 89 TRIELRRMGYLQRMSTVLSRRLWENAGSPEVDTNRLM-VSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAA 167 (434)
T ss_dssp CHHHHHTCCHHHHHHHHHHHHHHHHTTCCCCCTTSEE-EEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHH
T ss_pred CHHHHHhCCHHHHHHHHHHHHHHHhcCCCccCCCceE-EEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHH
Confidence 34555556678899999999999999984 45555 56666544 3 1 12 468
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cCC-----CCccc
Q 036844 137 VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----------FHE-----PSETH 200 (390)
Q Consensus 137 ~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~~-----~~~~~ 200 (390)
.+|+..||+.. + ++.++.+|++++.||..|..+|++|.++.+|++++|..+.. ..+ |+...
T Consensus 168 ~~is~~lgl~G-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~ 244 (434)
T 2gp6_A 168 AAVGLERHAKA-G--VMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGAC 244 (434)
T ss_dssp HHHHHHSCCCS-C--EECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSC
T ss_pred HHHhhhhcCCC-C--eEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCce
Confidence 89999999974 3 78999999999999999999999999999999999986531 111 11100
Q ss_pred --hhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHH
Q 036844 201 --LDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277 (390)
Q Consensus 201 --~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 277 (390)
.+....++++||||+|+||++.+.- ........++.+.+... ++..+. .+.. ......+
T Consensus 245 ~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------Dg~~~~-~p~~---~~~~~~~ 306 (434)
T 2gp6_A 245 RPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITS--------------DGFHMV-APDP---NGERAGH 306 (434)
T ss_dssp CSSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEE--------------CCSCSS-SCCT---TCHHHHH
T ss_pred ecccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEec--------------CCCCCC-CCCC---ChHHHHH
Confidence 0111247899999999999875320 00001123444332211 110000 0100 1234567
Q ss_pred HHHHhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhh
Q 036844 278 CLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFE 351 (390)
Q Consensus 278 ~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~ 351 (390)
+++++|+++|+++ +|| +|.+|..+..+.+. +.+.++-. ++..+ .....+||+.+|+-++.+..++.. ..
T Consensus 307 ai~~al~~Agl~~-~dId~ve~Hgtgt~~~D~~E~~al~~~fg~~--~~~v~-s~k~~~GH~~gAaG~~~~i~~~~~-l~ 381 (434)
T 2gp6_A 307 AITRAIQLAGLAP-GDIDHVNAHATGTQVGDLAEGRAINNALGGN--RPAVY-APKSALGHSVGAVGAVESILTVLA-LR 381 (434)
T ss_dssp HHHHHHHHTTCCT-TTEEEEECCCCSCHHHHHHHHHHHHHHHTTC--CCEEC-CTHHHHCBCTTTHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHcCCCH-HHcCEEEEeCCcCccchHHHHHHHHHHhccC--CCCcc-cchhhhcCchhhhHHHHHHHHHHH-Hh
Confidence 8999999999997 999 99999877766433 34445421 22221 135679999998877776655442 11
Q ss_pred hccccCC---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 352 ERKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 352 ~g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+.+.|- .+..+++.-+||.|.+-.+++|+.
T Consensus 382 ~~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 433 (434)
T 2gp6_A 382 DQVIPPTLNLVNLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVAIAFGR 433 (434)
T ss_dssp HSCCCCCSSCSSBCTTCCCEECCSSCCCSCCCEEEEEEEETTTEEEEEEEEC
T ss_pred cCccCCCCCCCCCCCCCCccccCCCccCCCCCEEEEeCCcCCCeeEEEEEEe
Confidence 1332210 011567888999999988888864
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=164.06 Aligned_cols=252 Identities=17% Similarity=0.106 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
+.+|+.+|+++||+++|+++++||.++++++.+ +..+..+.+++..+|++.... ++.++.+|++++.||..|..+|++
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaSg~~Ai~~A~~~I~~ 108 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSVP-AWSCQMICGSGLKAVCLAVQSIGI 108 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSC-EEEECCGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCcc-EEEecCcChhHHHHHHHHHHHHHC
Confidence 789999999999999999999999999998887 666889999999999963332 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-cCC-----------------------------------------------------------
Q 036844 176 NPGARVLVVCSDIRVLD-FHE----------------------------------------------------------- 195 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~~~----------------------------------------------------------- 195 (390)
|..+.||++++|.++.. +..
T Consensus 109 G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~ 188 (397)
T 1wl4_A 109 GDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNR 188 (397)
T ss_dssp TSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 99999999999987631 100
Q ss_pred -----------------------------CCccch---------hh-h-hh----hhh-------hccCcEEEEeccCCC
Q 036844 196 -----------------------------PSETHL---------DV-L-VV----QAV-------FGDGAGAAIIGAGPD 224 (390)
Q Consensus 196 -----------------------------~~~~~~---------~~-~-~~----~~l-------fGDgAaA~vl~~~~~ 224 (390)
+++.-+ .. + +. +++ +||||+|+||.+.+.
T Consensus 189 A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~ 268 (397)
T 1wl4_A 189 TENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSE 268 (397)
T ss_dssp HHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHH
T ss_pred HHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHH
Confidence 000000 00 0 00 345 899999999987532
Q ss_pred CCc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCC
Q 036844 225 ISN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPG 301 (390)
Q Consensus 225 ~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~ 301 (390)
.. ...+..++.+.+.... .+..+ ......+++++|+++|+++ +|| +|-+|..
T Consensus 269 -A~~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~d~ 323 (397)
T 1wl4_A 269 -ADKRGLTPLARIVSWSQVGV--------------------EPSIM---GIGPIPAIKQAVTKAGWSL-EDVDIFEINEA 323 (397)
T ss_dssp -HHHTTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCS
T ss_pred -HHHcCCCccEEEEEEEEeec--------------------Chhhc---cchHHHHHHHHHHHcCCCH-HHCCEEEEecc
Confidence 10 0112345554332210 01101 1233568899999999997 999 9999998
Q ss_pred CHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeE
Q 036844 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381 (390)
Q Consensus 302 ~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~ 381 (390)
.......+.+.||++.+++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.|....+.|....+++|+
T Consensus 324 f~~~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e 395 (397)
T 1wl4_A 324 FAAVSAAIVKELGLNPEKVNIE-GGAIALGHPLGASGCRILVTLLHTLE--R--MGR---SRGVAALCIGGGMGIAMCVQ 395 (397)
T ss_dssp BHHHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--HTC---CEEEEEEEETTTEEEEEEEE
T ss_pred cHHHHHHHHHHcCCCCcCcCCC-cCccccCCChhhhHHHHHHHHHHHHh--h--cCC---CEEEEEEecccchheEEEEE
Confidence 8777777889999988777553 24567899999886666666555411 1 123 55565544445555678877
Q ss_pred e
Q 036844 382 S 382 (390)
Q Consensus 382 ~ 382 (390)
.
T Consensus 396 ~ 396 (397)
T 1wl4_A 396 R 396 (397)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=164.08 Aligned_cols=253 Identities=15% Similarity=0.091 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
+..+|+.+|+++||+++|+++++||.++++++.+ ...+..+.+++..+|++.... ++.++.+|++++.||..|...|+
T Consensus 26 ~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaSgl~Al~~A~~~I~ 104 (392)
T 2vu1_A 26 PAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT-AWGMNQLCGSGLRAVALGMQQIA 104 (392)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce-EEEecccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998887 556889999999999986222 78999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc-ccC-C------C-----Cc---------------c-------------chh-----------
Q 036844 175 NNPGARVLVVCSDIRVL-DFH-E------P-----SE---------------T-------------HLD----------- 202 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~-~~~-~------~-----~~---------------~-------------~~~----------- 202 (390)
+|..+.||++++|.++. .+. . . .+ . +++
T Consensus 105 ~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~ 184 (392)
T 2vu1_A 105 TGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQN 184 (392)
T ss_dssp TTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999998753 110 0 0 00 0 000
Q ss_pred -------------------------------h----------------h---hhhhh-------hccCcEEEEeccCCCC
Q 036844 203 -------------------------------V----------------L---VVQAV-------FGDGAGAAIIGAGPDI 225 (390)
Q Consensus 203 -------------------------------~----------------~---~~~~l-------fGDgAaA~vl~~~~~~ 225 (390)
+ + ..+++ +||||+|+||.+.+.
T Consensus 185 ~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~- 263 (392)
T 2vu1_A 185 KAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAE- 263 (392)
T ss_dssp HHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHH-
T ss_pred HHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHH-
Confidence 0 0 11456 999999999987543
Q ss_pred Cc--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCC
Q 036844 226 SN--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGG 302 (390)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~ 302 (390)
.. ...+..++.+.+.... .+..+ ......+++++|+++|+++ +|| +|-+|...
T Consensus 264 A~~~g~~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~agl~~-~dId~ie~~d~f 319 (392)
T 2vu1_A 264 ASRRGIQPLGRIVSWATVGV--------------------DPKVM---GTGPIPASRKALERAGWKI-GDLDLVEANEAF 319 (392)
T ss_dssp HHHHTCCCSEEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCSEEEECCSB
T ss_pred HHhcCCCccEEEEEEEEeec--------------------Chhhc---chhHHHHHHHHHHHcCCCH-HHcCEEEecccc
Confidence 10 0112245554332210 01111 1233568899999999997 999 99999888
Q ss_pred HHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 303 DGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 303 ~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
....-.+.+.||++++++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.|....+.|....+++|+.
T Consensus 320 ~~~~l~~~~~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 320 AAQACAVNKDLGWDPSIVNVN-GGAIAIGHPIGASGARILNTLLFEMK--R--RGA---RKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp HHHHHHHHHHHCCCGGGBSTT-CCHHHHCCCGGGHHHHHHHHHHHHHH--H--HTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcccCCCC-ccHhhhCCChhhHHHHHHHHHHHHHh--c--cCC---CEEEEEEecccchheEEEEEe
Confidence 766666789999998877543 23567899999988877777766411 1 123 455543323344556777764
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.9e-17 Score=161.31 Aligned_cols=249 Identities=14% Similarity=0.093 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
..+|+.+|+++||+++|+++++||.+++++..+ ...+..+.+++..||++.... ++.++.+|++++.||..|..+|++
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p-~~~v~~aCaS~~~Al~~A~~~I~~ 110 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP-CTTINKVCASGMKAIMMASQSLMC 110 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC-EEEEECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce-EEEecccccHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999988887 667889999999999953222 899999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc-c--------------------CCC-----------------Ccc--chhh------------
Q 036844 176 NPGARVLVVCSDIRVLD-F--------------------HEP-----------------SET--HLDV------------ 203 (390)
Q Consensus 176 g~~~~vLvv~~d~~s~~-~--------------------~~~-----------------~~~--~~~~------------ 203 (390)
|..+.+|++++|..+.. + ... ... ++++
T Consensus 111 G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a 190 (395)
T 2ib8_A 111 GHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRS 190 (395)
T ss_dssp TSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999999999986531 1 000 000 0000
Q ss_pred --------------------------------------------------hhhhhh-------hccCcEEEEeccCCCCC
Q 036844 204 --------------------------------------------------LVVQAV-------FGDGAGAAIIGAGPDIS 226 (390)
Q Consensus 204 --------------------------------------------------~~~~~l-------fGDgAaA~vl~~~~~~~ 226 (390)
...+++ .||||+|+||.+.+. .
T Consensus 191 ~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~-A 269 (395)
T 2ib8_A 191 KAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADA-A 269 (395)
T ss_dssp HHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHH-H
T ss_pred HhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHH-H
Confidence 002345 899999999987542 1
Q ss_pred c--cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCH
Q 036844 227 N--HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGD 303 (390)
Q Consensus 227 ~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~ 303 (390)
. ...+..++.+.+... + .+..+ ......+++++|+++|+++ +|| ++-+|..-.
T Consensus 270 ~~~g~~~~a~I~g~~~~~---~-----------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ie~~D~f~ 325 (395)
T 2ib8_A 270 KRLNVTPLARIVAFADAA---V-----------------EPIDF---PIAPVYAASMVLKDVGLKK-EDIAMWEVNEAFS 325 (395)
T ss_dssp HHTTCCCCEEEEEEEEEE---C-----------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGEEEEEECCSBH
T ss_pred HhcCCCccEEEEEEEEec---c-----------------Chhhc---cccHHHHHHHHHHHcCCCH-HHcCEEEEccccH
Confidence 0 011223454433211 0 01111 1223467899999999997 999 999998876
Q ss_pred HHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEE-EEEcccccceeeeeEe
Q 036844 304 GLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVL-FGCGPGLTVETVVLQS 382 (390)
Q Consensus 304 ~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll-~~~G~G~~~ga~ll~~ 382 (390)
...-...+.||++++++..+ .....+||+.+|+-...+.+++.+ ++.| ++.+. +..|.| ...+++|+.
T Consensus 326 ~~~l~~~e~lg~~~~~vn~~-gg~~~~GHp~gAsG~~~~~~~~~~------L~~~---~~gl~~~~~ggG-~g~a~~~~~ 394 (395)
T 2ib8_A 326 LVVLANIKMLEIDPQKVNIN-GGAVSLGHPIGMSGARIVGHLTHA------LKQG---EYGLASICNGGG-GASAMLIQK 394 (395)
T ss_dssp HHHHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHH------SCTT---CEEEEEEEETTT-EEEEEEEEE
T ss_pred HHHHHHHHHcCCCccccCCC-cchhhcCCChhHHHHHHHHHHHHH------HhhC---CceEEEEecccC-HhheEEEEc
Confidence 55555567799988776542 235678999999988888888876 5555 56555 334444 445677664
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-16 Score=154.94 Aligned_cols=268 Identities=14% Similarity=0.092 Sum_probs=172.5
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------CCC---------cH
Q 036844 87 DARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-----------------DMP---------GA 135 (390)
Q Consensus 87 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-----------------~~p---------~~ 135 (390)
..|.....+...+|+.+|+++||+++|+ +++| .|+++++++ + ..| ..
T Consensus 73 ~~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 150 (416)
T 2wge_A 73 GRLDMRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGA 150 (416)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhH
Confidence 3455556667889999999999999998 4555 277777654 3 112 46
Q ss_pred HHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCC-----CCcc-
Q 036844 136 DVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHE-----PSET- 199 (390)
Q Consensus 136 a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~-----~~~~- 199 (390)
+.+|+..||+.. + ++.+..+|++++.||..|..+|++|.++.+|++++|..+.. +.. |+..
T Consensus 151 a~~ia~~lgl~g-p--~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 227 (416)
T 2wge_A 151 AAVIGLQLGARA-G--VMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERAS 227 (416)
T ss_dssp HHHHHHHHTCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSC
T ss_pred HHHHHHHhccCC-C--cccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccc
Confidence 889999999975 3 78999999999999999999999999999999999986531 011 0000
Q ss_pred c-hhhhhhhhhhccCcEEEEeccCCCCC-ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHH
Q 036844 200 H-LDVLVVQAVFGDGAGAAIIGAGPDIS-NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGK 277 (390)
Q Consensus 200 ~-~~~~~~~~lfGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 277 (390)
. .+....+++|||||+|+||++.+.-. .......++.+.+....... + . .+.. ......+
T Consensus 228 ~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~---~-----------~-~p~~---~~~~~~~ 289 (416)
T 2wge_A 228 RPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFH---M-----------V-APAA---DGVRAGR 289 (416)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSC---S-----------S-SCCT---TCHHHHH
T ss_pred cccccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCC---c-----------c-CCCC---ChHHHHH
Confidence 0 00112478999999999998753200 00011234443322111100 0 0 0110 1234567
Q ss_pred HHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH----HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhh
Q 036844 278 CLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE----KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEE 352 (390)
Q Consensus 278 ~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~----~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~ 352 (390)
+++++|+++|+++ +|| +|.+|..+...-+.++ +.++.. ++..+ .....+||+.+|+-.+.|...+.. ..+
T Consensus 290 ai~~al~~agl~~-~dId~ve~HgtgT~~gD~~E~~al~~~~~~--~~~v~-s~k~~~GH~~gAsG~~~~i~~~l~-l~~ 364 (416)
T 2wge_A 290 AMTRSLELAGLSP-ADIDHVNAHGTATPIGDAAEANAIRVAGCD--QAAVY-APKSALGHSIGAVGALESVLTVLT-LRD 364 (416)
T ss_dssp HHHHHHHHHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHTTCT--TSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHcCCCH-HHCCEEEECCCCCcCCCHHHHHHHHHhccC--CCCcc-CCcccccCcHHHHHHHHHHHHHHH-Hhc
Confidence 8999999999997 999 9999988876654432 334432 22211 135678999999887766555432 111
Q ss_pred ccccCC---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 353 RKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 353 g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.+.|- .+..+++..+||-|.+-.+++|+.
T Consensus 365 ~~ipp~~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~sfGfGG~na~~vl~~ 415 (416)
T 2wge_A 365 GVIPPTLNYETPDPEIDLDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGR 415 (416)
T ss_dssp TEECCCTTCCSBCTTTCCEECCSSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred CCcCCCCCCCCCCCCCCcccCCCCCccCCCCEEEEeCcccCceeEEEEEEe
Confidence 222100 011578888999999988888863
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.5e-17 Score=160.52 Aligned_cols=225 Identities=10% Similarity=0.051 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHHcC----CCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWG----QSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag----~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ 171 (390)
+.+|+.+|+++||+++| +++++||.|++++.++ +..|..+.+++..||++.... +++++.+|++++.||..|..
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCasg~~Al~~A~~ 113 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP-FVALNRQCSSGLTAVNDIAN 113 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHHHHHHcCCCCCce-EEEEcCcCHHHHHHHHHHHH
Confidence 88999999999999999 9999999999998887 566788999999999963222 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEeecccc-ccC---------------C----------------------------------------
Q 036844 172 IAENNPGARVLVVCSDIRVL-DFH---------------E---------------------------------------- 195 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d~~s~-~~~---------------~---------------------------------------- 195 (390)
+|++|..+.+|++++|.++. .+. .
T Consensus 114 ~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~ 193 (393)
T 1afw_A 114 KIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYK 193 (393)
T ss_dssp HHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh
Confidence 99999999999999998652 110 0
Q ss_pred ------------C-----------Cccch-----h----h-h-h--h-hhh-------hccCcEEEEeccCCCCCc--cc
Q 036844 196 ------------P-----------SETHL-----D----V-L-V--V-QAV-------FGDGAGAAIIGAGPDISN--HE 229 (390)
Q Consensus 196 ------------~-----------~~~~~-----~----~-~-~--~-~~l-------fGDgAaA~vl~~~~~~~~--~~ 229 (390)
| ++.-+ + . + + . +++ ++|||+|+||.+.+. .. ..
T Consensus 194 ~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~G~vt~~~~~~~~dGAaavvL~s~~~-A~~~g~ 272 (393)
T 1afw_A 194 AKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDRGTTTAGNASQVSDGVAGVLLARRSV-ANQLNL 272 (393)
T ss_dssp HHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC---CCCBTTTBCCBEEEEEEEEEEEHHH-HHHTTC
T ss_pred hHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCCCCeechhcCcccchhheeeEecHHH-HHHcCC
Confidence 0 00000 0 0 0 0 0 123 699999999987542 10 01
Q ss_pred cceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHH
Q 036844 230 RTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ 308 (390)
Q Consensus 230 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~ 308 (390)
.+..++.+.+.... .+..+ ......+++++|+++|+++ +|| ++=.|-.....--.
T Consensus 273 ~~~a~i~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~h~~ft~~~l~ 328 (393)
T 1afw_A 273 PVLGRYIDFQTVGV--------------------PPEIM---GVGPAYAIPKVLEATGLQV-QDIDIFEINEAFAAQALY 328 (393)
T ss_dssp CCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHH
T ss_pred CccEEEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCH-HHCCEEEEeccCHHHHHH
Confidence 12244554332211 01111 1123568899999999997 999 99999887654444
Q ss_pred HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 309 VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 309 ~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..+.||++.+++..+ --...+||..+|+-...+.+++.+
T Consensus 329 ~~~~lg~~~~~vn~~-Gg~~a~GHp~gAsG~~~~~~~~~~ 367 (393)
T 1afw_A 329 CIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE 367 (393)
T ss_dssp HHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH
T ss_pred HHHHhCCCCcCcCCC-CChhhcCCchhhHHHHHHHHHHHH
Confidence 567899988776542 123358999998888888887775
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-17 Score=162.81 Aligned_cols=261 Identities=13% Similarity=0.055 Sum_probs=171.1
Q ss_pred hhHHHHHHHHHHHHHHHcCC-CCCCcC----EEEEEecCC-C-----------------CC---------CcHHHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQ-SVSKIT----HLIFSAFYG-V-----------------DM---------PGADVRLVKL 142 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~-~~~~Id----~li~~s~~~-~-----------------~~---------p~~a~~v~~~ 142 (390)
+...+|+.+|+++||+++|+ ++++|| .|+++++.+ + .. ...+.+|+..
T Consensus 86 d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 165 (431)
T 2ix4_A 86 ANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMK 165 (431)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHH
Confidence 45679999999999999999 988887 577766542 1 11 2478999999
Q ss_pred cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccccc----------CCC------Cccc--hhhh
Q 036844 143 LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF----------HEP------SETH--LDVL 204 (390)
Q Consensus 143 lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~----------~~~------~~~~--~~~~ 204 (390)
||+.. + ++.++.+|+|++.||+.|..+|++|.++.+||+++|.++... ..+ +... .+..
T Consensus 166 lgl~g-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 242 (431)
T 2ix4_A 166 YGFQG-P--NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCD 242 (431)
T ss_dssp HTCCS-C--EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBTT
T ss_pred HCCCC-c--eeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcccccccCCCC
Confidence 99985 4 789999999999999999999999999999999999754210 000 0000 0011
Q ss_pred hhhhhhccCcEEEEeccCCCCC--ccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHh
Q 036844 205 VVQAVFGDGAGAAIIGAGPDIS--NHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNA 282 (390)
Q Consensus 205 ~~~~lfGDgAaA~vl~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 282 (390)
..++++||||+|+||++.+. . .......++.+.+....... +. .+.. ......++++++
T Consensus 243 ~~g~~~gdGAaavvL~~~~~-A~~~g~~i~a~i~g~~~~~dg~~---~~------------~p~~---~~~~~~~ai~~a 303 (431)
T 2ix4_A 243 RDGFVIGEGSGVIVLEEYEH-AKRRGAKIYAELCGYGMSGDAHH---IT------------QPPE---DGKGAVLAMTRA 303 (431)
T ss_dssp CCSBCBBCEEEEEEEEEHHH-HHHTTCCCCEEEEEEEEEECCSC---SS------------CCCT---TCHHHHHHHHHH
T ss_pred CCCceeecceEEEEEccHHH-HHhCCCceEEEEeeeeecCCCCC---CC------------CCCC---CHHHHHHHHHHH
Confidence 24689999999999987532 1 00011234443322211100 00 0100 113456789999
Q ss_pred hccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCc--ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 283 MSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGK--DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 283 L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
|+++|+++ +|| ++.+|..+..+.+ .+.+.++... +++..+ .....+||+.+|+-++.|..++.. ..++.
T Consensus 304 l~~agl~~-~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~-s~k~~~GH~~gAsG~~~li~~~l~-l~~~~ 380 (431)
T 2ix4_A 304 LRQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSILA-IHHGV 380 (431)
T ss_dssp HHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTE
T ss_pred HHHcCCCH-HHcCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HhcCC
Confidence 99999997 999 9999988776443 3444444221 233221 135689999999877776665542 11122
Q ss_pred ccC------------------------CCCCceEEEEEEcccccceeeeeEe
Q 036844 355 ATT------------------------GEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 355 i~~------------------------G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
+.| + ..+++.-+||.|.+-.+++|+.
T Consensus 381 ipp~~~~~~~~p~~~~~~v~~~~~~~~~--~~~a~~~sfGfGG~na~~il~~ 430 (431)
T 2ix4_A 381 APMTLNVKNPDPIFDKRFMPLTTSKKML--VRTAMSNSFGFGGTNASLLFAS 430 (431)
T ss_dssp ECCCTTCSSBCTTCCSSSCCCSSCEECC--CSEEEEEEEETTTEEEEEEEEC
T ss_pred cCCCCCCCCCCCCCCcccCCccccccCC--CCEEEEecccCCCeeEEEEEee
Confidence 210 2 1578888999999988888863
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=156.86 Aligned_cols=320 Identities=13% Similarity=0.085 Sum_probs=198.1
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
++.|.|+|...|.- .+.+++.+.+.. .. ....++. .+ ...++..|... .-. + ++.+ -+..+.
T Consensus 3 ~v~ItG~g~~~p~g-~~~~~~w~~l~~-g~-~~i~~~~---~~--~~~~~~~~~~~-~v~-f--d~~~------~~~~~~ 64 (406)
T 2vba_A 3 RAVITGLGIVSSIG-NNQQEVLASLRE-GR-SGITFSQ---EL--KDSGMRSHVWG-NVK-L--DTTG------LIDRKV 64 (406)
T ss_dssp CEEEEEEEEEBTTB-SSHHHHHHHHHH-TC-CCEEECH---HH--HHTTCSCCEEE-CCC-C--CCTT------SSCHHH
T ss_pred CEEEEeeEEECCCC-CCHHHHHHHHHc-CC-CeEEeCC---cc--cccCCccceEE-Eec-C--Chhh------cCCHHH
Confidence 48999999999987 566676665421 11 1101111 11 11122222111 000 0 0000 022333
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCE-----EEEEecCC-C---------------------------CCCcHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITH-----LIFSAFYG-V---------------------------DMPGADV 137 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~-----li~~s~~~-~---------------------------~~p~~a~ 137 (390)
....+...+|+.+|+++||+++|+++++||. |+++++.+ + .....+.
T Consensus 65 ~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 144 (406)
T 2vba_A 65 VRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSA 144 (406)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHH
Confidence 3444567899999999999999999988885 88887754 2 0135778
Q ss_pred HHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c-----------CCC
Q 036844 138 RLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F-----------HEP 196 (390)
Q Consensus 138 ~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~-----------~~~ 196 (390)
+|+..||+.. + ++.++.+|++++.||..|..+|++|.++.+|++++|..+.. + ..|
T Consensus 145 ~is~~lgl~G-p--~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~~~~~~ls~~~~~~p~~~~~p 221 (406)
T 2vba_A 145 CLATPFKIHG-V--NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRT 221 (406)
T ss_dssp HHHTTTTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCT
T ss_pred HHHHhccCCC-c--eeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHHHhhccccccccCCCCccccCc
Confidence 9999999975 4 78999999999999999999999999999999999986432 0 011
Q ss_pred CccchhhhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhH
Q 036844 197 SETHLDVLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYI 275 (390)
Q Consensus 197 ~~~~~~~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 275 (390)
.+. ...++++||||+++||++.+.- ........++.+.+......+ +. .+. ....
T Consensus 222 fd~----~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~---~t------------~p~-----~~~~ 277 (406)
T 2vba_A 222 YDA----HRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGAD---MV------------APS-----GEGA 277 (406)
T ss_dssp TBT----TCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSC---TT------------SCC-----SHHH
T ss_pred CcC----CCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCC---CC------------CCC-----HHHH
Confidence 111 1247899999999999875320 000011234444332211100 00 011 2345
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhh
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKS 349 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~ 349 (390)
.++++++|+++| +|| ++..|..+..+-+ .+.+.++-..-.+.. +-..+||+.+|+-.+.+..++..
T Consensus 278 ~~ai~~al~~ag----~dId~ve~HgtgT~~gD~~E~~al~~~fg~~~~~v~s---~K~~~GH~~gAaG~~~~i~~~l~- 349 (406)
T 2vba_A 278 VRCMKMAMHGVD----TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA---TKAMTGHSLGAAGVQEAIYSLLM- 349 (406)
T ss_dssp HHHHHHHHTTCC----SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEEC---THHHHCBCGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHhhCC----CCccEEEeeCccCcccCHHHHHHHHHHhCcCCCceeC---chhhhcccHHHHHHHHHHHHHHH-
Confidence 678999999998 578 9999998877643 455666643222222 24568999999887776655542
Q ss_pred hhhccccC-----------C----------CCCceEEEEEEcccccceeeeeEee
Q 036844 350 FEERKATT-----------G----------EGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 350 ~~~g~i~~-----------G----------~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
..++.+.| + .+..+++.-+||-|.+-.+++|+..
T Consensus 350 l~~~~ipp~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~sfGfgG~na~~vl~~~ 404 (406)
T 2vba_A 350 LEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRKL 404 (406)
T ss_dssp HHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred HhcCccCCCCCCCCCCCCccccccCCcccCCCCCEEEEcCCCCCCeEEEEEEEeC
Confidence 11132211 0 0115678889999999899998754
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=159.72 Aligned_cols=252 Identities=12% Similarity=0.021 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCcCEEEEEecCC-CC-CCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEW-GQSVSKITHLIFSAFYG-VD-MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~a-g~~~~~Id~li~~s~~~-~~-~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
..+|+.+|+++||+++ |+++++||.|+++++++ +. .+..+.+++..||++.... ++.++.+|++++.||..|..+|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl~~~~p-~~~v~~aCaS~~~Al~~A~~~I 108 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQAI 108 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCCCCCcc-EEEEcccchhHHHHHHHHHHHH
Confidence 7899999999999999 99999999999998876 33 4788999999999964332 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc-c-----cCCCC-------------c----------cchhh---------------------
Q 036844 174 ENNPGARVLVVCSDIRVL-D-----FHEPS-------------E----------THLDV--------------------- 203 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~-~-----~~~~~-------------~----------~~~~~--------------------- 203 (390)
++|..+.+|++++|.++. . |.++. . .++++
T Consensus 109 ~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~ 188 (390)
T 1wdk_C 109 MTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKF 188 (390)
T ss_dssp HTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999998753 1 10100 0 00000
Q ss_pred ------------------------------------------hhhhhh-------hccCcEEEEeccCCCCCc--cccce
Q 036844 204 ------------------------------------------LVVQAV-------FGDGAGAAIIGAGPDISN--HERTL 232 (390)
Q Consensus 204 ------------------------------------------~~~~~l-------fGDgAaA~vl~~~~~~~~--~~~~~ 232 (390)
+..+++ +||||+|+||.+.+. .. ...+.
T Consensus 189 ~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~-A~~~g~~~~ 267 (390)
T 1wdk_C 189 KDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQR-AKDLGLEPL 267 (390)
T ss_dssp TTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGGGBCCCEEEEEEEEEEEHHH-HHHTTCCCS
T ss_pred ccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEechhcCcccchhheeEEecHHH-HHHcCCCcc
Confidence 013446 999999999987542 10 01122
Q ss_pred eEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHH
Q 036844 233 FQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEK 311 (390)
Q Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~ 311 (390)
.++.+.+.... .+..+ ......+++++|+++|+++ +|| +|-+|.........+.+
T Consensus 268 a~I~g~~~~~~--------------------~p~~~---~~~~~~a~~~al~~Agl~~-~dId~ve~~d~f~~~~~~~~~ 323 (390)
T 1wdk_C 268 AVIRSMAVAGV--------------------DPAIM---GYGPVPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLK 323 (390)
T ss_dssp EEEEEEEEEEC--------------------CGGGG---GGTHHHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHH
T ss_pred EEEEEEEEecc--------------------Chhhc---chhHHHHHHHHHHHcCCCh-hhCcEEEeccCCHHHHHHHHH
Confidence 45554332210 01111 1223468899999999997 999 99999888766667789
Q ss_pred HcCCC---cccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 312 NLGLG---KDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 312 ~lgi~---~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.||++ .+++..+ .....+||+.+|+-...+.+++.+-. + +.+ .+.|....+.|....+++|+.
T Consensus 324 ~lg~~~~~~~~vn~~-gg~~~~GHp~gasG~~~~~~~~~~L~--~--~~~---~~gl~~~~~ggG~~~a~~~~~ 389 (390)
T 1wdk_C 324 DLKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNVMK--Q--NGG---TFGLSTMCIGLGQGIATVFER 389 (390)
T ss_dssp HTTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--H--TTC---SEEEEEEEETTTEEEEEEEEC
T ss_pred HcCCCCCCCCcCCCC-cCcccccCCcchhHHHHHHHHHHHHh--h--cCC---CEEEEEecccchheEEEEEEe
Confidence 99997 4455432 13456899999986666665555311 1 123 555555444444566777764
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.72 E-value=8.6e-17 Score=159.68 Aligned_cols=254 Identities=11% Similarity=0.038 Sum_probs=168.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-C-CCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-V-DMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~-~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
++.+|+.+|+++||+++|+++++||.|+++++++ + ..+..+.+++..||++.... +++++.+|++++.||..|..+|
T Consensus 54 ~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~lGl~~~~p-~~~v~~aCaSg~~Al~~A~~~I 132 (442)
T 2wu9_A 54 YPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVA-VRTVNRQCSSGLQAVADVAAAI 132 (442)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHHcCCCCCce-EEEeCCcCHHHHHHHHHHHHHH
Confidence 3889999999999999999999999999988776 3 24678899999999963222 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc-ccCC-----------------------------------------------------CCc-
Q 036844 174 ENNPGARVLVVCSDIRVL-DFHE-----------------------------------------------------PSE- 198 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~-~~~~-----------------------------------------------------~~~- 198 (390)
++|..+.||++++|.++. .+.. |..
T Consensus 133 ~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag 212 (442)
T 2wu9_A 133 KAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAG 212 (442)
T ss_dssp HTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcc
Confidence 999999999999998763 1100 000
Q ss_pred -cch----------------------------------hh-----h-h--hhhh-------hccCcEEEEeccCCCCCc-
Q 036844 199 -THL----------------------------------DV-----L-V--VQAV-------FGDGAGAAIIGAGPDISN- 227 (390)
Q Consensus 199 -~~~----------------------------------~~-----~-~--~~~l-------fGDgAaA~vl~~~~~~~~- 227 (390)
.+. +. + + .+++ ++|||+|+||.+.+. ..
T Consensus 213 ~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~~G~vt~~n~s~~~DGAaavvL~s~e~-A~~ 291 (442)
T 2wu9_A 213 KFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSV-AMQ 291 (442)
T ss_dssp TTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCTTCCCCGGGBCCCEEEEEEEEEEEHHH-HHH
T ss_pred cccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCCCCCeechhcCCCCCceEEEEEeeHHH-HHH
Confidence 000 00 0 0 0122 589999999876542 10
Q ss_pred -cccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHH
Q 036844 228 -HERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGL 305 (390)
Q Consensus 228 -~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~ 305 (390)
...+..++.+.+.... .+..+ ......+++++|+++|+++ +|| +|=.|-.....
T Consensus 292 ~g~~~~a~I~g~~~~~~--------------------~p~~~---~~~~~~A~~~Al~~AGl~~-~DId~iE~h~aft~~ 347 (442)
T 2wu9_A 292 KGLPVLGVFRTFAAVGV--------------------DPAIM---GIGPAVAIPAAVKAAGLEL-DDIDLFEINEAFASQ 347 (442)
T ss_dssp HTCCCCEEEEEEEEEEC--------------------CGGGG---GGHHHHHHHHHHHHTTCCG-GGCCEEEECCSBHHH
T ss_pred cCCCceEEEEEEEEecC--------------------Cchhc---chHHHHHHHHHHHHcCCCH-HHCCEEEEeCCChHH
Confidence 0112234544332210 11111 1123468899999999997 999 99999887665
Q ss_pred HHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEE-EEEcccccceeeeeEe
Q 036844 306 IDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVL-FGCGPGLTVETVVLQS 382 (390)
Q Consensus 306 ~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll-~~~G~G~~~ga~ll~~ 382 (390)
--...+.||++.+++..+ --...+||..+|+-...+.+++.+-. ++...+ ++.|. ..+|. ....+++|+.
T Consensus 348 ~l~~~~~lG~~~~~vN~~-GG~~a~GHp~GAsG~~~~~~~v~~Lr--~~~~~~---~~glas~~~GG-G~~~a~v~~~ 418 (442)
T 2wu9_A 348 FVYCRNKLGLDPEKINVN-GGAMAIGHPLGATGARCVATLLHEMK--RRGKDC---RFGVVSMCIGT-GMGAAAVFER 418 (442)
T ss_dssp HHHHHHHHTCCGGGBSTT-CCHHHHCCCHHHHHHHHHHHHHHHHH--HHCTTC---CEEEEEEEETT-TEEEEEEEEE
T ss_pred HHHHHHHhCCCCCCcCCC-ccHhhcCCchhHHHHHHHHHHHHHHh--ccCCCC---CEEEEEeeccc-chheEEEEEe
Confidence 445567899988777542 12335899988777666666655411 111112 45553 55774 4556677764
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.7e-16 Score=157.42 Aligned_cols=256 Identities=14% Similarity=0.088 Sum_probs=170.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-CC--------------------------CCcHHHHHHHHc
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-VD--------------------------MPGADVRLVKLL 143 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~~--------------------------~p~~a~~v~~~l 143 (390)
+...+|+.+|+++||+++|+++++|| .|+++++.+ +. .+..+.+|+..+
T Consensus 90 d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 169 (428)
T 3mqd_A 90 GRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFF 169 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHc
Confidence 35789999999999999999999998 688887654 21 345789999999
Q ss_pred CCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccccc---------------------CCCCccchh
Q 036844 144 GLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF---------------------HEPSETHLD 202 (390)
Q Consensus 144 gl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~---------------------~~~~~~~~~ 202 (390)
|+.. + ++.++.+|+|++.||..|.++|++|.++.+|++++|.++... ..|.+
T Consensus 170 gl~g-p--~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd---- 242 (428)
T 3mqd_A 170 KIKG-I--NYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYD---- 242 (428)
T ss_dssp TCCS-C--EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCTTTTSGGGSCCTTB----
T ss_pred CCCC-c--eeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccchHHHHHHHHhhhhcccccCCcccccCccc----
Confidence 9975 3 789999999999999999999999999999999999865210 00111
Q ss_pred hhhhhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHH
Q 036844 203 VLVVQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSN 281 (390)
Q Consensus 203 ~~~~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 281 (390)
....++++||||+|+||++.+.- ........++.+.+... ++..+ ..+ ......+++++
T Consensus 243 ~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~--------------dg~~~-~~P-----~~~~~~~ai~~ 302 (428)
T 3mqd_A 243 KNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATS--------------DGYDM-VAP-----SGEGAIRCMKM 302 (428)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE--------------CCSCS-SSC-----CSHHHHHHHHH
T ss_pred CCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcC--------------CCCCC-CCC-----CHHHHHHHHHH
Confidence 12247899999999999875320 00011234454433221 11000 011 11234578888
Q ss_pred hhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccc
Q 036844 282 AMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKA 355 (390)
Q Consensus 282 ~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i 355 (390)
+|+ |++ +|| +|-.|..+..+-+. +.+.++....++..+ ..-..+||+.+|+-.+.|..++.. .+++.+
T Consensus 303 Al~--gl~--~dId~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~-s~K~~~GH~~gAsG~~~~i~~~~~-l~~~~i 376 (428)
T 3mqd_A 303 ALS--TVT--SKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIA-ATKSLTGHSLGATGVQEAIYSLLM-MQNNFI 376 (428)
T ss_dssp HHT--TCC--SCCCEEECCCCSCHHHHHHHHHHHHHHHCSGGGSCCBC-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEE
T ss_pred HHh--CCc--cccCEEEEeCCCCCCcCHHHHHHHHHHhcccCCCceee-cchhhhcccHHHHHHHHHHHHHHH-HHhCCc
Confidence 998 887 788 99999888775554 455666433222221 124457999999876665544332 000222
Q ss_pred cC----------------------CCCCceEEEEEEcccccceeeeeEee
Q 036844 356 TT----------------------GEGLDCGVLFGCGPGLTVETVVLQSF 383 (390)
Q Consensus 356 ~~----------------------G~~~d~vll~~~G~G~~~ga~ll~~~ 383 (390)
.+ ..+..+++..+||-|.+-++++|+..
T Consensus 377 pp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~sfGfGG~Na~~vl~~~ 426 (428)
T 3mqd_A 377 CESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRY 426 (428)
T ss_dssp CCCTTCSSBCGGGTTSCBCSSCEESCCCCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCCCCCCCCcccccCCccCCccccCCCCEEEEecCcCCcceEEEEEeec
Confidence 11 01125788899999999999998753
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-15 Score=163.79 Aligned_cols=275 Identities=16% Similarity=0.194 Sum_probs=182.3
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-CCC-------------------CcHHHHHHH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYG-VDM-------------------PGADVRLVK 141 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~-~~~-------------------p~~a~~v~~ 141 (390)
+..|.....+....|+.+|+.+||+++|+++++||. |+++++.. +.. ...+.+|+.
T Consensus 105 i~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~ 184 (917)
T 2hg4_A 105 ISPREALAMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAY 184 (917)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHH
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHH
Confidence 345555666778999999999999999999999984 77777765 321 136789999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----cC-----CCCcc--chhhhhhhhh
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD-----FH-----EPSET--HLDVLVVQAV 209 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-----~~-----~~~~~--~~~~~~~~~l 209 (390)
.||+.. + ++.+..+|++++.||+.|.+.|++|.++.+|++++|.++.. |. .++.. ..+....+++
T Consensus 185 ~lgl~G-p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~~g~~~pFd~~adG~~ 261 (917)
T 2hg4_A 185 CLGLEG-P--AMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAADGRCKPFSKAADGFG 261 (917)
T ss_dssp HHTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCTTSCCCTTBTTCCCBC
T ss_pred hcCCCC-C--eEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCCccccCcccccccCCC
Confidence 999986 4 78999999999999999999999999999999999987531 10 11100 0011234789
Q ss_pred hccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCC
Q 036844 210 FGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGI 288 (390)
Q Consensus 210 fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl 288 (390)
+||||+|+||++.+.- .........+.+.+......+. +...+. .....++++++|+++|+
T Consensus 262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~----------------~~~~P~--~~~q~~ai~~Al~~Agl 323 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASN----------------GLTAPS--GPAQQRVIRRALENAGV 323 (917)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCS----------------SSSCCC--HHHHHHHHHHHHHHHTC
T ss_pred CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCcc----------------CCCCCC--HHHHHHHHHHHHHHcCC
Confidence 9999999999874320 0000112334433222111110 001111 24456789999999999
Q ss_pred CCCCce-eEEEcCCCHHH-----HHHHHHHcCCCc---ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc---
Q 036844 289 SDWNSL-FYVLHPGGDGL-----IDQVEKNLGLGK---DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT--- 356 (390)
Q Consensus 289 ~~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~--- 356 (390)
++ +|| ++..|..+..+ .+.+.+.+|... ..+..+ .+...+||+.+|+-+..|..++.. ..++.+.
T Consensus 324 ~p-~dId~veaHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~vl~-L~~~~ipp~~ 400 (917)
T 2hg4_A 324 RA-GDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIG-SVKSNIGHTQAAAGVAGVMKAVLA-LRHGEMPRTL 400 (917)
T ss_dssp CG-GGCCEEECCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEE-CTHHHHCBCGGGTTHHHHHHHHHH-HHHTEECCCT
T ss_pred CH-HHCCEEeeccCCCccCcHHHHHHHHHHhccccCCCCceecc-CcccceecchhhhHHHHHHHHHHH-HhcCCcCCCC
Confidence 97 999 99999988754 344556666532 122211 146679999988877776655532 1112211
Q ss_pred --------------------------CCCCCceEEEEEEcccccceeeeeEeec
Q 036844 357 --------------------------TGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 357 --------------------------~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
.+.+..++++-+||.|.+-+.++|+-.+
T Consensus 401 ~~~~~~p~i~~~~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 454 (917)
T 2hg4_A 401 HFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP 454 (917)
T ss_dssp TCCSBCTTSCC---CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCCCCccCCccccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence 0101157888999999999999998754
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.8e-15 Score=161.00 Aligned_cols=273 Identities=15% Similarity=0.165 Sum_probs=183.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCC-CCC-------------C-----cHHHHHHHHcC
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYG-VDM-------------P-----GADVRLVKLLG 144 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~-~~~-------------p-----~~a~~v~~~lg 144 (390)
.|.....+...+|+.+|+.+||+++|+++++||. |+++++++ +.. | ..+.+|+..||
T Consensus 86 ~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lg 165 (915)
T 2qo3_A 86 PREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMG 165 (915)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhC
Confidence 4445555678899999999999999999999994 88877765 421 1 36789999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCcc--chhhhhhhhhhcc
Q 036844 145 LKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FHEPSET--HLDVLVVQAVFGD 212 (390)
Q Consensus 145 l~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~~--~~~~~~~~~lfGD 212 (390)
+.. + ++.++.+|+|++.||+.|.++|++|.++.+|++++|.++.. ...++.. ..+....++++||
T Consensus 166 l~G-p--s~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~gE 242 (915)
T 2qo3_A 166 LEG-P--SISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFSE 242 (915)
T ss_dssp BCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBBC
T ss_pred CCC-C--EEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeecC
Confidence 976 4 78999999999999999999999999999999999986521 1111100 0011224789999
Q ss_pred CcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCC
Q 036844 213 GAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDW 291 (390)
Q Consensus 213 gAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 291 (390)
||+|+||++.+.- .........+.+.+....+.+. +...+. .....++++++|+++|+++
T Consensus 243 GagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~----------------~~~~p~--~~~~~~~i~~Al~~Agl~p- 303 (915)
T 2qo3_A 243 GVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASN----------------GLSAPS--GPAQRRVIRQALESCGLEP- 303 (915)
T ss_dssp EEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCS----------------STTCCC--HHHHHHHHHHHHHHTTCCG-
T ss_pred ceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCcc----------------CCCCCC--HHHHHHHHHHHHHHcCCCH-
Confidence 9999999874320 0000112334433222111110 111111 2345678999999999997
Q ss_pred Cce-eEEEcCCCHHH-----HHHHHHHcCCCc---ccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcccc------
Q 036844 292 NSL-FYVLHPGGDGL-----IDQVEKNLGLGK---DKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKAT------ 356 (390)
Q Consensus 292 ~di-~~i~h~~~~~~-----~~~~~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~------ 356 (390)
+|| +|.+|..+..+ ...+.+.++... ..+..+ .+...+||+.+|+-+..|..++.. ..++.+.
T Consensus 304 ~dId~ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vg-s~K~~iGH~~~AaG~~~lik~~l~-L~~~~ipp~~~~~ 381 (915)
T 2qo3_A 304 GDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLG-SVKSNIGHTQAAAGVTGLLKVVLA-LRNGELPATLHVE 381 (915)
T ss_dssp GGCCEEECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCCSSCS
T ss_pred HHCcEEEecCCCCccCCHHHHHHHHHHhccccCCCCccccc-CcccceeCCccccchHHHHHHHHH-HhcCCCCCCCCCC
Confidence 999 99999875433 345667787643 122221 146789999999888777665542 1113221
Q ss_pred -----------------------CCCCCceEEEEEEcccccceeeeeEeec
Q 036844 357 -----------------------TGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 357 -----------------------~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
.+.+..++++-+||.|.+-..++|+-.+
T Consensus 382 ~~~p~~~~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~ 432 (915)
T 2qo3_A 382 EPTPHVDWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP 432 (915)
T ss_dssp SBCTTSCCSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCcccccccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence 1111257889999999999999998654
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.4e-13 Score=146.68 Aligned_cols=273 Identities=14% Similarity=0.132 Sum_probs=182.2
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------CCCcHHHHHHH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-------------------DMPGADVRLVK 141 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-------------------~~p~~a~~v~~ 141 (390)
+..|.....+....|+.+|+.+||+++|+++++|| .|++++++. + ..+..+.+|+.
T Consensus 69 i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~ 148 (965)
T 3hhd_A 69 VHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSF 148 (965)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHH
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHH
Confidence 45566666677889999999999999999999999 788887654 3 23347899999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCCCCcc--chhhhhhhhh
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFHEPSET--HLDVLVVQAV 209 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~~~~~--~~~~~~~~~l 209 (390)
.||+.. + ++.++.+|+|++.||++|.+.|++|.++.+|+.++|.++. .+..|+.. ..+....+++
T Consensus 149 ~lgl~G-P--s~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~~ 225 (965)
T 3hhd_A 149 FFDFRG-P--SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYC 225 (965)
T ss_dssp HHTCCS-C--EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBCTTCCCCTTBTTCCSBC
T ss_pred HhCCCC-C--eeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcCCCCccccchhccCCcc
Confidence 999986 3 7899999999999999999999999999999999998641 01111100 0011234789
Q ss_pred hccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCC
Q 036844 210 FGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGIS 289 (390)
Q Consensus 210 fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~ 289 (390)
+||||+++||.+... .. .....+.+.+......... +...+. .....++++++|+++|++
T Consensus 226 ~gEGagavvL~~l~~-A~--~i~a~I~g~~~n~dg~~~~---------------~~t~P~--~~~q~~~i~~Al~~Agl~ 285 (965)
T 3hhd_A 226 RSEGVVAVLLTKKSL-AR--RVYATILNAGTNTDGFKEQ---------------GVTFPS--GDIQEQLIRSLYQSAGVA 285 (965)
T ss_dssp BBCEEEEEEEEEGGG-CS--SCSEEEEEEEEEECCCCTT---------------CTTSCC--HHHHHHHHHHHHHHTTCC
T ss_pred ccceEEEEEEecHHH-cC--cccEEEEeeeccCCCCCCC---------------CCcCCC--HHHHHHHHHHHHHHhCCC
Confidence 999999999988654 21 1123444333221111000 011111 233457899999999999
Q ss_pred CCCce-eEEEcCCCHHH-----HHHHHHHcCCCcc-cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCC--
Q 036844 290 DWNSL-FYVLHPGGDGL-----IDQVEKNLGLGKD-KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEG-- 360 (390)
Q Consensus 290 ~~~di-~~i~h~~~~~~-----~~~~~~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~-- 360 (390)
+ +|| ++-.|-.+... ...+.+.++-..+ .+... .+-..+||+.+|+-...|...+.. .++|.+.|-.+
T Consensus 286 p-~dIdyvEaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vg-s~Ks~iGH~~~AaG~~~lik~~l~-l~~~~ipp~~~~~ 362 (965)
T 3hhd_A 286 P-ESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIG-STKSNMGHPEPASGLAALAKVLLS-LEHGLWAPNLHFH 362 (965)
T ss_dssp G-GGEEEEECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEE-CTHHHHCBCGGGHHHHHHHHHHHH-HHHTEECCCSSCC
T ss_pred H-HHhccccccCCCCCCCCHHHHHHHHHHhcccCCCceeee-ccccccccchhhhhHHHHHHHHHH-HhcCCcCCccCCC
Confidence 7 999 99999776543 3445566653222 22221 135567999999877666554432 11122211000
Q ss_pred ------------------------CceEEEEEEcccccceeeeeEeec
Q 036844 361 ------------------------LDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 361 ------------------------~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
..++++-+||.|.+-+.++|+-.+
T Consensus 363 ~~np~i~~~~~~~~~v~~~~~~~~~~~a~v~sfG~gG~Nah~il~~~~ 410 (965)
T 3hhd_A 363 SPNPEIPALLDGRLQVVDQPLPVRGGNVGINSFGFGGSNVHIILRPNT 410 (965)
T ss_dssp SBCTTCHHHHHTSEEECCSCEECCSCEEEEEEECTTSEEEEEEEEECC
T ss_pred CCCccCcccccCceeecCCCccCCCCeEEEecccCCCceEEEEeccCC
Confidence 035788999999999999998654
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.8e-12 Score=128.70 Aligned_cols=259 Identities=14% Similarity=0.058 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-------------CCCCcHHHHHHHHcCCCCccccceeeccccchH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-------------VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMG 162 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-------------~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~ 162 (390)
++.+|+.+|++.||+++|+++++||.+|.+.... ...+.....++..||++..+ +..+..+|+++
T Consensus 41 s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~va~~lGl~~~~--~~~~~~~caSg 118 (520)
T 4egv_A 41 SSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRSVARNIGADPAH--AVLEVIGGQSP 118 (520)
T ss_dssp CHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHHHHHHHTCCCSE--EEECCSSTTHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHHHHHHcCCCCce--EEEecCCCHHH
Confidence 4889999999999999999999988766443211 12346778999999999765 77789999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccc-c-CC----C----------------------------------------
Q 036844 163 GTVIRLAKDIAENNPGARVLVVCSDIRVLD-F-HE----P---------------------------------------- 196 (390)
Q Consensus 163 ~~al~~A~~ll~~g~~~~vLvv~~d~~s~~-~-~~----~---------------------------------------- 196 (390)
+.+|..|++.|++|.++.||+++.|.+|.. + .. +
T Consensus 119 ~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~ 198 (520)
T 4egv_A 119 QHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYTIRHGLIGAPVQYGLL 198 (520)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTTGGGTCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHHHHhCCCcHHHHHHHH
Confidence 999999999999999999999999998621 0 00 0
Q ss_pred ----------------------------------C-----ccchhh-----------------hhhhhhhccCcEEEEec
Q 036844 197 ----------------------------------S-----ETHLDV-----------------LVVQAVFGDGAGAAIIG 220 (390)
Q Consensus 197 ----------------------------------~-----~~~~~~-----------------~~~~~lfGDgAaA~vl~ 220 (390)
+ +.+.+. ...++..+|||+|+||.
T Consensus 199 ~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~nas~isDGAAAvVL~ 278 (520)
T 4egv_A 199 ENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLMVARDQVNQGAALLMM 278 (520)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGGCC--CCCEEEEEEEE
T ss_pred HHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccccccCCCCcceEEEEEe
Confidence 0 000000 01134568999999998
Q ss_pred cCCCCCc--cccceeEEEeeeee-ecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eE
Q 036844 221 AGPDISN--HERTLFQVLSCTQT-TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FY 296 (390)
Q Consensus 221 ~~~~~~~--~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 296 (390)
+... .. ...+...+...+.. ..|.. + + ..+... .......+++++|+++|+++ +|| +|
T Consensus 279 S~e~-A~~lGl~p~a~I~~~a~a~~~~~~---~-~----------~~~~~~--~~~~~~~a~~~al~~agl~~-~did~~ 340 (520)
T 4egv_A 279 SVES-ARKLGVPEEKWVYLRGHADMKEPK---L-L----------ERADIG--ASPASVTAVNEALRVAGIGL-DDVAAF 340 (520)
T ss_dssp EHHH-HHHHTCCGGGCEEEEEEEEEECCC---G-G----------GCSCTT--CCHHHHHHHHHHHHHHTCCG-GGEEEE
T ss_pred eHHH-HHHcCCCCceEEEEEEEeccCCcc---c-c----------cccccc--cChHHHHHHHHHHHHhCCCH-HHCCEE
Confidence 7543 10 01122223222111 01110 0 0 001100 01123467889999999997 999 99
Q ss_pred EEcCCCHHHHHHHHHHcCCCcc---cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccc
Q 036844 297 VLHPGGDGLIDQVEKNLGLGKD---KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGL 373 (390)
Q Consensus 297 i~h~~~~~~~~~~~~~lgi~~e---~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 373 (390)
=+|-.-........+.||++.+ ++..+ --+..+||..+++-...+.++..+-- -..| .+.|..+.| |+
T Consensus 341 E~~dAF~~~~l~~~~~lG~~~~~~~~~n~~-Gg~~~~Ghp~~a~g~~~~~~~v~~lr----~~~~---~~~L~~~~g-g~ 411 (520)
T 4egv_A 341 DLYSCFPFPVFNICDGTGLATDDPRGLTLT-GGLPFFGGLGNNYSMHGIAEAVNEMR----DKPG---QFALVGANG-GI 411 (520)
T ss_dssp EECCSSSHHHHHHHHHHCCCTTCTTCSCSS-CCHHHHCSCSSSHHHHHHHHHHHHHH----HSTT---CEEEEEEEE-TT
T ss_pred EEeCCcHHHHHHHHHHhCCCCCCCCCcCCC-cccccCCChHHHHHHHHHHHHHHHHh----cCCC---CceEEeCCC-Ce
Confidence 9998766666778899999543 44331 12456899999888888877776511 1234 666665554 56
Q ss_pred cceeeeeEee
Q 036844 374 TVETVVLQSF 383 (390)
Q Consensus 374 ~~ga~ll~~~ 383 (390)
-|....+.+.
T Consensus 412 ~~~~~~~~l~ 421 (520)
T 4egv_A 412 ASKYSVGIYS 421 (520)
T ss_dssp TTEEEEEEEE
T ss_pred eeeeeEEEEc
Confidence 6655555553
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1e-11 Score=145.27 Aligned_cols=281 Identities=13% Similarity=0.104 Sum_probs=174.0
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC--------EEEEEecCC-C-----------------------CC-
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT--------HLIFSAFYG-V-----------------------DM- 132 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id--------~li~~s~~~-~-----------------------~~- 132 (390)
+..|.....+....|+.+|+.+||+++|+++++|+ .|+++++.+ . ..
T Consensus 2636 Is~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2715 (3089)
T 3zen_D 2636 ISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLP 2715 (3089)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTST
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccc
Confidence 45666666678899999999999999999999885 577776532 0 11
Q ss_pred CcHHHHHHH-HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c--------------
Q 036844 133 PGADVRLVK-LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----F-------------- 193 (390)
Q Consensus 133 p~~a~~v~~-~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----~-------------- 193 (390)
...+.++.. .+|+.. + ++.++.+|+|++.||++|..+|++|.++.+|+.++|.++.. |
T Consensus 2716 ~~~aa~is~~~lGl~G-P--s~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~~~~~~f~~~~als~~~~~~~ 2792 (3089)
T 3zen_D 2716 NVVAAHVMQSYVGGYG-A--MVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTLEAIIGFGDMAATADTEMMRA 2792 (3089)
T ss_dssp THHHHHHHHHTTCCCS-C--EECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHH
T ss_pred cHHHHHHHHHHcCCCC-C--ceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCHHHHHHHHHhhhhhcchhhhh
Confidence 235566665 469975 3 78999999999999999999999999999999999986520 0
Q ss_pred --CCCCcc--chhhhhhhhhhccCcEEEEeccCCCCCc-cccceeEEEe-eeeeecCCCCCceeeEeecceeEEEeCCcc
Q 036844 194 --HEPSET--HLDVLVVQAVFGDGAGAAIIGAGPDISN-HERTLFQVLS-CTQTTIPDTENYITGQLKEMGIYGHLSLDV 267 (390)
Q Consensus 194 --~~~~~~--~~~~~~~~~lfGDgAaA~vl~~~~~~~~-~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v 267 (390)
.+|... ..+....++++||||+++||.+... .. .....+-++. ......+.+... ... +...
T Consensus 2793 ~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~-A~~~G~~I~avI~g~~~n~Dg~~~~~-----~aP------~~g~ 2860 (3089)
T 3zen_D 2793 KGISDSKFSRANDRRRLGFLEAQGGGTILLARGDL-ALKMGLPVLAVVGYAQSFADGVHTSI-----PAP------GLGA 2860 (3089)
T ss_dssp TTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHH-HHHHTCCCCEEEEEEEEECCCCCCCS-----SCC------CCGG
T ss_pred ccCCcccccCccccCCCCEEEeccceEEEEeeHHH-HHhCCCceEEEEEEEEEecCCcccCc-----cCC------chhH
Confidence 001100 0001124688999999999987532 10 0001122222 111111111000 000 1111
Q ss_pred hHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH--------HHHHHcCCCc-ccchhHHHHHhhcCCCccch
Q 036844 268 PVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID--------QVEKNLGLGK-DKLWASRYVLREYGNVGAAS 337 (390)
Q Consensus 268 ~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~--------~~~~~lgi~~-e~~~~~~~~~~~~Gn~~sas 337 (390)
+..+...-.++++++|+++|+++ +|| ++-+|-.+..+-+ .+.+.+|... .++..+ ..-..+||+.+|+
T Consensus 2861 ~~a~~~~q~~ai~~AL~~AGl~p-~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~-s~Ks~iGH~~gAA 2938 (3089)
T 3zen_D 2861 LGAARGGRESTLARSLAQLGVGA-DDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIV-SQKTLTGHAKGGA 2938 (3089)
T ss_dssp GGGSTTGGGSHHHHHHHTTTCCG-GGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEE-CSHHHHCBCSTTH
T ss_pred HhHhhhhHHHHHHHHHHHcCCCH-HHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceec-ccccccCCchhhh
Confidence 11111122367899999999997 999 9999988765433 4556778654 333221 1356789999988
Q ss_pred HHHHHHHHHHhhhhhccccC----------------------------CCCCceEEEEEEcccccceeeeeEeec
Q 036844 338 VFFILDEVRKKSFEERKATT----------------------------GEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 338 ~~l~L~~~~~~~~~~g~i~~----------------------------G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
-...|..++.. ..+|.+.+ ..+..++++.+||-|.+-+.++|+-.+
T Consensus 2939 G~~~lik~ll~-L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2939 AVFQMMGLCQI-LRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp HHHHHHHHHHH-HHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred hHHHHHHHHHH-HhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 66655544332 00122211 000146888999999998888887643
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=5.9e-08 Score=113.93 Aligned_cols=269 Identities=15% Similarity=0.103 Sum_probs=179.3
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------C----CC-cHHHHHHH
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V--------------D----MP-GADVRLVK 141 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~--------------~----~p-~~a~~v~~ 141 (390)
+..|.....+....|+.+++.+||+++|+++++++ .|+++++.. + . .+ ..+++|..
T Consensus 67 i~~~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~ 146 (2512)
T 2vz8_A 67 VHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSF 146 (2512)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHH
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHH
Confidence 44555556667789999999999999999877653 566665543 2 0 11 26789999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCC------CCccchhhhh
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFHE------PSETHLDVLV 205 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~------~~~~~~~~~~ 205 (390)
.+|+... ++.+..+|++++.||+.|.+.|++|.++.+|+.+++.... .+.. |.|. ..
T Consensus 147 ~~~l~Gp---s~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls~~g~c~~Fd~----~a 219 (2512)
T 2vz8_A 147 FFDFKGP---SITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLSQDGTCRSFDA----EG 219 (2512)
T ss_dssp HHTCCSC---EEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBCTTCSCCSSST----TC
T ss_pred HhCCCCC---ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCCCCCCCCCCCC----CC
Confidence 9999974 6889999999999999999999999999999999997421 1111 2222 12
Q ss_pred hhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhcc
Q 036844 206 VQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSP 285 (390)
Q Consensus 206 ~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ 285 (390)
.++..|+|++++||.+-.. .. .....+.+.+......+. . +...+. .....++|+++|++
T Consensus 220 dG~~~gEG~~~~vLk~l~~-A~--~i~a~i~g~~~n~dg~~~---------~------~~t~P~--~~~q~~~i~~al~~ 279 (2512)
T 2vz8_A 220 TGYCRAEAVVAVLLTKKSL-AR--RVYATILNAGTNTDGSKE---------Q------GVTFPS--GDVQEQLIRSLYAP 279 (2512)
T ss_dssp CCBCBBCEEEEEEEEEGGG-CS--CCSEEEEEEEEEECCCCT---------T------CSSSCC--HHHHHHHHHTTSGG
T ss_pred CCcceeeeEEEEEEEEHHH-CC--cccEEEEEEEEcCCCCCC---------C------CCCCCC--HHHHHHHHHHHHHH
Confidence 4789999999999998654 21 112334433322111000 0 111121 23456789999999
Q ss_pred CCCCCCCce-eEEEcCCCHHHHH-----HHHHHcCCCcc-cchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccC-
Q 036844 286 IGISDWNSL-FYVLHPGGDGLID-----QVEKNLGLGKD-KLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATT- 357 (390)
Q Consensus 286 ~gl~~~~di-~~i~h~~~~~~~~-----~~~~~lgi~~e-~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~- 357 (390)
+|+++ ++| |+-.|..+...-+ .+.+.++-... .+..+ .+-..+||+-+|+-...|...+.. .++|.+.|
T Consensus 280 ag~~p-~~i~yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~ig-S~Ks~iGH~~~AaG~~~~ik~~l~-l~~~~ipp~ 356 (2512)
T 2vz8_A 280 AGPDP-ESLEYIEAHGTGTKVGDPQELNGIVNALCATRREPLLIG-STKSNMGHPEPASGVAALIKVLLS-LEHGVWAPN 356 (2512)
T ss_dssp GSSCT-TSCCEEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEE-CHHHHHCBCGGGHHHHHHHHHHHH-HTTTBCCCC
T ss_pred cCCCH-HHCCEEEeecCCCCCCCHHHHHHHHHHhcccCCCCceee-cccccccccccccchhHHHHHHHH-HHCCCcCCC
Confidence 99997 999 9999998765544 45566763322 22221 146788999999888777654432 11122211
Q ss_pred --------CC-----------------CCceEEEEEEcccccceeeeeEeec
Q 036844 358 --------GE-----------------GLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 358 --------G~-----------------~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
.. ...++++-+||.|.+-+.++|+-.+
T Consensus 357 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~a~vnsfG~gG~Nah~il~~~~ 408 (2512)
T 2vz8_A 357 LHYHTPNPEIPALQDGRLQVVDRPLPIRGGNVGINSFGFGGSNVHVILQPNS 408 (2512)
T ss_dssp SSCCSCCTTSSSSSSSSCEECCSCCBCCSCCEEEEEEETTTEEEEEEEEECC
T ss_pred CCCCCCCccccccccCceEecCCCccCCCCeEEEeccCCCCceeEEEEccCC
Confidence 00 0036788999999999999998654
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-06 Score=99.11 Aligned_cols=131 Identities=12% Similarity=0.040 Sum_probs=95.2
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHcCCC-CCC----cC----EEEEEecCC-C------------------------C
Q 036844 86 LDARQAMLIDEVPKLGKEAALKAIKEWGQS-VSK----IT----HLIFSAFYG-V------------------------D 131 (390)
Q Consensus 86 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~~----Id----~li~~s~~~-~------------------------~ 131 (390)
+..+.....+....|+..++.+||+++|++ |.+ |+ .+++++..+ + .
T Consensus 1200 I~~~ea~~mDp~~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~ 1279 (1887)
T 2uv8_A 1200 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESF 1279 (1887)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHS
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcch
Confidence 345555566677889999999999999994 766 22 555555422 0 1
Q ss_pred CCcHHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c-------
Q 036844 132 MPGADVRLVKL-LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------F------- 193 (390)
Q Consensus 132 ~p~~a~~v~~~-lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~------- 193 (390)
.-..+.+|... ||+.. + ...+..+|++++.||+.|...|.+|.++.+|+.++|.++.. .
T Consensus 1280 ~n~~aa~is~~~lgl~G-P--~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~~~~~~f~~m~als~~~~e~ 1356 (1887)
T 2uv8_A 1280 INTMSAWVNMLLISSSG-P--IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEF 1356 (1887)
T ss_dssp TTHHHHHHHHHTTCCCS-C--CCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCHHHHH
T ss_pred hhHHHHHHHHHHcCCcc-c--eEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhh
Confidence 12356778774 99986 3 67899999999999999999999999999999999985420 0
Q ss_pred ---------CCCCccchhhhhhhhhhccCcEEEEeccCC
Q 036844 194 ---------HEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 194 ---------~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
..|.+. ...+++.||||+++||.+..
T Consensus 1357 ~~g~~p~~~~RPfd~----~r~Gfv~gEGag~vVL~~~~ 1391 (1887)
T 2uv8_A 1357 EHGRTPAEMSRPATT----TRNGFMEAQGAGIQIIMQAD 1391 (1887)
T ss_dssp HTTCCGGGSCCTTBT----TCCSBCBBCEEEEEEEEEHH
T ss_pred cccCCCccCcCCCcc----cCCCcccccceEEEEEccHH
Confidence 011111 12468899999999998743
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.65 E-value=7.2e-09 Score=113.17 Aligned_cols=125 Identities=13% Similarity=0.052 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHHHHHHcCCC-CCCc----C----EEEEEecCC-CC-----------------------CC-cHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQS-VSKI----T----HLIFSAFYG-VD-----------------------MP-GADVRLVK 141 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~-~~~I----d----~li~~s~~~-~~-----------------------~p-~~a~~v~~ 141 (390)
....|+..|+.+||+++|++ |.++ + .++++++.+ +. .+ ..+.++..
T Consensus 1011 P~qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~ 1090 (1688)
T 2pff_A 1011 PITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNM 1090 (1688)
T ss_dssp SSTTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHH
Confidence 45779999999999999997 5542 1 444444332 10 12 34567777
Q ss_pred -HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----cCC----------------CCccc
Q 036844 142 -LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----FHE----------------PSETH 200 (390)
Q Consensus 142 -~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----~~~----------------~~~~~ 200 (390)
.||+.. + ++.+..+|++++.||++|...|++|.++.+|+.++|.++.. |.. |+...
T Consensus 1091 ~~LGl~G-P--s~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~c 1167 (1688)
T 2pff_A 1091 LLISSSG-P--IKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMS 1167 (1688)
T ss_dssp SSCCCCC-C--CCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSC
T ss_pred HHcCCcC-C--eEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHHHHHHHHhccccccChhhhhcCCChhhcc
Confidence 689875 3 78899999999999999999999999999999999986521 100 11100
Q ss_pred h--hhhhhhhhhccCcEEEEeccCC
Q 036844 201 L--DVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 201 ~--~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
+ +....++++||||+++||.+..
T Consensus 1168 RPFd~~rdGfv~GEGAGavVLesle 1192 (1688)
T 2pff_A 1168 RPATTTRNGFMEAQGAGIQIIMQAD 1192 (1688)
T ss_dssp CSSSSSCCCCCCCSCCEEEEEECSH
T ss_pred CcCccCCCCCccccceEEEEeCcHH
Confidence 0 0012468899999999998754
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-06 Score=97.37 Aligned_cols=131 Identities=14% Similarity=0.026 Sum_probs=93.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCCC-CCC----cC----EEEEEecCC--------------------CCC----C-c
Q 036844 89 RQAMLIDEVPKLGKEAALKAIKEWGQS-VSK----IT----HLIFSAFYG--------------------VDM----P-G 134 (390)
Q Consensus 89 ~~~~~~~~~~~la~~Aa~~aL~~ag~~-~~~----Id----~li~~s~~~--------------------~~~----p-~ 134 (390)
+.....+....|+..++.+||+++|++ |.+ |+ .+++++..+ +.. + .
T Consensus 1178 ~ea~~mDp~~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~ 1257 (1878)
T 2uv9_A 1178 DIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNT 1257 (1878)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHH
Confidence 344445667789999999999999997 665 22 555555422 111 1 2
Q ss_pred HHHHHHHH-cCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cC---------
Q 036844 135 ADVRLVKL-LGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLD----------FH--------- 194 (390)
Q Consensus 135 ~a~~v~~~-lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~--------- 194 (390)
.+.+|... ||+.. + ...+..+|++++.||++|...|.+|.++.+||.++|.++.. ..
T Consensus 1258 ~aa~vs~~~lg~~G-P--~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~~~~~~f~~m~als~~~de~a~g 1334 (1878)
T 2uv9_A 1258 MAAWVNMLLLSSTG-P--IKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARG 1334 (1878)
T ss_dssp HHHHHHHHTCCCCC-C--BCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCHHHHHHHHHHTCBCCHHHHHTTT
T ss_pred HHHHHHHHhcCCCC-C--eEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCChHHHHHHHHhhhhccchhhhhcC
Confidence 56788774 89886 3 67899999999999999999999999999999999986410 00
Q ss_pred -CCCccch--hhhhhhhhhccCcEEEEeccC
Q 036844 195 -EPSETHL--DVLVVQAVFGDGAGAAIIGAG 222 (390)
Q Consensus 195 -~~~~~~~--~~~~~~~lfGDgAaA~vl~~~ 222 (390)
+|++..+ +....+++.|||++++||.+.
T Consensus 1335 ~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~ 1365 (1878)
T 2uv9_A 1335 REPGEMSRPTSTTRNGFMESQGCGVQVIMTA 1365 (1878)
T ss_dssp CCTTSSCCSSBTTCCCBCBBCEEEEEEEEEH
T ss_pred CCcccCcCCCccCCCCCcccceeEEEEEeeH
Confidence 0111100 011247889999999999874
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=94.62 E-value=0.074 Score=50.16 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccce-------e-ecc--------ccc
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLM-------I-YNQ--------GCY 160 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~-------~-i~~--------~C~ 160 (390)
....|++.+++.|+++|++++|+|.|+-.-. .+.--.+...+..++|++.... .. + -++ ||+
T Consensus 205 maPaA~~ti~~~l~d~g~~~~d~D~ivtgdL-~q~g~~il~~l~~~~g~~~~~~-~~dcg~~iy~~~~~~~~ggsg~~cs 282 (347)
T 3lma_A 205 MAPAAADTIKQHLEDLGRTPDDYDLILTGDL-SGVGSPILKDLLKEEGINVGTK-HNDCGLMIYTPDQQVFAGGSGCACS 282 (347)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEESC-HHHHHHHHHHHHHHTTCCCGGG-EEEGGGTSSCC---------CCCCH
T ss_pred chHHHHHHHHHHHHHhCCCHHHcCEEecCCh-HHHHHHHHHHHHHHcCCChhHC-ccccceEEecCCCcccCCCCccccH
Confidence 3445666679999999999999999985321 1122235567888888875321 11 2 123 666
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeecc
Q 036844 161 MGGTVIRLAKDIAENNPGARVLVVCSDIR 189 (390)
Q Consensus 161 ~~~~al~~A~~ll~~g~~~~vLvv~~d~~ 189 (390)
..+..=.+-.. |+.|..++||+|+.-..
T Consensus 283 a~v~~~~~~~~-~~~g~~~ril~~~tGal 310 (347)
T 3lma_A 283 AVVTFAHIFKE-IEAGRLNRVLVVATGAL 310 (347)
T ss_dssp HHHHHHTHHHH-HHTTSCSEEEEEEEEEC
T ss_pred HHHHHHHHHHH-HhcCcccEEEEEecccc
Confidence 66655555555 66788899999987764
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.18 Score=47.38 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKD 171 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~ 171 (390)
...+...++++++|+++|++++|||.++.-. .-+..-..++++||++.... ...+ +.++++...+|. .
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq----~~~~i~~~~~~~lgl~~~~~-~~~l~~~GNt~sasi~~~L~---~ 302 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPHQ----ANIRIMQSTCRKLGLPQERM-IVTVGEHGNTSAASIPLALD---V 302 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEECC----SCHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHhCCCHHHh-hhhHHhcCchHHHHHHHHHH---H
Confidence 3456667889999999999999999887532 22234578889999987542 1222 335555555554 3
Q ss_pred HHHcC---CCCeEEEEE
Q 036844 172 IAENN---PGARVLVVC 185 (390)
Q Consensus 172 ll~~g---~~~~vLvv~ 185 (390)
+++.+ +.+++|+++
T Consensus 303 ~~~~g~~~~Gd~vll~~ 319 (333)
T 4dfe_A 303 AVRDGRIKRGQNVLIEG 319 (333)
T ss_dssp HHHTTCSCTTCEEEEEE
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 44444 357888877
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=93.59 E-value=0.26 Score=46.52 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKD 171 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~ 171 (390)
...+...++++++|+++|++++|||.++. +.. -+..-..++++||++.... ...+ +.++++...+|..+..
T Consensus 243 ~~~~~~~~~i~~~l~~~gl~~~did~~v~-Hq~---~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~ 317 (345)
T 3s21_A 243 EGIKLAQKTFVAAKQVLGWAVEELDQFVI-HQV---SRPHTAAFVKSFGIDPAKV-MTIFGEHGNIGPASVPIVLSKLKE 317 (345)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGCSEEEE-CCS---CHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEe-CCC---CHHHHHHHHHHcCcCHHHc-eeeHhhcCchHHHHHHHHHHHHHH
Confidence 34566678889999999999999999886 322 2234567889999987542 1111 4455666666654433
Q ss_pred HHHcCCCCeEEEEEee
Q 036844 172 IAENNPGARVLVVCSD 187 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d 187 (390)
-=+-.+.+++|+++.-
T Consensus 318 ~g~~~~Gd~vll~~~G 333 (345)
T 3s21_A 318 LGRLKKGDRIALLGIG 333 (345)
T ss_dssp HTCCCTTCEEEEEEEE
T ss_pred cCCCCCCCEEEEEEEC
Confidence 2111245788888743
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=0.24 Score=47.12 Aligned_cols=82 Identities=16% Similarity=0.096 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
..+...++++++|+++|++++|||.++... .-...-..++++||++.... ...+ +.++++...+|..+..-
T Consensus 252 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sAsi~l~L~~~~~~ 326 (359)
T 3h78_A 252 ASQTLVRIAGEMLAAHELTLDDIDHVICHQ----PNLRILDAVQEQLGIPQHKF-AVTVDRLGNMASASTPVTLAMFWPD 326 (359)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCcCHHHh-hhhhhcccchHHHHHHHHHHHHHHh
Confidence 455667889999999999999999987532 22334578889999987542 2121 44666666676554433
Q ss_pred HHcCCCCeEEEEE
Q 036844 173 AENNPGARVLVVC 185 (390)
Q Consensus 173 l~~g~~~~vLvv~ 185 (390)
-.+.+++|+++
T Consensus 327 --l~~Gd~vll~~ 337 (359)
T 3h78_A 327 --IQPGQRVLVLT 337 (359)
T ss_dssp --SCTTCEEEEEE
T ss_pred --CCCCCEEEEEE
Confidence 33467888887
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=93.20 E-value=0.35 Score=45.16 Aligned_cols=82 Identities=9% Similarity=-0.021 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
..+...++++++|+++|++++|||.++.-. .-+..-..++++||++.... ...+ +.++++...+|.. +
T Consensus 222 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~lgl~~ek~-~~~l~~~GNt~sasi~~~L~~---~ 293 (323)
T 3il3_A 222 AVRELSNVVEETLLANNLDKKDLDWLVPHQ----ANLRIITATAKKLEMDMSQV-VVTLDKYANNSAATVPVALDE---A 293 (323)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTCCEEEECC----SCHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHcCcCHHHh-hccHhhcCchHHHHHHHHHHH---H
Confidence 455667889999999999999999887533 22334578889999987642 2222 3455555555543 3
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.| +.+++|+++.
T Consensus 294 ~~~g~~~~Gd~vll~~~ 310 (323)
T 3il3_A 294 IRDGRIQRGQLLLLEAF 310 (323)
T ss_dssp HHTTSSCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 4578888773
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=93.16 E-value=0.3 Score=45.61 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc-e-ee-ccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL-M-IY-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~-~-~i-~~~C~~~~~al~~A~~ll 173 (390)
..+...++++++|+++|++++|||.++. +.+. ...-..+.+.||++....+. + .+ +.++++...+|. .++
T Consensus 222 ~~~~~~~~i~~aL~~agl~~~did~~~~-H~~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gnt~sAs~~~~L~---~~~ 294 (331)
T 2x3e_A 222 AVTQMSDSVRRVLDRVGWQASDLHHLVP-HQAN---TRILAAVADQLDLPVERVVSNIAEVGNTVAASIPLALA---HGL 294 (331)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEE-CCCC---HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHH---HHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-cCCC---HHHHHHHHHHcCCCHHHHhhhHhhhCcHHHHHHHHHHH---HHH
Confidence 4466778899999999999999998876 3222 12234688899997543211 1 12 345555555554 334
Q ss_pred HcC---CCCeEEEEEe
Q 036844 174 ENN---PGARVLVVCS 186 (390)
Q Consensus 174 ~~g---~~~~vLvv~~ 186 (390)
+.+ +.+++|+++.
T Consensus 295 ~~~~~~~G~~vll~~~ 310 (331)
T 2x3e_A 295 RQGILRDGGNMVLTGF 310 (331)
T ss_dssp HTTCSCTTCEEEEEEE
T ss_pred HhCCCCCCCEEEEEEE
Confidence 444 3568887763
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=93.13 E-value=0.32 Score=46.29 Aligned_cols=82 Identities=12% Similarity=0.024 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
..+...++++++|+++|++++|||.++.-. .-...-..++++||++.... ...+ +.++++...+|. .+
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~n~~i~~~~~~~Lgl~~ek~-~~~l~~~GNtssAsipl~L~---~~ 335 (365)
T 3gwa_A 264 SLAEVPRAADRLLALAGEPRENIDCFVLHQ----ANRFMLDALRKKMKIPEHKF-PVLMEHCGNTVSSTLPLALE---TM 335 (365)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHHTCCGGGS-CCCCTTTCBCGGGHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC----CCHHHHHHHHHHhCCCHHHH-HHHHhcccchHHHHHHHHHH---HH
Confidence 456667889999999999999999987532 22234578889999987642 2211 334455555543 34
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.| +.+++|+++.
T Consensus 336 ~~~g~~~~Gd~vll~~f 352 (365)
T 3gwa_A 336 RANGTLARGMRLMLLGF 352 (365)
T ss_dssp HHTTCCCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4554 3578888873
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=92.93 E-value=0.38 Score=44.38 Aligned_cols=83 Identities=12% Similarity=0.065 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc-ee-e-ccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL-MI-Y-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~-~~-i-~~~C~~~~~al~~A~~ll 173 (390)
..+-..++++++|+++|++++|||.++... +. ......+.+.||++....+. .. + +.++++.+.+|.. ++
T Consensus 210 ~~~~~~~~i~~al~~agl~~~did~~~~H~-~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~as~~~~L~~---~~ 282 (313)
T 1zow_A 210 AVRIMGDASTRVVEKANLTSDDIDLFIPHQ-AN---IRIMESARERLGISKDKMSVSVNKYGNTSAASIPLSIDQ---EL 282 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSEEEECC-SC---HHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHhCCCHHHHHHhHhhhCchHHHHHHHHHHH---HH
Confidence 345677889999999999999999887533 22 12234567889987543211 11 1 3455666666543 34
Q ss_pred HcC---CCCeEEEEEe
Q 036844 174 ENN---PGARVLVVCS 186 (390)
Q Consensus 174 ~~g---~~~~vLvv~~ 186 (390)
+.+ +.+++|+++.
T Consensus 283 ~~~~~~~g~~vl~~~~ 298 (313)
T 1zow_A 283 KNGKLKDDDTIVLVGF 298 (313)
T ss_dssp HTTCCCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 444 3577877763
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=92.89 E-value=0.4 Score=44.38 Aligned_cols=83 Identities=12% Similarity=0.007 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccccee---e-ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMI---Y-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~---i-~~~C~~~~~al~~A~~l 172 (390)
..+-..++++++|+++|++++|||.++. +.+. ......+.+.||++.... ... + +.++++...+|.. +
T Consensus 216 ~~~~~~~~i~~aL~~agl~~~did~v~~-H~~~---~~~~d~i~~~lg~~~~~~-~~~~~~~Gn~~~As~~~~L~~---~ 287 (317)
T 1hnj_A 216 AVTELAHIVDETLAANNLDRSQLDWLVP-HQAN---LRIISATAKKLGMSMDNV-VVTLDRHGNTSAASVPCALDE---A 287 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEE-CCSC---HHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-cCCC---HHHHHHHHHHcCCCHHHh-HhhHhhhCcHHHHHHHHHHHH---H
Confidence 3446678899999999999999998875 3332 112346788999976432 111 1 4455666666543 3
Q ss_pred HHcC---CCCeEEEEEee
Q 036844 173 AENN---PGARVLVVCSD 187 (390)
Q Consensus 173 l~~g---~~~~vLvv~~d 187 (390)
++.+ +.+++|+++.-
T Consensus 288 ~~~~~~~~G~~vll~~~G 305 (317)
T 1hnj_A 288 VRDGRIKPGQLVLLEAFG 305 (317)
T ss_dssp HHTTCSCTTCEEEEEEEE
T ss_pred HHhCCCCCCCEEEEEEEc
Confidence 4444 45788888744
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=92.85 E-value=0.26 Score=46.75 Aligned_cols=82 Identities=12% Similarity=0.030 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccccee----eccccchHHHHHHHHHH-
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMI----YNQGCYMGGTVIRLAKD- 171 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~----i~~~C~~~~~al~~A~~- 171 (390)
..+...++++++|+++|++++|||.++... .-...-..++++||++.... ... -+.++++...+|..+..
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~ek~-~~~l~~~GNt~sasi~~~L~~~~~~ 316 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFHQ----ANLFMLKHLAKKAGLPAERV-PVNIGEYGNTSCASIPLLITTELKD 316 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC----CCHHHHHHHHHHTTCCGGGS-CCCHHHHCBCGGGHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHhCcCHHHH-HHHHhhhCcHHHHHHHHHHHHHHHh
Confidence 456667889999999999999999987633 22234577889999987642 111 14566777777765532
Q ss_pred -HHHcCCCCeEEEEE
Q 036844 172 -IAENNPGARVLVVC 185 (390)
Q Consensus 172 -ll~~g~~~~vLvv~ 185 (390)
.++. .+++|+++
T Consensus 317 g~~~~--Gd~vll~~ 329 (354)
T 4efi_A 317 RLKEE--TLQLGMFG 329 (354)
T ss_dssp HHHHS--CEEEEEEE
T ss_pred CCCCC--CCEEEEEE
Confidence 3443 46888877
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=92.82 E-value=0.31 Score=45.98 Aligned_cols=85 Identities=14% Similarity=-0.042 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccccee---e-ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMI---Y-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~---i-~~~C~~~~~al~~A~~l 172 (390)
......++++++|+++|++++|||.+++-. .-...-..++++||++........ + +.++++...+|..+..-
T Consensus 247 a~~~~~~~i~~~L~~~gl~~~did~~v~Hq----~~~~i~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L~~~~~~ 322 (350)
T 4ewp_A 247 AVWSMAKVAREALDAAGVEPEDLAAFIPHQ----ANMRIIDEFAKQLKLPESVVVARDIADAGNTSAASIPLAMHRLLEE 322 (350)
T ss_dssp HHHTHHHHHHHHHHHHTCCGGGEEEEEECC----SCHHHHHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHhhcCChhHhceEEecC----CCHHHHHHHHHHcCcChHhEEecccccccchHHHHHHHHHHHHHHh
Confidence 445567889999999999999999987532 233345678899999875421111 1 34556666666443321
Q ss_pred HHcCCCCeEEEEE
Q 036844 173 AENNPGARVLVVC 185 (390)
Q Consensus 173 l~~g~~~~vLvv~ 185 (390)
=+-.+.+++|+++
T Consensus 323 g~~~~Gd~vll~~ 335 (350)
T 4ewp_A 323 NPELSGGLALQIG 335 (350)
T ss_dssp CGGGTTSEEEEEE
T ss_pred CCCCCcCEEEEEE
Confidence 1112457888876
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=92.66 E-value=0.42 Score=44.78 Aligned_cols=83 Identities=16% Similarity=0.037 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCc-ccc-ce-ee-ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPS-VNR-LM-IY-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~-~~~-~~-~i-~~~C~~~~~al~~A~~l 172 (390)
..+-..++++++|+++|++++|||.++. +.+. ......+.+.||++.. ... .+ .+ +.++++...+|. .+
T Consensus 229 ~~~~~~~~i~~aL~~agl~~~did~v~~-H~~~---~~~~d~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~---~~ 301 (339)
T 1mzj_A 229 AVADVVPAAREALEVAGLTVGDLVAFVP-HQAN---LRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALD---RL 301 (339)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEE-CCSC---HHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEE-CCCC---HHHHHHHHHHhCCCccceeeehhhhcCchHHHHHHHHHH---HH
Confidence 3456678899999999999999998876 3332 1123468889999865 311 11 12 335555555554 33
Q ss_pred HHcC---CCCeEEEEEe
Q 036844 173 AENN---PGARVLVVCS 186 (390)
Q Consensus 173 l~~g---~~~~vLvv~~ 186 (390)
++.+ +.+++|+++.
T Consensus 302 ~~~g~~~~G~~vll~~~ 318 (339)
T 1mzj_A 302 VRSGAVPGGGPALMIGF 318 (339)
T ss_dssp HHHTSSCTTCEEEEEEE
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4444 3568887763
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=92.53 E-value=0.47 Score=43.64 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc-e-ee-ccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL-M-IY-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~-~-~i-~~~C~~~~~al~~A~~ll 173 (390)
..+...++++++|+++|++++|||.++... +. ......+.+.||++....+. . .+ +.++++.+.+|..+ +
T Consensus 208 ~~~~~~~~i~~al~~agl~~~did~~~~H~-~~---~~~~~~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~---~ 280 (309)
T 2ebd_A 208 AVRSMEEVCREVLEKAGVKPEEVSLVIPHQ-AN---VRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEA---I 280 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC-SC---HHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHH---H
Confidence 445677899999999999999999877533 22 11224578899987543211 1 11 34556666555433 4
Q ss_pred HcC---CCCeEEEEEe
Q 036844 174 ENN---PGARVLVVCS 186 (390)
Q Consensus 174 ~~g---~~~~vLvv~~ 186 (390)
+.+ +.+++|+++.
T Consensus 281 ~~g~~~~G~~~l~~~~ 296 (309)
T 2ebd_A 281 KEGKVKRGDLILMTAM 296 (309)
T ss_dssp HTTCCCTTCEEEEEEE
T ss_pred HcCCCCCCCEEEEEEE
Confidence 444 3578887764
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=92.39 E-value=0.4 Score=44.73 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCc-ccccee---e-ccccchHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPS-VNRLMI---Y-NQGCYMGGTVIRLAKD 171 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~-~~~~~~---i-~~~C~~~~~al~~A~~ 171 (390)
......++++++|+++|++++|||.++...+ .......+.+.||++.. .. ... + +.++++...+|..+..
T Consensus 230 ~~~~~~~~i~~al~~agl~~~dId~~~~H~~----~~~~~~~~~~~lg~~~~~~~-~~~~~~~Gnt~sAs~~~~L~~~~~ 304 (335)
T 1u6e_A 230 AAFKMGDVGRRAMDAAGVRPDQIDVFVPHQA----NSRINELLVKNLQLRPDAVV-ANDIEHTGNTSAASIPLAMAELLT 304 (335)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEECCS----CHHHHHHHHHHHTCCTTCEE-CCTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCchhhh-hhhhhhhCcHHHHHHHHHHHHHHH
Confidence 3556778899999999999999998876332 22233457889999765 21 111 1 3455555555543322
Q ss_pred HHHcCCCCeEEEEEe
Q 036844 172 IAENNPGARVLVVCS 186 (390)
Q Consensus 172 ll~~g~~~~vLvv~~ 186 (390)
--+..+.+++|+++.
T Consensus 305 ~~~~~~g~~~l~~~~ 319 (335)
T 1u6e_A 305 TGAAKPGDLALLIGY 319 (335)
T ss_dssp HTSSCTTCEEEEEEE
T ss_pred cCCCCCCCEEEEEEE
Confidence 111123578887764
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=91.38 E-value=0.77 Score=42.53 Aligned_cols=82 Identities=18% Similarity=0.116 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-cee-e-ccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-LMI-Y-NQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-~~~-i-~~~C~~~~~al~~A~~ll 173 (390)
..+-..++++++|+++|++++|||.++... +. ......+.+.||++..... ... + +.++++.+.+|.. ++
T Consensus 218 ~~~~~~~~i~~al~~agl~~~did~~~~H~-~~---~~~~d~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~---~l 290 (322)
T 1ub7_A 218 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQ-AN---LRIIDAARERLGLPWERVAVNVDRYGNTSTASIPLALKE---AV 290 (322)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC-SC---HHHHHHHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcC-CC---HHHHHHHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHH---HH
Confidence 446677899999999999999999887633 32 1122357788998754311 111 1 3344555555433 34
Q ss_pred HcC---CCCeEEEEE
Q 036844 174 ENN---PGARVLVVC 185 (390)
Q Consensus 174 ~~g---~~~~vLvv~ 185 (390)
+.+ +.+++|+++
T Consensus 291 ~~g~~~~g~~~l~~~ 305 (322)
T 1ub7_A 291 DAGRIREGDHVLLVS 305 (322)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HhCCCCCCCEEEEEE
Confidence 444 346777765
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=90.07 E-value=0.44 Score=45.19 Aligned_cols=82 Identities=24% Similarity=0.253 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-----ccccchHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-----NQGCYMGGTVIRLAK 170 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-----~~~C~~~~~al~~A~ 170 (390)
.......++++++|+++|++++|||.+|+.+....... .++++||++.... ...+ +.++++...+|..+
T Consensus 235 ~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~~~----~~~~~lgl~~ek~-~~~~~~~~GNt~aAsipl~L~~~- 308 (357)
T 3s3l_A 235 RYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGTGH----ELHDLLGLPDERT-SWAYGRTTGHVGAGDQYAGLAHL- 308 (357)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCSSC----CHHHHHTSCGGGB-THHHHHHHCBCTTCHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHHHH----HHHHHcCCCHHHh-HHHhccccccchHhHHHHHHHHH-
Confidence 45667788999999999999999999986455442233 4668899987653 2222 22455555666443
Q ss_pred HHHHcC---CCCeEEEEE
Q 036844 171 DIAENN---PGARVLVVC 185 (390)
Q Consensus 171 ~ll~~g---~~~~vLvv~ 185 (390)
++.| +.+++|+++
T Consensus 309 --~~~g~l~~Gd~vll~~ 324 (357)
T 3s3l_A 309 --VENALVQPGDRVLLFG 324 (357)
T ss_dssp --HHTTCCCTTCEEEEEC
T ss_pred --HHcCCCCCCCEEEEEE
Confidence 3443 346777766
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=89.80 E-value=0.7 Score=44.30 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----e-eec-cccchHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----M-IYN-QGCYMGGTVIRLAK 170 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~-~i~-~~C~~~~~al~~A~ 170 (390)
..+-..++++++|+++|++++|||.++. +... ...-..+.++||++...... . .++ .++++...+| .
T Consensus 285 ~~~~~~~~i~~aL~~agl~~~dId~~~~-H~~~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L---~ 357 (393)
T 1ted_A 285 IFSGVAPVVTEMLWDNGLQISDIDLWAI-HPGG---PKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E 357 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEE-CCSC---HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCCEEEE-CCCc---HHHHHHHHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHH---H
Confidence 4456677889999999999999998876 3322 22335688899998764210 1 122 2333333443 3
Q ss_pred HHHHcC----CCCeEEEEEe
Q 036844 171 DIAENN----PGARVLVVCS 186 (390)
Q Consensus 171 ~ll~~g----~~~~vLvv~~ 186 (390)
.+++.+ +.+++|+++.
T Consensus 358 ~~~~~g~~~~~Gd~vll~~~ 377 (393)
T 1ted_A 358 TMVQQAESAKAISTGVAFAF 377 (393)
T ss_dssp HHHHSCSSSSSSEEEEEEEE
T ss_pred HHHhcCccCCCCCeEEEEEe
Confidence 444554 3467777763
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=89.55 E-value=0.94 Score=43.47 Aligned_cols=79 Identities=15% Similarity=0.107 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLM------IYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~------~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+.+.. ........+.+.||+...+.... .-..||+|....+.+..+|-.
T Consensus 296 ~~~ai~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~ 371 (395)
T 4e1l_A 296 PIPATRKALKKAGLSINDIDLIEANE----AFAAQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQK 371 (395)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hhHHHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHh
Confidence 45789999999999999999998522 22334456778899875431111 112256666666666666555
Q ss_pred cCCCCeEEEE
Q 036844 175 NNPGARVLVV 184 (390)
Q Consensus 175 ~g~~~~vLvv 184 (390)
.+ .++.|+.
T Consensus 372 ~~-~~~gl~~ 380 (395)
T 4e1l_A 372 RK-VETGLAT 380 (395)
T ss_dssp HT-CSEEEEE
T ss_pred cC-CCEEEEE
Confidence 44 4666654
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=87.57 E-value=0.88 Score=43.43 Aligned_cols=79 Identities=24% Similarity=0.284 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----e-ee-ccccchHHHHHHHHHHH
Q 036844 99 KLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----M-IY-NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~-~i-~~~C~~~~~al~~A~~l 172 (390)
+-.. +++++|+++|++++|||.++.-.. . ......+.++||++...... . .+ +.++++...+| ..+
T Consensus 253 ~~~~-~i~~aL~~agl~~~dId~v~~H~~-~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L---~~~ 324 (382)
T 1u0m_A 253 PLAP-ALKELAGEHGWDASDLDFYIVHAG-G---PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL---RRL 324 (382)
T ss_dssp HHHH-HHHHHHHTTSCCSSCCSCCEEECS-H---HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH---HHH
T ss_pred HHHH-HHHHHHHHcCCCHHHCCEEEECCC-C---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHH---HHH
Confidence 3344 899999999999999998876332 2 12234688899998754211 1 11 33444444444 344
Q ss_pred HHcC---CCCeEEEEE
Q 036844 173 AENN---PGARVLVVC 185 (390)
Q Consensus 173 l~~g---~~~~vLvv~ 185 (390)
++.+ +.+++|+++
T Consensus 325 ~~~g~~~~Gd~vll~~ 340 (382)
T 1u0m_A 325 FDEGGVEEGARGLLAG 340 (382)
T ss_dssp HHSCCCCSSCCCEEEE
T ss_pred HHhcCCCCCCEEEEEE
Confidence 4555 345666655
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=87.51 E-value=0.91 Score=43.62 Aligned_cols=85 Identities=14% Similarity=0.068 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHc-CC--CCcccc-ce-e-eccccchHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLL-GL--KPSVNR-LM-I-YNQGCYMGGTVIRLA 169 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~l-gl--~~~~~~-~~-~-i~~~C~~~~~al~~A 169 (390)
.......++++++|+++|++++|||.++. +. .-+..-..++++| |+ +....+ .+ . -+.++++...+|..+
T Consensus 288 ~a~~~~~~~i~~~L~~~gl~~~dId~~v~-Hq---an~~i~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~~ 363 (392)
T 3led_A 288 EVVPLVSEMIIEHAREIGIDPHGLKRMWL-HQ---ANINMNEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHKH 363 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEE-CS---SCHHHHHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEE-cC---CCHHHHHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHHH
Confidence 45667788899999999999999998875 32 2223445677775 75 332210 11 1 144566666666554
Q ss_pred HHHHHcCCCCeEEEEEe
Q 036844 170 KDIAENNPGARVLVVCS 186 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~ 186 (390)
...+ .+.+++|+++.
T Consensus 364 ~~~~--~~Gd~vll~gf 378 (392)
T 3led_A 364 QDDM--AQGDLGLICSF 378 (392)
T ss_dssp CTTC--CTTCEEEEEEE
T ss_pred hCCC--CCCCEEEEEEE
Confidence 2222 23467777763
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=85.41 E-value=2.2 Score=40.76 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+-... .....+-.+.+.||+...+.. .+.--.|++|....+..+.+| +
T Consensus 292 ~~~a~~~al~~agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L-~ 366 (392)
T 2vu1_A 292 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEM-K 366 (392)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----ccHHHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHH-h
Confidence 46899999999999999999887521 222233346788998643210 111223455555555555554 4
Q ss_pred cCCCCeEEE
Q 036844 175 NNPGARVLV 183 (390)
Q Consensus 175 ~g~~~~vLv 183 (390)
....++.|+
T Consensus 367 ~~~~~~gl~ 375 (392)
T 2vu1_A 367 RRGARKGLA 375 (392)
T ss_dssp HHTCSEEEE
T ss_pred ccCCCEEEE
Confidence 334566665
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=85.19 E-value=1.6 Score=41.79 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccce------eeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLM------IYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~------~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+.+.. ........+.+.||+...+.... ....||+|....+.+..+|-.
T Consensus 294 ~~~a~~~al~~agl~~~dId~ve~~d----~fa~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~ 369 (394)
T 3ss6_A 294 PAPAIRKGLEKVDWSLEDADLLEINE----AFAAQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKR 369 (394)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeCC----chHHHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHh
Confidence 47889999999999999999998522 22234556778899875431111 111234544455555555444
Q ss_pred cCCCCeEEEE
Q 036844 175 NNPGARVLVV 184 (390)
Q Consensus 175 ~g~~~~vLvv 184 (390)
. ..++.|+.
T Consensus 370 ~-~~~~gl~~ 378 (394)
T 3ss6_A 370 R-GLEKGIAS 378 (394)
T ss_dssp H-TCCEEEEE
T ss_pred c-CCCEEEEE
Confidence 3 35666653
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=84.63 E-value=3 Score=41.60 Aligned_cols=82 Identities=17% Similarity=0.127 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee--------ccccchHHHHHHHHHH
Q 036844 100 LGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY--------NQGCYMGGTVIRLAKD 171 (390)
Q Consensus 100 la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i--------~~~C~~~~~al~~A~~ 171 (390)
-...|++++|+++|++++|||++=+.. .++...-...+.||+...-..-..+ +...++++.++--+..
T Consensus 318 ~~~~a~~~al~~agl~~~did~~E~~d----AF~~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~ 393 (520)
T 4egv_A 318 ASVTAVNEALRVAGIGLDDVAAFDLYS----CFPFPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVN 393 (520)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEEECC----SSSHHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEEeC----CcHHHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHH
Confidence 346789999999999999999886644 4566667788899985431101112 1234556666666666
Q ss_pred HHHcCCCCeEEEEE
Q 036844 172 IAENNPGARVLVVC 185 (390)
Q Consensus 172 ll~~g~~~~vLvv~ 185 (390)
-|+.+..++.|+.+
T Consensus 394 ~lr~~~~~~~L~~~ 407 (520)
T 4egv_A 394 EMRDKPGQFALVGA 407 (520)
T ss_dssp HHHHSTTCEEEEEE
T ss_pred HHhcCCCCceEEeC
Confidence 66777778888754
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=83.90 E-value=1.8 Score=41.49 Aligned_cols=79 Identities=13% Similarity=0.140 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc------eeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL------MIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~------~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+-+.. ........+.+.||+...+... +..-.||+|....+.++.+|-.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ve~~d----~f~~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~ 372 (396)
T 4dd5_A 297 PVPATKKALEAANMTIEDIDLVEANE----AFAAQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKR 372 (396)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----hHHHHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHh
Confidence 47889999999999999999987522 2223445567788876532101 1111245555555555555544
Q ss_pred cCCCCeEEEE
Q 036844 175 NNPGARVLVV 184 (390)
Q Consensus 175 ~g~~~~vLvv 184 (390)
. ..++.|+.
T Consensus 373 ~-~~~~gl~~ 381 (396)
T 4dd5_A 373 R-DAKTGLAT 381 (396)
T ss_dssp H-TCSEEEEE
T ss_pred c-CCCeEEEE
Confidence 3 35666654
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=83.79 E-value=2.8 Score=45.06 Aligned_cols=76 Identities=11% Similarity=-0.088 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----e-e-eccccchHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----M-I-YNQGCYMGGTVIRLAK 170 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~-~-i~~~C~~~~~al~~A~ 170 (390)
..+...++++++|+++|++++|||.++. +.. ....-..+.++||++...... . . -+.++++...+|..+.
T Consensus 862 ~~~~~~~~~~~al~~agl~~~did~~~~-Hq~---~~~i~~~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 862 ISENVEKCLTQAFDPLGISDWNSLFWIA-HPG---GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHHGGGTCCCGGGSEEEE-CCS---CHHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCcccceEEE-CCC---ChHHHHHHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 4566778999999999999999999765 322 223456788899998754211 1 1 2557788888888776
Q ss_pred HHHHcC
Q 036844 171 DIAENN 176 (390)
Q Consensus 171 ~ll~~g 176 (390)
.-++.|
T Consensus 938 ~~~~~G 943 (979)
T 3tsy_A 938 KKSLKG 943 (979)
T ss_dssp HHHHHT
T ss_pred hhhccc
Confidence 655544
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=83.66 E-value=2.3 Score=41.01 Aligned_cols=78 Identities=13% Similarity=0.129 Sum_probs=47.7
Q ss_pred HHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHHc
Q 036844 102 KEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAEN 175 (390)
Q Consensus 102 ~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~~ 175 (390)
..|++++|+++|++++|||.+-...+ .........+.||+...+.. .+..-.|++|....+.++.+|-..
T Consensus 308 ~~a~~~al~~Agl~~~dId~~e~hda----f~~~~l~~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~ 383 (407)
T 3svk_A 308 TPATRKVLDRAGLTIDDIDLFELNEA----FASVVLKFQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR 383 (407)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCS----BHHHHHHHHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEeCh----hHHHHHHHHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999876322 22223456678998754310 011123455555555666665443
Q ss_pred CCCCeEEEE
Q 036844 176 NPGARVLVV 184 (390)
Q Consensus 176 g~~~~vLvv 184 (390)
..++.|+.
T Consensus 384 -~~~~gl~~ 391 (407)
T 3svk_A 384 -NARRALIT 391 (407)
T ss_dssp -TCCEEEEE
T ss_pred -CCCEEEEE
Confidence 34666543
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=83.57 E-value=2.7 Score=39.73 Aligned_cols=80 Identities=11% Similarity=0.003 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHcC------CCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc-----eee-ccccchHHHH
Q 036844 98 PKLGKEAALKAIKEWG------QSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL-----MIY-NQGCYMGGTV 165 (390)
Q Consensus 98 ~~la~~Aa~~aL~~ag------~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~-----~~i-~~~C~~~~~a 165 (390)
.+...++++++|+++| ++++|||.+ .+... ......+.++||++...... ..+ +.++++...+
T Consensus 266 ~~~~~~~i~~~L~~ag~~~~~~l~~~did~~--~H~~~---~~i~d~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~ 340 (374)
T 2h84_A 266 GSGIEAFVDTLLDKAKLQTSTAISAKDCEFL--IHTGG---KSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFV 340 (374)
T ss_dssp HHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE--ECCCC---HHHHHHHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccccCCChhhcCEe--ECCCC---HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHH
Confidence 4556778999999999 999999988 45433 12335688899998764210 111 3355555555
Q ss_pred HHHHHHHHHcC-CCCeEEEEE
Q 036844 166 IRLAKDIAENN-PGARVLVVC 185 (390)
Q Consensus 166 l~~A~~ll~~g-~~~~vLvv~ 185 (390)
|.. +++.+ +.+++|+++
T Consensus 341 L~~---~~~~~~~Gd~vll~~ 358 (374)
T 2h84_A 341 MDH---ARKSKSLPTYSISLA 358 (374)
T ss_dssp HHH---HHTCSCCCSEEEEEE
T ss_pred HHH---HHhhcCCCCeEEEEE
Confidence 543 33444 467788776
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=81.01 E-value=1.3 Score=42.51 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEE
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFS 125 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~ 125 (390)
...+...++.+++|+++|++++|||.+++-
T Consensus 204 ~~~~~~~~~~~~~L~~agl~~~did~~~~H 233 (396)
T 1xpm_A 204 AYIRSFQQSWNEYAKRQGKSLADFASLCFH 233 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 445667789999999999999999998864
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=80.99 E-value=2.5 Score=40.51 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc------ceeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR------LMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~------~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
...|++++|+++|++++|||.+-... ........+.+.||+...+.. .+..-.|++|....+.++.+|-.
T Consensus 297 ~~~a~~~al~~Agl~~~dId~ie~~d----~f~~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~ 372 (397)
T 1wl4_A 297 PIPAIKQAVTKAGWSLEDVDIFEINE----AFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLER 372 (397)
T ss_dssp HHHHHHHHHHHHTCCGGGCCEEEECC----SBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEec----ccHHHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhh
Confidence 46899999999999999999887422 222233456778898643210 11112244555555555555443
Q ss_pred cCCCCeEEEE
Q 036844 175 NNPGARVLVV 184 (390)
Q Consensus 175 ~g~~~~vLvv 184 (390)
. ..++.|+.
T Consensus 373 ~-~~~~gl~~ 381 (397)
T 1wl4_A 373 M-GRSRGVAA 381 (397)
T ss_dssp H-TCCEEEEE
T ss_pred c-CCCEEEEE
Confidence 3 35666654
|
| >2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A* | Back alignment and structure |
|---|
Probab=80.89 E-value=4.1 Score=39.06 Aligned_cols=85 Identities=14% Similarity=0.081 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCE----EEEEecCCCCCCcHHHHHHHHcCCCCccccc----e-ee-ccccchHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITH----LIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----M-IY-NQGCYMGGTVI 166 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~----li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~-~i-~~~C~~~~~al 166 (390)
..+...++++++|+++|++++ ||. ++. +... ...-..+.++||++...... . .+ +.++++...+|
T Consensus 288 ~~~~~~~~i~~~L~~agl~~~-id~~di~~v~-Hq~~---~~i~~~~~~~lgl~~~k~~~s~~~l~~~GNt~sAsi~~~L 362 (406)
T 2d3m_A 288 ISNNVEACLIDVFKSVGITPP-EDWNSLFWIP-HPGG---RAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYIL 362 (406)
T ss_dssp HHHHHHHHHHHHHHTTTCCCC-SSGGGSEEEE-CCSC---HHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCC-CCccceEEEE-CCCC---HHHHHHHHHHcCCCHHHHHHHHHHHHHcCCchhhHHHHHH
Confidence 455667889999999999988 887 554 3222 22335688899998754211 1 12 55667777777
Q ss_pred HHHHHHH-HcC-----CC-CeEEEEEe
Q 036844 167 RLAKDIA-ENN-----PG-ARVLVVCS 186 (390)
Q Consensus 167 ~~A~~ll-~~g-----~~-~~vLvv~~ 186 (390)
..+..-= +.| +. +++|+++.
T Consensus 363 ~~~~~~g~~~G~~~~g~~~d~vll~~f 389 (406)
T 2d3m_A 363 DEMRRKSAAKGLETYGEGLEWGVLLGF 389 (406)
T ss_dssp HHHHHHHHHTTCSBTTTTCSEEEEEEE
T ss_pred HHHHHhccccCCCccCCCcceEEEEEe
Confidence 6554322 323 11 67887763
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=80.70 E-value=3.4 Score=39.89 Aligned_cols=85 Identities=11% Similarity=0.028 Sum_probs=54.4
Q ss_pred HHHhHHHHHHHhhccCCCCCCCce-eEEEcCC----CHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH
Q 036844 271 IGKYIGKCLSNAMSPIGISDWNSL-FYVLHPG----GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV 345 (390)
Q Consensus 271 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~----~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~ 345 (390)
..+...++++++|+++|+++ +|| ++++-.. ....-..+.+.||++.+.... ...|.++++-..+|..+
T Consensus 137 ~~~La~~Aa~~AL~~agi~~-~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~------~v~~~~Cagg~~AL~~A 209 (413)
T 3v7i_A 137 VQAYGERAARGALQIAGLDV-ADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLL------PATQWACVAGTRSLALA 209 (413)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCCEEEEECCSSCCSSCHHHHHHHHTTCCTTCEEE------EESSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCH-HHCCEEEEEccCCCCcCHHHHHHHHHhCCCCCceEE------EeeCCccHHHHHHHHHH
Confidence 34556678899999999997 999 7665332 223456788999998743222 12367777777777665
Q ss_pred HHhhhhhccccCCCCCceEEEEEE
Q 036844 346 RKKSFEERKATTGEGLDCGVLFGC 369 (390)
Q Consensus 346 ~~~~~~~g~i~~G~~~d~vll~~~ 369 (390)
..- ++.|. .++||+++.
T Consensus 210 ~~~------i~ag~-~~~vLvvg~ 226 (413)
T 3v7i_A 210 ADL------VAADP-DRVVLVVIS 226 (413)
T ss_dssp HHH------HHHCT-TCEEEEEEE
T ss_pred HHH------HhcCC-CCEEEEEEE
Confidence 543 33331 167777764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 390 | ||||
| d1teda_ | 372 | c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacte | 4e-96 | |
| d1bi5a1 | 235 | c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Med | 2e-70 | |
| d1bi5a2 | 154 | c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (M | 4e-50 | |
| d1ee0a2 | 160 | c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcon | 6e-50 | |
| d1u0ua2 | 156 | c.95.1.2 (A:238-393) Dihydropinosylvin synthase {S | 4e-48 | |
| d1u0ma1 | 200 | c.95.1.2 (A:2-201) Putative polyketide synthase SC | 9e-42 | |
| d1u0ma2 | 148 | c.95.1.2 (A:202-349) Putative polyketide synthase | 2e-31 | |
| d1xpma1 | 166 | c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA | 9e-13 | |
| d1u6ea1 | 184 | c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (Fa | 4e-09 | |
| d1mzja2 | 153 | c.95.1.2 (A:184-336) Priming beta-ketosynthase fro | 4e-08 | |
| d1ub7a1 | 172 | c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH | 2e-07 | |
| d1u6ea2 | 148 | c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (Fa | 3e-07 | |
| d1hnja1 | 174 | c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH | 1e-06 | |
| d1mzja1 | 181 | c.95.1.2 (A:3-183) Priming beta-ketosynthase from | 1e-06 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 372 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 289 bits (741), Expect = 4e-96
Identities = 90/381 (23%), Positives = 168/381 (44%), Gaps = 19/381 (4%)
Query: 8 QRPA------ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPIN 61
Q P A I + T TP Q+D D R +E+ R+ ++ I
Sbjct: 2 QLPPAPPTTVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVYQKSRIT 58
Query: 62 KRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITH 121
R + + L ++ ++ R + + L + + +A+ ++I
Sbjct: 59 TRRMAV--DPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGL 116
Query: 122 LIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARV 181
L+ + G PG DV +VK LGL PS++R+++ GC + A + +P +
Sbjct: 117 LVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKA 176
Query: 182 LVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQT 241
LVVC ++ + ++ +V+ ++FGDG A +IGA E V S
Sbjct: 177 LVVCIEL--CSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQ 234
Query: 242 TIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPG 301
+ +TE+ I + GI LS ++P I + ++ + G+ + + +HPG
Sbjct: 235 LLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPG 294
Query: 302 GDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGL 361
G +I+Q ++LG+ + S VL +GN+ + S+ F+L+ + ++A + + +
Sbjct: 295 GPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV------QQAESAKAI 348
Query: 362 DCGVLFGCGPGLTVETVVLQS 382
GV F GPG+TVE ++
Sbjct: 349 STGVAFAFGPGVTVEGMLFDI 369
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 219 bits (558), Expect = 2e-70
Identities = 148/226 (65%), Positives = 179/226 (79%), Gaps = 2/226 (0%)
Query: 1 MTTVKSNQRPA--ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQ 58
++ ++ QR ATILA+GTA P NC Q+ YPDFYF+ TNSEHKTELKEKF+R+C++
Sbjct: 4 VSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKS 63
Query: 59 PINKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSK 118
I +RY +LTEEILKENPN+C Y APSLDARQ M++ EVP+LGKEAA+KAIKEWGQ SK
Sbjct: 64 MIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSK 123
Query: 119 ITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPG 178
ITHLI GVDMPGAD +L KLLGL+P V R M+Y QGC+ GGTV+RLAKD+AENN G
Sbjct: 124 ITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKG 183
Query: 179 ARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224
ARVLVVCS++ + F PS+THLD LV QA+FGDGA A I+G+ P
Sbjct: 184 ARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPV 229
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Length = 154 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Score = 163 bits (415), Expect = 4e-50
Identities = 82/154 (53%), Positives = 108/154 (70%)
Query: 232 LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDW 291
+F+++ QT PD+E I G L+E G+ HL DVP + K I K L A P+GISD+
Sbjct: 1 IFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDY 60
Query: 292 NSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFE 351
NS+F++ HPGG ++DQVE+ L L +K+ A+R VL EYGN+ +A V FILDE+RKKS +
Sbjct: 61 NSIFWIAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQ 120
Query: 352 ERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385
TTGEGL+ GVLFG GPGLT+ETVVL+S I
Sbjct: 121 NGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 154
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} Length = 160 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Score = 163 bits (414), Expect = 6e-50
Identities = 87/157 (55%), Positives = 117/157 (74%)
Query: 229 ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGI 288
ER +F+++S QT +PDTE + L+E G+ L DVP+ + K I A+SP+GI
Sbjct: 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGI 62
Query: 289 SDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348
+DWNS+F+++HPGG ++DQVE+ L L +DKL ASR+VL EYGN+ +A V FI+DEVRK+
Sbjct: 63 TDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKR 122
Query: 349 SFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385
S E K+TTGEGLDCGVLFG GPG+TVETVVL+S +
Sbjct: 123 SMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRV 159
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Score = 158 bits (402), Expect = 4e-48
Identities = 75/154 (48%), Positives = 103/154 (66%)
Query: 232 LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDW 291
F+++ QT +P++E I G+++E+G+ L VP I I C+ A S ISDW
Sbjct: 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDW 61
Query: 292 NSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFE 351
N LF+V+HPGG ++D+VE L L KL +R+V+ EYGN+ +A V FILD+ RK S +
Sbjct: 62 NKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQ 121
Query: 352 ERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385
+TTGEGL+ GVLFG GPGLT+ETVVL+S PI
Sbjct: 122 NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 155
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 200 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 143 bits (362), Expect = 9e-42
Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 12/210 (5%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
AT+ + P + + + R + R+ E + R+ E
Sbjct: 1 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQLP---LALRLIENTGVRTRHIVQPIED 57
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
E+P + R + E +A+ + + I +I+ + G
Sbjct: 58 TLEHP--------GFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFM 109
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL 191
MP L+ +G + ++ I GC GG I A D P A L+V + L
Sbjct: 110 MPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL 169
Query: 192 DFHEPSETHLDVLVVQAVFGDGAGAAIIGA 221
+ P++ + L+ +FGDG AA++
Sbjct: 170 CYQ-PTDLGVGSLLCNGLFGDGIAAAVVRG 198
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Score = 114 bits (286), Expect = 2e-31
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 233 FQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWN 292
++ IP TE++I +K G + L VP A + + L G +
Sbjct: 4 VRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVP-ATMEPLAPALKELAGEHGWDASD 62
Query: 293 SLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEE 352
FY++H GG ++D + L + SR L EYGN+ +A V ++ F+E
Sbjct: 63 LDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLD----ALRRLFDE 118
Query: 353 RKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
G G+L G GPG+T E +
Sbjct: 119 GGVEEG---ARGLLAGFGPGITAEMSLGC 144
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Score = 63.7 bits (154), Expect = 9e-13
Identities = 32/210 (15%), Positives = 52/210 (24%), Gaps = 48/210 (22%)
Query: 14 ILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILK 73
I + P ++ + + + +
Sbjct: 4 IDKINFYVPKYYV------------DMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQ--- 48
Query: 74 ENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMP 133
+ S+ A A + KI +I + VD
Sbjct: 49 --------DIVSMGANAA----------------KDIITDEDKKKIGMVIVATESAVDAA 84
Query: 134 GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDF 193
A + L R + CY I+LAKD P +VLV+ +D
Sbjct: 85 KAAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYGL 144
Query: 194 HEPSETHLDVLVVQAVFGDGAGAAIIGAGP 223
+ E G GA A +I P
Sbjct: 145 NSGGE---------PTQGAGAVAMVIAHNP 165
|
| >d1u6ea1 c.95.1.2 (A:-10-174) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 184 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 53.8 bits (128), Expect = 4e-09
Identities = 39/227 (17%), Positives = 66/227 (29%), Gaps = 49/227 (21%)
Query: 1 MTTVKSNQRP-AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQP 59
MT + + + +L+VG P TN E + + I R
Sbjct: 1 MTEIATTSGARSVGLLSVGAYRPER------------VVTNDEICQHIDSSDEWIYTRTG 48
Query: 60 INKRYFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKI 119
I R F +E EA +A+ G S + I
Sbjct: 49 IKTRRFAADDESAASMAT-------------------------EACRRALSNAGLSAADI 83
Query: 120 THLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGA 179
+I + +V + + G G + A D+ A
Sbjct: 84 DGVIVTTNTHFLQTPPAAPMVAASLGAKGILGFDLS-AGAAGFGYALGAAADMIRGGGAA 142
Query: 180 RVLVVCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224
+LVV ++ +D ++ +F DGA A ++G P
Sbjct: 143 TMLVVGTEKLSPTIDMYDRG--------NCFIFADGAAAVVVGETPF 181
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 50.1 bits (119), Expect = 4e-08
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 9/108 (8%)
Query: 273 KYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGN 332
+ A+ G++ + + +V H +ID + LG+ + + + + GN
Sbjct: 48 ADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVPEHVVVS--RDAEDTGN 105
Query: 333 VGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVL 380
+ASV LD + G ++ G G GL+ L
Sbjct: 106 TSSASVALALDRL----VRSGAVPGG---GPALMIGFGAGLSYAGQAL 146
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Score = 48.3 bits (114), Expect = 2e-07
Identities = 31/215 (14%), Positives = 68/215 (31%), Gaps = 49/215 (22%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
+ ILA+G P TN++ + L + I R I +R +E
Sbjct: 1 SGILALGAYVPER------------VMTNADFEAYLDTSDEWIVTRTGIKERRVAAEDEY 48
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
+ ++ ++ + +I +
Sbjct: 49 TSDLAFKAVE-------------------------DLLRRHPGALEGVDAVIVATNTPDA 83
Query: 132 MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI--R 189
+ LV+ + ++ ++ A + E +VL V ++ +
Sbjct: 84 LFPDTAALVQARFGLKAFAYDLLAGCPGWIYALAQ--AHALVEAGLAQKVLAVGAEALSK 141
Query: 190 VLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224
++D+++ + L FGDG GAA++G +
Sbjct: 142 IIDWNDRATAVL--------FGDGGGAAVVGKVRE 168
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 148 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 47.4 bits (112), Expect = 3e-07
Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 31/175 (17%)
Query: 208 AVFG-DGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLD 266
V G DG A I D + ++ + ++ +
Sbjct: 3 TVAGSDGEQADAIRQDIDWITFAQN-----------PSGPRPFVRLEGPA--VFRWAAFK 49
Query: 267 VPVAIGKYIGKCLSNAMSPIGISDWNSLFYVLHPGGDGLIDQVEKNLGLGKDKLWASRYV 326
+ AM G+ +V H + + + KNL L D + A
Sbjct: 50 MGDVG--------RRAMDAAGVRPDQIDVFVPHQANSRINELLVKNLQLRPDAVVA--ND 99
Query: 327 LREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQ 381
+ GN AAS+ + E+ A G D +L G G GL+ V++
Sbjct: 100 IEHTGNTSAASIPLAMAEL----LTTGAAKPG---DLALLIGYGAGLSYAAQVVR 147
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Score = 46.4 bits (109), Expect = 1e-06
Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 50/216 (23%)
Query: 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEI 71
I+ G+ P TN++ + + + I R I +R+ E
Sbjct: 3 TKIIGTGSYLPEQ------------VRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNET 50
Query: 72 LKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVD 131
+ +AI+ G +I ++ +
Sbjct: 51 VSTMGFEAAT-------------------------RAIEMAGIEKDQIGLIVVATTSATH 85
Query: 132 -MPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDI-- 188
P A ++ +LG+K + + + A ++ LVV SD+
Sbjct: 86 AFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSV--ADQYVKSGAVKYALVVGSDVLA 143
Query: 189 RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224
R D + + FGDGAGAA++ A +
Sbjct: 144 RTCDPTDRGTIII--------FGDGAGAAVLAASEE 171
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Length = 181 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 38/223 (17%), Positives = 71/223 (31%), Gaps = 48/223 (21%)
Query: 4 VKSNQRPAATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKR 63
++ +R + +L VG+ P +N E T + + I R I R
Sbjct: 2 LRVPERRFSRVLGVGSYRPRR------------EVSNKEVCTWIDSTEEWIETRTGIRSR 49
Query: 64 YFHLTEEILKENPNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLI 123
+E ++ +A++ G ++I ++
Sbjct: 50 RIAEPDETIQVMGVAAS-------------------------RRALEHAGVDPAEIDLVV 84
Query: 124 FSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLV 183
S + + + + C + +A D E+ VLV
Sbjct: 85 VSTMTNFVHTPPLSVAIAHELGADNAGGFDL-SAACAGFCHALSIAADAVESGGSRHVLV 143
Query: 184 VCSDI--RVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224
V ++ V+D + S + L FGDGAGAA++G
Sbjct: 144 VATERMTDVIDLADRSLSFL--------FGDGAGAAVVGPSDV 178
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 390 | |||
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 100.0 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 100.0 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 100.0 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 100.0 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 100.0 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 100.0 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 100.0 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 99.97 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 99.97 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 99.97 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 99.97 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 99.96 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 99.93 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.93 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.93 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.92 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 99.09 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.05 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 99.03 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.02 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 98.98 | |
| d1xpma2 | 221 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.89 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.88 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 98.87 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.7 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.51 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 98.35 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 98.27 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 98.1 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.44 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 97.37 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 96.65 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.53 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 96.38 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.15 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 95.67 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 95.54 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 95.06 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 94.56 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 94.26 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 94.16 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 92.99 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 92.21 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 90.87 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 89.06 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 88.21 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 87.52 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 85.42 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 83.84 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 80.42 |
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-61 Score=472.34 Aligned_cols=358 Identities=23% Similarity=0.375 Sum_probs=302.1
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
.+|.|+|+|+|+++|+|+|+.+.+.+.... +..+++..+|++++||++||++.+... ..+++.....|++.+|+.
T Consensus 12 a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~---~~~~~~~~ri~~~tGI~~R~~~~~~~~--~~~~~~~~~~~~~~~r~~ 86 (372)
T d1teda_ 12 AVIEGLATGTPRRVVNQSDAADRVAELFLD---PGQRERIPRVYQKSRITTRRMAVDPLD--AKFDVFRREPATIRDRMH 86 (372)
T ss_dssp EEEEEEEEECCSCEEEHHHHHHHHHTC-------CCTTHHHHHHHTSCCSEEECSSCTTS--TTHHHHTTCSSCHHHHHH
T ss_pred EEEEEEEEeCCCeEEcHHHHHHHHHhhcCC---hHHHHHHHHHHHccCCcccceeccccc--cchhhhhhcCCCHHHHHH
Confidence 789999999999999999999988543211 112345678999999999999875421 111122334588999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLAK 170 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A~ 170 (390)
.|.+++.+|+++|+++||+++|++++|||+||++|++++..|+++++|+++||+++++. ++++ ++||+|++.||++|.
T Consensus 87 ~~~e~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~v~~~LGl~~~~~-~~~~~~~gC~g~~~aL~~A~ 165 (372)
T d1teda_ 87 LFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSIS-RVVVNFMGCAAAMNALGTAT 165 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSCCCSSCHHHHHHHHHTCCTTCE-EEEEESCGGGHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCchHHHHHHhhhccCCcee-EeeccccCccHHHHHHHHHH
Confidence 99999999999999999999999999999999999888889999999999999998764 5556 469999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCccccceeEEEeeeeeecCCCCCce
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNHERTLFQVLSCTQTTIPDTENYI 250 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 250 (390)
.++++++.++||||++|.+|..+...+ +..+..+.++|||||+|+||++++.........+.+.+..+...|.+.+.+
T Consensus 166 ~~l~sg~~~~~LVV~~E~~s~~~~~~d--~~~~~~~~~lfGDGAaA~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (372)
T d1teda_ 166 NYVRAHPAMKALVVCIELCSVNAVFAD--DINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGI 243 (372)
T ss_dssp HHHHHSTTCEEEEEEEEECGGGCCCCS--SHHHHHHHHHBCEEEEEEEEEEECTTSCCCTTCEEEEEEEEEECTTCTTSE
T ss_pred HHHhcCCCccceeeeehhhcccccCCC--cchhhhhhhhhcccceeEEeccCCcccccCCceeEEecccccccCCCcccc
Confidence 999999999999999999987554322 345667889999999999999877622222223445555556678888878
Q ss_pred eeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhh
Q 036844 251 TGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLRE 329 (390)
Q Consensus 251 ~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~ 329 (390)
.+..++.++.++.+++++..+.+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||++.+|+..+++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~i~Hq~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~ 322 (372)
T d1teda_ 244 VLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQI-SDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLAR 322 (372)
T ss_dssp EEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHHTTCCG-GGCSCEEECCSCHHHHHHHHHHHTCCGGGGHHHHHHHHH
T ss_pred ccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHhcCCCH-HHhhhhhccCccHHHHHHHHHHcCCCHHHhhhhHHHHhc
Confidence 8888888888888999999999999999999999999996 999 99999999999999999999999999988889999
Q ss_pred cCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 330 YGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 330 ~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
||||+|||+|++|++++++ |++.+|. |++++++||+|++|+++||++..
T Consensus 323 ~GN~~sasip~~L~~~l~~----g~~~~g~--d~vll~~fG~G~s~~~~ll~~~~ 371 (372)
T d1teda_ 323 FGNMLSVSLIFVLETMVQQ----AESAKAI--STGVAFAFGPGVTVEGMLFDIIR 371 (372)
T ss_dssp HCBCTHHHHHHHHHHHHHS----CSSSSSS--EEEEEEEEETTTEEEEEEEEECC
T ss_pred cCCcHHHHHHHHHHHHHHh----CCCCCCC--CEEEEEEEcHHHhHHHHhheeec
Confidence 9999999999999999998 7776552 89999999999999999999863
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=100.00 E-value=2.1e-40 Score=300.47 Aligned_cols=227 Identities=66% Similarity=1.074 Sum_probs=196.4
Q ss_pred Ccc---cccCCCC--CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhC
Q 036844 1 MTT---VKSNQRP--AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKEN 75 (390)
Q Consensus 1 ~~~---~~~~~~~--~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~ 75 (390)
|.| ++..||+ +++|.|+|+|+|+++++|+++.+.+.++...+....+.++..++++++||++||++.++++....
T Consensus 1 ~~~~~~~~~~~r~~~pa~I~giGt~~P~~~v~n~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~~~~~~~~~~~ 80 (235)
T d1bi5a1 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKEN 80 (235)
T ss_dssp CCCHHHHHHHHSCCSCCEEEEEEEECCSCEEESTTHHHHHHHHTTCTTCHHHHHHHHHHHHHSCCCEEECSCCHHHHHTC
T ss_pred CCCHHHHhhccCCCCCcEEEEEEEECCCcEEeHHHHHHHHHHhhccccchhhhhhhhhhhcccCCceeEEecChHhhccC
Confidence 555 5778888 69999999999999999999999987776655555667778999999999999999998876655
Q ss_pred CCccCCCCCChHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee
Q 036844 76 PNMCCYNAPSLDARQAMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY 155 (390)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i 155 (390)
+....+..|.+++|++.+.+...+|+.+|+++||+++|++++|||+||++|++++..|+.+..++++||+.....+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~p~~~a~~~~~l~~~~~~~~~~~~ 160 (235)
T d1bi5a1 81 PNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160 (235)
T ss_dssp HHHHSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCSSCHHHHHHHHHTCCTTCEEEEEE
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCccCccHHHHHHHHhcCCCceEEeee
Confidence 65666778999999999999999999999999999999999999999999999977788888999999887665546677
Q ss_pred ccccchHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCCCCcc
Q 036844 156 NQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPDISNH 228 (390)
Q Consensus 156 ~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~~~~~ 228 (390)
++||+|+++||++|..++++|+.++||||++|.+|..+..+++.+.++.+..++|||||+|+||+.+|. +++
T Consensus 161 ~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~~S~~~~~~d~~~~~~~v~~~lFGDGA~A~vl~~~p~-~~~ 232 (235)
T d1bi5a1 161 QQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPV-PEI 232 (235)
T ss_dssp SCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGGGTCCCCCTTCHHHHHHHHHBCCEEEEEEEESSCC-TTT
T ss_pred cCccchHHHHHHHHHHHHHcCCCCeEEEEEeeecceecCCCCCCchhhhcceeeeccceEEEEEecCCC-CCC
Confidence 999999999999999999999999999999999998665334434556677889999999999998876 443
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.7e-37 Score=272.72 Aligned_cols=198 Identities=20% Similarity=0.325 Sum_probs=172.0
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
.+|.++++|+|+++++|+|+.+.+....... +. .++..++++++||++||++.|.|+. ...|++.+|++
T Consensus 1 a~i~~~a~~~P~~~v~n~e~~e~~~~~~~~~--~~-~~~~~~i~~~tGI~~R~~~~~~e~~--------~~~~~~~~~~~ 69 (200)
T d1u0ma1 1 ATLCRPSVSVPEHVITMEETLELARRRHTDH--PQ-LPLALRLIENTGVRTRHIVQPIEDT--------LEHPGFEDRNK 69 (200)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTC--TT-HHHHHHHHHHTCCCEEEESSCHHHH--------TSCCCHHHHHH
T ss_pred CeeccceEECCCeeEcHHHHHHHHHHhCCCc--hh-HHHHHHHHHhCCCCeeeEECChhhh--------ccCCCHHHHHH
Confidence 3689999999999999999999875543221 22 3456789999999999999998863 23578999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee-ccccchHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY-NQGCYMGGTVIRLAK 170 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i-~~~C~~~~~al~~A~ 170 (390)
.+.+.+.+|+++|+++||+++|++++|||+||+++++++..|+++..|+++||+++... .+++ ++||+|++.+|++|.
T Consensus 70 ~~~~~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~-~~~i~~~gC~g~~~al~~A~ 148 (200)
T d1u0ma1 70 VYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTR-QIPIAQLGCAAGGAAINRAH 148 (200)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCE-EEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhhheEEEeccCCCCcchhHHHHHHHHhcCCCee-EeccccchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999998889999999999999998764 6676 689999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccC
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAG 222 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~ 222 (390)
.++++|+.++||||++|.+|..+ ++.|.+.++..+.++|||||+|+||+.+
T Consensus 149 ~~l~~~~~~~vLvv~~e~~S~~~-~~~d~~~~~~~~~~lFgDGAaA~ll~~~ 199 (200)
T d1u0ma1 149 DFCTAYPEANALIVACEFCSLCY-QPTDLGVGSLLCNGLFGDGIAAAVVRGR 199 (200)
T ss_dssp HHHHHSTTCEEEEEEEEEGGGGC-CTTCCSHHHHHHHHHBCEEEEEEEEETT
T ss_pred HHHHhCCCCEEEEEEEecccccc-CCCCCChhhhhcccccccccEEEEEecC
Confidence 99999999999999999999755 4666556666778899999999999875
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.2e-36 Score=260.20 Aligned_cols=168 Identities=25% Similarity=0.336 Sum_probs=150.8
Q ss_pred eEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHH
Q 036844 12 ATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQA 91 (390)
Q Consensus 12 ~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (390)
.+|.|+|+|+|+++++|+|+.+.+ ..+ .+|+.+++||++||+..+++.
T Consensus 3 a~I~g~g~ylP~~~v~n~el~~~~---~~~---------~~~i~~~~Gi~~r~~~~~~~~-------------------- 50 (174)
T d1hnja1 3 TKIIGTGSYLPEQVRTNADLEKMV---DTS---------DEWIVTRTGIRERHIAAPNET-------------------- 50 (174)
T ss_dssp EEEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHHCCCEEEECCTTCC--------------------
T ss_pred cEEEEEEEECCCCcccHHHHHHHh---CCC---------HHHHHhccCcceeeecCCCcc--------------------
Confidence 589999999999999999998754 211 378999999999999877663
Q ss_pred HHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 92 MLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 92 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
..+|+.+|+++||++++++++|||+||++|+++ +..|+++.+||++||+++.. +++++++|+|++.||++|.
T Consensus 51 -----~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~~~~--~~di~~~C~g~~~al~~A~ 123 (174)
T d1hnja1 51 -----VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCP--AFDVAAACAGFTYALSVAD 123 (174)
T ss_dssp -----HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCCSSC--EEEECCGGGHHHHHHHHHH
T ss_pred -----chHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCCchh--hhhhhhhhccHHHHHHHHH
Confidence 899999999999999999999999999999999 88999999999999998754 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 171 DIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
.++++|..++||||++|.+|. +.++.| +.+.++|||||+|+||++++.
T Consensus 124 ~~i~sg~~~~~Lvv~~e~~S~-~~~~~d-----~~~~~lfGDgA~A~vl~~~~~ 171 (174)
T d1hnja1 124 QYVKSGAVKYALVVGSDVLAR-TCDPTD-----RGTIIIFGDGAGAAVLAASEE 171 (174)
T ss_dssp HHHHTTSCSEEEEEEEECHHH-HSCTTC-----HHHHTTBCCEEEEEEEEEESS
T ss_pred HHHhcCCcceeEEEeeehhhc-ccCCCC-----CCeEEEeceeeEEEEEEeCCC
Confidence 999999999999999999996 445543 456789999999999999776
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=100.00 E-value=1.4e-35 Score=258.48 Aligned_cols=169 Identities=22% Similarity=0.299 Sum_probs=151.0
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
..+|.|+|+|+|+++++|+|+.+.+ ..+ .+|+.+++||++||++.++|+
T Consensus 9 ~arI~g~g~ylP~~~v~n~e~~~~~---~~~---------~~~i~~~tGi~~R~~~~~~e~------------------- 57 (181)
T d1mzja1 9 FSRVLGVGSYRPRREVSNKEVCTWI---DST---------EEWIETRTGIRSRRIAEPDET------------------- 57 (181)
T ss_dssp EEEEEEEEEECCSCEEEHHHHTTTS---SCC---------HHHHHHHHCCSEEECCCTTCC-------------------
T ss_pred ccEEEEEEEECCCceecHHHHHHHc---CCC---------HHHHHhccCcceehhhccCCc-------------------
Confidence 4899999999999999999998754 211 378899999999999987773
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+++|+++||+++|++++|||+||++|+++ +..|+.+..||++||.++.. ++|++++|+|++.||++|
T Consensus 58 ------~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~~~~--~~Dv~~~C~g~~~aL~~A 129 (181)
T d1mzja1 58 ------IQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGADNAG--GFDLSAACAGFCHALSIA 129 (181)
T ss_dssp ------HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCTTCE--EEEEECGGGHHHHHHHHH
T ss_pred ------HHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCCCcc--ceeHHhhhccHHHHHHHH
Confidence 899999999999999999999999999999999 88999999999999988765 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
..+++++..++||||++|.+|. +.++.| +.+.++|||||+|+||++++.
T Consensus 130 ~~~i~~~~~~~~LvV~~e~~s~-~~~~~d-----~~~~~lfGDGAaA~ll~~~~~ 178 (181)
T d1mzja1 130 ADAVESGGSRHVLVVATERMTD-VIDLAD-----RSLSFLFGDGAGAAVVGPSDV 178 (181)
T ss_dssp HHHHHHSSCSCEEEEEEEEGGG-GSCSSC-----TTTTTTBCEEEEEEEEEEESS
T ss_pred hCHhhcCCCceeEEeeeccccc-cCCCCC-----cceEEEeeeeeEEEEEEeCCC
Confidence 9999999999999999999996 445543 335789999999999998765
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.6e-35 Score=254.62 Aligned_cols=166 Identities=21% Similarity=0.290 Sum_probs=148.5
Q ss_pred EEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHHHH
Q 036844 13 TILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQAM 92 (390)
Q Consensus 13 ~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (390)
+|.|+|+|+|+++++|+++.+.+ ..+ .++|.+++||++||++.++++
T Consensus 2 gI~~ig~ylP~~~v~n~~~~~~~---~~~---------~~~i~~~~Gi~~R~~~~~~e~--------------------- 48 (172)
T d1ub7a1 2 GILALGAYVPERVMTNADFEAYL---DTS---------DEWIVTRTGIKERRVAAEDEY--------------------- 48 (172)
T ss_dssp EEEEEEEECCSEEEEHHHHHTTS---SCC---------HHHHHHHTCCCEEEECCTTCC---------------------
T ss_pred ceeEEEEECCCceEcHHHHHHHh---CCC---------HHHHHhccCceeeeecccccc---------------------
Confidence 79999999999999999998753 111 378899999999999988773
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKD 171 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ 171 (390)
..+|+.+|+++||+++|++|+|||+||++|+++ +..|+.+.+|+++||.+ .. +||++++|+|++.||++|..
T Consensus 49 ----~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~~-~~--~~di~~~C~g~~~al~~a~~ 121 (172)
T d1ub7a1 49 ----TSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGLK-AF--AYDLLAGCPGWIYALAQAHA 121 (172)
T ss_dssp ----HHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTCC-CE--EEEEECSTTHHHHHHHHHHH
T ss_pred ----ccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhccC-cc--ceeehhccccHHHHHHHHhh
Confidence 899999999999999999999999999999999 88999999999999954 44 89999999999999999999
Q ss_pred HHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 172 IAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 172 ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
+++++..++||||++|.+|. +.++++ +.+..+|||||+|+||++++.
T Consensus 122 ~~~~~~~~~~Lvv~~e~~S~-~~~~~d-----~~~~~lfGDgAaA~ll~~~~~ 168 (172)
T d1ub7a1 122 LVEAGLAQKVLAVGAEALSK-IIDWND-----RATAVLFGDGGGAAVVGKVRE 168 (172)
T ss_dssp HHHTTSCSEEEEEEEECGGG-TSCTTC-----HHHHTTBCCEEEEEEEECCCT
T ss_pred hhhcCCcceeEEeccccccc-ccCCCC-----cCeEEEecceeEEEEEEEcCC
Confidence 99999999999999999996 445543 446789999999999999876
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=99.97 E-value=2.2e-32 Score=235.10 Aligned_cols=165 Identities=21% Similarity=0.269 Sum_probs=144.3
Q ss_pred CeEEEEeeecCCCCccccCcHHHHHHHhcCCCchhHHHHHHHHHhhcCCccccccccchhhhhhCCCccCCCCCChHHHH
Q 036844 11 AATILAVGTATPPNCFYQADYPDFYFRATNSEHKTELKEKFKRICERQPINKRYFHLTEEILKENPNMCCYNAPSLDARQ 90 (390)
Q Consensus 11 ~~~I~~ig~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~GI~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~ 90 (390)
.|+|.++|.|+|+++++|+|+++.. .. + .+|+.+++||++||++.++|+
T Consensus 1 ~VgI~~~~~ylP~~~v~~~e~~~~~---g~-~--------~~~i~~~~Gi~~r~~~~~~E~------------------- 49 (166)
T d1xpma1 1 AIGIDKINFYVPKYYVDMAKLAEAR---QV-D--------PNKFLIGIGQTEMAVSPVNQD------------------- 49 (166)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHHHT---TS-C--------HHHHHTTTCCSEEEECCTTCC-------------------
T ss_pred CeeEeEEEEECCCeEEcHHHHHHHh---CC-C--------HHHHHHhcCcEEEEeCCCccC-------------------
Confidence 3799999999999999999998764 11 1 368899999999999988773
Q ss_pred HHHHhhHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHH
Q 036844 91 AMLIDEVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLA 169 (390)
Q Consensus 91 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A 169 (390)
+.+|+++|++++|++. .+++||+||++++++ +..|+++..++++||++.... +|+++++|+|+++||++|
T Consensus 50 ------~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~-~~dv~~~C~g~~~al~~A 120 (166)
T d1xpma1 50 ------IVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFAR-CFEMKEACYAATPAIQLA 120 (166)
T ss_dssp ------HHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCE-EEEEESTTTTHHHHHHHH
T ss_pred ------HHHHHHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceE-EeeecccHHHHHHHHHHH
Confidence 8999999999999887 478999999999999 889999999999999987654 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCccchhhhhhhhhhccCcEEEEeccCCC
Q 036844 170 KDIAENNPGARVLVVCSDIRVLDFHEPSETHLDVLVVQAVFGDGAGAAIIGAGPD 224 (390)
Q Consensus 170 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~lfGDgAaA~vl~~~~~ 224 (390)
.+++++++.+++|||++|..+..+. .. ...+|||||+|+||+++|.
T Consensus 121 ~~~i~~~~~~~alvV~sd~~~~~~~-~~--------~~~~fGDGA~A~ll~~~P~ 166 (166)
T d1xpma1 121 KDYLATRPNEKVLVIATDTARYGLN-SG--------GEPTQGAGAVAMVIAHNPS 166 (166)
T ss_dssp HHHHTTCTTCEEEEEEEEEECCCTT-CS--------SGGGCEEEEEEEEEEESCS
T ss_pred hhHHhcCCCCeEEEEEEceEeccCC-CC--------CCccCCCeeEEEEEecCCC
Confidence 9999999999999999998875332 11 1367999999999999873
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=99.97 E-value=7.2e-30 Score=216.13 Aligned_cols=156 Identities=54% Similarity=0.881 Sum_probs=142.5
Q ss_pred ccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHH
Q 036844 229 ERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLID 307 (390)
Q Consensus 229 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~ 307 (390)
+.|.|++++..+.++|++++.+.|++.+.|+.++++++||.++.+.++++++++|+++|++. +|| +|++||+|++|++
T Consensus 3 E~Plfei~~~~~~~iP~s~~~~~~~v~~~G~~~~l~r~Vp~~~~~~v~~~v~~~l~~~gl~~-~di~~~v~Hqgg~~Ild 81 (160)
T d1ee0a2 3 ERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITD-WNSVFWMVHPGGRAILD 81 (160)
T ss_dssp CCCCEEEEEEEEEECTTCGGGEEEEEETTEECCEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSSHHHHH
T ss_pred ccchhhhcccCCeEECCCccccCeeecCCceEEeeCchhHHHHHHHHHHHHHHHHhhccCCc-cccceEeecCCcHHHHH
Confidence 34679999999999999999999999999999999999999999999999999999999996 999 9999999999999
Q ss_pred HHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 308 QVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 308 ~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
.++++||++.+++..+|+++++||||+|||+|++|++++++...++..+.|.+.|+++++|||+|++|++++||..+.
T Consensus 82 ~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~~~~~~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~~ 159 (160)
T d1ee0a2 82 QVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRV 159 (160)
T ss_dssp HHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTBTTBSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHhhhhhcCCCCcCCCcCEEEEEEEChHHHHHHHHHeeccC
Confidence 999999999999999999999999999999999999999864444555555445889999999999999999998764
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=99.97 E-value=7.7e-30 Score=214.76 Aligned_cols=151 Identities=52% Similarity=0.828 Sum_probs=139.9
Q ss_pred eEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHH
Q 036844 233 FQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEK 311 (390)
Q Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~ 311 (390)
|++++..+.++|++++.|.|++++.|+.+++++++|.++.+.++++++++|+++|++. +|+ +|++||+|++|++.+++
T Consensus 2 fei~~~~~~~iP~t~~~m~~~v~d~G~~~~l~r~Vp~~i~~~i~~~~~~~l~~~gl~~-~di~~~v~Hqgg~~Ild~v~~ 80 (154)
T d1bi5a2 2 FEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISD-YNSIFWIAHPGGPAILDQVEQ 80 (154)
T ss_dssp EEEEEEEEEECTTCTTSEECCEETTEECCEECSCHHHHHHHHHHHHHHHHHGGGTCCC-TTSSEEEECCSSHHHHHHHHH
T ss_pred EEEEeCCCeEeCCCcccccccccCCcEEeecccchHHHHHHHHHHHHHHHHHHcCCCc-cccceEeeccccHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999996 999 99999999999999999
Q ss_pred HcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 312 NLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 312 ~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+|+++++++..+|+++++||||+|||+|++|++++++..++|..+.|.+.|++++++||+|++|++++||+.+
T Consensus 81 ~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~~~~~~~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~~ 153 (154)
T d1bi5a2 81 KLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153 (154)
T ss_dssp HHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHHhhhccCCcccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence 9999999999999999999999999999999999887444455666655589999999999999999999864
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=99.97 E-value=2.1e-29 Score=212.82 Aligned_cols=153 Identities=47% Similarity=0.785 Sum_probs=140.5
Q ss_pred eeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH
Q 036844 232 LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE 310 (390)
Q Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~ 310 (390)
.|+++...+.++|++++.+.|++.+.|+.+++++++|.++.+.++++++++|++++++. +|+ +|++||+|.+|++.++
T Consensus 2 ~feiv~~~~~~iP~t~~~~~~~~~~~G~~~~l~~~Vp~~v~~~i~~~~~~~l~~~~~~~-~did~~i~Hqgg~~Ild~v~ 80 (156)
T d1u0ua2 2 CFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISD-WNKLFWVVHPGGRAILDRVE 80 (156)
T ss_dssp CEEEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHGGGTCCC-GGGSEEEECCSCHHHHHHHH
T ss_pred eEEEEeCCCeEeCCCccccceeeecCcEEEEEcchhHHHHHHHHHHHHHHHHHHcCCCh-hhCceEeecCCcHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999996 999 9999999999999999
Q ss_pred HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 311 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
+.||++++++..+|+++.+||||+||++|++|+++.++..++++.+.|.+.|+++++|||+|++|+++|||..+.
T Consensus 81 ~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~~~~~~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~~ 155 (156)
T d1u0ua2 81 AKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPI 155 (156)
T ss_dssp HHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHHTCSBSBTTBSEEEEEEEETTTEEEEEEEEECBC
T ss_pred HHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHHhhhhccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCcc
Confidence 999999999999999999999999999999999998764444555555445999999999999999999998763
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.96 E-value=8.8e-29 Score=207.57 Aligned_cols=144 Identities=27% Similarity=0.401 Sum_probs=135.5
Q ss_pred eeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH
Q 036844 232 LFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE 310 (390)
Q Consensus 232 ~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~ 310 (390)
.+++...++.++|++++.+.|.+++.|+.+.+.+.++..+ +.+.+.++++|+++|++. +|| +|++||+|+++++.++
T Consensus 3 ~~~l~~~~~~~~P~t~~~~~~~~~~~g~~~~l~~~~p~~i-~~~~~~i~~~l~~~g~~~-~did~~~~Hq~~~~i~~~i~ 80 (148)
T d1u0ma2 3 GVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM-EPLAPALKELAGEHGWDA-SDLDFYIVHAGGPRILDDLS 80 (148)
T ss_dssp EEEEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGH-HHHHHHHHHHHHTTSCCS-SCCSCCEEECSHHHHHHHHH
T ss_pred ceEEEecCCEEccCChhhcceEeecCeEEEEEecccchHH-HHHHHHHHHHHHHhCCCH-HHCCEEEECCCCHHHHHHHH
Confidence 5788888888999999999999999999999999998755 668899999999999996 999 9999999999999999
Q ss_pred HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 311 KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 311 ~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
+.||++++++..+++++++|||++|||+|++|++++++ |++++| |+|+++|||+|++|+++++||..
T Consensus 81 ~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~~~~~~----~~~~~G---d~ill~gfG~G~s~~~~llrW~~ 147 (148)
T d1u0ma2 81 TFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDE----GGVEEG---ARGLLAGFGPGITAEMSLGCWQT 147 (148)
T ss_dssp HHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHHHS----CCCCSS---CCCEEEEEETTTEEEEEEEEEEC
T ss_pred HHhCCChhhhhHHHHHHHhcCCCCcchHHHHHHHHHHc----CCCCCC---CEEEEEEEchHhEeeEEEEEEcc
Confidence 99999999999888899999999999999999999998 899999 99999999999999999999975
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.93 E-value=1.6e-26 Score=194.81 Aligned_cols=113 Identities=20% Similarity=0.215 Sum_probs=106.4
Q ss_pred eCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHH
Q 036844 263 LSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFI 341 (390)
Q Consensus 263 ~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~ 341 (390)
.|++||+++++.++++++++|+++|++. +|| +|++||+|+++++.+++.||+|.+++... ++++||||+|||+|++
T Consensus 38 ~G~~v~~~av~~vp~~i~~~L~~~gl~~-~dId~~i~Hq~~~~~~~~v~~~lgi~~ek~~~~--~~~~~GNt~Sasip~~ 114 (153)
T d1mzja2 38 DGKRVFRWAVADVVPAAREALEVAGLTV-GDLVAFVPHQANLRIIDVLVDRLGVPEHVVVSR--DAEDTGNTSSASVALA 114 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCCG-GGCSEEEECCSCHHHHHHHHHHHTCCTTSEECC--THHHHCBCTTHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCc-ccCCEEEEcCCcHHHHHHHHHHhCCCchhcchh--hhhhcCCcccchHHHH
Confidence 3789999999999999999999999996 999 99999999999999999999999997643 4899999999999999
Q ss_pred HHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 342 LDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 342 L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
|++++++ +++++| |+|++++||+|++|++++|+|.++
T Consensus 115 L~~~~~~----~~~~~G---d~ill~~fG~G~s~~~~~l~~~~~ 151 (153)
T d1mzja2 115 LDRLVRS----GAVPGG---GPALMIGFGAGLSYAGQALLLPDP 151 (153)
T ss_dssp HHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCCC
T ss_pred HHHHHHc----CCCCCC---CEEEEEEEchhhhhhEEEEEecCC
Confidence 9999998 899999 999999999999999999999754
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=4.9e-26 Score=191.16 Aligned_cols=113 Identities=23% Similarity=0.305 Sum_probs=107.3
Q ss_pred EEeCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHH
Q 036844 261 GHLSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVF 339 (390)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~ 339 (390)
++.|+++|+++.+.++++|+++|+++|+++ +|| +|++||+|.++++.++++|+++++++..+ +++||||++||+|
T Consensus 35 ~M~G~~vf~~a~~~vp~~i~~~L~~~g~~~-~dId~~i~Hqa~~~~~~~i~~~lgi~~~k~~~~---~~~~Gn~~sasip 110 (149)
T d1ub7a2 35 YMNGREVFKFAVRVMNTATLEAIEKAGLTP-EDIRLFVPHQANLRIIDAARERLGLPWERVAVN---VDRYGNTSTASIP 110 (149)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSCHHHHHHHHHTTTCCGGGBCCC---HHHHCBCGGGHHH
T ss_pred EEccHHHHHHHHHHHHHHHHHHHHhhcccc-ccccEEEeeccchHHHHHHHhhccchhhHHHHH---HHHhcCCcchhHH
Confidence 344789999999999999999999999997 999 99999999999999999999999999875 9999999999999
Q ss_pred HHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeec
Q 036844 340 FILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFP 384 (390)
Q Consensus 340 l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~ 384 (390)
++|++++++ +++++| |+||+++||+|++|++++|||.+
T Consensus 111 ~~L~~~~~~----~~~~~G---d~vll~g~G~G~s~ga~llrw~g 148 (149)
T d1ub7a2 111 LALKEAVDA----GRIREG---DHVLLVSFGAGLTWAAAVLTWGG 148 (149)
T ss_dssp HHHHHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEECCC
T ss_pred HHHHHHHHc----CCCCCC---CEEEEEEEchHhhhEEEEEEECC
Confidence 999999998 899999 99999999999999999999954
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=4e-26 Score=190.27 Aligned_cols=109 Identities=22% Similarity=0.296 Sum_probs=105.1
Q ss_pred eCCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHH
Q 036844 263 LSLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFI 341 (390)
Q Consensus 263 ~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~ 341 (390)
.|+++|+++++.++++++++|+++|+++ +|| +|++||+|+++++.+++.||++++|+..+ +++||||+|||+|++
T Consensus 34 ~G~~vf~~av~~~~~~i~~~L~~~g~~~-~dId~~i~Hq~~~~~~~~~~~~l~l~~~k~~~~---~~~~GN~~sasip~~ 109 (143)
T d1hnja2 34 AGNEVFKVAVTELAHIVDETLAANNLDR-SQLDWLVPHQANLRIISATAKKLGMSMDNVVVT---LDRHGNTSAASVPCA 109 (143)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTCCG-GGCCEEEECCSCHHHHHHHHHHTTCCGGGBCCC---HHHHCBCGGGHHHHH
T ss_pred EChHHhhhhhhhhhHHHHHHHHHhhhcc-cccceEEeccCchHHHHHHHHhCccchhhhhhh---hhhhcccccchHHHH
Confidence 3789999999999999999999999996 999 99999999999999999999999999875 999999999999999
Q ss_pred HHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 342 LDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 342 L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
|++++++ |++++| |+|++++||+|++|+++++||
T Consensus 110 L~~~~~~----~~~~~G---d~vll~g~G~G~s~g~~llrw 143 (143)
T d1hnja2 110 LDEAVRD----GRIKPG---QLVLLEAFGGGFTWGSALVRF 143 (143)
T ss_dssp HHHHHHT----TCSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHHh----CCCCCC---CEEEEEEEehhhhhEEEEEEC
Confidence 9999998 899999 999999999999999999998
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=5.8e-26 Score=190.24 Aligned_cols=109 Identities=26% Similarity=0.352 Sum_probs=104.4
Q ss_pred CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHH
Q 036844 264 SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFIL 342 (390)
Q Consensus 264 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L 342 (390)
|+++|+++.+.++++++++|+++|+++ +|| +|++||+|+++++.++++||+|++|+..+ ++++||||+|||+|++|
T Consensus 39 G~~Vf~~a~~~v~~~i~~~L~~~gl~~-~dId~~i~Hqa~~~i~~~v~~~lgl~~ek~~~~--~~~~~GNt~sasip~~L 115 (148)
T d1u6ea2 39 GPAVFRWAAFKMGDVGRRAMDAAGVRP-DQIDVFVPHQANSRINELLVKNLQLRPDAVVAN--DIEHTGNTSAASIPLAM 115 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCCEEEECCSCHHHHHHHHHHHTCCTTCEECC--THHHHCBCGGGHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHcCCCc-ccccEEEeccccHHHHHHHHHhcCCCchhhhhh--hHHhhCCCccchHHHHH
Confidence 789999999999999999999999996 999 99999999999999999999999998764 59999999999999999
Q ss_pred HHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEe
Q 036844 343 DEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 343 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
++++++ |++++| |++++++||+|++|+++++|+
T Consensus 116 ~~a~~~----g~i~~G---d~vll~gfG~G~s~~a~llrv 148 (148)
T d1u6ea2 116 AELLTT----GAAKPG---DLALLIGYGAGLSYAAQVVRM 148 (148)
T ss_dssp HHHHHH----TSSCTT---CEEEEEEEETTTEEEEEEEEC
T ss_pred HHHHHc----CCCCCC---CEEEEEEEchhhhheEEEEeC
Confidence 999998 999999 999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=99.09 E-value=4.1e-10 Score=101.04 Aligned_cols=124 Identities=16% Similarity=0.148 Sum_probs=94.2
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C--------------------------CCCcHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V--------------------------DMPGADVRLVK 141 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~--------------------------~~p~~a~~v~~ 141 (390)
..+....|+..|+.+||+++|+++++++ .|+++++.+ . .....+.+|+.
T Consensus 67 ~~d~~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~ 146 (249)
T d1j3na1 67 RLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAM 146 (249)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHh
Confidence 3456788999999999999999877654 566665432 1 11246679999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----c-----cC-----------CCCccc
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL-----D-----FH-----------EPSETH 200 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~-----~-----~~-----------~~~~~~ 200 (390)
.+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|.... . .. .|.|.
T Consensus 147 ~~gl~Gp---~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~- 222 (249)
T d1j3na1 147 RYGFTGP---SSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTL- 222 (249)
T ss_dssp HHTCCSC---BCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBT-
T ss_pred hcCCCCC---ccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccC-
Confidence 9999874 6789999999999999999999999999999999997431 0 00 12221
Q ss_pred hhhhhhhhhhccCcEEEEeccCC
Q 036844 201 LDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 201 ~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
...+++.|+||+++||++.+
T Consensus 223 ---~~dG~v~gEGa~~lvLe~~~ 242 (249)
T d1j3na1 223 ---SRDGFVMGEGAGVLVLEAYE 242 (249)
T ss_dssp ---TCCCBCBBCEEEEEEEEEHH
T ss_pred ---CCCCEeeEeEEEEEEEccHH
Confidence 12378999999999998754
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.05 E-value=5e-10 Score=101.76 Aligned_cols=95 Identities=13% Similarity=-0.002 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
++.+|+..|++.+|+++|+++++||.||++++.+ ......+..+.-..|++..+. ++.+++.|++++.||..|...|
T Consensus 23 ~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp-~~tVn~~CaSg~~Ai~~a~~~I 101 (273)
T d1ulqa1 23 RPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVA-GCTVNRLCGSGLEAVAQAARAI 101 (273)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccc-eEEEecccchHHHHHHHHHHHH
Confidence 3899999999999999999999999999998876 345678888888889987654 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
++|..+.+|+++.|.+|.
T Consensus 102 ~~G~~d~~lagG~EsmS~ 119 (273)
T d1ulqa1 102 WAGEGKVYIGSGVESMSR 119 (273)
T ss_dssp HTTSCSEEEEEEEEESSS
T ss_pred hcCCCccceeeeccccch
Confidence 999999999999999995
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=99.03 E-value=2.1e-09 Score=96.33 Aligned_cols=124 Identities=16% Similarity=0.161 Sum_probs=92.9
Q ss_pred HHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-cHHHHHHH
Q 036844 93 LIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLVK 141 (390)
Q Consensus 93 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~v~~ 141 (390)
..+....|+..|+++||+++|++.++.+ .|+++++.. . ..+ ..+.+|+.
T Consensus 68 ~~d~~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 147 (250)
T d2gfva1 68 KMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTI 147 (250)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHH
Confidence 3445688999999999999999877654 355555431 1 022 25678999
Q ss_pred HcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccC-----------CCCccc
Q 036844 142 LLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFH-----------EPSETH 200 (390)
Q Consensus 142 ~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~-----------~~~~~~ 200 (390)
.+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|.... ... .|.|.+
T Consensus 148 ~~gl~Gp---~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~ 224 (250)
T d2gfva1 148 MYGLRGP---SISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKE 224 (250)
T ss_dssp HTTCCSC---EECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTT
T ss_pred HhCCCCC---ccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCC
Confidence 9999875 6789999999999999999999999999999999996421 011 122221
Q ss_pred hhhhhhhhhhccCcEEEEeccCC
Q 036844 201 LDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 201 ~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
..++++|+||+++||++.+
T Consensus 225 ----rdG~v~gEGaa~lVLE~~~ 243 (250)
T d2gfva1 225 ----RDGFVLGDGAGMLVLEEYE 243 (250)
T ss_dssp ----CCSBCBBCEEEEEEEEEHH
T ss_pred ----CCCEeeeeEEEEEEECcHH
Confidence 2478999999999998643
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.02 E-value=8.2e-10 Score=99.92 Aligned_cols=95 Identities=9% Similarity=0.069 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
++.+|+..+++.+|+++|+++++||.|++++..+ ...+..+..+.-..|++..+. ++.++..|+|++.|+.+|.+.|.
T Consensus 26 ~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vp-a~tv~~~C~Sg~~Ai~~Aa~~I~ 104 (268)
T d1m3ka1 26 PAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT-AWGMNQLAGSGLRAVALGMQQIA 104 (268)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE-EEEEECGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCccccc-ceeecccCcccchHHHHHHHHHh
Confidence 3899999999999999999999999999999887 556788899999999997664 89999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 036844 175 NNPGARVLVVCSDIRVL 191 (390)
Q Consensus 175 ~g~~~~vLvv~~d~~s~ 191 (390)
+|..+.+|+++.|.+|.
T Consensus 105 ~G~~dvvlagG~EsmS~ 121 (268)
T d1m3ka1 105 TGDASIIVAGGMESMSM 121 (268)
T ss_dssp TTSCSCEEEEEEEESTT
T ss_pred CCCceEEeecccccccc
Confidence 99999999999999985
|
| >d1xpma2 c.95.1.2 (A:168-388) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.89 E-value=5e-09 Score=91.38 Aligned_cols=114 Identities=15% Similarity=0.035 Sum_probs=88.7
Q ss_pred CCcchHHHHHhHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhH---------HHHHhhcCCC
Q 036844 264 SLDVPVAIGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWAS---------RYVLREYGNV 333 (390)
Q Consensus 264 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~---------~~~~~~~Gn~ 333 (390)
|+.......+.+..+++.+.++.|.+. +|+ ++++|++..+|.+...+.|....++.... ...-++.||+
T Consensus 31 G~~S~~~Yl~~l~~~~~~~~~~~g~~~-~dfd~~~fH~P~~km~~ka~~~l~~~~~~~~~~~~~~~~~~s~~~~~~iGN~ 109 (221)
T d1xpma2 31 GALSKDAYIRSFQQSWNEYAKRQGKSL-ADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNI 109 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCG-GGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCC
T ss_pred CcchHHHHHHHHHHHHHHHHHHcCCCh-hhhheEEeecCchhhHHHHHHHHHhccchhhHHHHHHhhhhHHHHHHhcCCc
Confidence 343345667888889999999999995 999 99999999999888877765432221111 0012368999
Q ss_pred ccchHHHHHHHHHHhhhhhccccCCCCCceEEEEEEcccccceeeeeEeecC
Q 036844 334 GAASVFFILDEVRKKSFEERKATTGEGLDCGVLFGCGPGLTVETVVLQSFPI 385 (390)
Q Consensus 334 ~sas~~l~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~~~ga~ll~~~~~ 385 (390)
++||+++.|..+++. +.+.+| ++|+++|+|+|......-+++.+.
T Consensus 110 YTaSlyl~L~Sll~~----~~~~~G---~rIglfSYGSG~~ae~fs~~V~~~ 154 (221)
T d1xpma2 110 YTGSLYLSLISLLEN----RDLQAG---ETIGLFSYGSGSVGEFYSATLVEG 154 (221)
T ss_dssp GGGHHHHHHHHHHHH----SCCCTT---CEEEEEEEETTTEEEEEEEEECTT
T ss_pred chHHHHHHHHhhhcc----ccCCCC---CEEEEEEecCCcceeEEEEEEccc
Confidence 999999999999987 678889 999999999999888888887653
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.88 E-value=3.2e-09 Score=95.60 Aligned_cols=94 Identities=6% Similarity=-0.021 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHH-cCCCCCCcCEEEEEecCC--CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKE-WGQSVSKITHLIFSAFYG--VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIA 173 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~-ag~~~~~Id~li~~s~~~--~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll 173 (390)
+.+|+..+++++|++ +|+++++||.||++...+ ...+..+..+.-..|++.... ++.++..|++++.|+..|...|
T Consensus 30 ~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~p~~vp-~~tV~~~C~Sgl~Ai~~aa~~I 108 (262)
T d1wdkc1 30 AEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSA-AQTVSRLCGSSMSALHTAAQAI 108 (262)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSSCTTSE-EEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhcccccc-hhhccccccHHHHHHHHHHHHH
Confidence 889999999999996 899999999999999876 456788888888889987764 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 036844 174 ENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 174 ~~g~~~~vLvv~~d~~s~ 191 (390)
.+|..+.+|+++.|.+|.
T Consensus 109 ~sG~~dvvlAgGvEsmS~ 126 (262)
T d1wdkc1 109 MTGNGDVFVVGGVEHMGH 126 (262)
T ss_dssp HTTSCSEEEEEEEEETTT
T ss_pred HhhcCCceeeeccccccc
Confidence 999999999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=98.87 E-value=1.1e-08 Score=91.27 Aligned_cols=129 Identities=16% Similarity=0.142 Sum_probs=94.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-----------------C--------CC-cHH
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-----------------D--------MP-GAD 136 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-----------------~--------~p-~~a 136 (390)
.+.....+....|+..++.+||+++|++++.+. .++++++.. . . .+ ..+
T Consensus 63 ~~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 142 (250)
T d1e5ma1 63 RKEAKRMDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMAS 142 (250)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHH
T ss_pred hhhhhhcCcHHHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhh
Confidence 334444556788999999999999999876542 455555421 0 1 11 257
Q ss_pred HHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc---------ccCC-----------
Q 036844 137 VRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR-VL---------DFHE----------- 195 (390)
Q Consensus 137 ~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~-s~---------~~~~----------- 195 (390)
.+++..+|+... ++.+..+|++++.||.+|..+|++|..+.+|+.++|.. +. ....
T Consensus 143 ~~is~~~gl~Gp---~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~r 219 (250)
T d1e5ma1 143 GLTAINLGAKGP---NNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASR 219 (250)
T ss_dssp HHHHHHHTCCSC---EECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCC
T ss_pred hhHHHhccCCCC---CccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccC
Confidence 788999999975 67899999999999999999999999999999999974 21 1111
Q ss_pred CCccchhhhhhhhhhccCcEEEEeccCC
Q 036844 196 PSETHLDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 196 ~~~~~~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
|.|. ...+++.|+||+++||++.+
T Consensus 220 PFD~----~~dG~~~gEGa~~~vLe~l~ 243 (250)
T d1e5ma1 220 PFDK----DRDGFVMGEGSGILILEELE 243 (250)
T ss_dssp TTBT----TCCSBCBBCEEEEEEEEEHH
T ss_pred CCCC----CCCCEeeEeeEEEEEEeeHH
Confidence 2221 12478999999999998743
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.70 E-value=1.8e-08 Score=90.90 Aligned_cols=95 Identities=11% Similarity=-0.010 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHc----CCCCCCcCEEEEEecCC-CCCCcHHHHHHHHcCCCCccccceeeccccchHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEW----GQSVSKITHLIFSAFYG-VDMPGADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAK 170 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~a----g~~~~~Id~li~~s~~~-~~~p~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~ 170 (390)
++.+|+..+++.+|+++ +++|++||.||+++..+ -.....+..+.-..|++.... ++.++..|++++.||..|+
T Consensus 34 ~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~~al~aglp~~vp-a~tVnr~CaSg~~Ai~~Aa 112 (269)
T d1afwa1 34 NTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRAACLASGIPYSTP-FVALNRQCSSGLTAVNDIA 112 (269)
T ss_dssp CHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTSC-EEEEECGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchhhhhhcccccccc-chhccccchHHHHHHHHHH
Confidence 38899999999999865 69999999999998776 333466778888889987664 8999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeecccc
Q 036844 171 DIAENNPGARVLVVCSDIRVL 191 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~~d~~s~ 191 (390)
..|.+|..+.+|+++.|.+|.
T Consensus 113 ~~I~~G~~divlagG~EsmS~ 133 (269)
T d1afwa1 113 NKIKVGQIDIGLALGVESMTN 133 (269)
T ss_dssp HHHHTTSCSEEEEEEEEEHHH
T ss_pred HHHhhccccceeeeecccccc
Confidence 999999999999999999984
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.51 E-value=1.5e-07 Score=81.70 Aligned_cols=99 Identities=13% Similarity=0.174 Sum_probs=77.9
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C---------------------------C----
Q 036844 88 ARQAMLIDEVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V---------------------------D---- 131 (390)
Q Consensus 88 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~---------------------------~---- 131 (390)
.+.....+....|+..|+++||+++|+++++++ .++++++.. . .
T Consensus 62 ~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (216)
T d1tqya1 62 PRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYL 141 (216)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHH
T ss_pred hhhhcccCcchhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhccccccccc
Confidence 344455567789999999999999999987654 244443321 0 1
Q ss_pred CC-cHHHHHHHHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc
Q 036844 132 MP-GADVRLVKLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR 189 (390)
Q Consensus 132 ~p-~~a~~v~~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~ 189 (390)
.| ..+.+++..+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|..
T Consensus 142 ~~~~~a~~ia~~~g~~Gp---~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~ 197 (216)
T d1tqya1 142 VPSVMPAEVAWAVGAEGP---VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP 197 (216)
T ss_dssp STTHHHHHHHHHHTCCSC---EEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred CchHHHHHHHHhcCcccc---ceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence 12 246889999999875 68899999999999999999999999999999999975
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=1.3e-06 Score=77.45 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=87.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCCCC------CcCEEEEEecCC-C---------------------------CCCcHHHHHH
Q 036844 95 DEVPKLGKEAALKAIKEWGQSVS------KITHLIFSAFYG-V---------------------------DMPGADVRLV 140 (390)
Q Consensus 95 ~~~~~la~~Aa~~aL~~ag~~~~------~Id~li~~s~~~-~---------------------------~~p~~a~~v~ 140 (390)
+....+...++.+++.++++..+ .+ .++.+++.. . ..-..+.+|.
T Consensus 69 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~-g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 147 (253)
T d2vbaa1 69 SDASIYAFLSMEQAIADAGLSPEAYQNNPRV-GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLA 147 (253)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCHHHHTTCTTE-EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHhhccchhccCCCCE-EEEeccccccccccccccccccccCCccccCchhhhccccccccceec
Confidence 44667888899999999987643 23 344444321 0 0113567888
Q ss_pred HHcCCCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccC-----------CCCcc
Q 036844 141 KLLGLKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFH-----------EPSET 199 (390)
Q Consensus 141 ~~lgl~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~-----------~~~~~ 199 (390)
..+|+... .+.+..+|++++.||..|.++|++|..+.+||.++|.... .+. .|.|.
T Consensus 148 ~~~g~~Gp---~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~~~~~~~~~~~ls~~~~~~P~~~~rPFD~ 224 (253)
T d2vbaa1 148 TPFKIHGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDA 224 (253)
T ss_dssp TTTTCCSC---EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHHHHHTTCBCCSCTTSGGGSCCTTBT
T ss_pred cccCcccc---eeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcchhhhHHHHHHHhcCCCCCCCCCCCCCCC
Confidence 89999874 6788999999999999999999999999999999997531 010 12221
Q ss_pred chhhhhhhhhhccCcEEEEeccCC
Q 036844 200 HLDVLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 200 ~~~~~~~~~lfGDgAaA~vl~~~~ 223 (390)
...+++.|+||+++||++-+
T Consensus 225 ----~~~G~v~gEGa~~lvLe~le 244 (253)
T d2vbaa1 225 ----HRDGFVIAGGGGMVVVEELE 244 (253)
T ss_dssp ----TCCSBCBBCEEEEEEEEEHH
T ss_pred ----CCCCEeeeeEEEEEEEccHH
Confidence 12478999999999998743
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.27 E-value=5.1e-06 Score=71.31 Aligned_cols=90 Identities=12% Similarity=-0.003 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcC----EEEEEecCC-C-------------------------CCC-cHHHHHHHHcC
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKIT----HLIFSAFYG-V-------------------------DMP-GADVRLVKLLG 144 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~-~-------------------------~~p-~~a~~v~~~lg 144 (390)
....|+..|+.+||+++|+++++++ .++++++.+ . ..+ ..+.+|+..+|
T Consensus 69 ~~~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 148 (208)
T d1tqyb1 69 PSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHG 148 (208)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHT
T ss_pred cccccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccc
Confidence 3577999999999999999888764 455565421 0 122 24678999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecc
Q 036844 145 LKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIR 189 (390)
Q Consensus 145 l~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~ 189 (390)
+... .+.+..+|++++.||..|.++|++| .+.+|+.++|..
T Consensus 149 l~Gp---~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~ 189 (208)
T d1tqyb1 149 MRGP---SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSA 189 (208)
T ss_dssp CCSS---CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECC
T ss_pred ccce---eeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccc
Confidence 9875 6789999999999999999999999 899999999863
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=98.10 E-value=3.8e-06 Score=74.85 Aligned_cols=120 Identities=13% Similarity=0.061 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC-----cCEEEEEecCC----------------------C----CCC-cHHHHHHHHcC
Q 036844 97 VPKLGKEAALKAIKEWGQSVSK-----ITHLIFSAFYG----------------------V----DMP-GADVRLVKLLG 144 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~-----Id~li~~s~~~----------------------~----~~p-~~a~~v~~~lg 144 (390)
...++..|..+++.+++....+ ...+....... + ..+ ..+.+|+..+|
T Consensus 88 ~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 167 (270)
T d2ix4a1 88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG 167 (270)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccchhHHHHHHHhC
Confidence 4577788888999888765433 12333332211 0 111 36789999999
Q ss_pred CCCccccceeeccccchHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccC------------CCCccchh
Q 036844 145 LKPSVNRLMIYNQGCYMGGTVIRLAKDIAENNPGARVLVVCSDIRVL----------DFH------------EPSETHLD 202 (390)
Q Consensus 145 l~~~~~~~~~i~~~C~~~~~al~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~------------~~~~~~~~ 202 (390)
+... .+.+..+|++++.||..|..+|++|.++.+||.++|.... ... .|.|.
T Consensus 168 l~Gp---~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~rPFD~--- 241 (270)
T d2ix4a1 168 FQGP---NHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDC--- 241 (270)
T ss_dssp CCSC---EECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCCTTBT---
T ss_pred CCCC---CcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccCCCCC---
Confidence 9975 6789999999999999999999999999999999997531 010 12221
Q ss_pred hhhhhhhhccCcEEEEeccCC
Q 036844 203 VLVVQAVFGDGAGAAIIGAGP 223 (390)
Q Consensus 203 ~~~~~~lfGDgAaA~vl~~~~ 223 (390)
...+++.|+||+++||++.+
T Consensus 242 -~a~G~v~gEGaa~~vLe~l~ 261 (270)
T d2ix4a1 242 -DRDGFVIGEGSGVIVLEEYE 261 (270)
T ss_dssp -TCCSBCBBCEEEEEEEEEHH
T ss_pred -CCCCEeeEeeEEEEEEeeHH
Confidence 12478999999999998754
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.44 E-value=0.00013 Score=62.34 Aligned_cols=156 Identities=15% Similarity=0.123 Sum_probs=92.4
Q ss_pred hhhhhccCcEEEEeccCCCC-CccccceeEEEeeeeeecCCCCCceeeEeecceeEEEeCCcchHHHHHhHHHHHHHhhc
Q 036844 206 VQAVFGDGAGAAIIGAGPDI-SNHERTLFQVLSCTQTTIPDTENYITGQLKEMGIYGHLSLDVPVAIGKYIGKCLSNAMS 284 (390)
Q Consensus 206 ~~~lfGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 284 (390)
.+++.|+|++++||++...- ........++.+............ . .+. .....++++.+|+
T Consensus 15 dG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~----~---------~~~-----~~~~~~~~~~al~ 76 (205)
T d1tqya2 15 DGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTG----L---------KAD-----GREMAETIRVALD 76 (205)
T ss_dssp CCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSC----C---------CTT-----CHHHHHHHHHHHH
T ss_pred CCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCc----c---------ccc-----ccccchhhhhHHh
Confidence 48999999999999864320 000011234443322211111000 0 011 1234567888999
Q ss_pred cCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhccccCC
Q 036844 285 PIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERKATTG 358 (390)
Q Consensus 285 ~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~i~~G 358 (390)
++++++ +|| +|-.|..+...-+.+ .+.++-....++.+ .+-..+||+.+|+-++.|..++.. .++|.+.+-
T Consensus 77 ~a~i~~-~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~~~-l~~g~ipp~ 153 (205)
T d1tqya2 77 ESRTDA-TDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVS-SIKSMVGHSLGAIGSLEIAACVLA-LEHGVVPPT 153 (205)
T ss_dssp HHTCCG-GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEE-CTHHHHCBCTTTHHHHHHHHHHHH-HHHCEECCB
T ss_pred hhcCCc-cceeeeeccccccccCchhHHHHHHHhhccccCCceee-eecccccccccccchhHHHHHHHH-HhCCeEccc
Confidence 999997 999 999999988775543 44554322222222 145679999999988877766543 111332210
Q ss_pred ---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 359 ---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 359 ---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+.++++..+||-|.+.++++|+-
T Consensus 154 ~~~~~~~p~~~~~~v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~ 198 (205)
T d1tqya2 154 ANLRTSDPECDLDYVPLEARERKLRSVLTVGSGFGGFQSAMVLRD 198 (205)
T ss_dssp TTCCSBBTTBCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred CCCCCCCCCCCcccCCCCCcCCCCCEEEEeCCCCCceeEEEEEee
Confidence 002578899999998889999874
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.37 E-value=0.00042 Score=58.39 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=69.5
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
+.++|+++|+++++++ +|| ++-.|-.+....+.+ .+.++-. .+..+ .+-..+||+.+|+-++.|...+..
T Consensus 64 ~~~~i~~aL~~a~i~~-~di~~v~ahgtGt~~~D~~E~~al~~~f~~~--~~~v~-s~K~~~GH~~~AsG~~~li~~~~~ 139 (194)
T d1tqyb2 64 LERAIRLALNDAGTGP-EDVDVVFADGAGVPELDAAEARAIGRVFGRE--GVPVT-VPKTTTGRLYSGGGPLDVVTALMS 139 (194)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCCSHHHHHHHHHHHHHHHCTT--CSEEE-CGGGGTCBCGGGHHHHHHHHHHHH
T ss_pred hhhhhhhhcccccccc-cceeeeeccccCcccccHHHhhhhhhhhhcc--ccccc-cccccccccccccccceehhhhhh
Confidence 3467889999999997 999 999999888776654 3555532 22221 134679999999977776655542
Q ss_pred hhhhccccC-----------------C----CCCceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATT-----------------G----EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~-----------------G----~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
..+|.+.| . ...++++..+||.|.+-++++|+.
T Consensus 140 -l~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~ 193 (194)
T d1tqyb2 140 -LREGVIAPTAGVTSVPREYGIDLVLGEPRSTAPRTALVLARGRWGFNSAAVLRR 193 (194)
T ss_dssp -HHHTSBCCBCSCCCCCGGGCCEECBSSCBCCCCSEEEEEEEETTTEEEEEEEEE
T ss_pred -hhhceeccccCCCCCCcccCccccCCCCccCCCCEEEEECcCCCceeEEEEEee
Confidence 11133321 0 001578999999999999999874
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.65 E-value=0.0038 Score=49.83 Aligned_cols=85 Identities=15% Similarity=0.094 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccccee-e----ccccchHHHHHHHHH
Q 036844 96 EVPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMI-Y----NQGCYMGGTVIRLAK 170 (390)
Q Consensus 96 ~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~-i----~~~C~~~~~al~~A~ 170 (390)
.+.....++++++|+++|++++|||.+++.. ..+..-..++++||++.... ... + +.++++...+|..|.
T Consensus 45 ~a~~~v~~~i~~~L~~~gl~~~dId~~i~Hq----a~~~i~~~v~~~lgl~~ek~-~~~~~~~~GNt~sasip~~L~~a~ 119 (148)
T d1u6ea2 45 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQ----ANSRINELLVKNLQLRPDAV-VANDIEHTGNTSAASIPLAMAELL 119 (148)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECC----SCHHHHHHHHHHHTCCTTCE-ECCTHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEecc----ccHHHHHHHHHhcCCCchhh-hhhhHHhhCCCccchHHHHHHHHH
Confidence 3556668899999999999999999988633 33445678999999986532 221 1 223444455555444
Q ss_pred HHHHcCCCCeEEEEE
Q 036844 171 DIAENNPGARVLVVC 185 (390)
Q Consensus 171 ~ll~~g~~~~vLvv~ 185 (390)
.-=.-.+.+++|+++
T Consensus 120 ~~g~i~~Gd~vll~g 134 (148)
T d1u6ea2 120 TTGAAKPGDLALLIG 134 (148)
T ss_dssp HHTSSCTTCEEEEEE
T ss_pred HcCCCCCCCEEEEEE
Confidence 321122457888776
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.53 E-value=0.0041 Score=49.69 Aligned_cols=85 Identities=18% Similarity=0.056 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee--cc--ccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY--NQ--GCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i--~~--~C~~~~~al~~A~~l 172 (390)
+.....++++++|+++|++++|||.+|... ..+.....+.++||++.+.. ...+ .. +.++...+|..+..-
T Consensus 45 a~~~vp~~i~~~L~~~g~~~~dId~~i~Hq----a~~~~~~~i~~~lgi~~~k~-~~~~~~~Gn~~sasip~~L~~~~~~ 119 (149)
T d1ub7a2 45 AVRVMNTATLEAIEKAGLTPEDIRLFVPHQ----ANLRIIDAARERLGLPWERV-AVNVDRYGNTSTASIPLALKEAVDA 119 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEECC----SCHHHHHHHHHTTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccccccEEEeec----cchHHHHHHHhhccchhhHH-HHHHHHhcCCcchhHHHHHHHHHHc
Confidence 445567889999999999999999988633 34446678889999987652 2222 22 233333343333222
Q ss_pred HHcCCCCeEEEEEe
Q 036844 173 AENNPGARVLVVCS 186 (390)
Q Consensus 173 l~~g~~~~vLvv~~ 186 (390)
-.-.+.+++|+++.
T Consensus 120 ~~~~~Gd~vll~g~ 133 (149)
T d1ub7a2 120 GRIREGDHVLLVSF 133 (149)
T ss_dssp TSSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11235678888774
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.38 E-value=0.0079 Score=46.17 Aligned_cols=94 Identities=10% Similarity=0.130 Sum_probs=68.3
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHhhhhhcc
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKKSFEERK 354 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~~~~~g~ 354 (390)
..+++++|+++|++. +|| +|=.|-+-....-...+.|+++.+|+..+ --.=.+||-.+||-...+.+++.+
T Consensus 27 v~Ai~klL~r~gl~~-~Did~~EinEAFA~q~l~~~~~l~id~~kvN~~-GGaiAlGHP~GaSGarlv~~l~~~------ 98 (124)
T d1afwa2 27 AYAIPKVLEATGLQV-QDIDIFEINEAFAAQALYCIHKLGIDLNKVNPR-GGAIALGHPLGCTGARQVATILRE------ 98 (124)
T ss_dssp HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCGGGBSTT-CCHHHHCBCTTTHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHcCCCc-ccCcEEEeccchhHHHHHHHHHcCCChhhcccc-CccceecCCcCCchHHHHHHHHHH------
Confidence 457889999999996 999 99899888777778889999999998652 011248999999988888887776
Q ss_pred ccCCCCCceEEEEE-EcccccceeeeeE
Q 036844 355 ATTGEGLDCGVLFG-CGPGLTVETVVLQ 381 (390)
Q Consensus 355 i~~G~~~d~vll~~-~G~G~~~ga~ll~ 381 (390)
++.+ ++.+... .|.|.. .+++++
T Consensus 99 L~~~---~~glas~C~ggG~G-~a~~ie 122 (124)
T d1afwa2 99 LKKD---QIGVVSMCIGTGMG-AAAIFI 122 (124)
T ss_dssp SCTT---CEEEEEEEETTTEE-EEEEEE
T ss_pred hccC---CEEEEEEcccCCcE-EEEEEE
Confidence 5555 5544433 344443 445554
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.0093 Score=47.16 Aligned_cols=85 Identities=13% Similarity=-0.002 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceee----ccccchHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIY----NQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i----~~~C~~~~~al~~A~~l 172 (390)
+.....++++++|+++|++++|||.+++-. .-......++++||++.+.. ...+ +.++++...+|..+..-
T Consensus 42 av~~~~~~i~~~L~~~g~~~~dId~~i~Hq----~~~~~~~~~~~~l~l~~~k~-~~~~~~~GN~~sasip~~L~~~~~~ 116 (143)
T d1hnja2 42 AVTELAHIVDETLAANNLDRSQLDWLVPHQ----ANLRIISATAKKLGMSMDNV-VVTLDRHGNTSAASVPCALDEAVRD 116 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEECC----SCHHHHHHHHHHTTCCGGGB-CCCHHHHCBCGGGHHHHHHHHHHHT
T ss_pred hhhhhhHHHHHHHHHhhhcccccceEEecc----CchHHHHHHHHhCccchhhh-hhhhhhhcccccchHHHHHHHHHHh
Confidence 445567799999999999999999998532 22335578889999987642 2212 33445555565444332
Q ss_pred HHcCCCCeEEEEEe
Q 036844 173 AENNPGARVLVVCS 186 (390)
Q Consensus 173 l~~g~~~~vLvv~~ 186 (390)
=+-.+.+++|+++.
T Consensus 117 ~~~~~Gd~vll~g~ 130 (143)
T d1hnja2 117 GRIKPGQLVLLEAF 130 (143)
T ss_dssp TCSCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEE
Confidence 11234688888774
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=95.67 E-value=0.012 Score=47.53 Aligned_cols=106 Identities=15% Similarity=0.054 Sum_probs=71.4
Q ss_pred hHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHH-----HHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 274 YIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVE-----KNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 274 ~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~-----~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
...++++++|+++|+++ +|| ++-.|-.+...-|.++ +.++-....+..+ .+-..+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~i~~Al~~a~i~~-~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~-s~K~~~GH~~~AsG~~~l~~~l~ 104 (161)
T d1e5ma2 27 GATRAIAWALKDSGLKP-EMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVS-STKSMTGHLLGGSGGIEAVATVM 104 (161)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCh-hhcceEEEeccCCcccchHHhhhhhhccccCCCcceEE-ecccccccccccchhhHHHHhHH
Confidence 44678899999999997 999 9999998887766543 4454222222221 13567999999998888876665
Q ss_pred hhhhhccccCCC---------------------CCceEEEEEEcccccceeeeeEe
Q 036844 348 KSFEERKATTGE---------------------GLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 348 ~~~~~g~i~~G~---------------------~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
. .++|.+.+-. ..++++.-+||-|.+-++++|+.
T Consensus 105 ~-~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 105 A-IAEDKVPPTINLENPDPECDLDYVPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp H-HHHTEECCBTTCSSBCTTCCSCCCBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred h-cccCeeCCccCCCCCCCCCCcccCcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 3 1113332100 01467889999998888888874
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=95.54 E-value=0.023 Score=45.28 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccceeec-cc-cchHHHHHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRLMIYN-QG-CYMGGTVIRLAKDIAE 174 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~~~i~-~~-C~~~~~al~~A~~ll~ 174 (390)
+.....++++++|+++|++++|||.+++.. .-+.....++++||++........+. .| |++...-+. ...+++
T Consensus 46 av~~vp~~i~~~L~~~gl~~~dId~~i~Hq----~~~~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~-L~~~~~ 120 (153)
T d1mzja2 46 AVADVVPAAREALEVAGLTVGDLVAFVPHQ----ANLRIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALA-LDRLVR 120 (153)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCSEEEECC----SCHHHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccCCEEEEcC----CcHHHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHH-HHHHHH
Confidence 556667789999999999999999998633 33445678899999987642111221 23 333322222 233444
Q ss_pred cC---CCCeEEEEE
Q 036844 175 NN---PGARVLVVC 185 (390)
Q Consensus 175 ~g---~~~~vLvv~ 185 (390)
.+ +.+++|+++
T Consensus 121 ~~~~~~Gd~ill~~ 134 (153)
T d1mzja2 121 SGAVPGGGPALMIG 134 (153)
T ss_dssp HTSSCTTCEEEEEE
T ss_pred cCCCCCCCEEEEEE
Confidence 43 457888776
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=95.06 E-value=0.041 Score=41.97 Aligned_cols=70 Identities=17% Similarity=0.022 Sum_probs=51.9
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
..+++++|+++|++. +|+ +|=+|-+-....-...+.|+++.+|+..+= --=-+||-.+||-...+.+++.
T Consensus 25 v~A~~~lL~r~gl~~-~Did~~EinEAFA~q~la~~~~l~id~~kvN~~G-GaiAlGHP~GaSGarl~~tl~~ 95 (124)
T d1m3ka2 25 IPASRKALERAGWKI-GDLDLVEANEAFAAQACAVNKDLGWDPSIVNVNG-GAIAIGHPIGASGARILNTLLF 95 (124)
T ss_dssp HHHHHHHHHHHTCCG-GGCSEEEECCSBHHHHHHHHHHHCCCGGGBSTTC-CHHHHCCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCh-hcccHHHhcccchhheeeehHhhCCChhhcCCCC-CccccccCcCccchhHHHHHHH
Confidence 357789999999996 999 998898877766778899999999986520 0123799888875544444433
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=94.56 E-value=0.023 Score=45.56 Aligned_cols=106 Identities=11% Similarity=0.073 Sum_probs=70.7
Q ss_pred hHHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 274 YIGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 274 ~~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
....+++++|+++|+++ +|| ++-.|-.+...-|.+ .+.++-...++..+ .+-..+||+.+|+-.+.|...+.
T Consensus 27 ~~~~~~~~al~~agi~p-~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~K~~~GH~~~asG~~~li~~~~ 104 (159)
T d1j3na2 27 GAALAMARALKDAGIAP-EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVS-STKSMIGHLLGAAGAVEAIATVQ 104 (159)
T ss_dssp HHHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHhhccHhhcCCCH-HHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEe-cccccccccccccccchhhhhhh
Confidence 34567889999999997 999 999999888776554 33332111111111 13567999999998888766554
Q ss_pred hhhhhccccCC--------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 348 KSFEERKATTG--------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 348 ~~~~~g~i~~G--------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
. .+++.+.+= .+.+++++-+||-|.+-++++|+.
T Consensus 105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 105 A-LYHGVIPPTINLEDPDPELDLDFVPEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp H-HHHTEECCCTTTTSBCTTSCSBCCSSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred H-hhCCEeccccccccccceeeeeccCcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 3 111333210 012678899999999999999985
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=94.26 E-value=0.05 Score=43.56 Aligned_cols=105 Identities=13% Similarity=0.134 Sum_probs=70.2
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..++++++|+++++++ +|| |+-.|-.+..+-|.+ .+.++-....+..+ .+-..+||+-+|+-.+.|...+..
T Consensus 28 ~~~~~~~al~~a~i~p-~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~-s~Ks~~GH~~~AsG~~~li~~ll~ 105 (161)
T d2gfva2 28 AALAMANALRDAGIEA-SQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVS-STKSMTGHLLGAAGAVESIYSILA 105 (161)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhcccCc-ceEEEEEeecccCcccHHHHHHHHHHHhccccccceec-cccccccccHHHHHHHHHHHHHHH
Confidence 3467889999999997 999 999999888776643 44454222222221 135679999999988777766543
Q ss_pred hhhhccccC----------------------CCCCceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATT----------------------GEGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~----------------------G~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.++|.+.+ -.+.++.+.-+||-|.+-++++|+.
T Consensus 106 -l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 106 -LRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp -HHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred -hcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 11133321 0112567778999999989998874
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.16 E-value=0.061 Score=42.92 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=68.7
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..++++++|+++++++ +|| ++-.|-.+.+.-|. +.+.++-+ ++.+ .+-..+||+.+|+-.+.|...+..
T Consensus 28 ~~~~~~~al~~a~l~p-~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~~---~~v~-s~Ks~iGH~~~asG~~~l~~~l~~ 102 (158)
T d1ox0a2 28 AIKAIKLALEEAEISP-EQVAYVNAHGTSTPANEKGESGAIVAVLGKE---VPVS-STKSFTGHLLGAAGAVEAIVTIEA 102 (158)
T ss_dssp HHHHHHHHHHHHTCCG-GGCCCEECCCCSCHHHHHHHHHHHHHHHCSS---SEEE-CTHHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhccccccc-eeeeEEeeeccccccchhHHHHHHHHhcCCc---ccCc-Ccccccccchhhhhhhhhcccccc
Confidence 3568899999999997 999 99999988776554 44556622 2221 146779999999887776655543
Q ss_pred hhhhccccCC---------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATTG---------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~G---------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.++|.+.+- ...++++.-+||-|.+-++++||.
T Consensus 103 -l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 156 (158)
T d1ox0a2 103 -MRHNFVPMTAGTSEVSDYIEANVVYGQGLEKEIPYAISNTFGFGGHNAVLAFKR 156 (158)
T ss_dssp -HHHTEECCBSSCCSBCTTCCSEECBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred -cccceeccccCCCCCCcccCcccccCccccCCCCEEEEeCcCCCcEeEEEEEEe
Confidence 111322210 001567888999998888888874
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=92.99 E-value=0.23 Score=37.63 Aligned_cols=71 Identities=18% Similarity=0.086 Sum_probs=48.5
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHH--cCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKN--LGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~--lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..+++++|+++|++. +|+ .|=.|-+-....-...+. |+++.+|+..+ --.=-+||-.+||-...+-+++.+
T Consensus 24 ~~A~~~~L~r~gl~~-~Did~~EinEAFAaq~l~~~~~~~l~~d~~kvN~~-GGaIAlGHP~GASGari~~tl~~~ 97 (125)
T d1ulqa2 24 VPATRKALERAGLSF-SDLGLIELNEAFAAQALAVLREWSLSMEDQRLNPN-GGAIALGHPLGASGARILTTLVHE 97 (125)
T ss_dssp HHHHHHHHHHTTCCG-GGCSEEEECCSBHHHHHHHHHHHTCCTTCTTBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhHhhccCcCc-cccchheeccccchhHHHHHHHhhccCchhhcCCC-CCcccccCCccccchhHHHHHHHH
Confidence 357889999999996 999 888888765444444555 67788887652 011247999888766655555543
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=92.21 E-value=0.082 Score=41.65 Aligned_cols=80 Identities=21% Similarity=0.169 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc-ee-----eccccchHHHHHHHHHHH
Q 036844 99 KLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL-MI-----YNQGCYMGGTVIRLAKDI 172 (390)
Q Consensus 99 ~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~-~~-----i~~~C~~~~~al~~A~~l 172 (390)
.-...+++++|+++|++++|||.+++-. ..+..-..++++||+++...+. .. -+.+.++...+|+ .+
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq----~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L~---~~ 115 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHA----GGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALR---RL 115 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEEC----SHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECC----CCHHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHHH---HH
Confidence 3356788999999999999999877533 2233457888999998765211 11 1334455555554 34
Q ss_pred HHcC---CCCeEEEEE
Q 036844 173 AENN---PGARVLVVC 185 (390)
Q Consensus 173 l~~g---~~~~vLvv~ 185 (390)
++.+ +.+++|+++
T Consensus 116 ~~~~~~~~Gd~ill~g 131 (148)
T d1u0ma2 116 FDEGGVEEGARGLLAG 131 (148)
T ss_dssp HHSCCCCSSCCCEEEE
T ss_pred HHcCCCCCCCEEEEEE
Confidence 4443 245666665
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=90.87 E-value=0.49 Score=35.71 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccc------cceeeccccchHHHHHHHHHHHHH
Q 036844 101 GKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVN------RLMIYNQGCYMGGTVIRLAKDIAE 174 (390)
Q Consensus 101 a~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~------~~~~i~~~C~~~~~al~~A~~ll~ 174 (390)
-+.|++++|+++|++.+|||++=+.- .+.+.+-..+++||++.... -++..-.||+|.-..+.+++.|-+
T Consensus 24 Pv~A~~~lL~r~gl~~~Did~~EinE----AFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGarl~~tl~~~L~~ 99 (124)
T d1m3ka2 24 PIPASRKALERAGWKIGDLDLVEANE----AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKR 99 (124)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECC----SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCChhcccHHHhcc----cchhheeeehHhhCCChhhcCCCCCccccccCcCccchhHHHHHHHHHHh
Confidence 35789999999999999999875422 23334456788999876531 011222578888888899998877
Q ss_pred cCCCCeEEE
Q 036844 175 NNPGARVLV 183 (390)
Q Consensus 175 ~g~~~~vLv 183 (390)
.+ .++.|+
T Consensus 100 ~~-~~~Gla 107 (124)
T d1m3ka2 100 RG-ARKGLA 107 (124)
T ss_dssp HT-CSEEEE
T ss_pred cC-CCEEEE
Confidence 65 456554
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=89.06 E-value=0.35 Score=38.28 Aligned_cols=104 Identities=14% Similarity=0.038 Sum_probs=66.7
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHH-----HHHcCCCc--ccchhHHHHHhhcCCCccchHHHHHHHHHH
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQV-----EKNLGLGK--DKLWASRYVLREYGNVGAASVFFILDEVRK 347 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~-----~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~ 347 (390)
..+++++|+++++++ +|| |+-.|-.+...-|.+ .+.++-.. ..+..+ .+-..+||+-+|+-.+.|...+.
T Consensus 27 ~~~~~~al~~a~~~~-~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~-s~K~~~GH~~~AsG~~~li~~~l 104 (161)
T d2ix4a2 27 VLAMTRALRQSGLCP-NQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFS-STKGATGHLLGAAGAVEAIFSIL 104 (161)
T ss_dssp HHHHHHHHHHHTCCG-GGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEE-CTHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCc-cccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeee-ccccccCCccchHHHHHHHHHHH
Confidence 457889999999997 999 999999887776544 34444211 111111 13567899999998888765544
Q ss_pred hhhhhccccCC----------------------CCCceEEEEEEcccccceeeeeEe
Q 036844 348 KSFEERKATTG----------------------EGLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 348 ~~~~~g~i~~G----------------------~~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
. .+++.+.+- ...++++.-+||-|.+-++++|+.
T Consensus 105 ~-l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 105 A-IHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp H-HHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred H-HhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 2 011222210 001467777999998888888874
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.21 E-value=0.32 Score=44.02 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCcccc-ceee-----ccccchHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNR-LMIY-----NQGCYMGGTVIRLAK 170 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~-~~~i-----~~~C~~~~~al~~A~ 170 (390)
......++++++|+++|++++|||.+++-. ..+..-..++++||++....+ .+++ +.++++...+| .
T Consensus 264 ~~~~~~~~i~~~L~~~gl~~~did~~i~Hq----~~~~i~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L---~ 336 (372)
T d1teda_ 264 IFSGVAPVVTEMLWDNGLQISDIDLWAIHP----GGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVL---E 336 (372)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCSCEEECC----SCHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHhcCCCHHHhhhhhccC----ccHHHHHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHH---H
Confidence 456678889999999999999999987632 333455778899999876421 1221 23444545554 3
Q ss_pred HHHHcCC---C-CeEEEEE
Q 036844 171 DIAENNP---G-ARVLVVC 185 (390)
Q Consensus 171 ~ll~~g~---~-~~vLvv~ 185 (390)
.+++.+. . +++|+++
T Consensus 337 ~~l~~g~~~~g~d~vll~~ 355 (372)
T d1teda_ 337 TMVQQAESAKAISTGVAFA 355 (372)
T ss_dssp HHHHSCSSSSSSEEEEEEE
T ss_pred HHHHhCCCCCCCCEEEEEE
Confidence 4555543 2 4566554
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=87.52 E-value=0.6 Score=35.41 Aligned_cols=71 Identities=15% Similarity=0.020 Sum_probs=46.3
Q ss_pred HHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHHHHHHcCC---CcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 276 GKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQVEKNLGL---GKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 276 ~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~~~~~lgi---~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..+++++|+++|++. +|+ +|=.|-+-....-.+.+.+++ +.||+..+ ---=-+||-.+||-...+-+++.+
T Consensus 26 ~~A~~klL~ragl~~-~did~~EinEAFA~q~l~~~~~~~~~~~~~ekvN~~-GGaiAlGHP~GASGaRlv~~l~~~ 100 (128)
T d1wdkc2 26 VPATQKALKRAGLNM-ADIDFIELNEAFAAQALPVLKDLKVLDKMNEKVNLH-GGAIALGHPFGCSGARISGTLLNV 100 (128)
T ss_dssp HHHHHHHHHHHTCCG-GGCCEEEECCSBHHHHHHHHHHTTCGGGHHHHBSTT-CCHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcCccc-cccceEEeecccchhhhhhhhhcccccCCcceecCC-CCcccccccccccchhHHHHHHHH
Confidence 356789999999996 999 898888765555455566554 44555431 001237998888766555555543
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=85.42 E-value=1.3 Score=36.18 Aligned_cols=86 Identities=8% Similarity=0.110 Sum_probs=55.5
Q ss_pred HHHhHHHHHHHhhccCCCCCCCce-eEEEcCCC----HHHHHHHHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHH
Q 036844 271 IGKYIGKCLSNAMSPIGISDWNSL-FYVLHPGG----DGLIDQVEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEV 345 (390)
Q Consensus 271 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~h~~~----~~~~~~~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~ 345 (390)
..+...++++++|+++|+++ +|| ++|..... ....-.+.++||++.+-... ...|+++++.+..|..+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~-~dId~lI~~s~t~~~~P~~aa~v~~~lg~~~~~~~~------~i~~~gC~g~~~al~~A 147 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLA-TDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQI------PIAQLGCAAGGAAINRA 147 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCG-GGCSEEEEECSSSCCSSCHHHHHHHHTTCCTTCEEE------EECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCh-hhhheEEEeccCCCCcchhHHHHHHHHhcCCCeeEe------ccccchhhHHHHHHHHH
Confidence 45566788999999999997 999 76653322 23345678899998754332 23567777777777655
Q ss_pred HHhhhhhccccCCCCCceEEEEEEc
Q 036844 346 RKKSFEERKATTGEGLDCGVLFGCG 370 (390)
Q Consensus 346 ~~~~~~~g~i~~G~~~d~vll~~~G 370 (390)
..- ++.|. ..++|+++.-
T Consensus 148 ~~~------l~~~~-~~~vLvv~~e 165 (200)
T d1u0ma1 148 HDF------CTAYP-EANALIVACE 165 (200)
T ss_dssp HHH------HHHST-TCEEEEEEEE
T ss_pred HHH------HHhCC-CCEEEEEEEe
Confidence 432 22221 1678887764
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=83.84 E-value=5.1 Score=30.72 Aligned_cols=100 Identities=17% Similarity=0.091 Sum_probs=65.1
Q ss_pred HHHHHHHhhccCCCCCCCce-eEEEcCCCHHHHHH-----HHHHcCCCcccchhHHHHHhhcCCCccchHHHHHHHHHHh
Q 036844 275 IGKCLSNAMSPIGISDWNSL-FYVLHPGGDGLIDQ-----VEKNLGLGKDKLWASRYVLREYGNVGAASVFFILDEVRKK 348 (390)
Q Consensus 275 ~~~~i~~~L~~~gl~~~~di-~~i~h~~~~~~~~~-----~~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~l~L~~~~~~ 348 (390)
..++++++|+.+ + .+| ++-.|-.+..+-|. +.+.++-..-.+.. +-..+||+.+|+-.+.|...+..
T Consensus 24 ~~~~~~~al~~a---~-~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s---~K~~~GH~~~asG~~~l~~~~~~ 96 (151)
T d2vbaa2 24 AVRCMKMAMHGV---D-TPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISA---TKAMTGHSLGAAGVQEAIYSLLM 96 (151)
T ss_dssp HHHHHHHHHTTC---C-SCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEEC---THHHHCBCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcC---c-ccceeEEEeccCCccccHHHHHHHHHHhCCCCccccc---chhhccccccchhhhhhhHHHHH
Confidence 345677777654 4 678 99999988776654 45567632222322 35679999999888887766553
Q ss_pred hhhhccccCCC---------------------CCceEEEEEEcccccceeeeeEe
Q 036844 349 SFEERKATTGE---------------------GLDCGVLFGCGPGLTVETVVLQS 382 (390)
Q Consensus 349 ~~~~g~i~~G~---------------------~~d~vll~~~G~G~~~ga~ll~~ 382 (390)
.+++.+.|-. ..+.++..+||-|.+-++++||.
T Consensus 97 -l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~ 150 (151)
T d2vbaa2 97 -LEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGFGGTNATLVMRK 150 (151)
T ss_dssp -HHHTEECCCCCCSSBCTTCTTSEECCSCEECCCCEEEEEEEETTTEEEEEEEEC
T ss_pred -HHcCCcccccCccccccccccccccCcCcCCCCCEEEEeCCcccceeEEEEEEE
Confidence 1112222100 01467888999999999999985
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=80.42 E-value=4.7 Score=31.14 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcCEEEEEecCCCCCCcHHHHHHHHcCCCCccccc----e-e-eccccchHHHHHHHHH
Q 036844 97 VPKLGKEAALKAIKEWGQSVSKITHLIFSAFYGVDMPGADVRLVKLLGLKPSVNRL----M-I-YNQGCYMGGTVIRLAK 170 (390)
Q Consensus 97 ~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~p~~a~~v~~~lgl~~~~~~~----~-~-i~~~C~~~~~al~~A~ 170 (390)
..+-..++++++|+++|++.+|||..++-. .-+..-..++++||+++...+. + . -+..+++...+|+.+.
T Consensus 40 i~~~i~~~~~~~l~~~gl~~~di~~~v~Hq----gg~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~ 115 (154)
T d1bi5a2 40 VSKNITKALVEAFEPLGISDYNSIFWIAHP----GGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR 115 (154)
T ss_dssp HHHHHHHHHHHHHGGGTCCCTTSSEEEECC----SSHHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccccceEeecc----ccHHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHH
Confidence 344455778889999999999999877522 3344667899999998765321 1 1 2456667777775554
Q ss_pred H
Q 036844 171 D 171 (390)
Q Consensus 171 ~ 171 (390)
.
T Consensus 116 ~ 116 (154)
T d1bi5a2 116 K 116 (154)
T ss_dssp H
T ss_pred H
Confidence 3
|