Citrus Sinensis ID: 036868

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
MEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS
ccccccccEEEcccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHcccccccccEEccccccccccccccEEcccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccccccccccccccccccccEEEEEccccccEEEEcccccEEEcccccccEEEEcccEEEEEEcccccccccEEEEcccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHcccccccHHHHHHccc
ccccccccEEEcccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccccEEEEEccccHHHHHHHHccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccEEEEEccccccccccccccccccccccEEEEEccccccEEEEEEccccEEEccccccEEEEEEccHEEEEEcccEcEEEEEEEEEccccEEEEEEEEccccccEEcccHHHcccccccccccccHHHHHHHHHHccHHHHHHHHHHHccc
meerrriptidlgefPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLpleikrrntdviagsgyvaptqknplyealglydmasSQAVADFcshldasphqRETIEKYAQAIQELALDLAHKLAESMGlmdsvfqdwpcqfrinkynfapesvgspgvqlhtdsgfltilqddenvgglevmdrsgafvpvdplpgtllvnlGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFllgpkeaaveapaefvdaehprlyvpitfEDYRKLRLSTNLQAGEALELVRSHS
meerrriptidlgefpkqLKKLREaseewgcfrVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTdviagsgyvaptqkNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAveapaefvdaehprlyVPITFEDYRKLRLSTNlqagealelvrshs
MEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS
************************ASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQ************
***RRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEI***************PTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRS**
MEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEA********
****RRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRS**
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query299 2.2.26 [Sep-21-2011]
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.953 0.802 0.294 1e-28
Q06942364 Naringenin,2-oxoglutarate N/A no 0.923 0.758 0.307 2e-26
Q05964365 Naringenin,2-oxoglutarate N/A no 0.923 0.756 0.305 1e-25
O49561338 Gibberellin 2-beta-dioxyg no no 0.872 0.772 0.299 2e-25
Q05963356 Naringenin,2-oxoglutarate N/A no 0.903 0.758 0.300 3e-25
Q7XZQ7368 Flavanone 3-dioxygenase O N/A no 0.916 0.744 0.299 7e-25
Q9LSW6362 1-aminocyclopropane-1-car no no 0.866 0.715 0.278 9e-25
P41090364 Naringenin,2-oxoglutarate no no 0.923 0.758 0.304 2e-24
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.959 0.786 0.301 3e-24
Q9S818358 Naringenin,2-oxoglutarate no no 0.959 0.801 0.293 5e-24
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function desciption
 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 152/309 (49%), Gaps = 24/309 (7%)

Query: 7   IPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNT 66
           IP IDL   P     + +AS+ WG F++ NH +S  L+ +++ + + L D+P E K    
Sbjct: 49  IPVIDLSN-PDVTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAA 107

Query: 67  DVIAG-SGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDA-SPHQRE----TIEKYAQ 120
               G SGY  P + +P +E   ++    + A   + +H +   PH        I++Y  
Sbjct: 108 SSDKGVSGYGEP-RISPFFEK-KMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVD 165

Query: 121 AIQELALDLAHKLAESMGLMDSVFQDWPCQF------------RINKYNFAPESVGSPGV 168
            +++LA  L + +  S+G+     + W  +             R+N Y   PE   + G+
Sbjct: 166 EMEKLASRLLYCILGSLGVTVEDIE-WAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGL 224

Query: 169 QLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVK 228
             HTDS  LTIL    N GGL+V      +V V+P PG L+VN+GD+  + SNG++ +V 
Sbjct: 225 AAHTDSTILTILHQ-SNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVV 283

Query: 229 HRVQCKESAIRVSIATFLLGPKEAAVEAP-AEFVDAEHPRLYVPITFEDYRKLRLSTNLQ 287
           HR +   +  R+SIA    GP      AP ++      P LY  IT+++Y +++     +
Sbjct: 284 HRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIKYEVFDK 343

Query: 288 AGEALELVR 296
           A +A+ +V 
Sbjct: 344 AMDAIRVVN 352
Converts the inactive gibbberellin precursors GA9 and GA20 in the bioactives gibberellins GA4 and GA1.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 5
>sp|Q06942|FL3H_MALDO Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q05964|FL3H_DIACA Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ7|FL3H_PETCR Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1 Back     alignment and function description
>sp|Q9LSW6|ACH10_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 10 OS=Arabidopsis thaliana GN=At5g43450 PE=2 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
225431637298 PREDICTED: gibberellin 3-beta-dioxygenas 0.979 0.983 0.774 1e-137
147781479296 hypothetical protein VITISV_016474 [Viti 0.963 0.972 0.777 1e-136
255575269306 Gibberellin 3-beta-dioxygenase, putative 0.993 0.970 0.718 1e-129
3492806307 adventitious rooting related oxygenase [ 0.996 0.970 0.721 1e-125
82568691307 2-oxoacid-dependent dioxygenase [Prunus 0.973 0.947 0.725 1e-124
224056727297 2-oxoglutarate-dependent dioxygenase [Po 0.976 0.983 0.713 1e-123
224117676297 2-oxoglutarate-dependent dioxygenase [Po 0.966 0.973 0.710 1e-121
388500146300 unknown [Lotus japonicus] 0.969 0.966 0.679 1e-117
356496511299 PREDICTED: gibberellin 3-beta-dioxygenas 0.983 0.983 0.652 1e-116
357484317298 1-aminocyclopropane-1-carboxylate oxidas 0.983 0.986 0.661 1e-116
>gi|225431637|ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 227/293 (77%), Positives = 264/293 (90%)

Query: 7   IPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNT 66
           IP+ID+ +FP+Q ++LREA EEWGCFRVVNH +  +L++EMK VV  LLDLPLE+KRRNT
Sbjct: 6   IPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNT 65

Query: 67  DVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELA 126
           DVIAGSGY+AP++ NPLYEALGLYDMAS QAV  FCS LDASPHQRETI+ YA+A+QELA
Sbjct: 66  DVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQELA 125

Query: 127 LDLAHKLAESMGLMDSVFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENV 186
           +D+ +KLAE+MGL   +F++WPCQFRINKYNF PE+VGSPGVQ+HTDS FLTILQDDENV
Sbjct: 126 MDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQDDENV 185

Query: 187 GGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIATFL 246
           GGLEVMD+SGAFV VDP+PGTLLVNLGDIATVWSNGRL NVKHRVQCKE+A+R+SIA+FL
Sbjct: 186 GGLEVMDKSGAFVAVDPMPGTLLVNLGDIATVWSNGRLCNVKHRVQCKEAAVRLSIASFL 245

Query: 247 LGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS 299
           LGPK+AAVEAP E VD+EHPRL+VP+T+EDYRKLRLST LQAGEAL LVR  S
Sbjct: 246 LGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKLQAGEALALVRVDS 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147781479|emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255575269|ref|XP_002528538.1| Gibberellin 3-beta-dioxygenase, putative [Ricinus communis] gi|223532040|gb|EEF33850.1| Gibberellin 3-beta-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|3492806|emb|CAA12386.1| adventitious rooting related oxygenase [Malus x domestica] Back     alignment and taxonomy information
>gi|82568691|dbj|BAE48659.1| 2-oxoacid-dependent dioxygenase [Prunus mume] Back     alignment and taxonomy information
>gi|224056727|ref|XP_002298993.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222846251|gb|EEE83798.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224117676|ref|XP_002317640.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222860705|gb|EEE98252.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388500146|gb|AFK38139.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|356496511|ref|XP_003517110.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Glycine max] Back     alignment and taxonomy information
>gi|357484317|ref|XP_003612446.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] gi|355513781|gb|AES95404.1| 1-aminocyclopropane-1-carboxylate oxidase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query299
TAIR|locus:2035859308 AT1G14130 [Arabidopsis thalian 0.976 0.948 0.646 8.2e-99
TAIR|locus:2035848312 AT1G14120 [Arabidopsis thalian 0.966 0.926 0.614 2.7e-91
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.903 0.764 0.343 4.2e-31
TAIR|locus:2034195355 GA3OX4 "gibberellin 3-oxidase 0.946 0.797 0.294 2.1e-29
TAIR|locus:2121671324 AT4G23340 [Arabidopsis thalian 0.906 0.836 0.314 5e-28
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.966 0.793 0.280 1.3e-27
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.899 0.856 0.295 4.5e-27
TAIR|locus:2202980356 AT1G78550 [Arabidopsis thalian 0.959 0.806 0.277 5.7e-27
TAIR|locus:2082058363 JRG21 "jasmonate-regulated gen 0.909 0.749 0.303 5.7e-27
TAIR|locus:2127403338 GA2OX8 "gibberellin 2-oxidase 0.889 0.786 0.304 1.5e-26
TAIR|locus:2035859 AT1G14130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 981 (350.4 bits), Expect = 8.2e-99, P = 8.2e-99
 Identities = 192/297 (64%), Positives = 231/297 (77%)

Query:     7 IPTIDLGEFPKQL--KKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRR 64
             IPTIDL E   ++  +K+REASE WGCFRV+NH VS +LMAEMK+ V +L   P E+K R
Sbjct:     9 IPTIDLEEVSDKILNQKIREASERWGCFRVINHGVSLSLMAEMKKTVIDLFQRPYEVKVR 68

Query:    65 NTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQE 124
             NTDV+ GSGY AP + NP YEALGLYDMAS  AV  FC  L+AS  QRE + KYA+AI  
Sbjct:    69 NTDVLLGSGYRAPNEINPYYEALGLYDMASPHAVNTFCDQLEASADQREIMVKYAKAING 128

Query:   125 LALDLAHKLAESMGLMDS-VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDD 183
             LA DLA KLAES GL+++  F++WP QFRINKY+F PE+VG  GVQLHTDSGFLTILQDD
Sbjct:   129 LATDLARKLAESYGLVETDFFKEWPSQFRINKYHFKPETVGKLGVQLHTDSGFLTILQDD 188

Query:   184 ENVGGLEVMDRS-GAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSI 242
             ENVGGLE MD S G F P+DPLP TL +NLGD+AT+WSNGRL NVKHRVQCKE+ +R SI
Sbjct:   189 ENVGGLEAMDNSSGTFFPIDPLPNTLAINLGDMATIWSNGRLCNVKHRVQCKEATMRYSI 248

Query:   243 ATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS 299
             A+FLLGP +  +E P+EFVDAEHPRLY PI+ E  R +R++  L  GEAL+L+ +H+
Sbjct:   249 ASFLLGPMDTDLEPPSEFVDAEHPRLYKPISHEGVRNIRMTKKLHDGEALKLI-THA 304
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005634 "nucleus" evidence=IDA
TAIR|locus:2035848 AT1G14120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034195 GA3OX4 "gibberellin 3-oxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121671 AT4G23340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082058 JRG21 "jasmonate-regulated gene 21" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127403 GA2OX8 "gibberellin 2-oxidase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
2OGox14
SubName- Full=Putative uncharacterized protein; (297 aa)
(Populus trichocarpa)
Predicted Functional Partners:
FLS6
flavonol synthase (111 aa)
  •     0.451
grail3.19938000101
annotation not avaliable (120 aa)
  •     0.451

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 0.0
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-39
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-38
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-36
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-35
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 4e-35
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-33
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-33
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 9e-32
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-30
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 3e-29
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 7e-29
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 9e-27
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-26
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 6e-26
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 5e-25
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-24
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-22
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 1e-22
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-22
PLN02904357 PLN02904, PLN02904, oxidoreductase 6e-22
PLN02485329 PLN02485, PLN02485, oxidoreductase 9e-22
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-18
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-17
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-16
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 2e-15
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-10
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 4e-06
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
 Score =  540 bits (1392), Expect = 0.0
 Identities = 229/295 (77%), Positives = 255/295 (86%), Gaps = 2/295 (0%)

Query: 7   IPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNT 66
           IPTIDL EFP Q++KLREA E WGCFRVVNH VS +LMAEMK+VVR L DLP E+KRRNT
Sbjct: 6   IPTIDLEEFPGQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNT 65

Query: 67  DVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELA 126
           DVI GSGY+AP++ NPLYEALGLYDMAS QAV  FCS LDASPHQRETI+KYA+AI +LA
Sbjct: 66  DVILGSGYMAPSEVNPLYEALGLYDMASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLA 125

Query: 127 LDLAHKLAESMGLMDS-VFQDWPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDEN 185
           +DLA KLAES+GL++   FQ WP QFRINKYNF PE+VGS GVQ+HTDSGFLTILQDDEN
Sbjct: 126 MDLARKLAESLGLVEGDFFQGWPSQFRINKYNFTPETVGSSGVQIHTDSGFLTILQDDEN 185

Query: 186 VGGLEVMDR-SGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAIRVSIAT 244
           VGGLEVMD  SG FVPVDPLPGTLLVNLGD+AT WSNGRL NVKHRVQCKE+ +R+SIA+
Sbjct: 186 VGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATMRISIAS 245

Query: 245 FLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSHS 299
           FLLGPK+  VEAP EFVDAEHPRLY P T+EDYRKLRLST L AGEAL L+ + S
Sbjct: 246 FLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALITAKS 300

Length = 300
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 299
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02216357 protein SRG1 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN02485329 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02947374 oxidoreductase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.91
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.79
PLN03176120 flavanone-3-hydroxylase; Provisional 99.71
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 96.43
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.62
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.93
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 92.96
TIGR02466201 conserved hypothetical protein. This family consis 91.41
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 86.19
PRK15401213 alpha-ketoglutarate-dependent dioxygenase AlkB; Pr 85.0
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 82.48
PF07350416 DUF1479: Protein of unknown function (DUF1479); In 81.6
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
Probab=100.00  E-value=1.7e-76  Score=530.91  Aligned_cols=297  Identities=77%  Similarity=1.232  Sum_probs=268.0

Q ss_pred             CCCCCCCceEECCCchHHHHHHHHHhhhccEEEEecCCCCHHHHHHHHHHHHHhcCCCHHHhhhccCCCCCCCCCCCCCC
Q 036868            1 MEERRRIPTIDLGEFPKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDVIAGSGYVAPTQK   80 (299)
Q Consensus         1 M~~~~~iP~IDl~~l~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~Gy~~~~~~   80 (299)
                      |++. .||+|||+.+.+.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.....++||.+.+..
T Consensus         1 ~~~~-~iPvIDls~~~~~~~~l~~Ac~~~GfF~l~nHGi~~~l~~~~~~~~~~FF~LP~e~K~~~~~~~~~~GY~~~~~~   79 (300)
T PLN02365          1 MAEV-NIPTIDLEEFPGQIEKLREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFDLPDEVKRRNTDVILGSGYMAPSEV   79 (300)
T ss_pred             CCcC-CCCEEEChhhHHHHHHHHHHHHHCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhccCCCCCCCCCCcCCC
Confidence            8877 799999999866679999999999999999999999999999999999999999999997654456899988777


Q ss_pred             CCchhhcCcCCCCCchHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcccccCcCcceeeeeccCC
Q 036868           81 NPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGL-MDSVFQDWPCQFRINKYNFA  159 (299)
Q Consensus        81 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~l~~~ll~~la~~Lgl-~~~~f~~~~~~lr~~~Yp~~  159 (299)
                      .+.+|.+.+.+...+...+.|+.++..+|+||+.+++|+++|.+++..|+++||++||+ ++++|.+..+.+|++|||++
T Consensus        80 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~f~~~~~~lr~~~YP~~  159 (300)
T PLN02365         80 NPLYEALGLYDMASPQAVDTFCSQLDASPHQRETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGWPSQFRINKYNFT  159 (300)
T ss_pred             CCchhheecccccCchhhhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHhhcccceeeeecCCC
Confidence            78889988775444433445554445678999999999999999999999999999999 88899887889999999999


Q ss_pred             CCCCCCCcccccccCCceeEEecCCCCCeeeEEcC-CCCeEeccCCCCcEEEEcchHHHHHhCCCccCCCCceecCCCCc
Q 036868          160 PESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDR-SGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCKESAI  238 (299)
Q Consensus       160 ~~~~~~~~~~~HtD~~~lTll~~~~~~~GLqv~~~-~g~W~~v~~~~g~~vvn~Gd~l~~~T~G~~~s~~HRV~~~~~~~  238 (299)
                      +.++...|+++|||+|+||||+||++++||||+++ +|+|++|+|.+|++|||+||+||+||||+||||+|||+.++..+
T Consensus       160 p~~~~~~g~~~HtD~g~lTlL~qd~~~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HRVv~~~~~~  239 (300)
T PLN02365        160 PETVGSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKEATM  239 (300)
T ss_pred             CCccccccccCccCCCceEEEecCCCcCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccceeEcCCCCC
Confidence            88778899999999999999999734899999987 79999999999999999999999999999999999999887789


Q ss_pred             eEEEEEcccCCCCCeeeCCccccCCCCCCCCCCccHHHHHHHHHHccCCCChhhhhhhcC
Q 036868          239 RVSIATFLLGPKEAAVEAPAEFVDAEHPRLYVPITFEDYRKLRLSTNLQAGEALELVRSH  298 (299)
Q Consensus       239 R~S~~~F~~p~~d~~i~p~~~~~~~~~~~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  298 (299)
                      |||++||+.|+.|++|.|+++++++++|++|++++++||+..++++.+..+..++++...
T Consensus       240 R~Si~~F~~p~~d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  299 (300)
T PLN02365        240 RISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALALITAK  299 (300)
T ss_pred             EEEEEEEecCCCCCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHhhhhcc
Confidence            999999999999999999999999999999999999999999999998888888877543

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PRK15401 alpha-ketoglutarate-dependent dioxygenase AlkB; Provisional Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information
>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-18
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 2e-18
1w9y_A319 The Structure Of Acc Oxidase Length = 319 8e-18
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 7e-17
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 2e-08
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 28/308 (9%)
Query: 1   MEERR----RIPTIDLGEFPKQLKKLRE--------ASEEWGCFRVVNHKVSSTLMAEMK 48
           +EE++    ++PTIDL       +K+RE        AS +WG   ++NH + + LM  +K
Sbjct: 36  LEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVK 95
Query: 49  QVVRELLDLPLEIKRR-----NTDVIAGSG-YVAPTQKNPLYEALGLYDMASSQAVADFC 102
           +   E   L +E K +      T  I G G  +A      L      + +A  +   D  
Sbjct: 96  KAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLS 155
Query: 103 SHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQ-------DWPCQFRINK 155
                     E   +YA+ ++ LA  +   L+  +GL     +       +   Q +IN 
Sbjct: 156 IWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINY 215
Query: 156 YNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDI 215
           Y   P+   + GV+ HTD   LT +  +  V GL++    G +V    +P ++++++GD 
Sbjct: 216 YPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLF-YEGKWVTAKCVPDSIVMHIGDT 273
Query: 216 ATVWSNGRLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAP-AEFVDAEHPRLYVPITF 274
             + SNG+  ++ HR    +  +R+S A F   PK+  V  P  E V  E P  + P TF
Sbjct: 274 LEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTF 333
Query: 275 EDYRKLRL 282
             + + +L
Sbjct: 334 AQHIEHKL 341
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query299
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-67
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 3e-63
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-59
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 6e-54
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-50
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 6e-48
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
 Score =  212 bits (541), Expect = 2e-67
 Identities = 75/319 (23%), Positives = 144/319 (45%), Gaps = 35/319 (10%)

Query: 1   MEERRRIPTIDLGEF-----PKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELL 55
           ME     P I L +         ++ +++A E WG F +VNH +   +M  ++++ +   
Sbjct: 1   MEN---FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHY 57

Query: 56  DLPLEIKRRNTDVIAG-SGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQ-RE 113
              +E + +         G  A            L  +  S       S +     + RE
Sbjct: 58  KKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNI-----SEVPDLDEEYRE 112

Query: 114 TIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFRINKYNFAPESVGSP 166
            +  +A+ +++LA +L   L E++GL     ++            +++ Y   P+    P
Sbjct: 113 VMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPK----P 168

Query: 167 ----GVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNG 222
               G++ HTD+G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG
Sbjct: 169 DLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNG 227

Query: 223 RLLNVKHRVQCKESAIRVSIATFLLGPKEAAVEAPAEFVDA---EHPRLYVPITFEDYRK 279
           +  +V HRV  ++   R+S+A+F     +A +      V+    E+ ++Y    F+DY K
Sbjct: 228 KYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMK 287

Query: 280 LRLSTNLQAGEA-LELVRS 297
           L      QA E   E +++
Sbjct: 288 LYAGLKFQAKEPRFEAMKA 306
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.71
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 91.76
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 91.57
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 90.05
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 89.47
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 85.84
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.62
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 84.23
3i3q_A211 Alpha-ketoglutarate-dependent dioxygenase ALKB; be 81.52
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=2.3e-73  Score=513.72  Aligned_cols=283  Identities=21%  Similarity=0.327  Sum_probs=244.0

Q ss_pred             CCCCCCCceEECCCch----HHHHHHHHHhhhccEEEEecCCCCHHHHHHHHHHHHHhcCCCHHHhhhccCC-CCCCCCC
Q 036868            1 MEERRRIPTIDLGEFP----KQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDV-IAGSGYV   75 (299)
Q Consensus         1 M~~~~~iP~IDl~~l~----~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~   75 (299)
                      |+. ++||+|||+.+.    .++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++||+
T Consensus         2 m~~-~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~   80 (312)
T 3oox_A            2 MST-SAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYI   80 (312)
T ss_dssp             --C-CSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEE
T ss_pred             CCC-CCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccc
Confidence            653 489999999873    2789999999999999999999999999999999999999999999998763 4568998


Q ss_pred             CCCCC-------CCchhhcCcCCC-CC-chHHHhh--cCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Q 036868           76 APTQK-------NPLYEALGLYDM-AS-SQAVADF--CSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVF  144 (299)
Q Consensus        76 ~~~~~-------~~~~E~~~~~~~-~~-~~~~~~~--~~~~~~~~~~~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f  144 (299)
                      +.+.+       .|++|.|.+... .. .......  ..||+.+|+||+.+++|+++|.+++..|+++||++||+++++|
T Consensus        81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f  160 (312)
T 3oox_A           81 PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF  160 (312)
T ss_dssp             CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred             cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence            76543       367888876431 11 1111111  2367778999999999999999999999999999999999988


Q ss_pred             cC----cCcceeeeeccCCCCCCCCCcccccccCCceeEEecCCCCCeeeEEcCCCCeEeccCCCCcEEEEcchHHHHHh
Q 036868          145 QD----WPCQFRINKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWS  220 (299)
Q Consensus       145 ~~----~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTll~~~~~~~GLqv~~~~g~W~~v~~~~g~~vvn~Gd~l~~~T  220 (299)
                      .+    ..+.+|++||||++.+....|+++|||+|+||+|+|| .++||||++++|+|++|+|++|++|||+||+||+||
T Consensus       161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T  239 (312)
T 3oox_A          161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLT  239 (312)
T ss_dssp             HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHT
T ss_pred             HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHh
Confidence            54    3578999999998875445899999999999999998 699999999999999999999999999999999999


Q ss_pred             CCCccCCCCceecCC----CCceEEEEEcccCCCCCeeeCCccccCCCCCCCCC-CccHHHHHHHHHHcc
Q 036868          221 NGRLLNVKHRVQCKE----SAIRVSIATFLLGPKEAAVEAPAEFVDAEHPRLYV-PITFEDYRKLRLSTN  285 (299)
Q Consensus       221 ~G~~~s~~HRV~~~~----~~~R~S~~~F~~p~~d~~i~p~~~~~~~~~~~~y~-~~~~~e~~~~~~~~~  285 (299)
                      ||+||||+|||+.++    +.+|||++||++|+.|++|+|+++|+++++|++|+ ++|++||++.+++..
T Consensus       240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~  309 (312)
T 3oox_A          240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI  309 (312)
T ss_dssp             TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred             CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence            999999999998764    46799999999999999999999999999999999 999999999998753
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 299
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-50
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-48
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-40
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 2e-29
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  165 bits (419), Expect = 5e-50
 Identities = 69/307 (22%), Positives = 144/307 (46%), Gaps = 20/307 (6%)

Query: 7   IPTIDLGEF-----PKQLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEI 61
            P I L +         ++ +++A E WG F +VNH +   +M  ++++ +      +E 
Sbjct: 3   FPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQ 62

Query: 62  KRRNTDVIAGSGYVAPTQKNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQA 121
           + +   ++A         +    +    + +     +++     D     RE +  +A+ 
Sbjct: 63  RFKE--LVASKALEGVQAEVTDMDWESTFFLKHLP-ISNISEVPDLDEEYREVMRDFAKR 119

Query: 122 IQELALDLAHKLAESMGLMDSVFQDWPC-------QFRINKYNFAPESVGSPGVQLHTDS 174
           +++LA +L   L E++GL     ++            +++ Y   P+     G++ HTD+
Sbjct: 120 LEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDA 179

Query: 175 GFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQCK 234
           G + +L  D+ V GL+++ + G ++ V P+  +++VNLGD   V +NG+  +V HRV  +
Sbjct: 180 GGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQ 238

Query: 235 ESAIRVSIATFLLGPKEAAVEAPAEFVD---AEHPRLYVPITFEDYRKLRLSTNLQAGEA 291
           +   R+S+A+F     +A +      V+    E+ ++Y    F+DY KL      QA E 
Sbjct: 239 KDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEP 298

Query: 292 -LELVRS 297
             E +++
Sbjct: 299 RFEAMKA 305
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query299
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 95.11
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 83.27
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=1.1e-71  Score=500.51  Aligned_cols=287  Identities=25%  Similarity=0.447  Sum_probs=249.0

Q ss_pred             CCceEECCCchH-----HHHHHHHHhhhccEEEEecCCCCHHHHHHHHHHHHHhcCCCHHHhhhccCC-CCCCCCCCCCC
Q 036868            6 RIPTIDLGEFPK-----QLKKLREASEEWGCFRVVNHKVSSTLMAEMKQVVRELLDLPLEIKRRNTDV-IAGSGYVAPTQ   79 (299)
Q Consensus         6 ~iP~IDl~~l~~-----~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~~~~~   79 (299)
                      +||+|||+.+..     ++++|.+||+++|||||+||||+.++++++++.+++||++|.|+|.++... ....||.+...
T Consensus         2 ~lPvIDl~~~~~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~~~~~   81 (307)
T d1w9ya1           2 NFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVT   81 (307)
T ss_dssp             CCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred             CCCeEECcccCCcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCcccccc
Confidence            799999998742     688999999999999999999999999999999999999999999986532 23478876666


Q ss_pred             CCCchhhcCcCCCCCchHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccCc-------Cccee
Q 036868           80 KNPLYEALGLYDMASSQAVADFCSHLDASPHQRETIEKYAQAIQELALDLAHKLAESMGLMDSVFQDW-------PCQFR  152 (299)
Q Consensus        80 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~-------~~~lr  152 (299)
                      ..+.+|.|.+......    ....+++.+++|++.+++|++.|.+++.+|+++|+++||+++++|.+.       .+.+|
T Consensus        82 ~~d~~e~~~~~~~~~~----~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lr  157 (307)
T d1w9ya1          82 DMDWESTFFLKHLPIS----NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTK  157 (307)
T ss_dssp             GCCCCEEEEEEEESCC----GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEE
T ss_pred             ccChhhhccccccccc----CcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhccccccccce
Confidence            6778888766432211    123467788999999999999999999999999999999999988542       35789


Q ss_pred             eeeccCCCCCCCCCcccccccCCceeEEecCCCCCeeeEEcCCCCeEeccCCCCcEEEEcchHHHHHhCCCccCCCCcee
Q 036868          153 INKYNFAPESVGSPGVQLHTDSGFLTILQDDENVGGLEVMDRSGAFVPVDPLPGTLLVNLGDIATVWSNGRLLNVKHRVQ  232 (299)
Q Consensus       153 ~~~Yp~~~~~~~~~~~~~HtD~~~lTll~~~~~~~GLqv~~~~g~W~~v~~~~g~~vvn~Gd~l~~~T~G~~~s~~HRV~  232 (299)
                      +++||+++.+....|+++|||+|+||+|+|++.++||||. ++|+|++|+|.+|++|||+||+||+||||+||||.|||+
T Consensus       158 ~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~~-~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv  236 (307)
T d1w9ya1         158 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVI  236 (307)
T ss_dssp             EEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEC
T ss_pred             ecCCCCCcccccccccccccccceeEEeeccCCCCeEEEe-cCCcEEEeccCCCeEEEEcchhhHHhhCCcccCcCceee
Confidence            9999999988888899999999999999997568999997 589999999999999999999999999999999999999


Q ss_pred             cCCCCceEEEEEcccCCCCCeeeCCccccC---CCCCCCCCCccHHHHHHHHHHccCCCCh-hhhhhhc
Q 036868          233 CKESAIRVSIATFLLGPKEAAVEAPAEFVD---AEHPRLYVPITFEDYRKLRLSTNLQAGE-ALELVRS  297 (299)
Q Consensus       233 ~~~~~~R~S~~~F~~p~~d~~i~p~~~~~~---~~~~~~y~~~~~~e~~~~~~~~~~~~~~-~~~~~~~  297 (299)
                      .+++.+|||++||++|+.|++|.|+++|++   +++|++|++||++||++.+.++++++++ .++.+|.
T Consensus       237 ~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~  305 (307)
T d1w9ya1         237 AQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA  305 (307)
T ss_dssp             CCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred             cCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhc
Confidence            988889999999999999999999999986   5679999999999999999999998865 4777663
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure