Citrus Sinensis ID: 036887

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360------
MVIGSNQRLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
ccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccEEEEEEccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHcccccccccccHHHHHcc
ccccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccccEcccccccHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccccccccHHEEcEEEHHccccccccccHHHccEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcEEEEEEccccHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHcHHHcccEEcccccccccccccEEEcccccccccccccEEEEcccccHHHHHHHHHHHHHcccccccccccHHHHHcc
mvigsnqrlsfTGFWVLIVILSYSNGVAESQVVRGIFVFGDslvdvgnnnylssiaksnyypygvdfeygptgrfsngkTFVDFIGKimglpyplafadpntngarllggVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGsndyinnylmpsiysssfyynpsQYANLLLNHYARQLLALYSVGLRNfflagigplgcipnqrgsgqappgrcvdYVNQILGPFNEGLRSLVDQLnkrpgamfvygntygsvgdilnnpatfgfnVVDRaccgigrnqgqitclpfampcfnrnqyvfwdafhpTEAVNAILARRAVygssadcypinmlnmtlh
mvigsnqrlsftGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPInmlnmtlh
MVIGSNQRLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
*******RLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQR*****PPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLN****
************GFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRG*MG*SNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
MVIGSNQRLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
*****NQRLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVIGSNQRLSFTGFWVLIVILSYSNGVAESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query366 2.2.26 [Sep-21-2011]
Q9FVV1374 GDSL esterase/lipase At1g yes no 0.964 0.943 0.622 1e-134
Q9FNP2385 GDSL esterase/lipase At5g no no 0.994 0.945 0.510 1e-108
Q9C7N4363 GDSL esterase/lipase At1g no no 0.942 0.950 0.525 3e-92
Q9SF78384 GDSL esterase/lipase At1g no no 0.893 0.851 0.479 6e-86
Q93YW8361 GDSL esterase/lipase At4g no no 0.877 0.889 0.495 2e-85
Q9C7N5364 GDSL esterase/lipase At1g no no 0.961 0.967 0.470 4e-84
Q9FK75362 GDSL esterase/lipase At5g no no 0.964 0.975 0.458 4e-83
Q8LFJ9364 GDSL esterase/lipase 7 OS no no 0.887 0.892 0.490 1e-81
Q8L5Z1370 GDSL esterase/lipase At1g no no 0.926 0.916 0.448 3e-78
O80470387 GDSL esterase/lipase At2g no no 0.885 0.837 0.403 3e-69
>sp|Q9FVV1|GDL28_ARATH GDSL esterase/lipase At1g71250 OS=Arabidopsis thaliana GN=At1g71250 PE=2 SV=1 Back     alignment and function desciption
 Score =  479 bits (1234), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 224/360 (62%), Positives = 286/360 (79%), Gaps = 7/360 (1%)

Query: 13  GFWVLIVILSYSNGVAESQVVRG------IFVFGDSLVDVGNNNYLSSIAKSNYYPYGVD 66
           G +VLI+ L+ S  + + ++V G      +FV GDSLVD GNNN+L ++A++N+ PYG+D
Sbjct: 13  GGYVLILALTVSVILQQPELVTGQARVPAMFVLGDSLVDAGNNNFLQTVARANFLPYGID 72

Query: 67  FEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQ 126
             Y PTGRFSNG TF+D + +++ +P P  FADP T+G R+L GVNYASAAAGILD +G 
Sbjct: 73  MNYQPTGRFSNGLTFIDLLARLLEIPSPPPFADPTTSGNRILQGVNYASAAAGILDVSGY 132

Query: 127 HYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYS 186
           +YG R++L+QQ++N E+TL+QLR +M   N T+YL++S+ ++VFGSNDYINNYLMP++Y 
Sbjct: 133 NYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYD 192

Query: 187 SSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVD 246
           SS  + P  +ANLLL+ YARQLL LYS+GLR  F+ G+ PLGCIPNQR  G +PP RCVD
Sbjct: 193 SSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQRARGISPPDRCVD 252

Query: 247 YVNQILGPFNEGLRSLVDQLNKR-PGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGI 305
            VNQILG FN+GL+SLVDQLN+R PGA++VYGNTY ++GDILNNPA +GF+VVDRACCGI
Sbjct: 253 SVNQILGTFNQGLKSLVDQLNQRSPGAIYVYGNTYSAIGDILNNPAAYGFSVVDRACCGI 312

Query: 306 GRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTL 365
           GRNQGQITCLP   PC NRNQYVFWDAFHPT+  N+ILARRA YG  +D YP+N+  MTL
Sbjct: 313 GRNQGQITCLPLQTPCPNRNQYVFWDAFHPTQTANSILARRAFYGPPSDAYPVNVQQMTL 372

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9FNP2|GDL75_ARATH GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7N4|GDL15_ARATH GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1 Back     alignment and function description
>sp|Q9SF78|GDL29_ARATH GDSL esterase/lipase At1g71691 OS=Arabidopsis thaliana GN=At1g71691 PE=2 SV=1 Back     alignment and function description
>sp|Q93YW8|GDL65_ARATH GDSL esterase/lipase At4g18970 OS=Arabidopsis thaliana GN=At4g18970 PE=2 SV=1 Back     alignment and function description
>sp|Q9C7N5|GDL14_ARATH GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1 Back     alignment and function description
>sp|Q9FK75|GDL82_ARATH GDSL esterase/lipase At5g45670 OS=Arabidopsis thaliana GN=At5g45670 PE=2 SV=1 Back     alignment and function description
>sp|Q8LFJ9|GLIP7_ARATH GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1 Back     alignment and function description
>sp|Q8L5Z1|GDL17_ARATH GDSL esterase/lipase At1g33811 OS=Arabidopsis thaliana GN=At1g33811 PE=2 SV=1 Back     alignment and function description
>sp|O80470|GDL38_ARATH GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
224127941354 predicted protein [Populus trichocarpa] 0.950 0.983 0.784 1e-150
255561198368 zinc finger protein, putative [Ricinus c 0.956 0.951 0.720 1e-143
225459955363 PREDICTED: GDSL esterase/lipase At1g7125 0.928 0.936 0.703 1e-140
147821084385 hypothetical protein VITISV_030206 [Viti 0.928 0.883 0.661 1e-136
297838953374 predicted protein [Arabidopsis lyrata su 0.964 0.943 0.625 1e-133
15224005374 GDSL esterase/lipase [Arabidopsis thalia 0.964 0.943 0.622 1e-133
356531722370 PREDICTED: GDSL esterase/lipase At1g7125 0.950 0.940 0.657 1e-133
449474438342 PREDICTED: GDSL esterase/lipase At1g7125 0.926 0.991 0.661 1e-128
449454933360 PREDICTED: GDSL esterase/lipase At1g7125 0.926 0.941 0.661 1e-128
225463203370 PREDICTED: GDSL esterase/lipase At5g0846 0.898 0.889 0.639 1e-123
>gi|224127941|ref|XP_002329215.1| predicted protein [Populus trichocarpa] gi|222870996|gb|EEF08127.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/352 (78%), Positives = 309/352 (87%), Gaps = 4/352 (1%)

Query: 16  VLIVILSYSNGVA-ESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDF-EYGPTG 73
           ++I  L  SNG+A ES+ V  +FVFGDSLVDVGNNNYLSSIAK+NY+PYGVDF ++GPTG
Sbjct: 3   LIIFFLHCSNGIAVESERVPALFVFGDSLVDVGNNNYLSSIAKANYFPYGVDFAKFGPTG 62

Query: 74  RFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYT 133
           RFSNGKTFVD +G+I+G+PYP AFADPNT G  +LGGVNYASAAAGILDETGQHYGQRY+
Sbjct: 63  RFSNGKTFVDILGEILGVPYPPAFADPNTAGPVILGGVNYASAAAGILDETGQHYGQRYS 122

Query: 134 LSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNP 193
           LSQQVLNFE+TLNQ+R +M  +NLT YL KSIA++VFGSNDYINNYLMPS+YSSSFYY+P
Sbjct: 123 LSQQVLNFETTLNQIRTLMSGTNLTEYLGKSIAVLVFGSNDYINNYLMPSVYSSSFYYSP 182

Query: 194 SQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILG 253
             +ANLL+NHY RQLLALY++GLR F L GIGPLGCIPNQR S  APP RCVDYVNQILG
Sbjct: 183 PDFANLLVNHYTRQLLALYNLGLRKFLLPGIGPLGCIPNQRAS--APPDRCVDYVNQILG 240

Query: 254 PFNEGLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQIT 313
            FNEGLRSLVDQLNK PGAMFVYGNTYGSVGDILNNP T+GF+VVD+ CCGIGRNQGQIT
Sbjct: 241 TFNEGLRSLVDQLNKHPGAMFVYGNTYGSVGDILNNPGTYGFSVVDKGCCGIGRNQGQIT 300

Query: 314 CLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTL 365
           CLP+ +PC NRN YVFWDAFHPTEAVNAILA RA  GS  DCYPIN+  MTL
Sbjct: 301 CLPWVVPCSNRNTYVFWDAFHPTEAVNAILALRAFNGSQRDCYPINVQQMTL 352

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255561198|ref|XP_002521611.1| zinc finger protein, putative [Ricinus communis] gi|223539289|gb|EEF40882.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225459955|ref|XP_002266194.1| PREDICTED: GDSL esterase/lipase At1g71250 [Vitis vinifera] gi|297734752|emb|CBI16986.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147821084|emb|CAN77693.1| hypothetical protein VITISV_030206 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297838953|ref|XP_002887358.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297333199|gb|EFH63617.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15224005|ref|NP_177281.1| GDSL esterase/lipase [Arabidopsis thaliana] gi|75172677|sp|Q9FVV1.1|GDL28_ARATH RecName: Full=GDSL esterase/lipase At1g71250; AltName: Full=Extracellular lipase At1g71250; Flags: Precursor gi|12323837|gb|AAG51891.1|AC016162_12 putative GDSL-motif lipase/acylhydrolase; 82739-81282 [Arabidopsis thaliana] gi|26449830|dbj|BAC42038.1| putative GDSL-motif lipase/acylhydrolase [Arabidopsis thaliana] gi|28950931|gb|AAO63389.1| At1g71250 [Arabidopsis thaliana] gi|332197059|gb|AEE35180.1| GDSL esterase/lipase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356531722|ref|XP_003534425.1| PREDICTED: GDSL esterase/lipase At1g71250-like [Glycine max] Back     alignment and taxonomy information
>gi|449474438|ref|XP_004154173.1| PREDICTED: GDSL esterase/lipase At1g71250-like [Cucumis sativus] gi|449503349|ref|XP_004161958.1| PREDICTED: GDSL esterase/lipase At1g71250-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449454933|ref|XP_004145208.1| PREDICTED: GDSL esterase/lipase At1g71250-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225463203|ref|XP_002267889.1| PREDICTED: GDSL esterase/lipase At5g08460 [Vitis vinifera] gi|296084819|emb|CBI27701.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query366
TAIR|locus:2032333374 AT1G71250 "AT1G71250" [Arabido 0.964 0.943 0.622 9.9e-126
TAIR|locus:2159547385 AT5G08460 "AT5G08460" [Arabido 0.956 0.909 0.529 6.2e-101
TAIR|locus:2013663363 AT1G29670 "AT1G29670" [Arabido 0.942 0.950 0.529 4.5e-91
TAIR|locus:2824531384 AT1G71691 "AT1G71691" [Arabido 0.885 0.843 0.483 1.9e-83
TAIR|locus:2013658364 AT1G29660 "AT1G29660" [Arabido 0.931 0.936 0.491 1.3e-82
TAIR|locus:2171948362 AT5G45670 "AT5G45670" [Arabido 0.937 0.947 0.467 5.8e-82
TAIR|locus:2143156364 GLIP7 "AT5G15720" [Arabidopsis 0.945 0.950 0.470 1.5e-81
TAIR|locus:505006166370 AT1G33811 "AT1G33811" [Arabido 0.928 0.918 0.454 4.3e-77
TAIR|locus:2046743387 AT2G23540 "AT2G23540" [Arabido 0.885 0.837 0.403 1.5e-67
TAIR|locus:2019155366 AT1G74460 "AT1G74460" [Arabido 0.898 0.898 0.394 5.4e-63
TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
 Identities = 224/360 (62%), Positives = 286/360 (79%)

Query:    13 GFWVLIVILSYSNGVAESQVVRG------IFVFGDSLVDVGNNNYLSSIAKSNYYPYGVD 66
             G +VLI+ L+ S  + + ++V G      +FV GDSLVD GNNN+L ++A++N+ PYG+D
Sbjct:    13 GGYVLILALTVSVILQQPELVTGQARVPAMFVLGDSLVDAGNNNFLQTVARANFLPYGID 72

Query:    67 FEYGPTGRFSNGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQ 126
               Y PTGRFSNG TF+D + +++ +P P  FADP T+G R+L GVNYASAAAGILD +G 
Sbjct:    73 MNYQPTGRFSNGLTFIDLLARLLEIPSPPPFADPTTSGNRILQGVNYASAAAGILDVSGY 132

Query:   127 HYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYS 186
             +YG R++L+QQ++N E+TL+QLR +M   N T+YL++S+ ++VFGSNDYINNYLMP++Y 
Sbjct:   133 NYGGRFSLNQQMVNLETTLSQLRTMMSPQNFTDYLARSLVVLVFGSNDYINNYLMPNLYD 192

Query:   187 SSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVD 246
             SS  + P  +ANLLL+ YARQLL LYS+GLR  F+ G+ PLGCIPNQR  G +PP RCVD
Sbjct:   193 SSIRFRPPDFANLLLSQYARQLLTLYSLGLRKIFIPGVAPLGCIPNQRARGISPPDRCVD 252

Query:   247 YVNQILGPFNEGLRSLVDQLNKR-PGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGI 305
              VNQILG FN+GL+SLVDQLN+R PGA++VYGNTY ++GDILNNPA +GF+VVDRACCGI
Sbjct:   253 SVNQILGTFNQGLKSLVDQLNQRSPGAIYVYGNTYSAIGDILNNPAAYGFSVVDRACCGI 312

Query:   306 GRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYGSSADCYPINMLNMTL 365
             GRNQGQITCLP   PC NRNQYVFWDAFHPT+  N+ILARRA YG  +D YP+N+  MTL
Sbjct:   313 GRNQGQITCLPLQTPCPNRNQYVFWDAFHPTQTANSILARRAFYGPPSDAYPVNVQQMTL 372
GO:0004091 "carboxylesterase activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016298 "lipase activity" evidence=IEA
GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA
TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013663 AT1G29670 "AT1G29670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006166 AT1G33811 "AT1G33811" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046743 AT2G23540 "AT2G23540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019155 AT1G74460 "AT1G74460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FVV1GDL28_ARATH3, ., 1, ., 1, ., -0.62220.96440.9438yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.10.691
3rd Layer3.1.1.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.125.90.1
hypothetical protein (335 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
cd01837315 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase 1e-120
PLN03156351 PLN03156, PLN03156, GDSL esterase/lipase; Provisio 6e-71
cd01846270 cd01846, fatty_acyltransferase_like, Fatty acyltra 7e-36
COG3240370 COG3240, COG3240, Phospholipase/lecithinase/hemoly 1e-20
cd01847281 cd01847, Triacylglycerol_lipase_like, Triacylglyce 3e-11
pfam00657219 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro 2e-09
>gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information 
 Score =  349 bits (897), Expect = e-120
 Identities = 131/318 (41%), Positives = 189/318 (59%), Gaps = 7/318 (2%)

Query: 36  IFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEYGPTGRFSNGKTFVDFIGKIMGLPYPL 95
           +FVFGDSLVD GNNNYL ++AK+N+ PYG+DF   PTGRFSNG+  +DFI + +GLP   
Sbjct: 3   LFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLP 62

Query: 96  AFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGAS 155
                    +  L GVN+AS  AGILD TG   G   +LS Q+  F+    +LR ++G  
Sbjct: 63  PPYLSPNGSSDFLTGVNFASGGAGILDSTGF-LGSVISLSVQLEYFKEYKERLRALVGEE 121

Query: 156 NLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVG 215
              + LSKS+ ++  GSNDY+NNY        +  Y    Y   L+++ +  +  LY +G
Sbjct: 122 AAADILSKSLFLISIGSNDYLNNYFAN----PTRQYEVEAYVPFLVSNISSAIKRLYDLG 177

Query: 216 LRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKR-PGAMF 274
            R F + G+GPLGC+P+QR       G C++ +N++   FN  L+ L+ +L +  PGA F
Sbjct: 178 ARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKF 237

Query: 275 VYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPF-AMPCFNRNQYVFWDAF 333
           VY + Y ++ D++ NPA +GF    +ACCG G  +G + C P  +  C + ++YVFWD  
Sbjct: 238 VYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWDGV 297

Query: 334 HPTEAVNAILARRAVYGS 351
           HPTEA N I+A   + G 
Sbjct: 298 HPTEAANRIIADALLSGP 315

The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315
>gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional Back     alignment and domain information
>gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|225780 COG3240, COG3240, Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|238883 cd01847, Triacylglycerol_lipase_like, Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 366
PLN03156351 GDSL esterase/lipase; Provisional 100.0
cd01837315 SGNH_plant_lipase_like SGNH_plant_lipase_like, a p 100.0
cd01847281 Triacylglycerol_lipase_like Triacylglycerol lipase 100.0
PRK15381408 pathogenicity island 2 effector protein SseJ; Prov 100.0
cd01846270 fatty_acyltransferase_like Fatty acyltransferase-l 100.0
COG3240370 Phospholipase/lecithinase/hemolysin [Lipid metabol 100.0
PF00657234 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter 99.95
cd01839208 SGNH_arylesterase_like SGNH_hydrolase subfamily, s 99.47
cd01832185 SGNH_hydrolase_like_1 Members of the SGNH-hydrolas 99.45
cd04501183 SGNH_hydrolase_like_4 Members of the SGNH-hydrolas 99.4
cd01836191 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee 99.38
cd01844177 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG 99.34
PRK10528191 multifunctional acyl-CoA thioesterase I and protea 99.33
cd01830204 XynE_like SGNH_hydrolase subfamily, similar to the 99.32
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 99.32
cd01823259 SEST_like SEST_like. A family of secreted SGNH-hyd 99.31
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 99.3
cd01838199 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd 99.28
cd01821198 Rhamnogalacturan_acetylesterase_like Rhamnogalactu 99.26
cd01825189 SGNH_hydrolase_peri1 SGNH_peri1; putative periplas 99.23
cd04506204 SGNH_hydrolase_YpmR_like Members of the SGNH-hydro 99.19
cd01824288 Phospholipase_B_like Phospholipase-B_like. This su 99.17
PF13472179 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami 99.17
cd00229187 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, 99.17
cd01835193 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG 99.15
cd01822177 Lysophospholipase_L1_like Lysophospholipase L1-lik 99.14
cd01820214 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A 99.14
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 99.13
cd01831169 Endoglucanase_E_like Endoglucanase E-like members 99.05
cd01841174 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa 99.0
cd01828169 sialate_O-acetylesterase_like2 sialate_O-acetylest 98.91
cd04502171 SGNH_hydrolase_like_7 Members of the SGNH-hydrolas 98.89
cd01833157 XynB_like SGNH_hydrolase subfamily, similar to Rum 98.86
cd01826305 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l 98.57
COG2755216 TesA Lysophospholipase L1 and related esterases [A 98.41
PF14606178 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase fami 98.4
cd01840150 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG 98.16
KOG3670397 consensus Phospholipase [Lipid transport and metab 98.07
KOG3035245 consensus Isoamyl acetate-hydrolyzing esterase [Li 97.89
COG2845354 Uncharacterized protein conserved in bacteria [Fun 95.94
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 92.73
PF08885251 GSCFA: GSCFA family; InterPro: IPR014982 This grou 89.63
>PLN03156 GDSL esterase/lipase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.1e-77  Score=578.23  Aligned_cols=320  Identities=36%  Similarity=0.633  Sum_probs=276.9

Q ss_pred             cccCCccEEEEcCCcccccCCCCccccccccCCCCCCCCCCC-CCcccCCCCCcHHHHHHHhhCC-CCCCCCCCCCCCCC
Q 036887           28 AESQVVRGIFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFEY-GPTGRFSNGKTFVDFIGKIMGL-PYPLAFADPNTNGA  105 (366)
Q Consensus        28 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~Pyg~~~~~-~~~gRfSnG~~w~d~la~~lg~-~~~p~y~~~~~~~~  105 (366)
                      +..+++++|||||||++|+||++++.+..++++||||++||+ +|+||||||++|+||||+.||+ |.+|||+++..++.
T Consensus        22 ~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~  101 (351)
T PLN03156         22 ETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNIS  101 (351)
T ss_pred             cccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCch
Confidence            335679999999999999999988776667889999999986 6999999999999999999999 89999998765566


Q ss_pred             CCCCCcceeeecccccCCCCCCcccccCHHHHHHHHHHHHHHHHHhhCchhhhhhcCCcEEEEEeccchhhhhhcCCccc
Q 036887          106 RLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYINNYLMPSIY  185 (366)
Q Consensus       106 ~~~~g~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~  185 (366)
                      +..+|+|||+||+++.+.+.. .....+|..||++|.++++++....|.+.+++..+++||+||||+|||+..|....  
T Consensus       102 ~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~--  178 (351)
T PLN03156        102 DFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFP--  178 (351)
T ss_pred             hhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccc--
Confidence            789999999999998776542 12356899999999998888776666655666789999999999999985543211  


Q ss_pred             CCCCccChhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCccCCCCCCCCCCCCchhhhhhhhHHHHHHHHHHHHH
Q 036887          186 SSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQ  265 (366)
Q Consensus       186 ~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~n~~~~~~N~~L~~~l~~  265 (366)
                      .......++++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+.....+..+|.+.+|.+++.||++|++++++
T Consensus       179 ~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~  258 (351)
T PLN03156        179 GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTK  258 (351)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            11223346788999999999999999999999999999999999998765422234689999999999999999999999


Q ss_pred             hh-cCCCceEEEecchhhHHHHHhCCCCCCCcccCccccCCcccCCccccCCCC-cCCCCCCCcEEecCCChhHHHHHHH
Q 036887          266 LN-KRPGAMFVYGNTYGSVGDILNNPATFGFNVVDRACCGIGRNQGQITCLPFA-MPCFNRNQYVFWDAFHPTEAVNAIL  343 (366)
Q Consensus       266 l~-~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~aCc~~g~~~~~~~C~~~~-~~C~~p~~ylfwD~vHPT~~~h~~i  343 (366)
                      |+ ++|+++|+++|+|+++.++++||++|||++++++||+.|.++....|++.. .+|+||++|+|||++||||++|++|
T Consensus       259 L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~i  338 (351)
T PLN03156        259 LNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQII  338 (351)
T ss_pred             HHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHHHH
Confidence            99 999999999999999999999999999999999999988888778898755 5899999999999999999999999


Q ss_pred             HHHHhcC
Q 036887          344 ARRAVYG  350 (366)
Q Consensus       344 A~~~~~~  350 (366)
                      |+.++++
T Consensus       339 A~~~~~~  345 (351)
T PLN03156        339 ANHVVKT  345 (351)
T ss_pred             HHHHHHH
Confidence            9999876

>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional Back     alignment and domain information
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] Back     alignment and domain information
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] Back     alignment and domain information
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A Back     alignment and domain information
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases Back     alignment and domain information
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily Back     alignment and domain information
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional Back     alignment and domain information
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01823 SEST_like SEST_like Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins Back     alignment and domain information
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01824 Phospholipase_B_like Phospholipase-B_like Back     alignment and domain information
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A Back     alignment and domain information
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases Back     alignment and domain information
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases Back     alignment and domain information
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans Back     alignment and domain information
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases Back     alignment and domain information
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB Back     alignment and domain information
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family Back     alignment and domain information
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] Back     alignment and domain information
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B Back     alignment and domain information
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>KOG3670 consensus Phospholipase [Lipid transport and metabolism] Back     alignment and domain information
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query366
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 4e-63
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 Back     alignment and structure
 Score =  211 bits (538), Expect = 4e-63
 Identities = 61/336 (18%), Positives = 103/336 (30%), Gaps = 27/336 (8%)

Query: 36  IFVFGDSLVDVGNNNYLSSIAKSNYYPYGVDFE-YGPTGRFSNGKTFVDFIGKIMGLP-- 92
           + VFGDSL D G     +  A S           Y        G T    +G  +G+   
Sbjct: 18  LVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTYQNGSGEIFGPTAPMLLGNQLGIAPG 77

Query: 93  YPLAFADPNTNGARLLGGVNYASAAAGILDETGQHYGQRYTLSQQVLNFESTLNQLRGIM 152
              A   P      +  G N+A                  +L ++      + +      
Sbjct: 78  DLAASTSPVNAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDR 137

Query: 153 GASNLTNYLSKSIAIMVFGSNDYINNYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALY 212
               L      ++  +  G ND++   ++             Q A  L++     + AL 
Sbjct: 138 ARQGLG-ADPNALYYITGGGNDFLQGRILND-------VQAQQAAGRLVD----SVQALQ 185

Query: 213 SVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGA 272
             G R   +  +  LG  P   G           + +Q+ G FN  L + + Q     GA
Sbjct: 186 QAGARYIVVWLLPDLGLTPATFGGP------LQPFASQLSGTFNAELTAQLSQ----AGA 235

Query: 273 MFVYGNTYGSVGDILNNPATFGFNVVDR--ACCGIGRNQGQITCLPFAMPCFNRNQYVFW 330
             +  N    + + + NPA+FG          C  G                + ++ +F 
Sbjct: 236 NVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFN 295

Query: 331 DAFHPTEAVNAILARRAVYGSSADCYPINMLNMTLH 366
           D+ HPT     ++A       SA      +  M   
Sbjct: 296 DSVHPTITGQRLIADYTYSLLSAPWELTLLPEMAHG 331

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
3kvn_X 632 Esterase ESTA; beta barrel, alpha-beta-alpha motif 100.0
3mil_A240 Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola 99.68
3rjt_A216 Lipolytic protein G-D-S-L family; PSI-biology, mid 99.58
2q0q_A216 ARYL esterase; SGNH hydrolase, oligomeric enzyme, 99.54
1yzf_A195 Lipase/acylhydrolase; structural GENO PSI, protein 99.52
2hsj_A214 Putative platelet activating factor; structr genom 99.47
3dci_A232 Arylesterase; SGNH_hydrolase SUBF structural genom 99.47
1vjg_A218 Putative lipase from the G-D-S-L family; structura 99.39
1ivn_A190 Thioesterase I; hydrolase, protease; 1.90A {Escher 99.35
2vpt_A215 Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos 99.3
1esc_A306 Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. 99.3
4hf7_A209 Putative acylhydrolase; PF13472 family, structural 99.29
3dc7_A232 Putative uncharacterized protein LP_3323; NESG LPR 99.28
3hp4_A185 GDSL-esterase; psychrotrophic, monoethylphosphonat 99.25
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 99.24
3p94_A204 GDSL-like lipase; serine hydrolase, catalytic tria 99.13
3skv_A385 SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr 99.09
3bzw_A274 Putative lipase; protein structure initiative II, 99.09
1k7c_A233 Rhamnogalacturonan acetylesterase; N-linked glycos 99.06
2o14_A375 Hypothetical protein YXIM; NESG, X-RAY, SR595, str 99.05
1fxw_F229 Alpha2, platelet-activating factor acetylhydrolase 98.94
2wao_A341 Endoglucanase E; plant cell WALL degradation, carb 98.92
1es9_A232 PAF-AH, platelet-activating factor acetylhydrolase 98.85
2waa_A347 Acetyl esterase, xylan esterase, putative, AXE2C; 98.82
2w9x_A366 AXE2A, CJCE2B, putative acetyl xylan esterase; car 98.62
4i8i_A271 Hypothetical protein; 5-stranded beta sheet flanke 81.04
>3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Back     alignment and structure
Probab=100.00  E-value=6.2e-62  Score=503.85  Aligned_cols=299  Identities=20%  Similarity=0.215  Sum_probs=237.4

Q ss_pred             ccCCccEEEEcCCcccccCCCCcccccc----ccCCCCCCCCCCCCCcccCC-CCCcHHHHHHHhhCCCC--CCCCCCCC
Q 036887           29 ESQVVRGIFVFGDSLVDVGNNNYLSSIA----KSNYYPYGVDFEYGPTGRFS-NGKTFVDFIGKIMGLPY--PLAFADPN  101 (366)
Q Consensus        29 ~~~~~~~l~vFGDSlsD~Gn~~~~~~~~----~~~~~Pyg~~~~~~~~gRfS-nG~~w~d~la~~lg~~~--~p~y~~~~  101 (366)
                      .+++|++||+||||+|||||........    +...|| |.+|   ++|||| ||++|+||||+.||+|.  ++||+...
T Consensus        11 ~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~-g~~~---~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~   86 (632)
T 3kvn_X           11 APSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRV-GPTY---QNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPV   86 (632)
T ss_dssp             CCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBC-SSSC---CTTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHH
T ss_pred             CCCCCccEEEEccccccCCCcccccCCcCCccccccCC-CCcc---ccCcccccCCchHHHHHHHcCCCccccCcccccc
Confidence            3578999999999999999975332211    111123 5555   599999 99999999999999983  55665421


Q ss_pred             CCCCCCCCCcceeeecccc---cCCCCCCcccccCHHHHHHHHH-HHHHHHHHhhCchhhhhhcCCcEEEEEeccchhhh
Q 036887          102 TNGARLLGGVNYASAAAGI---LDETGQHYGQRYTLSQQVLNFE-STLNQLRGIMGASNLTNYLSKSIAIMVFGSNDYIN  177 (366)
Q Consensus       102 ~~~~~~~~g~NfA~gGA~~---~~~~~~~~~~~~~l~~Qv~~f~-~~~~~~~~~~G~~~~~~~~~~sL~~i~iG~ND~~~  177 (366)
                      ..+.++.+|+|||+|||++   .+.+......+++|..||.+|+ .+++++..     ...+..+++||+||||+|||+.
T Consensus        87 ~~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~-----~~~~~~~~sL~~v~iG~ND~~~  161 (632)
T 3kvn_X           87 NAQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRAR-----QGLGADPNALYYITGGGNDFLQ  161 (632)
T ss_dssp             HHHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHT-----TTCCCCTTSEEEECCSHHHHHT
T ss_pred             ccccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhh-----ccCccCCCCEEEEEEechhhhc
Confidence            1245788999999999996   3332222223455666666555 33433221     2245679999999999999986


Q ss_pred             hhcCCcccCCCCccChhhHHHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCccCCCCCCCCCCCCchhhhhhhhHHHHH
Q 036887          178 NYLMPSIYSSSFYYNPSQYANLLLNHYARQLLALYSVGLRNFFLAGIGPLGCIPNQRGSGQAPPGRCVDYVNQILGPFNE  257 (366)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~v~~~v~~i~~~v~~L~~~GAr~~vv~~lpplg~~P~~~~~~~~~~~~~~~~~n~~~~~~N~  257 (366)
                      .+..           ..++++.+++++.++|++||++|||+|+|+++||+||+|...      ..+|.+.+|++++.||+
T Consensus       162 ~~~~-----------~~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~~~------~~~c~~~~n~~~~~~N~  224 (632)
T 3kvn_X          162 GRIL-----------NDVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPATF------GGPLQPFASQLSGTFNA  224 (632)
T ss_dssp             TCCC-----------SHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTTTT------TSTTHHHHHHHHHHHHH
T ss_pred             cccc-----------ChHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccccc------CCCchHHHHHHHHHHHH
Confidence            5431           135688999999999999999999999999999999999953      25899999999999999


Q ss_pred             HHHHHHHHhhcCCCceEEEecchhhHHHHHhCCCCCCCcccC--ccccCCcccCCccccCCC-----CcCCCCCCCcEEe
Q 036887          258 GLRSLVDQLNKRPGAMFVYGNTYGSVGDILNNPATFGFNVVD--RACCGIGRNQGQITCLPF-----AMPCFNRNQYVFW  330 (366)
Q Consensus       258 ~L~~~l~~l~~~~~~~i~~~D~~~~~~~ii~nP~~yGf~n~~--~aCc~~g~~~~~~~C~~~-----~~~C~~p~~ylfw  330 (366)
                      +|++++++|+    .+|+++|+|+++.++++||++|||+++.  ++||+.+.     .|++.     ..+|+||++|+||
T Consensus       225 ~L~~~l~~l~----~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~~~~~~~~~~~C~~~~~y~fw  295 (632)
T 3kvn_X          225 ELTAQLSQAG----ANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCTMNPTYGINGSTPDPSKLLFN  295 (632)
T ss_dssp             HHHHHHHHHC----CCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSCBCTTTSTTSSSCCGGGCSBS
T ss_pred             HHHHHHHhCC----CeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccCCcccccccccCCCccceEEe
Confidence            9999999995    5899999999999999999999999875  69999763     68764     4689999999999


Q ss_pred             cCCChhHHHHHHHHHHHhcCCCCcccCcChhhhhc
Q 036887          331 DAFHPTEAVNAILARRAVYGSSADCYPINMLNMTL  365 (366)
Q Consensus       331 D~vHPT~~~h~~iA~~~~~~~~~~~~P~n~~~l~~  365 (366)
                      |++||||++|++||+.++++   ...|+++++|.+
T Consensus       296 D~~HpTe~~~~~ia~~~~~~---~~~P~~~~~l~~  327 (632)
T 3kvn_X          296 DSVHPTITGQRLIADYTYSL---LSAPWELTLLPE  327 (632)
T ss_dssp             SSSCBCHHHHHHHHHHHHHH---HHTHHHHTTHHH
T ss_pred             cCCCCHHHHHHHHHHHHHhc---cCCCccHHHHHH
Confidence            99999999999999999996   579999998864
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} Back     alignment and structure
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} Back     alignment and structure
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* Back     alignment and structure
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 Back     alignment and structure
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 Back     alignment and structure
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} Back     alignment and structure
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A Back     alignment and structure
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* Back     alignment and structure
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} Back     alignment and structure
>1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A Back     alignment and structure
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 Back     alignment and structure
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 Back     alignment and structure
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} Back     alignment and structure
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} Back     alignment and structure
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9 Back     alignment and structure
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* Back     alignment and structure
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 Back     alignment and structure
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A Back     alignment and structure
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* Back     alignment and structure
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* Back     alignment and structure
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} Back     alignment and structure
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus} Back     alignment and structure
>4i8i_A Hypothetical protein; 5-stranded beta sheet flanked by 8 helices fold, structural joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides uniformis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query366
d1esca_302 Esterase {Streptomyces scabies [TaxId: 1930]} 99.65
d1k7ca_233 Rhamnogalacturonan acetylesterase {Fungus (Aspergi 99.39
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 99.31
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 99.27
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 99.27
d1yzfa1195 Lipase/acylhydrolase {Enterococcus faecalis [TaxId 99.24
d1jrla_179 Thioesterase I, TAP {Escherichia coli [TaxId: 562] 99.06
d1vjga_201 Hypothetical protein alr1529 {Nostoc sp. pcc 7120 98.85
d2hsja1211 Uncharacterized protein SP1450 {Streptococcus pneu 98.82
d1es9a_212 Platelet-activating factor acetylhydrolase {Cow (B 98.82
d1fxwf_212 Platelet-activating factor acetylhydrolase {Cow (B 98.67
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: Esterase
domain: Esterase
species: Streptomyces scabies [TaxId: 1930]

Probab=99.65  E-value=2e-16  Score=145.47  Aligned_cols=221  Identities=11%  Similarity=-0.027  Sum_probs=116.8

Q ss_pred             CCCcHHHHHHHhhCCCCCCCCCCCCCCCCCCCCCcceeeecccccCCCCCCc--ccccCHHHHHHHHHHHHHHHHHhhCc
Q 036887           77 NGKTFVDFIGKIMGLPYPLAFADPNTNGARLLGGVNYASAAAGILDETGQHY--GQRYTLSQQVLNFESTLNQLRGIMGA  154 (366)
Q Consensus        77 nG~~w~d~la~~lg~~~~p~y~~~~~~~~~~~~g~NfA~gGA~~~~~~~~~~--~~~~~l~~Qv~~f~~~~~~~~~~~G~  154 (366)
                      .+..|+++||+.|+.....           ...-.|||.+||++.+-.....  ........|++..             
T Consensus        34 s~~~y~~~la~~l~~~~~~-----------~~~~~n~a~sGatt~~~~~~~~~~~~~~~~~~Q~~~l-------------   89 (302)
T d1esca_          34 AKENYPAVATRSLADKGIT-----------LDVQADVSCGGALIHHFWEKQELPFGAGELPPQQDAL-------------   89 (302)
T ss_dssp             BTTCHHHHHHHHHHTTTCE-----------EEEEEECCCTTCCGGGGTSCEECGGGCCEECCGGGGC-------------
T ss_pred             CCcCHHHHHHHHhccccCC-----------ceeEEEeeecccchhhhhccccccccccchhhhhhhc-------------
Confidence            3678999999999865211           1123799999999765433210  0111111233211             


Q ss_pred             hhhhhhcCCcEEEEEeccchhhhhhcCC-----ccc----C------CCCc---------cChh----hHHHHHHHHHHH
Q 036887          155 SNLTNYLSKSIAIMVFGSNDYINNYLMP-----SIY----S------SSFY---------YNPS----QYANLLLNHYAR  206 (366)
Q Consensus       155 ~~~~~~~~~sL~~i~iG~ND~~~~~~~~-----~~~----~------~~~~---------~~~~----~~v~~~v~~i~~  206 (366)
                           ....+|++|+||+||+....+..     ...    .      ....         ....    ..++.+..++.+
T Consensus        90 -----~~~~dlVtl~iGgND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  164 (302)
T d1esca_          90 -----KQDTQLTVGSLGGNTLGFNRILKQCSDELRKPSLLPGDPVDGDEPAAKCGEFFGTGDGKQWLDDQFERVGAELEE  164 (302)
T ss_dssp             -----CTTCCEEEECCCHHHHTHHHHHHHTCTTTTSSCSSCCCCSSTTSCGGGHHHHTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCCCEEEEecCCcccchhhhhhhhhhccccccccccccccccccccccccccccchhhhhhHHHHHHHHHHHHH
Confidence                 12467999999999985321000     000    0      0000         0001    123344455555


Q ss_pred             HHHHHHHc-CCcEEEEcCCCCCCC---ccCCCCCCCC-------CCCCchhhhhhhhHHHHHHHHHHHHHhhcCCCceEE
Q 036887          207 QLLALYSV-GLRNFFLAGIGPLGC---IPNQRGSGQA-------PPGRCVDYVNQILGPFNEGLRSLVDQLNKRPGAMFV  275 (366)
Q Consensus       207 ~v~~L~~~-GAr~~vv~~lpplg~---~P~~~~~~~~-------~~~~~~~~~n~~~~~~N~~L~~~l~~l~~~~~~~i~  275 (366)
                      .++++.+. .--+|++++.|++.-   .|........       -...-...++.+.+.+|..+++..++.      .+.
T Consensus       165 ~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~~~------~v~  238 (302)
T d1esca_         165 LLDRIGYFAPDAKRVLVGYPRLVPEDTTKCLTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAADG------GAD  238 (302)
T ss_dssp             HHHHHHHHSTTCEEEEECCCCCSCSCGGGGGSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHHTT------TCE
T ss_pred             HHHHHHHHCCCCeEEEecCcccccccCCcccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHc------CCE
Confidence            55555544 233688888886421   0000000000       011223455667777888777654432      367


Q ss_pred             EecchhhHHHHHhCCCCCCCcccCccccCC-cccCCccccCCCCcCCCCCCCcEEecCCChhHHHHHHHHHHHhcC
Q 036887          276 YGNTYGSVGDILNNPATFGFNVVDRACCGI-GRNQGQITCLPFAMPCFNRNQYVFWDAFHPTEAVNAILARRAVYG  350 (366)
Q Consensus       276 ~~D~~~~~~~ii~nP~~yGf~n~~~aCc~~-g~~~~~~~C~~~~~~C~~p~~ylfwD~vHPT~~~h~~iA~~~~~~  350 (366)
                      ++|++..|.              ...+|.. ..+.    .+.......++..+++||.+|||++||++||+.+.+.
T Consensus       239 ~vd~~~~f~--------------~~~~c~~~~~~~----~~~~~~~~~~~~~~~~~d~~HPn~~G~~~iA~~i~~~  296 (302)
T d1esca_         239 FVDLYAGTG--------------ANTACDGADRGI----GGLLEDSQLELLGTKIPWYAHPNDKGRDIQAKQVADK  296 (302)
T ss_dssp             EECTGGGCT--------------TSSTTSTTSCSB----CCSSSEEEEESSSCEEECSSCBCHHHHHHHHHHHHHH
T ss_pred             EEechhhhc--------------cccccccccccc----cccccccccccccccccCCcCCCHHHHHHHHHHHHHH
Confidence            889998642              1123321 1100    0001112335788999999999999999999999874
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} Back     information, alignment and structure
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Back     information, alignment and structure
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} Back     information, alignment and structure