Citrus Sinensis ID: 036910

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA
cccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccEEEccEEEcccccHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccEEEEEEEccccccccEEEEEcccccccccccEEEEEcccccccccccccccccc
*****QLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEM***FATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA
xxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MARPVQLVSSVILLLCCAAAASASASSFDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNISPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Thiol protease aleurain-like probableQ8RWQ9
Oryzain gamma chain probableP25778
Cysteine proteinase 2 Involved in the degradation of the storage protein zein. May play a role in proteolysis during emergencies.probableQ10717

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.4.-.-Acting on peptide bonds (peptide hydrolases).probable
3.4.22.-Cysteine endopeptidases.probable
3.4.22.16Cathepsin H.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QJ3, chain A
Confidence level:very confident
Coverage over the Query: 59-313
View the alignment between query and template
View the model in PyMOL