Citrus Sinensis ID: 036968
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| 356553583 | 355 | PREDICTED: uncharacterized protein LOC10 | 0.917 | 0.909 | 0.715 | 1e-137 | |
| 356567743 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.950 | 0.646 | 1e-136 | |
| 388523085 | 367 | unknown [Lotus japonicus] | 0.971 | 0.931 | 0.653 | 1e-135 | |
| 359485318 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.974 | 0.971 | 0.654 | 1e-134 | |
| 356567386 | 352 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.977 | 0.652 | 1e-134 | |
| 356566157 | 426 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.802 | 0.639 | 1e-134 | |
| 255637255 | 352 | unknown [Glycine max] | 0.977 | 0.977 | 0.652 | 1e-133 | |
| 356567745 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.952 | 0.631 | 1e-132 | |
| 255551531 | 360 | conserved hypothetical protein [Ricinus | 0.980 | 0.958 | 0.629 | 1e-131 | |
| 357459321 | 351 | hypothetical protein MTR_3g049330 [Medic | 0.971 | 0.974 | 0.632 | 1e-130 |
| >gi|356553583|ref|XP_003545134.1| PREDICTED: uncharacterized protein LOC100799085 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/327 (71%), Positives = 262/327 (80%), Gaps = 4/327 (1%)
Query: 25 HGCDFYQGNWVYDSSCSLYTTSKDCPFIEKEFDCQRNGRPDNDYLKYTWQPTGCNLPRFN 84
GCD +QGNWV D S LY TS +CPFI KEFDCQ+NGRPD Y+KY WQP CNLPRFN
Sbjct: 32 RGCDLFQGNWVVDDSYPLYNTS-ECPFILKEFDCQKNGRPDKLYVKYRWQPKDCNLPRFN 90
Query: 85 GEDFLQRFRGKSIMFVGDSLGLNQWQSLTCMLHKAVPNATYKLTRTGGLSTFIFPRYNTK 144
GEDFL+R RGK+I+FVGDSL LNQWQSLTCMLH AVP A Y RTGGLSTFIFP Y+ K
Sbjct: 91 GEDFLRRLRGKNILFVGDSLSLNQWQSLTCMLHTAVPLAKYTSVRTGGLSTFIFPSYDVK 150
Query: 145 VMFSRNAFLVDIVQTSAGRVLKLGSIESGKLWEQNDVLIFNSWHWWLHTGRKQPWDFIEI 204
VMFSRNAFLVDI S GRVLKL SIE+GK+W+ N +LIF+SWHWWLH GRKQPWDFI+
Sbjct: 151 VMFSRNAFLVDIASESIGRVLKLDSIEAGKIWKGNHILIFDSWHWWLHIGRKQPWDFIQE 210
Query: 205 GDEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWGQPKVKSCT 264
G+ KDM+RL+AYEK L TWA WVE+N+DP KT VFFQGVSPDH NGA WG+P+ SC
Sbjct: 211 GNRTFKDMNRLVAYEKGLKTWAKWVEDNVDPNKTRVFFQGVSPDHLNGAKWGEPRA-SCE 269
Query: 265 KETEPVIGSSYPGGKHKAEIVLEKVINKMSKLEAVNLLNITTLSQLRKDGHPSFYGTGGH 324
++ PV G YPGG H AE+VL+KV+ MSK VNLLNITTLSQ+RKDGHPS YG GGH
Sbjct: 270 EQKVPVDGFKYPGGSHPAELVLQKVLGAMSK--RVNLLNITTLSQMRKDGHPSVYGYGGH 327
Query: 325 STPDCSHWCLPGVPDTWNHLLYATIIQ 351
DCSHWCLPGVPDTWN LLYA +IQ
Sbjct: 328 RDMDCSHWCLPGVPDTWNLLLYAALIQ 354
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356567743|ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|388523085|gb|AFK49604.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|359485318|ref|XP_002278078.2| PREDICTED: uncharacterized protein LOC100267770 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356567386|ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356566157|ref|XP_003551301.1| PREDICTED: uncharacterized protein LOC100785226 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255637255|gb|ACU18958.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356567745|ref|XP_003552077.1| PREDICTED: uncharacterized protein LOC100810868 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|255551531|ref|XP_002516811.1| conserved hypothetical protein [Ricinus communis] gi|223543899|gb|EEF45425.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357459321|ref|XP_003599941.1| hypothetical protein MTR_3g049330 [Medicago truncatula] gi|355488989|gb|AES70192.1| hypothetical protein MTR_3g049330 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 352 | ||||||
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.914 | 0.904 | 0.564 | 3.7e-103 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.903 | 0.885 | 0.549 | 2e-102 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.903 | 0.866 | 0.544 | 7.9e-101 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.900 | 0.834 | 0.539 | 5e-99 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.917 | 0.887 | 0.524 | 3.2e-97 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.900 | 0.823 | 0.529 | 8.4e-97 | |
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.911 | 0.798 | 0.486 | 9.1e-84 | |
| TAIR|locus:2149947 | 485 | TBL5 "AT5G20590" [Arabidopsis | 0.906 | 0.657 | 0.420 | 8e-69 | |
| TAIR|locus:2096094 | 475 | TBL6 "AT3G62390" [Arabidopsis | 0.903 | 0.669 | 0.395 | 7.4e-66 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.838 | 0.741 | 0.440 | 1.2e-65 |
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 185/328 (56%), Positives = 226/328 (68%)
Query: 26 GCDFYQGNWVYDSSCSLYTTSKDCPFIEKEFDCQRNGRPDNDYLKYTWQPTGCNLPRFNG 85
GCD + G WV D S LY +S CPFI EF CQRNGRPD DY + WQP C L RFNG
Sbjct: 33 GCDMFTGRWVKDDSYPLYNSST-CPFIRHEFSCQRNGRPDLDYSTFRWQPLSCKLARFNG 91
Query: 86 EDFLQRFRGKSIMFVGDSLGLNQWQSLTCMLHKAVPNATYKLTRTGGLSTFIFPRYNTKV 145
FL++ +GK IMFVGDSL LNQWQSL CMLH +VPN+TY LT G +ST+ F Y ++
Sbjct: 92 LQFLKKNKGKKIMFVGDSLSLNQWQSLACMLHSSVPNSTYTLTTQGSISTYTFKEYGLEL 151
Query: 146 MFSRNAFLVDIVQTSAGRVLKLGSIESGKLWEQNDVLIFNSWHWWLHTGRKQPWDFIEIG 205
RN +LVDIV+ GRVLKL SI GK W + D LIFN+WHWW G QPWD I+IG
Sbjct: 152 KLDRNVYLVDIVREKIGRVLKLDSINDGKNWVEMDTLIFNTWHWWSRRGPAQPWDLIQIG 211
Query: 206 DEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWGQPKVKSCTK 265
+ KDMDR+ A+E AL TW WV+ ++ KT VFFQG+SP H G WG+P KSC
Sbjct: 212 TNVTKDMDRVAAFEIALGTWGKWVDTVLNTKKTRVFFQGISPSHYKGVLWGEPAAKSCVG 271
Query: 266 ETEPVIGSSYPGGKHKAEI-VLEKVINKMSKLEAVNLLNITTLSQLRKDGHPSFYGTGG- 323
+ EP++G+ YPGG AE+ VL++ + K+SK V LL+IT LS LRKD HPS YG GG
Sbjct: 272 QKEPLLGTKYPGGL-PAEVGVLKRALGKISK--PVTLLDITMLSLLRKDAHPSVYGLGGR 328
Query: 324 HSTPDCSHWCLPGVPDTWNHLLYATIIQ 351
+S+ DCSHWCL GVPDTWN +LY +++
Sbjct: 329 NSSGDCSHWCLSGVPDTWNEILYNYMVE 356
|
|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149947 TBL5 "AT5G20590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096094 TBL6 "AT3G62390" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 352 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 1e-126 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-107 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 3e-24 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 367 bits (943), Expect = e-126
Identities = 165/338 (48%), Positives = 210/338 (62%), Gaps = 18/338 (5%)
Query: 27 CDFYQGNWVYDSSCSLYTTSKDCP-FIEKEFDCQRNGRPDNDYLKYTWQPTGCNLPRFNG 85
C + G WV D S LY +S DCP I+ EF+CQ GRPD+DYLKY WQP C LPRFNG
Sbjct: 53 CALFVGTWVRDDSYPLYQSS-DCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNG 111
Query: 86 EDFLQRFRGKSIMFVGDSLGLNQWQSLTCMLHKAVPNATYKLTRTGGLSTFIFPRYNTKV 145
+FL + +GK++MFVGDSLG NQW+SL C++ +VP+ +++R LSTF F Y +
Sbjct: 112 LEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSI 171
Query: 146 MFSRNAFLVDIVQTSAGRVLKLGSIE-SGKLWEQNDVLIFNSWHWWLHTGRKQPWDFIEI 204
F + +LVDI RVLKL I + W DVLIFN+ HWW H G Q WD+IE
Sbjct: 172 SFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIES 231
Query: 205 GDEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWGQPKV---K 261
G +DMDRL+A EKAL TWA WV+ N+D ++T VFFQ +SP H N ++W K
Sbjct: 232 GGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTTK 291
Query: 262 SCTKETEPVIGSSYPGGKHKAEIVLEKVINKMSKLEAVNLLNITTLSQLRKDGHPSFYGT 321
+C ET P+ G +YPG V+++VI M LL+IT LS+LRKDGHPS Y +
Sbjct: 292 NCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHN--PAYLLDITLLSELRKDGHPSIY-S 348
Query: 322 GGHS---------TPDCSHWCLPGVPDTWNHLLYATII 350
G S + DCSHWCLPG+PDTWN L Y +
Sbjct: 349 GDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.58 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 97.0 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 96.88 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 96.38 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 95.86 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 95.07 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 94.73 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 93.69 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 91.52 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 88.97 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 88.4 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 87.36 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 82.35 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 81.22 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-113 Score=831.49 Aligned_cols=326 Identities=50% Similarity=0.998 Sum_probs=300.4
Q ss_pred hcCCCCCCcccceeeCCCCCCCCCCCCCC-CCccccccccCCCCCCcccccceecCCCCCCCCChHHHHHHhcCCeEEEE
Q 036968 22 IHGHGCDFYQGNWVYDSSCSLYTTSKDCP-FIEKEFDCQRNGRPDNDYLKYTWQPTGCNLPRFNGEDFLQRFRGKSIMFV 100 (352)
Q Consensus 22 ~~~~~Cd~~~G~WV~d~~~p~Y~~~~~Cp-~i~~~~~C~~nGRpd~~y~~wrWqP~~C~L~~fd~~~fl~~lrgk~i~Fv 100 (352)
.+.++||+|+|+||+|+++|+|+ +++|| ||++++||++|||||++|++|||||++|+||||||.+||++||||+|+||
T Consensus 48 ~~~~~CD~f~G~WV~D~s~PlY~-~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FV 126 (387)
T PLN02629 48 ANQSTCALFVGTWVRDDSYPLYQ-SSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFV 126 (387)
T ss_pred CCccccCCCCCeEecCCCCCCCC-CCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEe
Confidence 44578999999999999999999 99999 99999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHHHHhhccCCCcceeeeecCCeeEEEeccCCeEEEEEecccccccccccCCceeeecccccC-CCcccc
Q 036968 101 GDSLGLNQWQSLTCMLHKAVPNATYKLTRTGGLSTFIFPRYNTKVMFSRNAFLVDIVQTSAGRVLKLGSIESG-KLWEQN 179 (352)
Q Consensus 101 GDSl~Rn~~~SL~clL~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wspfLv~~~~~~~~~~l~lD~~~~~-~~~~~~ 179 (352)
||||+|||||||+|||++++|...+...++++..+|+|++||+||+||||||||+.+.....+.|+||+++.. +.|.++
T Consensus 127 GDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~ 206 (387)
T PLN02629 127 GDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFLDYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDA 206 (387)
T ss_pred ccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEeccCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccC
Confidence 9999999999999999998887665566677889999999999999999999999877666679999999864 889999
Q ss_pred cEEEEeccccccccCCCCCcceeecCccccccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCCCC
Q 036968 180 DVLIFNSWHWWLHTGRKQPWDFIEIGDEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWGQPK 259 (352)
Q Consensus 180 DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~l~~~~~~Vf~Rt~sP~Hf~~g~W~~g~ 259 (352)
|||||||||||.+.+..++++|++.|+.++++|++.+||++||+||++||++++++.+++|||||+||+|||||+||+|+
T Consensus 207 DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg 286 (387)
T PLN02629 207 DVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGA 286 (387)
T ss_pred CEEEEeCccccCCCCeeEEeeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCC
Confidence 99999999999998888889999999999999999999999999999999999988899999999999999999999983
Q ss_pred ---CcCCCCCcccCCCCCCCCCcchHHHHHHHHHHHhccCCceEEeecccccccccCCCCCCCCCC--------CCCCCC
Q 036968 260 ---VKSCTKETEPVIGSSYPGGKHKAEIVLEKVINKMSKLEAVNLLNITTLSQLRKDGHPSFYGTG--------GHSTPD 328 (352)
Q Consensus 260 ---~g~C~~~t~P~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~lLDit~ms~~R~D~Hp~~y~~~--------~~~~~D 328 (352)
+|+|+++|+|+.++++.++...+++++++++++++. +|++||||.||++|||||||+|+.. +..++|
T Consensus 287 ~~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~~~~~--~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~D 364 (387)
T PLN02629 287 STTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIRGMHN--PAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSAD 364 (387)
T ss_pred CCCCCCCccCCccCcCccccCcchHHHHHHHHHHHhcCC--ceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCC
Confidence 368999999999777766666677899999998876 8999999999999999999999632 134689
Q ss_pred cccccCCCchhHHHHHHHHHHh
Q 036968 329 CSHWCLPGVPDTWNHLLYATII 350 (352)
Q Consensus 329 C~HWClPG~~D~Wn~lL~~~L~ 350 (352)
|+||||||||||||||||++|+
T Consensus 365 C~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 365 CSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cccccCCCCCccHHHHHHHHHh
Confidence 9999999999999999999997
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 352 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 71/416 (17%), Positives = 117/416 (28%), Gaps = 143/416 (34%)
Query: 23 HGHGCDFYQGNWVYDSSCSLYTTSKDC------PFIEKEFDCQRNGRPD-NDYLKYTWQP 75
H H DF G Y KD F+ FDC+ D D K
Sbjct: 3 HHHHMDFETGEHQY--------QYKDILSVFEDAFV-DNFDCK-----DVQDMPKSILSK 48
Query: 76 TGC----NLP-RFNGEDFL---QRFRGKSI--MFVGDSLGLN-QWQSLTCMLH-----KA 119
+G L + + + FV + L +N ++ L + +
Sbjct: 49 EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF--LMSPIKTEQRQPS 106
Query: 120 VPNATYKLTRTGGLSTF-IFPRYNT----KVMFSRNAFLVDIVQTSAGRVLKLGSIESGK 174
+ Y R + +F +YN + R A L A VL G + SGK
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL---RPAKNVLIDGVLGSGK 163
Query: 175 LWEQNDVL------------IFNSWHWWLHTGRKQ-PWDFIEIGDEMIKDMD-------- 213
W DV IF WL+ P +E+ +++ +D
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIF-----WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 214 -----------------RLLA---YEKAL----NTWANWVENNIDPT-KTEVFFQGVSPD 248
RLL YE L N N + + K + +
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL----TTRF 274
Query: 249 HANGADWGQPKVKSCTKETEPVIGSSYPG-GKHKAEIVLEKVIN-KMSKL--EA--VNLL 302
D S T + + + +L K ++ + L E N
Sbjct: 275 -KQVTD-----FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328
Query: 303 NITTLSQLRKDGHPSFYGTGGHSTPDCSHWCLPGVPDTWNHLLY------ATIIQI 352
++ +++ +DG TW++ + TII+
Sbjct: 329 RLSIIAESIRDG-----------------------LATWDNWKHVNCDKLTTIIES 361
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.47 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 95.86 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 95.27 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 84.14 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 82.92 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00019 Score=62.33 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=67.8
Q ss_pred cccEEEEeccccccccCCCCCcceeecCccccccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 036968 178 QNDVLIFNSWHWWLHTGRKQPWDFIEIGDEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWGQ 257 (352)
Q Consensus 178 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~l~~~~~~Vf~Rt~sP~Hf~~g~W~~ 257 (352)
.+|+||++.|..=... -.+.|++.|+.+++.+.+. .++++|++-+..|....
T Consensus 74 ~pd~Vvi~~G~ND~~~--------------------~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~------ 125 (200)
T 4h08_A 74 KFDVIHFNNGLHGFDY--------------------TEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTG------ 125 (200)
T ss_dssp CCSEEEECCCSSCTTS--------------------CHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEES------
T ss_pred CCCeEEEEeeeCCCCC--------------------CHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCccc------
Confidence 4799999999652110 1467888898888877653 35778999998885311
Q ss_pred CCCcCCCCCcccCCCCCCCCCcchHHHHHHHHHHHhccCCceEEeecccccccccCCCCCCCCCCCCCCCCcccccCCCc
Q 036968 258 PKVKSCTKETEPVIGSSYPGGKHKAEIVLEKVINKMSKLEAVNLLNITTLSQLRKDGHPSFYGTGGHSTPDCSHWCLPGV 337 (352)
Q Consensus 258 g~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~lLDit~ms~~R~D~Hp~~y~~~~~~~~DC~HWClPG~ 337 (352)
.... ...........++++++++.++. ++.++|++..+.- |+..+. ..|-+|.---|
T Consensus 126 --------~~~~-~~~~~~~~~~~~n~~~~~~a~~~----~v~~iD~~~~~~~----~~~~~~-----~~Dg~Hpn~~G- 182 (200)
T 4h08_A 126 --------EGMK-EFAPITERLNVRNQIALKHINRA----SIEVNDLWKVVID----HPEYYA-----GGDGTHPIDAG- 182 (200)
T ss_dssp --------GGGC-EECTHHHHHHHHHHHHHHHHHHT----TCEEECHHHHHTT----CGGGTT-----TSCSSSCCHHH-
T ss_pred --------cccc-ccchhHHHHHHHHHHHHHHhhhc----ceEEEecHHhHhc----CHHHhc-----CCCCCCCCHHH-
Confidence 0000 00000000112345555554432 6999999876643 233221 25777765444
Q ss_pred hhHHHHHHHHHHh
Q 036968 338 PDTWNHLLYATII 350 (352)
Q Consensus 338 ~D~Wn~lL~~~L~ 350 (352)
...|-+.+...|.
T Consensus 183 y~~~A~~i~~~i~ 195 (200)
T 4h08_A 183 YSALANQVIKVIK 195 (200)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3455555555543
|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 352 | |||
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 97.37 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 97.3 | |
| d2hsja1 | 211 | Uncharacterized protein SP1450 {Streptococcus pneu | 93.56 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 84.3 |
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=97.37 E-value=0.00014 Score=61.44 Aligned_cols=92 Identities=8% Similarity=0.029 Sum_probs=48.4
Q ss_pred ccccEEEEeccccccccCCCCCcceeecCccccccccHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCC
Q 036968 177 EQNDVLIFNSWHWWLHTGRKQPWDFIEIGDEMIKDMDRLLAYEKALNTWANWVENNIDPTKTEVFFQGVSPDHANGADWG 256 (352)
Q Consensus 177 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~l~~~~~~Vf~Rt~sP~Hf~~g~W~ 256 (352)
+..|+||+..|.-=. ...+. ...+.|+..++.+++-+.+ ....+++-+..|. +..
T Consensus 70 ~~~D~vvi~~G~ND~----------~~~~~------~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~~-~~~---- 124 (208)
T d2o14a2 70 KPGDYFMLQLGINDT----------NPKHK------ESEAEFKEVMRDMIRQVKA----KGADVILSTPQGR-ATD---- 124 (208)
T ss_dssp CTTCEEEEECCTGGG----------CGGGC------CCHHHHHHHHHHHHHHHHT----TTCEEEEECCCCC-TTC----
T ss_pred CCCCEEEEEcCCCcc----------ccccc------ccHHHHHHHHHHHHHHHHh----cCCceeecccccc-ccc----
Confidence 456999999985421 00011 1256788888888887643 2344555443332 110
Q ss_pred CCCCcCCCCCcccCCCCCCCCCcchHHHHHHHHHHHhccCCceEEeecccccc
Q 036968 257 QPKVKSCTKETEPVIGSSYPGGKHKAEIVLEKVINKMSKLEAVNLLNITTLSQ 309 (352)
Q Consensus 257 ~g~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~lLDit~ms~ 309 (352)
... . .+ .......++.+++++.++. ++.++|++.++.
T Consensus 125 ----~~~-~--~~-----~~~~~~~~~~~~~~~a~~~----~v~~vD~~~~~~ 161 (208)
T d2o14a2 125 ----FTS-E--GI-----HSSVNRWYRASILALAEEE----KTYLIDLNVLSS 161 (208)
T ss_dssp ----BCT-T--SC-----BCCTTSTTHHHHHHHHHHT----TCEEECHHHHHH
T ss_pred ----ccc-c--cc-----hHHHHHHHHHHHHHhhccC----CcEEeccHHHHH
Confidence 000 0 00 0011123456677766554 589999987764
|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|